MD13G1231900.v1.1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
Physical Location & Seq
Forward (+)
23029204 .. 23034280
5077 bp
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UTR
Exon/CDS
Intron
MD13G1231900.v1.1.491

Sequence Viewer

Length: 1287 bp
ATGGGGATTTGTTTCAGTTCTGAAAAGGACCAGCATTCCAATTATACACACGCCAGTCCTCAAGGAGATGACTCTGTTGTATCTCAAACTCCTAGTAGAACATCATCAAACACCACTCCTTTGGCTTCCAAGAATGTCAAAGACCTTCGCCAAAGCCCCGGATATATCAATGTCAGCATCTTTACTTACGATGAGATGAGTTTGGCCACAAAACGTTACCGGCCAGATCTAATTCTTGGTGAGGGTGGGTTTGGAGTTGTATATAAAGGAGTTATTGATGACACCGTGAGGGCTGGATACAAGACCACGCAAGTTGCCATCAAGGAGCTTAATCGAGAAGGGTACCAAGGTGATAGGGAATGGCTGGCAGAAGTTAACTATCTGGGACAGCTGAGTAACCCTAATCTTGTGAAGCTGATTGGGTACTGCTGTGAGGATGACCATCGGCTACTGGTCTATGAATACATGGCAAGTGGCAGCCTGGAAAAACATCTTTTTCGCATGGGCTGTACGCTTACATGGTCAAGAAGAATGAAGATTGCTTTAGATGCCGCAAAAGGGCTTGCTTTTCTTCATGGTGCAGAGAGACCAATCATTTACCGCGACTTCAAGACTTCAAATATCTTGTTGGATGGGGATTTTAATGCAAAGTTGTCAGACTTTGGCCTTGCAAAGGAAGGGCCAATGGGAGACCAAACCCATGTTTCAACACGAGTGATGGGCACGTATGGATATGCTGCTCCCGAGTATGTTATGACTGGGCATTTAACCGCTCGAAGTGATGTTTATGGATTTGGAGTGGTACTACTTGAGCTGCTCCTTGGAAGGAGAGCAATGGACAAGAGCAGACCCGGGCAAGAACACAACCTGGTTGAGTGGGCTCGCCCACTCTTAAACCATAATAAGAAACTTCTGAGGATCGTAGACCCTAGACTGGAAGGGCAGTACTCACTTAAAACAGCAATGAAGGTGGCCCATCTGGCATATCAATGCCTTAGCCAAAACCCGAAAGGGAGGCCCCTTATGAGCCAGGTGGTTGAATTGCTCGAGTCTCTTCAGACAGCAGGAAACCATGAACTTCAAAGTGGAGAAGGTGGTGTGACTCTTTATGAGGCTCCCAAGGGAACCTTTGGAACTACCCCCATGAAGAGAGACCCGAACAGAAGAGACGGTGAAAGGGGAGGAGAGGCACATAGGAGGAGCAAACCGGGAAACGGAGGGAGCAAGAGTGAGCCTATGAATGATTTTGATCGTAGTAACTTGTCTCCAAATTTTTGTGTCACTTGA

Protein Analysis

429

Amino Acids

47.57

Weight (kDa)

8.55

Isoelectric Point (pI)

33.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 78 - 346 1.8e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 79 - 349 1.6e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012008)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 342
AccB1I GGYRCC 1 cut(s) 342
AccBSI CCGCTC 1 cut(s) 773
AccI GTMKAC 1 cut(s) 924
AccII CGCG 1 cut(s) 603
AciI CCGC 3 cut(s) 552, 601, 771
AclI AACGTT 1 cut(s) 214
