Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008621

Physical Location & Seq

Genomic Coordinates Forward (+)

5649928 .. 5655320

Gene Structure 5393 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G13560.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1872 bp

ATGGGAATAGCCAATAAGCTCCGGCTAAGTTCATCATCTCTCAGCCGAATCCTCCACCGGAGAATACTTTACTCATCCGCTGTCAGATCTTTCACCACATCGGAAGGTCACCGTCCCACCATCGTTCATAAACAAGGTCTCGATATCCTCCATGATCCTTGGTTCAACAAGGGGACTGCGTTTACGATGACGGAGAGAAATCGTTTAGATCTTAGAGGTCTTCTTCCTCCTAATGTTATGGACTCTGAGCAACAGATTTTTCGTTTTATGACTGACCTGAAGAGATTAGAGGAGCAAGCTAGAGATGGACCTTCTGATCCTAATGCTTTGGCTAAATGGCGGATTCTTAATCGGTTACATGACCGAAATGAGACTATGTACTATAAGGTTTTGATTAACAATATTGAGGAGTATGCGCCGATAGTGTATACTCCTACGGTAGGTCTTGTCTGCCAGAACTACAGTGGGTTGTTTAGGAGGCCAAGGGGAATGTATTTTAGTGCTGAAGATCGTGGTGAAATGATGTCCATGGTTTACAACTGGCCAGCTGAGCAGGTTGATATGATTGTTGTTACCGATGGAAGCCGGATTTTGGGTCTTGGAGATCTAGGTGTTCATGGAATTGGAATTGCTGTAGGGAAGCTTGATTTATATGTTGCCGCAGCTGGAATAAATCCTCAACGGGTACTACCTGTCATGATTGATGTTGGAACAAACAATGAAAAACTACGCAACGACCCCATGTACTTGGGTCTGCAACAACGTCGTTTAGAGGATGACGACTATATAGATGTTATTGATGAATTTATGGAGGCAGTGTATACTCGGTGGCCACATGTTATTGTGCAGTTTGAGGATTTCCAGAGCAAGTGGGCTTTCAAATTATTGCAGAGGTATAGATGCACCTACCGAATGTTCAATGATGATGTCCAGGGGACAGCAGGGGTTGCTATCGCTGGTCTTCTTGGAGCAGTTAGAGCACAGGGGCGACCTATGATTGATTTCCCAAAGATGAAGATCGTTGTTGCTGGCGCGGGAAGTGCGGGAATTGGTGTTCTAAATGCTGCGAGGAAGACAATGGCACGAATGTTGGGAAATACTGAAACTGCGTTTGATAGTGCACAAAGTCAATTTTGGGTGGTTGATGCGCAGGGTCTTATCACCGAAGGCCGGGAAAATATTGACCCAGAGGCTCAGCCTTTTGCTAGGAAGACTAAAGAAATGGAGCGTCAGGGATTAAAAGAAGGAGCAACTCTTGTGGAAGTGGTTCGTGAAGTTAAACCTGATGTGCTTCTTGGTTTATCAGCAGTTGGAGGGTTATTCTCAAAAGAGGTTTTAGAAGCAATGAAAGGTTCAACCTCGACAAGGCCTGCTATATTTGCAATGTCAAACCCCACAAAAAATGCTGAATGCACGCCTCAAGATGCATTTTCGATATTAGGCGAAAATATGATTTTTGCGAGTGGAAGCCCATTCAAGAATGTGGAATTTGGAAATGGTCATGTAGGACATTGCAACCAGGGAAACAACATGTATCTATTTCCAGGTATTGGACTTGGCACTCTTTTATCTGGTGCTCCCATTGTCTCCGACGGGATGCTTCAGGCCGCATCCGAGTGCCTAGCAGCATACATGAGCGAAGAAGAAGTGCTAGAGGGGATTATATACCCTCCAATATCAAGGATACGAGACATAACAAAAAGAATAGCAGCTGCGGTGATTAAGGAAGCGATTGAGGAGGATTTGGTTGAAGGATATAGAGAAATGGACGCTCGAGAGATCCAAAAGCTGGATGAGGAGGGGCTGATGGAGTATGTGGAAAACAACATGTGGAATCCAGAGTACCCGACTTTGGTCTACAAGGATGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004470 GO:0004471 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006082 GO:0006090 GO:0006108 GO:0006950 GO:0006970 GO:0008144 GO:0008150 GO:0008152 GO:0008270 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0009987 GO:0016491 GO:0016614 GO:0016615 GO:0016616 GO:0017076 GO:0019752 GO:0030554 GO:0031974 GO:0032553 GO:0032555 GO:0032559 GO:0032787 GO:0035639 GO:0036094 GO:0042802 GO:0042803 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043648 GO:0044237 GO:0044281 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0046914 GO:0046983 GO:0050896 GO:0050897 GO:0055114 GO:0070013 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00620 ko00710 ko01100 ko01120 ko01200 map00620 map00710 map01100 map01120 map01200

