Rh4AG077700

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Forward (+)
15798185 .. 15803600
5416 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG077700.1

Sequence Viewer

Length: 1305 bp
ATGGGGATTTGTTTCAGTGAACACAAGAAGGAATCCAAGTTATCCAAGTTTACTCAGAAAGCCCAACAAGGATATGACTCCTCGGTATCTCAAGCTCACCCGGATAGAACACCATACGATACTCCTTTGGTTACAAAGAATATCAAAGACCTCCGCCAAAGTCCAGGATATATCAATGTCAACATCTTTACTCACGATGAGATGAGGTTGGCCACAAAAAATTTCAGGTCAGATCTGATTCTCGGTGAAGGTGGGTTTGGAATTGTATACAAAGGAGTCATTGATGACACTGTGAGGCCCGGTTACACGTCCACACAAGTTGCCATTAAGGAGCTTAACCCAGAAGGGTACCAAGGTGATAGGGAATGGCTGGCTGAAGTACACTACTTGGGACAGTTCAGTCATCCTAATCTTGTGAGGCTGATTGGGTACTGTTGTGAGGATGACCACCGCCAATTGGTCTATGAATACATGGCAAGTGGCAGCTTGGAAAAACATCTTTTCCGCAGAGTGGGTTGTACGCTTACATGGACAAGAAGAATGAAGATTGCCTTAGATGCTGCAAAAGGACTTGCTTTTCTTCATGGTGCTGAAAGGCCAGTCATTTACCGTGACTTCAAGACATCAAACATTTTGTTGGATGCGGATTTTAATGCGAAGCTTTCAGACTTTGGCCTTGCAAAGGAAGGACCGATGGGAGACCAAACCCATGTTTCAACACGAGTGATGGGAACATACGGATATGCTGCTCCTGAGTATGTAATGACTGGGCATCTAACGGCTCGAAGCGATGTTTATGGATTTGGAGTAGTGCTACTTGAGATGCTCATTGGAAGGAGAGCAATGGATAAGAGCAGGCCCAGCCGAGAACATAATCTAGTTGAATGGGCTCGGCCACTCTTGAATCACAATAAGAAACTTTTGAGGATTGTAGACCCTCGACTGGAAGGGCAGTACTCACTTAAAACTGCACTGAAGGTGGCCCATCTAGCATACCAATGCCTTAGCCAGAACCCGAAAGGGAGACCCCTTATGAGCCAGGTTGTTGAAATCCTTGAGAGTCTTCAAGCACCAGAACAGCATGACCCTTTGCTTCAAAGTGGAGGTAAAGCGGTAACTCTTTATGAGGCTCCCAAGGGAACCTCTGGAACTCATGCTAAGAGAGATGTAAATGGAAAAGATGGTGGAGGGGGAGGAGAGGTAAGGCGAAGGAGCAACCGGGGAAATGAAGGGAGCCACAGTGAGCCTATGAGTGATCATGATCATCATAGCCCGTCCCCAAGTTTTGTGTCTCGGGAAAAGTAA

Protein Analysis

434

Amino Acids

48.57

Weight (kDa)

8.85

Isoelectric Point (pI)

