malic enzyme
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G13560 |
| fragaria_vesca | FvH4_7g08630 FvH4_7g08630 FvH4_7g08630 FvH4_7g08630 FvH4_7g08630 FvH4_7g08630 |
| malus_domestica | MD02G1226700.v1.1 MD07G1087300.v1.1 |
| prunus_persica | Prupe.2G114100_v2.0.a1 |
| pyrus_communis | pycom02g19570 pycom07g06980 |
| rosa_chinensis | RchiOBHm_Chr1g0343641 |
| rosa_laevigata | RLG00000028958 |
| rosa_multiflora | Rmu_sc0000021.1_g000007 |
| rosa_roxburghii | Rroxscaffold_4G00310420 |
| rosa_rugosa | Rorug01G0167900 Rorug01G0167900 |
| rosa_samantha | Rh1AG184000 Rh1BG151600 Rh1CG170900 Rh1DG183500 |
| rosa_wichuraiana | Rw1G015250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 18 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 92 |
| Acc65I | GGTACC | 1 cut(s) | 1236 |
| AccB1I | GGYRCC | 1 cut(s) | 1236 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1031 |
| AccII | CGCG | 1 cut(s) | 1242 |
| AciI | CCGC | 3 cut(s) | 1089, 1240, 1264 |
| AclWI | GGATC | 2 cut(s) | 659, 1230 |
| AcoI | YGGCCR | 3 cut(s) | 23, 311, 979 |
| AcsI | RAATTY | 2 cut(s) | 284, 1292 |
| AfaI | GTAC | 6 cut(s) | 168, 385, 895, 1016, 1042, 1238 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1031, 1246 |
| AflIII | ACRYGT | 2 cut(s) | 1011, 1308 |
| AgsI | TTSAA | 3 cut(s) | 335, 837, 958 |
| AhlI | ACTAGT | 1 cut(s) | 1333 |
| AjnI | CCWGG | 3 cut(s) | 96, 999, 1024 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 519, 551 |
| AluBI | AGCT | 7 cut(s) | 29, 124, 208, 296, 437, 1196, 1261 |
| AluI | AGCT | 7 cut(s) | 29, 124, 208, 296, 437, 1196, 1261 |
| Alw26I | GTCTC | 3 cut(s) | 78, 1072, 1338 |
| AlwI | GGATC | 2 cut(s) | 659, 1230 |
| Ama87I | CYCGRG | 1 cut(s) | 1254 |
| AoxI | GGCC | 6 cut(s) | 23, 311, 354, 822, 979, 1086 |
| ApoI | RAATTY | 2 cut(s) | 284, 1292 |
| AseI | ATTAAT | 1 cut(s) | 705 |
| Asp718I | GGTACC | 1 cut(s) | 1236 |
| AspLEI | GCGC | 1 cut(s) | 731 |
| AspS9I | GGNCC | 2 cut(s) | 354, 823 |
| AsuHPI | GGTGA | 2 cut(s) | 269, 935 |
| AvaI | CYCGRG | 1 cut(s) | 1254 |
| BaeGI | GKGCMC | 2 cut(s) | 463, 993 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 367, 400 |
| BalI | TGGCCA | 3 cut(s) | 25, 313, 981 |
| BanI | GGYRCC | 1 cut(s) | 1236 |
| BbsI | GAAGAC | 2 cut(s) | 342, 560 |
| BccI | CCATC | 4 cut(s) | 53, 248, 863, 1067 |
| BceAI | ACGGC | 1 cut(s) | 437 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 653, 687, 1232, 1266 |
| BciT130I | CCWGG | 3 cut(s) | 98, 1001, 1026 |
| BclI | TGATCA | 2 cut(s) | 31, 639 |
| BcoDI | GTCTC | 3 cut(s) | 78, 1072, 1338 |
| BcuI | ACTAGT | 1 cut(s) | 1333 |
| BfaI | CTAG | 6 cut(s) | 125, 846, 1103, 1161, 1226, 1334 |