Pfam Domains

Protein Families

Malic_M malic

Protein Analysis

623

Amino Acids

69.65

Weight (kDa)

5.31

Isoelectric Point (pI)

42.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
malic	PF00390	120 - 300	5.4e-77	Malic enzyme, N-terminal domain
Malic_M	PF03949	310 - 578	2.7e-92	Malic enzyme, NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008621)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G13560
fragaria_vesca	FvH4_7g08630 FvH4_7g08630 FvH4_7g08630 FvH4_7g08630 FvH4_7g08630 FvH4_7g08630
malus_domestica	MD02G1226700.v1.1 MD07G1087300.v1.1
prunus_persica	Prupe.2G114100_v2.0.a1
pyrus_communis	pycom02g19570 pycom07g06980
rosa_chinensis	RchiOBHm_Chr1g0343641
rosa_laevigata	RLG00000028958
rosa_multiflora	Rmu_sc0000021.1_g000007
rosa_roxburghii	Rroxscaffold_4G00310420
rosa_rugosa	Rorug01G0167900 Rorug01G0167900
rosa_samantha	Rh1AG184000 Rh1BG151600 Rh1CG170900 Rh1DG183500
rosa_wichuraiana	Rw1G015250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1149
Acc36I	ACCTGC	1 cut(s)	544
AccB7I	CCANNNNNTGG	2 cut(s)	1550, 1789
AccI	GTMKAC	3 cut(s)	428, 821, 1857
AccII	CGCG	1 cut(s)	1034
AciI	CCGC	7 cut(s)	78, 340, 660, 1034, 1043, 1608, 1715
AclWI	GGATC	3 cut(s)	149, 311, 1774
AcoI	YGGCCR	2 cut(s)	542, 830
AcsI	RAATTY	2 cut(s)	803, 1487
AcuI	CTGAAG	3 cut(s)	299, 525, 1586
AfaI	GTAC	4 cut(s)	380, 687, 746, 1844
AfiI	CCNNNNNNNGG	7 cut(s)	440, 592, 1170, 1365, 1550, 1789, 1852
AflIII	ACRYGT	3 cut(s)	835, 1530, 1827
AgsI	TTSAA	6 cut(s)	166, 880, 919, 1356, 1477, 1751
AjnI	CCWGG	3 cut(s)	930, 1518, 1543
AloI	GAACNNNNNNTCC	2 cut(s)	1038, 1070
AluBI	AGCT	7 cut(s)	19, 299, 548, 643, 665, 1712, 1789
AluI	AGCT	7 cut(s)	19, 299, 548, 643, 665, 1712, 1789
Alw21I	GWGCWC	3 cut(s)	982, 1123, 1579
Alw26I	GTCTC	4 cut(s)	143, 365, 1591, 1683
Alw44I	GTGCAC	1 cut(s)	1119
AlwI	GGATC	3 cut(s)	149, 311, 1774
Ama87I	CYCGRG	1 cut(s)	1773
AoxI	GGCC	6 cut(s)	479, 542, 830, 1168, 1367, 1605
ApaLI	GTGCAC	1 cut(s)	1119
ApeKI	GCWGC	5 cut(s)	662, 1064, 1625, 1709, 1712
ApoI	RAATTY	2 cut(s)	803, 1487
Asp700I	GAANNNNTTC	1 cut(s)	1266
AspLEI	GCGC	3 cut(s)	418, 1034, 1150
AspS9I	GGNCC	1 cut(s)	308
AsuC2I	CCSGG	1 cut(s)	1172
AsuHPI	GGTGA	5 cut(s)	85, 101, 527, 1153, 1729
AvaI	CYCGRG	1 cut(s)	1773