AclWI GGATC 1 cut(s) 926
AcoI YGGCCR 2 cut(s) 204, 221
AcsI RAATTY 1 cut(s) 1270
AcuI CTGAAG 1 cut(s) 1040
AfaI GTAC 5 cut(s) 344, 425, 511, 804, 947
AfiI CCNNNNNNNGG 4 cut(s) 558, 673, 934, 1214
AgsI TTSAA 5 cut(s) 610, 618, 708, 1040, 1082
AjnI CCWGG 3 cut(s) 480, 867, 1029
AluBI AGCT 4 cut(s) 328, 391, 415, 814
AluI AGCT 4 cut(s) 328, 391, 415, 814
Alw26I GTCTC 6 cut(s) 580, 684, 1056, 1146, 1161, 1269
AlwI GGATC 1 cut(s) 926
Ama87I CYCGRG 3 cut(s) 743, 851, 1046
AoxI GGCC 6 cut(s) 204, 221, 664, 680, 972, 1016
ApeKI GCWGC 3 cut(s) 477, 737, 814
ApoI RAATTY 1 cut(s) 1270
Asp718I GGTACC 1 cut(s) 342
AspS9I GGNCC 4 cut(s) 28, 680, 973, 1017
AsuC2I CCSGG 4 cut(s) 159, 852, 853, 1209
AsuHPI GGTGA 3 cut(s) 251, 362, 1184
AvaI CYCGRG 3 cut(s) 743, 851, 1046
AvaII GGWCC 1 cut(s) 28
BaeGI GKGCMC 1 cut(s) 725
BaeI ACNNNNGTAYC 4 cut(s) 334, 367, 415, 448
BalI TGGCCA 1 cut(s) 206
BanI GGYRCC 1 cut(s) 342
BanII GRGCYC 1 cut(s) 883
BauI CACGAG 1 cut(s) 711
BbvI GCAGC 3 cut(s) 489, 724, 801
BccI CCATC 5 cut(s) 326, 450, 626, 712, 984
BciT130I CCWGG 3 cut(s) 482, 869, 1031
BciVI GTATCC 1 cut(s) 290
BcnI CCSGG 4 cut(s) 159, 852, 853, 1209
BcoDI GTCTC 6 cut(s) 580, 684, 1056, 1146, 1161, 1269
BfaI CTAG 2 cut(s) 93, 930
BfuI GTATCC 1 cut(s) 290
BglI GCCNNNNNGGC 1 cut(s) 980
BglII AGATCT 1 cut(s) 226
BisI GCNGC 4 cut(s) 478, 552, 738, 815
BlsI GCNGC 4 cut(s) 479, 553, 739, 816
BmcAI AGTACT 1 cut(s) 947
Bme1390I CCNGG 7 cut(s) 159, 482, 852, 853, 869, 1031, 1209
Bme18I GGWCC 1 cut(s) 28
BmeT110I CYCGRG 3 cut(s) 743, 851, 1046
BmgT120I GGNCC 4 cut(s) 28, 680, 973, 1017
BmiI GGNNCC 4 cut(s) 344, 1019, 1116, 1126
BmrFI CCNGG 7 cut(s) 159, 482, 852, 853, 869, 1031, 1209
BmrI ACTGGG 1 cut(s) 768
BmsI GCATC 2 cut(s) 186, 538
BmuI ACTGGG 1 cut(s) 768
Bpu10I CCTNAGC 1 cut(s) 995
BpuEI CTTGAG 2 cut(s) 45, 830
BpuMI CCSGG 4 cut(s) 159, 852, 853, 1209
BsaAI YACGTR 1 cut(s) 726
BsaBI GATNNNNATC 2 cut(s) 441, 1248
BsaI GGTCTC 3 cut(s) 580, 684, 1146
BsaJI CCNNGG 5 cut(s) 157, 346, 820, 851, 1119
BsaXI ACNNNNNCTCC 2 cut(s) 1213, 1243