40.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 80 - 352 6.7e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 80 - 349 9.4e-44 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012008)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 399
Acc65I GGTACC 1 cut(s) 348
AccB1I GGYRCC 1 cut(s) 348
AccI GTMKAC 2 cut(s) 267, 933
AciI CCGC 5 cut(s) 154, 451, 505, 644, 1112
AcoI YGGCCR 2 cut(s) 210, 893
AcsI RAATTY 1 cut(s) 220
AcuI CTGAAG 2 cut(s) 396, 995
AfaI GTAC 5 cut(s) 350, 381, 431, 520, 956
AfiI CCNNNNNNNGG 4 cut(s) 457, 511, 682, 943
AflIII ACRYGT 1 cut(s) 306
AgsI TTSAA 7 cut(s) 619, 717, 884, 904, 1049, 1067, 1097
AjiI CACGTC 1 cut(s) 309
AjnI CCWGG 2 cut(s) 163, 1038
AjuI GAANNNNNNNTTGG 2 cut(s) 240, 272
AluBI AGCT 4 cut(s) 95, 334, 486, 661
AluI AGCT 4 cut(s) 95, 334, 486, 661
Alw26I GTCTC 3 cut(s) 693, 1018, 1296
Ama87I CYCGRG 1 cut(s) 1293
AoxI GGCC 7 cut(s) 210, 296, 596, 673, 857, 893, 981
ApeKI GCWGC 3 cut(s) 483, 560, 746
ApoI RAATTY 1 cut(s) 220
Asp718I GGTACC 1 cut(s) 348
AspS9I GGNCC 4 cut(s) 297, 689, 858, 982
AsuC2I CCSGG 3 cut(s) 101, 300, 1220
AsuHPI GGTGA 3 cut(s) 89, 257, 368
AvaI CYCGRG 1 cut(s) 1293
AvaII GGWCC 1 cut(s) 689
BaeI ACNNNNGTAYC 4 cut(s) 340, 373, 421, 454
BalI TGGCCA 1 cut(s) 212
BanI GGYRCC 1 cut(s) 348
BanII GRGCYC 1 cut(s) 892
BauI CACGAG 1 cut(s) 720
BbsI GAAGAC 1 cut(s) 1055
BbvI GCAGC 3 cut(s) 495, 547, 733
BccI CCATC 4 cut(s) 688, 721, 993, 1175
BceAI ACGGC 1 cut(s) 795
BciT130I CCWGG 2 cut(s) 165, 1040
BclI TGATCA 2 cut(s) 1255, 1261
BcnI CCSGG 3 cut(s) 101, 300, 1220
BcoDI GTCTC 3 cut(s) 693, 1018, 1296
BfaI CTAG 2 cut(s) 878, 989
BglII AGATCT 1 cut(s) 232
BisI GCNGC 3 cut(s) 484, 561, 747
BlsI GCNGC 3 cut(s) 485, 562, 748
BmcAI AGTACT 1 cut(s) 956
Bme1390I CCNGG 5 cut(s) 101, 165, 300, 1040, 1220
Bme18I GGWCC 1 cut(s) 689
BmeT110I CYCGRG 1 cut(s) 1293
BmgBI CACGTC 1 cut(s) 309
BmgT120I GGNCC 4 cut(s) 297, 689, 858, 982
BmiI GGNNCC 4 cut(s) 350, 1131, 1141, 1235
BmrFI CCNGG 5 cut(s) 101, 165, 300, 1040, 1220
BmrI ACTGGG 1 cut(s) 777
BmsI GCATC 4 cut(s) 547, 631, 781, 813
BmuI ACTGGG 1 cut(s) 777
BpiI GAAGAC 1 cut(s) 1055
Bpu10I CCTNAGC 1 cut(s) 1004
BpuEI CTTGAG 3 cut(s) 75, 839, 1076
BpuMI CCSGG 3 cut(s) 101, 300, 1220
BsaBI GATNNNNATC 1 cut(s) 1260
BsaI GGTCTC 2 cut(s) 693, 1018
BsaJI CCNNGG 4 cut(s) 81, 352, 1134, 1219
BsaXI ACNNNNNCTCC 4 cut(s) 1185, 1215, 1225, 1255
Bsc4I CCNNNNNNNGG 4 cut(s) 457, 511, 682, 943
Bse1I ACTGG 3 cut(s) 599, 772, 948
Bse3DI GCAATG 1 cut(s) 849
Bse8I GATNNNNATC 1 cut(s) 1260