AvaII	GGWCC	1 cut(s)	308
BaeGI	GKGCMC	1 cut(s)	1123
BalI	TGGCCA	2 cut(s)	544, 832
BbsI	GAAGAC	4 cut(s)	212, 953, 1079, 1217
Bbv12I	GWGCWC	3 cut(s)	982, 1123, 1579
BbvI	GCAGC	5 cut(s)	674, 1051, 1637, 1699, 1721
BccI	CCATC	4 cut(s)	128, 299, 572, 1801
BcgI	CGANNNNNNTGC	2 cut(s)	746, 780
BciT130I	CCWGG	3 cut(s)	932, 1520, 1545
BciVI	GTATCC	1 cut(s)	1677
BcnI	CCSGG	1 cut(s)	1172
BcoDI	GTCTC	4 cut(s)	143, 365, 1591, 1683
BfaI	CTAG	5 cut(s)	300, 608, 1206, 1622, 1652
BfmI	CTRYAG	2 cut(s)	460, 633
BfuAI	ACCTGC	1 cut(s)	544
BfuI	GTATCC	1 cut(s)	1677
BglII	AGATCT	3 cut(s)	86, 208, 604
BisI	GCNGC	7 cut(s)	660, 663, 1065, 1608, 1626, 1710, 1713
BlpI	GCTNAGC	2 cut(s)	549, 1194
BlsI	GCNGC	7 cut(s)	661, 664, 1066, 1609, 1627, 1711, 1714
Bme1390I	CCNGG	4 cut(s)	932, 1172, 1520, 1545
Bme18I	GGWCC	1 cut(s)	308
BmeT110I	CYCGRG	1 cut(s)	1773
BmgT120I	GGNCC	1 cut(s)	308
BmrFI	CCNGG	4 cut(s)	932, 1172, 1520, 1545
BmsI	GCATC	5 cut(s)	890, 1135, 1414, 1587, 1619
BoxI	GACNNNNGTC	1 cut(s)	1853
BpiI	GAAGAC	4 cut(s)	212, 953, 1079, 1217
Bpu1102I	GCTNAGC	2 cut(s)	549, 1194
BpuEI	CTTGAG	1 cut(s)	1404
BpuMI	CCSGG	1 cut(s)	1172
BsaBI	GATNNNNATC	1 cut(s)	1016
BsaI	GGTCTC	1 cut(s)	143
BsaJI	CCNNGG	5 cut(s)	158, 482, 528, 931, 1519
BsaWI	WCCGGW	1 cut(s)	57
BsaXI	ACNNNNNCTCC	2 cut(s)	803, 833
Bsc4I	CCNNNNNNNGG	7 cut(s)	440, 592, 1170, 1365, 1550, 1789, 1852
Bse1I	ACTGG	1 cut(s)	545
Bse3DI	GCAATG	3 cut(s)	1350, 1389, 1510
Bse8I	GATNNNNATC	1 cut(s)	1016
BseBI	CCWGG	3 cut(s)	932, 1520, 1545
BseDI	CCNNGG	5 cut(s)	158, 482, 528, 931, 1519
BseGI	GGATG	6 cut(s)	74, 781, 1602, 1610, 1798, 1870
BseJI	GATNNNNATC	1 cut(s)	1016
BseLI	CCNNNNNNNGG	7 cut(s)	440, 592, 1170, 1365, 1550, 1789, 1852
BseMI	GCAATG	3 cut(s)	1350, 1389, 1510
BseMII	CTCAG	4 cut(s)	55, 237, 540, 1208
BseNI	ACTGG	1 cut(s)	545
BseRI	GAGGAG	4 cut(s)	305, 422, 1751, 1811
BseSI	GKGCMC	1 cut(s)	1123
BseXI	GCAGC	5 cut(s)	674, 1051, 1637, 1699, 1721
BsgI	GTGCAG	1 cut(s)	866
Bsh1236I	CGCG	1 cut(s)	1034
BshFI	GGCC	6 cut(s)	481, 544, 832, 1170, 1369, 1607
BsiHKAI	GWGCWC	3 cut(s)	982, 1123, 1579
BsiHKCI	CYCGRG	1 cut(s)	1773
BsiSI	CCGG	4 cut(s)	22, 58, 586, 1171
BslFI	GGGAC	3 cut(s)	99, 187, 949
BslI	CCNNNNNNNGG	7 cut(s)	440, 592, 1170, 1365, 1550, 1789, 1852