| BfmI | CTRYAG | 3 cut(s) | 786, 1082, 1191 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 458 |
| BmcAI | AGTACT | 1 cut(s) | 168 |
| Bme1390I | CCNGG | 3 cut(s) | 98, 1001, 1026 |
| BmeT110I | CYCGRG | 1 cut(s) | 1254 |
| BmgT120I | GGNCC | 2 cut(s) | 354, 823 |
| BmiI | GGNNCC | 3 cut(s) | 451, 1057, 1238 |
| BmrFI | CCNGG | 3 cut(s) | 98, 1001, 1026 |
| BmsI | GCATC | 4 cut(s) | 577, 616, 661, 1240 |
| BpiI | GAAGAC | 2 cut(s) | 342, 560 |
| BpmI | CTGGAG | 1 cut(s) | 1042 |
| Bsa29I | ATCGAT | 1 cut(s) | 663 |
| BsaBI | GATNNNNATC | 2 cut(s) | 243, 966 |
| BsaI | GGTCTC | 1 cut(s) | 78 |
| BsaJI | CCNNGG | 5 cut(s) | 9, 88, 97, 630, 1000 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1031, 1246 |
| Bse1I | ACTGG | 2 cut(s) | 26, 1251 |
| Bse3DI | GCAATG | 1 cut(s) | 870 |
| Bse8I | GATNNNNATC | 2 cut(s) | 243, 966 |
| BseBI | CCWGG | 3 cut(s) | 98, 1001, 1026 |
| BseCI | ATCGAT | 1 cut(s) | 663 |
| BseDI | CCNNGG | 5 cut(s) | 9, 88, 97, 630, 1000 |
| BseGI | GGATG | 3 cut(s) | 573, 1132, 1255 |
| BseJI | GATNNNNATC | 2 cut(s) | 243, 966 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1031, 1246 |
| BseMI | GCAATG | 1 cut(s) | 870 |
| BseMII | CTCAG | 1 cut(s) | 879 |
| BseNI | ACTGG | 2 cut(s) | 26, 1251 |
| BseSI | GKGCMC | 2 cut(s) | 463, 993 |
| BsgI | GTGCAG | 4 cut(s) | 347, 531, 543, 621 |
| Bsh1236I | CGCG | 1 cut(s) | 1242 |
| BshFI | GGCC | 6 cut(s) | 25, 313, 356, 824, 981, 1088 |
| BshNI | GGYRCC | 1 cut(s) | 1236 |
| BshVI | ATCGAT | 1 cut(s) | 663 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1254 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1031, 1246 |
| BsmAI | GTCTC | 3 cut(s) | 78, 1072, 1338 |
| BsmBI | CGTCTC | 2 cut(s) | 1072, 1338 |
| BsmI | GAATGC | 1 cut(s) | 908 |
| BsnI | GGCC | 6 cut(s) | 25, 313, 356, 824, 981, 1088 |
| Bso31I | GGTCTC | 1 cut(s) | 78 |
| BsoBI | CYCGRG | 1 cut(s) | 1254 |
| Bsp1286I | GDGCHC | 2 cut(s) | 463, 993 |
| Bsp143I | GATC | 4 cut(s) | 31, 639, 664, 1222 |
| Bsp19I | CCATGG | 1 cut(s) | 9 |
| BspACI | CCGC | 3 cut(s) | 1089, 1240, 1264 |
| BspANI | GGCC | 6 cut(s) | 25, 313, 356, 824, 981, 1088 |
| BspCNI | CTCAG | 1 cut(s) | 880 |
| BspDI | ATCGAT | 1 cut(s) | 663 |
| BspFNI | CGCG | 1 cut(s) | 1242 |
| BspLI | GGNNCC | 3 cut(s) | 451, 1057, 1238 |
| BspMAI | CTGCAG | 3 cut(s) | 790, 1086, 1195 |
| BspPI | GGATC | 2 cut(s) | 659, 1230 |
| BspT107I | GGYRCC | 1 cut(s) | 1236 |
| BspTNI | GGTCTC | 1 cut(s) | 78 |
| BsrDI | GCAATG | 1 cut(s) | 870 |
| BsrI | ACTGG | 2 cut(s) | 26, 1251 |
| BssECI | CCNNGG | 5 cut(s) | 9, 88, 97, 630, 1000 |
| BssMI | GATC | 4 cut(s) | 31, 639, 664, 1222 |