BseBI CCWGG 2 cut(s) 165, 1040
BseDI CCNNGG 4 cut(s) 81, 352, 1134, 1219
BseGI GGATG 3 cut(s) 403, 448, 646
BseJI GATNNNNATC 1 cut(s) 1260
BseLI CCNNNNNNNGG 4 cut(s) 457, 511, 682, 943
BseMI GCAATG 1 cut(s) 849
BseMII CTCAG 2 cut(s) 68, 744
BseNI ACTGG 3 cut(s) 599, 772, 948
BseRI GAGGAG 2 cut(s) 70, 1209
BseXI GCAGC 3 cut(s) 495, 547, 733
BseYI CCCAGC 1 cut(s) 860
BsgI GTGCAG 1 cut(s) 954
BshFI GGCC 7 cut(s) 212, 298, 598, 675, 859, 895, 983
BshNI GGYRCC 1 cut(s) 348
BsiHKCI CYCGRG 1 cut(s) 1293
BsiSI CCGG 3 cut(s) 101, 300, 1219
BslFI GGGAC 2 cut(s) 405, 1261
BslI CCNNNNNNNGG 4 cut(s) 457, 511, 682, 943
BsmAI GTCTC 3 cut(s) 693, 1018, 1296
BsmFI GGGAC 2 cut(s) 405, 1261
BsnI GGCC 7 cut(s) 212, 298, 598, 675, 859, 895, 983
Bso31I GGTCTC 2 cut(s) 693, 1018
BsoBI CYCGRG 1 cut(s) 1293
Bsp1286I GDGCHC 1 cut(s) 892
Bsp143I GATC 3 cut(s) 232, 1255, 1261
BspACI CCGC 5 cut(s) 154, 451, 505, 644, 1112
BspANI GGCC 7 cut(s) 212, 298, 598, 675, 859, 895, 983
BspCNI CTCAG 2 cut(s) 67, 745
BspHI TCATGA 1 cut(s) 1258
BspLI GGNNCC 4 cut(s) 350, 1131, 1141, 1235
BspT107I GGYRCC 1 cut(s) 348
BspTNI GGTCTC 2 cut(s) 693, 1018
BsrDI GCAATG 1 cut(s) 849
BsrI ACTGG 3 cut(s) 599, 772, 948
BssECI CCNNGG 4 cut(s) 81, 352, 1134, 1219
BssMI GATC 3 cut(s) 232, 1255, 1261
BssNAI GTATAC 1 cut(s) 268
BssSI CACGAG 1 cut(s) 720
BssT1I CCWWGG 2 cut(s) 352, 1134
Bst1107I GTATAC 1 cut(s) 268
Bst2BI CACGAG 1 cut(s) 720
Bst2UI CCWGG 2 cut(s) 165, 1040
Bst4CI ACNGT 5 cut(s) 292, 396, 434, 611, 1241
BstC8I GCNNGC 2 cut(s) 372, 857
BstDEI CTNAG 5 cut(s) 54, 553, 753, 1004, 1158
BstENI CCTNNNNNAGG 1 cut(s) 680
BstF5I GGATG 3 cut(s) 403, 448, 646
BstKTI GATC 3 cut(s) 235, 1258, 1264
BstMAI GTCTC 3 cut(s) 693, 1018, 1296
BstMBI GATC 3 cut(s) 232, 1255, 1261
BstMWI GCNNNNNNNGC 3 cut(s) 557, 861, 989
BstNI CCWGG 2 cut(s) 165, 1040
BstSCI CCNGG 5 cut(s) 99, 163, 298, 1038, 1218
BstV1I GCAGC 3 cut(s) 495, 547, 733
BstV2I GAAGAC 1 cut(s) 1055
BstX2I RGATCY 1 cut(s) 232
BstYI RGATCY 1 cut(s) 232
BstZ17I GTATAC 1 cut(s) 268
BsuRI GGCC 7 cut(s) 212, 298, 598, 675, 859, 895, 983
BtgZI GCGATG 1 cut(s) 804
BtrI CACGTC 1 cut(s) 309
BtsCI GGATG 3 cut(s) 403, 448, 646
BtsIMutI CAGTG 4 cut(s) 22, 288, 971, 1246
Cac8I GCNNGC 2 cut(s) 372, 857
CciI TCATGA 1 cut(s) 1258
Cfr13I GGNCC 4 cut(s) 297, 689, 858, 982
Csp6I GTAC 5 cut(s) 349, 380, 430, 519, 955
CspCI CAANNNNNGTGG 2 cut(s) 301, 336
CviAII CATG 7 cut(s) 472, 528, 584, 710, 1082, 1154, 1259
CviQI GTAC 5 cut(s) 349, 380, 430, 519, 955