BsmAI	GTCTC	4 cut(s)	143, 365, 1591, 1683
BsmFI	GGGAC	3 cut(s)	99, 187, 949
BsmI	GAATGC	1 cut(s)	1415
BsnI	GGCC	6 cut(s)	481, 544, 832, 1170, 1369, 1607
Bso31I	GGTCTC	1 cut(s)	143
BsoBI	CYCGRG	1 cut(s)	1773
Bsp1286I	GDGCHC	3 cut(s)	982, 1123, 1579
Bsp143I	GATC	8 cut(s)	86, 154, 208, 316, 508, 604, 1017, 1779
Bsp1720I	GCTNAGC	2 cut(s)	549, 1194
Bsp19I	CCATGG	1 cut(s)	528
BspACI	CCGC	7 cut(s)	78, 340, 660, 1034, 1043, 1608, 1715
BspANI	GGCC	6 cut(s)	481, 544, 832, 1170, 1369, 1607
BspCNI	CTCAG	4 cut(s)	54, 238, 541, 1207
BspFNI	CGCG	1 cut(s)	1034
BspHI	TCATGA	1 cut(s)	696
BspMI	ACCTGC	1 cut(s)	544
BspPI	GGATC	3 cut(s)	149, 311, 1774
BspTNI	GGTCTC	1 cut(s)	143
BsrDI	GCAATG	3 cut(s)	1350, 1389, 1510
BsrI	ACTGG	1 cut(s)	545
BssECI	CCNNGG	5 cut(s)	158, 482, 528, 931, 1519
BssMI	GATC	8 cut(s)	86, 154, 208, 316, 508, 604, 1017, 1779
BssNAI	GTATAC	2 cut(s)	429, 822
BssT1I	CCWWGG	3 cut(s)	158, 482, 528
Bst1107I	GTATAC	2 cut(s)	429, 822
Bst2UI	CCWGG	3 cut(s)	932, 1520, 1545
Bst4CI	ACNGT	3 cut(s)	113, 439, 464
Bst6I	CTCTTC	1 cut(s)	275
BstAPI	GCANNNNNTGC	1 cut(s)	947
BstC8I	GCNNGC	5 cut(s)	297, 546, 1030, 1371, 1415
BstDEI	CTNAG	6 cut(s)	26, 41, 212, 246, 549, 1194
BstDSI	CCRYGG	1 cut(s)	528
BstEII	GGTNACC	1 cut(s)	107
BstENI	CCTNNNNNAGG	2 cut(s)	438, 1363
BstF5I	GGATG	6 cut(s)	74, 781, 1602, 1610, 1798, 1870
BstFNI	CGCG	1 cut(s)	1034
BstHHI	GCGC	3 cut(s)	418, 1034, 1150
BstKTI	GATC	8 cut(s)	89, 157, 211, 319, 511, 607, 1020, 1782
BstMAI	GTCTC	4 cut(s)	143, 365, 1591, 1683
BstMBI	GATC	8 cut(s)	86, 154, 208, 316, 508, 604, 1017, 1779
BstMWI	GCNNNNNNNGC	5 cut(s)	550, 947, 977, 1040, 1379
BstNI	CCWGG	3 cut(s)	932, 1520, 1545
BstNSI	RCATGY	3 cut(s)	839, 1534, 1831
BstPAI	GACNNNNGTC	1 cut(s)	1853
BstPI	GGTNACC	1 cut(s)	107
BstSCI	CCNGG	4 cut(s)	930, 1170, 1518, 1543
BstSFI	CTRYAG	2 cut(s)	460, 633
BstSLI	GKGCMC	1 cut(s)	1123
BstUI	CGCG	1 cut(s)	1034
BstV1I	GCAGC	5 cut(s)	674, 1051, 1637, 1699, 1721
BstV2I	GAAGAC	4 cut(s)	212, 953, 1079, 1217
BstX2I	RGATCY	4 cut(s)	86, 208, 604, 1779
BstXI	CCANNNNNNTGG	1 cut(s)	748
BstYI	RGATCY	4 cut(s)	86, 208, 604, 1779
BstZ17I	GTATAC	2 cut(s)	429, 822
BsuI	GTATCC	1 cut(s)	1677
BsuRI	GGCC	6 cut(s)	481, 544, 832, 1170, 1369, 1607
BtgI	CCRYGG	1 cut(s)	528