Bsc4I CCNNNNNNNGG 4 cut(s) 558, 673, 934, 1214
Bse118I RCCGGY 1 cut(s) 219
Bse1I ACTGG 4 cut(s) 54, 456, 763, 939
Bse3DI GCAATG 2 cut(s) 840, 969
Bse8I GATNNNNATC 2 cut(s) 441, 1248
BseBI CCWGG 3 cut(s) 482, 869, 1031
BseDI CCNNGG 5 cut(s) 157, 346, 820, 851, 1119
BseGI GGATG 2 cut(s) 442, 637
BseJI GATNNNNATC 2 cut(s) 441, 1248
BseLI CCNNNNNNNGG 4 cut(s) 558, 673, 934, 1214
BseMI GCAATG 2 cut(s) 840, 969
BseMII CTCAG 2 cut(s) 383, 905
BseNI ACTGG 4 cut(s) 54, 456, 763, 939
BseRI GAGGAG 2 cut(s) 1197, 1213
BseSI GKGCMC 1 cut(s) 725
BseXI GCAGC 3 cut(s) 489, 724, 801
BsgI GTGCAG 1 cut(s) 600
Bsh1236I CGCG 1 cut(s) 603
BshFI GGCC 6 cut(s) 206, 223, 666, 682, 974, 1018
BshNI GGYRCC 1 cut(s) 342
BsiHKCI CYCGRG 3 cut(s) 743, 851, 1046
BsiSI CCGG 4 cut(s) 159, 220, 852, 1208
BslFI GGGAC 1 cut(s) 399
BslI CCNNNNNNNGG 4 cut(s) 558, 673, 934, 1214
BsmAI GTCTC 6 cut(s) 580, 684, 1056, 1146, 1161, 1269
BsmBI CGTCTC 1 cut(s) 1161
BsmFI GGGAC 1 cut(s) 399
BsmI GAATGC 1 cut(s) 34
BsnI GGCC 6 cut(s) 206, 223, 666, 682, 974, 1018
Bso31I GGTCTC 3 cut(s) 580, 684, 1146
BsoBI CYCGRG 3 cut(s) 743, 851, 1046
Bsp1286I GDGCHC 2 cut(s) 725, 883
Bsp143I GATC 3 cut(s) 226, 918, 1249
BspACI CCGC 3 cut(s) 552, 601, 771
BspANI GGCC 6 cut(s) 206, 223, 666, 682, 974, 1018
BspCNI CTCAG 2 cut(s) 384, 906
BspFNI CGCG 1 cut(s) 603
BspLI GGNNCC 4 cut(s) 344, 1019, 1116, 1126
BspPI GGATC 1 cut(s) 926
BspT107I GGYRCC 1 cut(s) 342
BspTNI GGTCTC 3 cut(s) 580, 684, 1146
BsrBI CCGCTC 1 cut(s) 773
BsrDI GCAATG 2 cut(s) 840, 969
BsrFI RCCGGY 1 cut(s) 219
BsrI ACTGG 4 cut(s) 54, 456, 763, 939
BssAI RCCGGY 1 cut(s) 219
BssECI CCNNGG 5 cut(s) 157, 346, 820, 851, 1119
BssMI GATC 3 cut(s) 226, 918, 1249
BssSI CACGAG 1 cut(s) 711
BssT1I CCWWGG 3 cut(s) 346, 820, 1119
Bst2BI CACGAG 1 cut(s) 711
Bst2UI CCWGG 3 cut(s) 482, 869, 1031
Bst4CI ACNGT 2 cut(s) 286, 1172
Bst6I CTCTTC 3 cut(s) 1059, 1142, 1159
BstBAI YACGTR 1 cut(s) 726
BstC8I GCNNGC 3 cut(s) 366, 564, 883
BstDEI CTNAG 3 cut(s) 392, 914, 995
BstENI CCTNNNNNAGG 1 cut(s) 671
BstF5I GGATG 2 cut(s) 442, 637