DdeI CTNAG 5 cut(s) 54, 553, 753, 1004, 1158
DpnI GATC 3 cut(s) 234, 1257, 1263
DpnII GATC 3 cut(s) 232, 1255, 1261
DrdI GACNNNNNNGTC 1 cut(s) 399
DseDI GACNNNNNNGTC 1 cut(s) 399
EaeI YGGCCR 2 cut(s) 210, 893
EciI GGCGGA 1 cut(s) 143
Eco130I CCWWGG 2 cut(s) 352, 1134
Eco24I GRGCYC 1 cut(s) 892
Eco31I GGTCTC 2 cut(s) 693, 1018
Eco47I GGWCC 1 cut(s) 689
Eco57I CTGAAG 2 cut(s) 396, 995
Eco88I CYCGRG 1 cut(s) 1293
EcoNI CCTNNNNNAGG 1 cut(s) 680
EcoRII CCWGG 2 cut(s) 163, 1038
EcoT14I CCWWGG 2 cut(s) 352, 1134
EcoT38I GRGCYC 1 cut(s) 892
ErhI CCWWGG 2 cut(s) 352, 1134
FaeI CATG 7 cut(s) 475, 531, 587, 713, 1085, 1157, 1262
FalI AAGNNNNNCTT 2 cut(s) 536, 568
FaqI GGGAC 2 cut(s) 405, 1261
FatI CATG 7 cut(s) 471, 527, 583, 709, 1081, 1153, 1258
FbaI TGATCA 2 cut(s) 1255, 1261
FblI GTMKAC 2 cut(s) 267, 933
Fnu4HI GCNGC 3 cut(s) 484, 561, 747
FokI GGATG 3 cut(s) 390, 455, 653
FriOI GRGCYC 1 cut(s) 892
Fsp4HI GCNGC 3 cut(s) 484, 561, 747
FspBI CTAG 2 cut(s) 878, 989
GluI GCNGC 3 cut(s) 484, 561, 747
GsaI CCCAGC 1 cut(s) 864
HaeIII GGCC 7 cut(s) 212, 298, 598, 675, 859, 895, 983
HapII CCGG 3 cut(s) 101, 300, 1219
Hin1II CATG 7 cut(s) 475, 531, 587, 713, 1085, 1157, 1262
HincII GTYRAC 1 cut(s) 181
HindII GTYRAC 1 cut(s) 181
HindIII AAGCTT 1 cut(s) 659
HinfI GANTC 6 cut(s) 32, 77, 238, 276, 904, 1060
HpaII CCGG 3 cut(s) 101, 300, 1219
HphI GGTGA 3 cut(s) 89, 257, 368
Hpy166II GTNNAC 7 cut(s) 20, 51, 181, 268, 312, 382, 934
Hpy188I TCNGA 4 cut(s) 57, 232, 237, 667
Hpy188III TCNNGA 7 cut(s) 194, 619, 752, 901, 1146, 1259, 1295
Hpy8I GTNNAC 7 cut(s) 20, 51, 181, 268, 312, 382, 934
HpyAV CCTTC 9 cut(s) 22, 242, 338, 680, 828, 941, 970, 1203, 1223
HpyCH4III ACNGT 5 cut(s) 292, 396, 434, 611, 1241
HpyCH4IV ACGT 1 cut(s) 308
HpyCH4V TGCA 3 cut(s) 563, 680, 971
HpyF10VI GCNNNNNNNGC 3 cut(s) 557, 861, 989
HpyF3I CTNAG 5 cut(s) 54, 553, 753, 1004, 1158
HpySE526I ACGT 1 cut(s) 308
Hsp92II CATG 7 cut(s) 475, 531, 587, 713, 1085, 1157, 1262
KpnI GGTACC 1 cut(s) 352
Ksp22I TGATCA 2 cut(s) 1255, 1261
Kzo9I GATC 3 cut(s) 232, 1255, 1261
LmnI GCTCC 5 cut(s) 331, 754, 1135, 1212, 1233
Lsp1109I GCAGC 3 cut(s) 495, 547, 733
LweI GCATC 4 cut(s) 547, 631, 781, 813
MaeI CTAG 2 cut(s) 878, 989
MaeII ACGT 1 cut(s) 308
MaeIII GTNAC 4 cut(s) 130, 302, 611, 1114
MalI GATC 3 cut(s) 234, 1257, 1263
MboI GATC 3 cut(s) 232, 1255, 1261
MboII GAAGA 4 cut(s) 549, 556, 572, 1055
MfeI CAATTG 1 cut(s) 455
MflI RGATCY 1 cut(s) 232
MhlI GDGCHC 1 cut(s) 892
MlsI TGGCCA 1 cut(s) 212
MluCI AATT 3 cut(s) 220, 261, 455
MluNI TGGCCA 1 cut(s) 212