BtsCI	GGATG	6 cut(s)	74, 781, 1602, 1610, 1798, 1870
BtsI	GCAGTG	1 cut(s)	822
BtsIMutI	CAGTG	2 cut(s)	469, 822
BveI	ACCTGC	1 cut(s)	544
Cac8I	GCNNGC	5 cut(s)	297, 546, 1030, 1371, 1415
CciI	TCATGA	1 cut(s)	696
CfoI	GCGC	3 cut(s)	418, 1034, 1150
Cfr13I	GGNCC	1 cut(s)	308
CseI	GACGC	2 cut(s)	1217, 1778
Csp6I	GTAC	4 cut(s)	379, 686, 745, 1843
CspCI	CAANNNNNGTGG	2 cut(s)	1239, 1274
CviQI	GTAC	4 cut(s)	379, 686, 745, 1843
DdeI	CTNAG	6 cut(s)	26, 41, 212, 246, 549, 1194
DpnI	GATC	8 cut(s)	88, 156, 210, 318, 510, 606, 1019, 1781
DpnII	GATC	8 cut(s)	86, 154, 208, 316, 508, 604, 1017, 1779
EaeI	YGGCCR	2 cut(s)	542, 830
Eam1104I	CTCTTC	1 cut(s)	275
EarI	CTCTTC	1 cut(s)	275
EciI	GGCGGA	1 cut(s)	355
Eco130I	CCWWGG	3 cut(s)	158, 482, 528
Eco147I	AGGCCT	1 cut(s)	1369
Eco31I	GGTCTC	1 cut(s)	143
Eco32I	GATATC	1 cut(s)	145
Eco47I	GGWCC	1 cut(s)	308
Eco57I	CTGAAG	3 cut(s)	299, 525, 1586
Eco88I	CYCGRG	1 cut(s)	1773
Eco91I	GGTNACC	1 cut(s)	107
EcoNI	CCTNNNNNAGG	2 cut(s)	438, 1363
EcoO65I	GGTNACC	1 cut(s)	107
EcoRII	CCWGG	3 cut(s)	930, 1518, 1543
EcoRV	GATATC	1 cut(s)	145
EcoT14I	CCWWGG	3 cut(s)	158, 482, 528
EcoT22I	ATGCAT	1 cut(s)	1429
ErhI	CCWWGG	3 cut(s)	158, 482, 528
FaqI	GGGAC	3 cut(s)	99, 187, 949
FauI	CCCGC	2 cut(s)	1027, 1036
FblI	GTMKAC	3 cut(s)	428, 821, 1857
Fnu4HI	GCNGC	7 cut(s)	660, 663, 1065, 1608, 1626, 1710, 1713
FokI	GGATG	5 cut(s)	61, 788, 1597, 1609, 1805
Fsp4HI	GCNGC	7 cut(s)	660, 663, 1065, 1608, 1626, 1710, 1713
FspBI	CTAG	5 cut(s)	300, 608, 1206, 1622, 1652
FspI	TGCGCA	1 cut(s)	1149
GlaI	GCGC	3 cut(s)	417, 1033, 1149
GluI	GCNGC	7 cut(s)	660, 663, 1065, 1608, 1626, 1710, 1713
HaeIII	GGCC	6 cut(s)	481, 544, 832, 1170, 1369, 1607
HapII	CCGG	4 cut(s)	22, 58, 586, 1171
HgaI	GACGC	2 cut(s)	1217, 1778
HhaI	GCGC	3 cut(s)	418, 1034, 1150
Hin6I	GCGC	3 cut(s)	416, 1032, 1148
HinP1I	GCGC	3 cut(s)	416, 1032, 1148
HindIII	AAGCTT	1 cut(s)	641
HinfI	GANTC	4 cut(s)	48, 242, 343, 1834
HpaII	CCGG	4 cut(s)	22, 58, 586, 1171
HphI	GGTGA	5 cut(s)	85, 101, 527, 1153, 1729
Hpy166II	GTNNAC	6 cut(s)	183, 429, 535, 822, 1121, 1858
Hpy188I	TCNGA	6 cut(s)	86, 103, 247, 316, 1591, 1615
Hpy188III	TCNNGA	8 cut(s)	140, 697, 862, 1271, 1421, 1477, 1775, 1838
Hpy8I	GTNNAC	6 cut(s)	183, 429, 535, 822, 1121, 1858
Hpy99I	CGWCG	2 cut(s)	768, 1595