| BssT1I | CCWWGG | 3 cut(s) | 9, 88, 630 |
| Bst2UI | CCWGG | 3 cut(s) | 98, 1001, 1026 |
| Bst6I | CTCTTC | 1 cut(s) | 1212 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 428 |
| BstC8I | GCNNGC | 4 cut(s) | 27, 604, 1079, 1086 |
| BstDEI | CTNAG | 3 cut(s) | 827, 888, 1271 |
| BstDSI | CCRYGG | 1 cut(s) | 9 |
| BstF5I | GGATG | 3 cut(s) | 573, 1132, 1255 |
| BstFNI | CGCG | 1 cut(s) | 1242 |
| BstHHI | GCGC | 1 cut(s) | 731 |
| BstKTI | GATC | 4 cut(s) | 34, 642, 667, 1225 |
| BstMAI | GTCTC | 3 cut(s) | 78, 1072, 1338 |
| BstMBI | GATC | 4 cut(s) | 31, 639, 664, 1222 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 428, 458, 521, 860 |
| BstNI | CCWGG | 3 cut(s) | 98, 1001, 1026 |
| BstNSI | RCATGY | 3 cut(s) | 1015, 1081, 1312 |
| BstSCI | CCNGG | 3 cut(s) | 96, 999, 1024 |
| BstSFI | CTRYAG | 3 cut(s) | 786, 1082, 1191 |
| BstSLI | GKGCMC | 2 cut(s) | 463, 993 |
| BstUI | CGCG | 1 cut(s) | 1242 |
| BstV2I | GAAGAC | 2 cut(s) | 342, 560 |
| BstX2I | RGATCY | 1 cut(s) | 1222 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 104 |
| BstYI | RGATCY | 1 cut(s) | 1222 |
| Bsu15I | ATCGAT | 1 cut(s) | 663 |
| BsuRI | GGCC | 6 cut(s) | 25, 313, 356, 824, 981, 1088 |
| BsuTUI | ATCGAT | 1 cut(s) | 663 |
| BtgI | CCRYGG | 1 cut(s) | 9 |
| BtsCI | GGATG | 3 cut(s) | 573, 1132, 1255 |
| BtsI | GCAGTG | 1 cut(s) | 991 |
| BtsIMutI | CAGTG | 1 cut(s) | 991 |
| Cac8I | GCNNGC | 4 cut(s) | 27, 604, 1079, 1086 |
| CfoI | GCGC | 1 cut(s) | 731 |
| Cfr13I | GGNCC | 2 cut(s) | 354, 823 |
| ClaI | ATCGAT | 1 cut(s) | 663 |
| Csp6I | GTAC | 6 cut(s) | 167, 384, 894, 1015, 1041, 1237 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 720, 755, 1167, 1202 |
| CviAII | CATG | 4 cut(s) | 10, 1012, 1078, 1309 |
| CviQI | GTAC | 6 cut(s) | 167, 384, 894, 1015, 1041, 1237 |
| DdeI | CTNAG | 3 cut(s) | 827, 888, 1271 |
| DpnI | GATC | 4 cut(s) | 33, 641, 666, 1224 |
| DpnII | GATC | 4 cut(s) | 31, 639, 664, 1222 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 92 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 92 |
| EaeI | YGGCCR | 3 cut(s) | 23, 311, 979 |
| Eam1104I | CTCTTC | 1 cut(s) | 1212 |
| EarI | CTCTTC | 1 cut(s) | 1212 |
| Eco130I | CCWWGG | 3 cut(s) | 9, 88, 630 |
| Eco31I | GGTCTC | 1 cut(s) | 78 |
| Eco32I | GATATC | 1 cut(s) | 1174 |
| Eco88I | CYCGRG | 1 cut(s) | 1254 |
| EcoO109I | RGGNCCY | 1 cut(s) | 823 |
| EcoRII | CCWGG | 3 cut(s) | 96, 999, 1024 |
| EcoRV | GATATC | 1 cut(s) | 1174 |
| EcoT14I | CCWWGG | 3 cut(s) | 9, 88, 630 |
| EcoT22I | ATGCAT | 1 cut(s) | 592 |
| ErhI | CCWWGG | 3 cut(s) | 9, 88, 630 |
| Esp3I | CGTCTC | 2 cut(s) | 1072, 1338 |