BstFNI CGCG 1 cut(s) 603
BstKTI GATC 3 cut(s) 229, 921, 1252
BstMAI GTCTC 6 cut(s) 580, 684, 1056, 1146, 1161, 1269
BstMBI GATC 3 cut(s) 226, 918, 1249
BstMWI GCNNNNNNNGC 2 cut(s) 548, 980
BstNI CCWGG 3 cut(s) 482, 869, 1031
BstSCI CCNGG 7 cut(s) 157, 480, 850, 851, 867, 1029, 1207
BstSLI GKGCMC 1 cut(s) 725
BstUI CGCG 1 cut(s) 603
BstV1I GCAGC 3 cut(s) 489, 724, 801
BstX2I RGATCY 1 cut(s) 226
BstXI CCANNNNNNTGG 1 cut(s) 121
BstYI RGATCY 1 cut(s) 226
BsuI GTATCC 1 cut(s) 290
BsuRI GGCC 6 cut(s) 206, 223, 666, 682, 974, 1018
BtsCI GGATG 2 cut(s) 442, 637
Cac8I GCNNGC 3 cut(s) 366, 564, 883
Cfr10I RCCGGY 1 cut(s) 219
Cfr13I GGNCC 4 cut(s) 28, 680, 973, 1017
Cfr9I CCCGGG 1 cut(s) 851
CsiI ACCWGGT 1 cut(s) 867
Csp6I GTAC 5 cut(s) 343, 424, 510, 803, 946
CspCI CAANNNNNGTGG 4 cut(s) 295, 330, 951, 986
CviAII CATG 7 cut(s) 466, 502, 519, 575, 701, 1073, 1144
CviQI GTAC 5 cut(s) 343, 424, 510, 803, 946
DdeI CTNAG 3 cut(s) 392, 914, 995
DpnI GATC 3 cut(s) 228, 920, 1251
DpnII GATC 3 cut(s) 226, 918, 1249
EaeI YGGCCR 2 cut(s) 204, 221
Eam1104I CTCTTC 3 cut(s) 1059, 1142, 1159
EarI CTCTTC 3 cut(s) 1059, 1142, 1159
Eco130I CCWWGG 3 cut(s) 346, 820, 1119
Eco24I GRGCYC 1 cut(s) 883
Eco31I GGTCTC 3 cut(s) 580, 684, 1146
Eco47I GGWCC 1 cut(s) 28
Eco57I CTGAAG 1 cut(s) 1040
Eco88I CYCGRG 3 cut(s) 743, 851, 1046
EcoNI CCTNNNNNAGG 1 cut(s) 671
EcoO109I RGGNCCY 1 cut(s) 1017
EcoRII CCWGG 3 cut(s) 480, 867, 1029
EcoT14I CCWWGG 3 cut(s) 346, 820, 1119
EcoT38I GRGCYC 1 cut(s) 883
ErhI CCWWGG 3 cut(s) 346, 820, 1119
Esp3I CGTCTC 1 cut(s) 1161
FaeI CATG 7 cut(s) 469, 505, 522, 578, 704, 1076, 1147
FalI AAGNNNNNCTT 2 cut(s) 1112, 1144
FaqI GGGAC 1 cut(s) 399
FatI CATG 7 cut(s) 465, 501, 518, 574, 700, 1072, 1143
FblI GTMKAC 1 cut(s) 924
Fnu4HI GCNGC 4 cut(s) 478, 552, 738, 815
FokI GGATG 2 cut(s) 449, 644
FriOI GRGCYC 1 cut(s) 883
Fsp4HI GCNGC 4 cut(s) 478, 552, 738, 815
FspBI CTAG 2 cut(s) 93, 930
GluI GCNGC 4 cut(s) 478, 552, 738, 815
HaeIII GGCC 6 cut(s) 206, 223, 666, 682, 974, 1018
HapII CCGG 4 cut(s) 159, 220, 852, 1208