HpyAV	CCTTC	5 cut(s)	98, 321, 1160, 1238, 1745
HpyCH4III	ACNGT	3 cut(s)	113, 439, 464
HpyCH4IV	ACGT	1 cut(s)	763
HpyCH4V	TGCA	9 cut(s)	757, 847, 889, 903, 1121, 1382, 1413, 1427, 1515
HpyF10VI	GCNNNNNNNGC	5 cut(s)	550, 947, 977, 1040, 1379
HpyF3I	CTNAG	6 cut(s)	26, 41, 212, 246, 549, 1194
HpySE526I	ACGT	1 cut(s)	763
HspAI	GCGC	3 cut(s)	416, 1032, 1148
Kzo9I	GATC	8 cut(s)	86, 154, 208, 316, 508, 604, 1017, 1779
LmnI	GCTCC	6 cut(s)	24, 292, 968, 1225, 1247, 1582
Lsp1109I	GCAGC	5 cut(s)	674, 1051, 1637, 1699, 1721
LweI	GCATC	5 cut(s)	890, 1135, 1414, 1587, 1619
MaeI	CTAG	5 cut(s)	300, 608, 1206, 1622, 1652
MaeII	ACGT	1 cut(s)	763
MaeIII	GTNAC	3 cut(s)	107, 354, 571
MalI	GATC	8 cut(s)	88, 156, 210, 318, 510, 606, 1019, 1781
MboI	GATC	8 cut(s)	86, 154, 208, 316, 508, 604, 1017, 1779
MflI	RGATCY	4 cut(s)	86, 208, 604, 1779
MhlI	GDGCHC	3 cut(s)	982, 1123, 1579
MlsI	TGGCCA	2 cut(s)	544, 832
MluCI	AATT	7 cut(s)	621, 627, 803, 881, 1047, 1130, 1487
MluNI	TGGCCA	2 cut(s)	544, 832
MlyI	GAGTC	1 cut(s)	236
MmeI	TCCRAC	3 cut(s)	688, 1291, 1614
Mox20I	TGGCCA	2 cut(s)	544, 832
Mph1103I	ATGCAT	1 cut(s)	1429
MroXI	GAANNNNTTC	1 cut(s)	1266
MscI	TGGCCA	2 cut(s)	544, 832
MseI	TTAA	5 cut(s)	348, 396, 1238, 1278, 1722
MslI	CAYNNNNRTG	1 cut(s)	1615
Msp20I	TGGCCA	2 cut(s)	544, 832
MspA1I	CMGCKG	4 cut(s)	80, 548, 665, 1712
MspI	CCGG	4 cut(s)	22, 58, 586, 1171
MspR9I	CCNGG	4 cut(s)	932, 1172, 1520, 1545
Mva1269I	GAATGC	1 cut(s)	1415
MvaI	CCWGG	3 cut(s)	932, 1520, 1545
MvnI	CGCG	1 cut(s)	1034
MwoI	GCNNNNNNNGC	5 cut(s)	550, 947, 977, 1040, 1379
NciI	CCSGG	1 cut(s)	1172
NcoI	CCATGG	1 cut(s)	528
NdeII	GATC	8 cut(s)	86, 154, 208, 316, 508, 604, 1017, 1779
NmuCI	GTSAC	1 cut(s)	107
NsbI	TGCGCA	1 cut(s)	1149
NsiI	ATGCAT	1 cut(s)	1429
NspI	RCATGY	3 cut(s)	839, 1534, 1831
PaeR7I	CTCGAG	1 cut(s)	1773
PagI	TCATGA	1 cut(s)	696
PceI	AGGCCT	1 cut(s)	1369
PciI	ACATGT	3 cut(s)	835, 1530, 1827
PctI	GAATGC	1 cut(s)	1415
PdmI	GAANNNNTTC	1 cut(s)	1266
PfeI	GAWTC	3 cut(s)	48, 343, 1834
PflMI	CCANNNNNTGG	2 cut(s)	1550, 1789
PkrI	GCNGC	7 cut(s)	661, 664, 1066, 1609, 1627, 1711, 1714
PleI	GAGTC	1 cut(s)	236
PpsI	GAGTC	1 cut(s)	236
PscI	ACATGT	3 cut(s)	835, 1530, 1827
PshAI	GACNNNNGTC	1 cut(s)	1853
Psp6I	CCWGG	3 cut(s)	930, 1518, 1543