MlyI GAGTC 3 cut(s) 71, 285, 1069
MmeI TCCRAC 1 cut(s) 618
Mox20I TGGCCA 1 cut(s) 212
MscI TGGCCA 1 cut(s) 212
MseI TTAA 4 cut(s) 327, 336, 651, 963
MslI CAYNNNNRTG 1 cut(s) 997
Msp20I TGGCCA 1 cut(s) 212
MspI CCGG 3 cut(s) 101, 300, 1219
MspR9I CCNGG 5 cut(s) 101, 165, 300, 1040, 1220
MunI CAATTG 1 cut(s) 455
MvaI CCWGG 2 cut(s) 165, 1040
MwoI GCNNNNNNNGC 3 cut(s) 557, 861, 989
NciI CCSGG 3 cut(s) 101, 300, 1220
NdeII GATC 3 cut(s) 232, 1255, 1261
NlaIII CATG 7 cut(s) 475, 531, 587, 713, 1085, 1157, 1262
NlaIV GGNNCC 4 cut(s) 350, 1131, 1141, 1235
NmeAIII GCCGAG 2 cut(s) 871, 890
NmuCI GTSAC 1 cut(s) 611
PagI TCATGA 1 cut(s) 1258
PfeI GAWTC 3 cut(s) 32, 238, 904
PfoI TCCNGGA 1 cut(s) 163
PkrI GCNGC 3 cut(s) 485, 562, 748
PleI GAGTC 3 cut(s) 71, 284, 1068
PpsI GAGTC 3 cut(s) 71, 284, 1068
Psp6I CCWGG 2 cut(s) 163, 1038
PspFI CCCAGC 1 cut(s) 860
PspGI CCWGG 2 cut(s) 163, 1038
PspN4I GGNNCC 4 cut(s) 350, 1131, 1141, 1235
PspPI GGNCC 4 cut(s) 297, 689, 858, 982
PsuI RGATCY 1 cut(s) 232
RsaI GTAC 5 cut(s) 350, 381, 431, 520, 956
RsaNI GTAC 5 cut(s) 349, 380, 430, 519, 955
RseI CAYNNNNRTG 1 cut(s) 997
SaqAI TTAA 4 cut(s) 327, 336, 651, 963
SatI GCNGC 3 cut(s) 484, 561, 747
Sau3AI GATC 3 cut(s) 232, 1255, 1261
Sau96I GGNCC 4 cut(s) 297, 689, 858, 982
ScaI AGTACT 1 cut(s) 956
SchI GAGTC 3 cut(s) 71, 285, 1069
ScrFI CCNGG 5 cut(s) 101, 165, 300, 1040, 1220
SduI GDGCHC 1 cut(s) 892
SfaNI GCATC 4 cut(s) 547, 631, 781, 813
SinI GGWCC 1 cut(s) 689
SmiMI CAYNNNNRTG 1 cut(s) 997
SmlI CTYRAG 3 cut(s) 90, 818, 1055
SmoI CTYRAG 3 cut(s) 90, 818, 1055
Sse9I AATT 3 cut(s) 220, 261, 455
SsiI CCGC 5 cut(s) 154, 451, 505, 644, 1112
SspMI CTAG 2 cut(s) 878, 989
StyD4I CCNGG 5 cut(s) 99, 163, 298, 1038, 1218
StyI CCWWGG 2 cut(s) 352, 1134
TaaI ACNGT 5 cut(s) 292, 396, 434, 611, 1241
TaiI ACGT 1 cut(s) 311
TaqI TCGA 2 cut(s) 784, 940
TaqII GACCGA 1 cut(s) 706
TasI AATT 3 cut(s) 220, 261, 455
TatI WGTACW 2 cut(s) 379, 954
TfiI GAWTC 3 cut(s) 32, 238, 904
Tru1I TTAA 4 cut(s) 327, 336, 651, 963
Tru9I TTAA 4 cut(s) 327, 336, 651, 963
TscAI CASTG 4 cut(s) 22, 295, 978, 1246
TseFI GTSAC 1 cut(s) 611
TseI GCWGC 3 cut(s) 483, 560, 746
Tsp45I GTSAC 1 cut(s) 611
TspDTI ATGAA 4 cut(s) 480, 557, 572, 1242
TspGWI ACGGA 1 cut(s) 753
TspRI CASTG 4 cut(s) 22, 295, 978, 1246
VpaK11BI GGWCC 1 cut(s) 689
XagI CCTNNNNNAGG 1 cut(s) 680
XapI RAATTY 1 cut(s) 220
XmiI GTMKAC 2 cut(s) 267, 933
XspI CTAG 2 cut(s) 878, 989
ZrmI AGTACT 1 cut(s) 956
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.