Hin1II CATG 7 cut(s) 469, 505, 522, 578, 704, 1076, 1147
HincII GTYRAC 1 cut(s) 376
HindII GTYRAC 1 cut(s) 376
HinfI GANTC 3 cut(s) 71, 1049, 1102
HpaI GTTAAC 1 cut(s) 376
HpaII CCGG 4 cut(s) 159, 220, 852, 1208
HphI GGTGA 3 cut(s) 251, 362, 1184
Hpy166II GTNNAC 2 cut(s) 376, 925
Hpy188I TCNGA 4 cut(s) 22, 658, 915, 1059
Hpy188III TCNNGA 4 cut(s) 335, 525, 610, 743
Hpy8I GTNNAC 2 cut(s) 376, 925
HpyAV CCTTC 7 cut(s) 155, 332, 671, 819, 932, 961, 1085
HpyCH4III ACNGT 2 cut(s) 286, 1172
HpyCH4IV ACGT 2 cut(s) 214, 725
HpyCH4V TGCA 3 cut(s) 581, 647, 671
HpyF10VI GCNNNNNNNGC 2 cut(s) 548, 980
HpyF3I CTNAG 3 cut(s) 392, 914, 995
HpySE526I ACGT 2 cut(s) 214, 725
Hsp92II CATG 7 cut(s) 469, 505, 522, 578, 704, 1076, 1147
KpnI GGTACC 1 cut(s) 346
KspAI GTTAAC 1 cut(s) 376
Kzo9I GATC 3 cut(s) 226, 918, 1249
LmnI GCTCC 6 cut(s) 325, 745, 822, 1120, 1200, 1221
Lsp1109I GCAGC 3 cut(s) 489, 724, 801
LweI GCATC 2 cut(s) 186, 538
MabI ACCWGGT 1 cut(s) 867
MaeI CTAG 2 cut(s) 93, 930
MaeII ACGT 2 cut(s) 214, 725
MaeIII GTNAC 5 cut(s) 215, 395, 1099, 1256, 1279
MalI GATC 3 cut(s) 228, 920, 1251
MbiI CCGCTC 1 cut(s) 773
MboI GATC 3 cut(s) 226, 918, 1249
MboII GAAGA 6 cut(s) 540, 547, 563, 1046, 1159, 1176
MflI RGATCY 1 cut(s) 226
MhlI GDGCHC 2 cut(s) 725, 883
MlsI TGGCCA 1 cut(s) 206
MluCI AATT 4 cut(s) 40, 231, 1040, 1270
MluNI TGGCCA 1 cut(s) 206
MlyI GAGTC 3 cut(s) 65, 1058, 1096
MmeI TCCRAC 1 cut(s) 609
Mox20I TGGCCA 1 cut(s) 206
MscI TGGCCA 1 cut(s) 206
MseI TTAA 6 cut(s) 330, 375, 642, 767, 893, 954
MslI CAYNNNNRTG 1 cut(s) 988
Msp20I TGGCCA 1 cut(s) 206
MspA1I CMGCKG 1 cut(s) 391
MspI CCGG 4 cut(s) 159, 220, 852, 1208
MspR9I CCNGG 7 cut(s) 159, 482, 852, 853, 869, 1031, 1209
Mva1269I GAATGC 1 cut(s) 34
MvaI CCWGG 3 cut(s) 482, 869, 1031
MvnI CGCG 1 cut(s) 603
MwoI GCNNNNNNNGC 2 cut(s) 548, 980
NciI CCSGG 4 cut(s) 159, 852, 853, 1209
NdeII GATC 3 cut(s) 226, 918, 1249
NlaIII CATG 7 cut(s) 469, 505, 522, 578, 704, 1076, 1147
NlaIV GGNNCC 4 cut(s) 344, 1019, 1116, 1126
NmuCI GTSAC 2 cut(s) 1099, 1279
PaeR7I CTCGAG 1 cut(s) 1046
PctI GAATGC 1 cut(s) 34