PspEI	GGTNACC	1 cut(s)	107
PspGI	CCWGG	3 cut(s)	930, 1518, 1543
PspPI	GGNCC	1 cut(s)	308
PsuI	RGATCY	4 cut(s)	86, 208, 604, 1779
PvuII	CAGCTG	3 cut(s)	548, 665, 1712
RsaI	GTAC	4 cut(s)	380, 687, 746, 1844
RsaNI	GTAC	4 cut(s)	379, 686, 745, 1843
RseI	CAYNNNNRTG	1 cut(s)	1615
SaqAI	TTAA	5 cut(s)	348, 396, 1238, 1278, 1722
SatI	GCNGC	7 cut(s)	660, 663, 1065, 1608, 1626, 1710, 1713
Sau3AI	GATC	8 cut(s)	86, 154, 208, 316, 508, 604, 1017, 1779
Sau96I	GGNCC	1 cut(s)	308
SchI	GAGTC	1 cut(s)	236
ScrFI	CCNGG	4 cut(s)	932, 1172, 1520, 1545
SduI	GDGCHC	3 cut(s)	982, 1123, 1579
SfaNI	GCATC	5 cut(s)	890, 1135, 1414, 1587, 1619
SfcI	CTRYAG	2 cut(s)	460, 633
Sfr274I	CTCGAG	1 cut(s)	1773
SinI	GGWCC	1 cut(s)	308
SlaI	CTCGAG	1 cut(s)	1773
SmiMI	CAYNNNNRTG	1 cut(s)	1615
SmlI	CTYRAG	2 cut(s)	1419, 1773
SmoI	CTYRAG	2 cut(s)	1419, 1773
Sse9I	AATT	7 cut(s)	621, 627, 803, 881, 1047, 1130, 1487
SseBI	AGGCCT	1 cut(s)	1369
SsiI	CCGC	7 cut(s)	78, 340, 660, 1034, 1043, 1608, 1715
SspI	AATATT	2 cut(s)	403, 1180
SspMI	CTAG	5 cut(s)	300, 608, 1206, 1622, 1652
StuI	AGGCCT	1 cut(s)	1369
StyD4I	CCNGG	4 cut(s)	930, 1170, 1518, 1543
StyI	CCWWGG	3 cut(s)	158, 482, 528
TaaI	ACNGT	3 cut(s)	113, 439, 464
TaiI	ACGT	1 cut(s)	766
TaqI	TCGA	4 cut(s)	141, 1361, 1433, 1774
TaqII	GACCGA	1 cut(s)	378
TasI	AATT	7 cut(s)	621, 627, 803, 881, 1047, 1130, 1487
TatI	WGTACW	2 cut(s)	378, 744
TauI	GCSGC	2 cut(s)	662, 1610
TfiI	GAWTC	3 cut(s)	48, 343, 1834
Tru1I	TTAA	5 cut(s)	348, 396, 1238, 1278, 1722
Tru9I	TTAA	5 cut(s)	348, 396, 1238, 1278, 1722
TscAI	CASTG	2 cut(s)	469, 822
TseFI	GTSAC	1 cut(s)	107
TseI	GCWGC	5 cut(s)	662, 1064, 1625, 1709, 1712
Tsp45I	GTSAC	1 cut(s)	107
TspDTI	ATGAA	7 cut(s)	21, 116, 605, 735, 816, 1028, 1361
TspGWI	ACGGA	1 cut(s)	206
TspRI	CASTG	2 cut(s)	469, 822
Van91I	CCANNNNNTGG	2 cut(s)	1550, 1789
VneI	GTGCAC	1 cut(s)	1119
VpaK11BI	GGWCC	1 cut(s)	308
XagI	CCTNNNNNAGG	2 cut(s)	438, 1363
XapI	RAATTY	2 cut(s)	803, 1487
XceI	RCATGY	3 cut(s)	839, 1534, 1831
XcmI	CCANNNNNNNNNTGG	1 cut(s)	461
XhoI	CTCGAG	1 cut(s)	1773
XmiI	GTMKAC	3 cut(s)	428, 821, 1857
XmnI	GAANNNNTTC	1 cut(s)	1266
XspI	CTAG	5 cut(s)	300, 608, 1206, 1622, 1652
Zsp2I	ATGCAT	1 cut(s)	1429

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.