PkrI GCNGC 4 cut(s) 479, 553, 739, 816
PleI GAGTC 3 cut(s) 65, 1057, 1096
PpsI GAGTC 3 cut(s) 65, 1057, 1096
Ppu21I YACGTR 1 cut(s) 726
Psp1406I AACGTT 1 cut(s) 214
Psp6I CCWGG 3 cut(s) 480, 867, 1029
PspGI CCWGG 3 cut(s) 480, 867, 1029
PspN4I GGNNCC 4 cut(s) 344, 1019, 1116, 1126
PspPI GGNCC 4 cut(s) 28, 680, 973, 1017
PspXI VCTCGAGB 1 cut(s) 1046
PsuI RGATCY 1 cut(s) 226
PvuII CAGCTG 1 cut(s) 391
RsaI GTAC 5 cut(s) 344, 425, 511, 804, 947
RsaNI GTAC 5 cut(s) 343, 424, 510, 803, 946
RseI CAYNNNNRTG 1 cut(s) 988
SaqAI TTAA 6 cut(s) 330, 375, 642, 767, 893, 954
SatI GCNGC 4 cut(s) 478, 552, 738, 815
Sau3AI GATC 3 cut(s) 226, 918, 1249
Sau96I GGNCC 4 cut(s) 28, 680, 973, 1017
ScaI AGTACT 1 cut(s) 947
SchI GAGTC 3 cut(s) 65, 1058, 1096
ScrFI CCNGG 7 cut(s) 159, 482, 852, 853, 869, 1031, 1209
SduI GDGCHC 2 cut(s) 725, 883
SexAI ACCWGGT 1 cut(s) 867
SfaNI GCATC 2 cut(s) 186, 538
Sfr274I CTCGAG 1 cut(s) 1046
SinI GGWCC 1 cut(s) 28
SlaI CTCGAG 1 cut(s) 1046
SmaI CCCGGG 1 cut(s) 853
SmiMI CAYNNNNRTG 1 cut(s) 988
SmlI CTYRAG 3 cut(s) 60, 809, 1046
SmoI CTYRAG 3 cut(s) 60, 809, 1046
Sse9I AATT 4 cut(s) 40, 231, 1040, 1270
SsiI CCGC 3 cut(s) 552, 601, 771
SspMI CTAG 2 cut(s) 93, 930
StyD4I CCNGG 7 cut(s) 157, 480, 850, 851, 867, 1029, 1207
StyI CCWWGG 3 cut(s) 346, 820, 1119
TaaI ACNGT 2 cut(s) 286, 1172
TaiI ACGT 2 cut(s) 217, 728
TaqI TCGA 3 cut(s) 334, 775, 1047
TasI AATT 4 cut(s) 40, 231, 1040, 1270
TatI WGTACW 1 cut(s) 945
TauI GCSGC 1 cut(s) 554
Tru1I TTAA 6 cut(s) 330, 375, 642, 767, 893, 954
Tru9I TTAA 6 cut(s) 330, 375, 642, 767, 893, 954
TseFI GTSAC 2 cut(s) 1099, 1279
TseI GCWGC 3 cut(s) 477, 737, 814
Tsp45I GTSAC 2 cut(s) 1099, 1279
TspDTI ATGAA 7 cut(s) 474, 548, 563, 980, 1089, 1160, 1253
TspGWI ACGGA 1 cut(s) 1230
TspMI CCCGGG 1 cut(s) 851
VpaK11BI GGWCC 1 cut(s) 28
XagI CCTNNNNNAGG 1 cut(s) 671
XapI RAATTY 1 cut(s) 1270
XhoI CTCGAG 1 cut(s) 1046
XmaI CCCGGG 1 cut(s) 851
XmiI GTMKAC 1 cut(s) 924
XspI CTAG 2 cut(s) 93, 930
ZrmI AGTACT 1 cut(s) 947
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.