| FaeI | CATG | 4 cut(s) | 13, 1015, 1081, 1312 |
| FatI | CATG | 4 cut(s) | 9, 1011, 1077, 1308 |
| FbaI | TGATCA | 2 cut(s) | 31, 639 |
| FokI | GGATG | 3 cut(s) | 580, 1139, 1262 |
| FspBI | CTAG | 6 cut(s) | 125, 846, 1103, 1161, 1226, 1334 |
| GlaI | GCGC | 1 cut(s) | 730 |
| GsuI | CTGGAG | 1 cut(s) | 1042 |
| HaeIII | GGCC | 6 cut(s) | 25, 313, 356, 824, 981, 1088 |
| HhaI | GCGC | 1 cut(s) | 731 |
| Hin1II | CATG | 4 cut(s) | 13, 1015, 1081, 1312 |
| Hin6I | GCGC | 1 cut(s) | 729 |
| HinP1I | GCGC | 1 cut(s) | 729 |
| HinfI | GANTC | 4 cut(s) | 93, 967, 1062, 1315 |
| HphI | GGTGA | 2 cut(s) | 269, 935 |
| Hpy166II | GTNNAC | 3 cut(s) | 303, 894, 1339 |
| Hpy188I | TCNGA | 3 cut(s) | 639, 1072, 1120 |
| Hpy188III | TCNNGA | 7 cut(s) | 251, 668, 899, 1059, 1256, 1277, 1319 |
| Hpy8I | GTNNAC | 3 cut(s) | 303, 894, 1339 |
| HpyAV | CCTTC | 4 cut(s) | 462, 719, 1161, 1226 |
| HpyCH4IV | ACGT | 1 cut(s) | 652 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 428, 458, 521, 860 |
| HpyF3I | CTNAG | 3 cut(s) | 827, 888, 1271 |
| HpySE526I | ACGT | 1 cut(s) | 652 |
| Hsp92II | CATG | 4 cut(s) | 13, 1015, 1081, 1312 |
| HspAI | GCGC | 1 cut(s) | 729 |
| KpnI | GGTACC | 1 cut(s) | 1240 |
| Ksp22I | TGATCA | 2 cut(s) | 31, 639 |
| Kzo9I | GATC | 4 cut(s) | 31, 639, 664, 1222 |
| LmnI | GCTCC | 3 cut(s) | 63, 449, 1061 |
| LweI | GCATC | 4 cut(s) | 577, 616, 661, 1240 |
| MaeI | CTAG | 6 cut(s) | 125, 846, 1103, 1161, 1226, 1334 |
| MaeII | ACGT | 1 cut(s) | 652 |
| MaeIII | GTNAC | 3 cut(s) | 52, 366, 374 |
| MalI | GATC | 4 cut(s) | 33, 641, 666, 1224 |
| MboI | GATC | 4 cut(s) | 31, 639, 664, 1222 |
| MboII | GAAGA | 7 cut(s) | 347, 565, 596, 668, 914, 1229, 1292 |
| MflI | RGATCY | 1 cut(s) | 1222 |
| MhlI | GDGCHC | 2 cut(s) | 463, 993 |
| MlsI | TGGCCA | 3 cut(s) | 25, 313, 981 |
| MluCI | AATT | 7 cut(s) | 102, 108, 284, 498, 611, 702, 1292 |
| MluNI | TGGCCA | 3 cut(s) | 25, 313, 981 |
| MlyI | GAGTC | 2 cut(s) | 102, 1324 |
| MmeI | TCCRAC | 1 cut(s) | 899 |
| MnlI | CCTC | 7 cut(s) | 168, 640, 805, 814, 1117, 1177, 1213 |
| Mox20I | TGGCCA | 3 cut(s) | 25, 313, 981 |
| Mph1103I | ATGCAT | 1 cut(s) | 592 |
| MscI | TGGCCA | 3 cut(s) | 25, 313, 981 |
| MseI | TTAA | 6 cut(s) | 360, 399, 540, 705, 719, 1134 |
| Msp20I | TGGCCA | 3 cut(s) | 25, 313, 981 |
| MspA1I | CMGCKG | 2 cut(s) | 29, 1196 |
| MspR9I | CCNGG | 3 cut(s) | 98, 1001, 1026 |
| Mva1269I | GAATGC | 1 cut(s) | 908 |
| MvaI | CCWGG | 3 cut(s) | 98, 1001, 1026 |
| MvnI | CGCG | 1 cut(s) | 1242 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 428, 458, 521, 860 |
| NcoI | CCATGG | 1 cut(s) | 9 |
| NdeII | GATC | 4 cut(s) | 31, 639, 664, 1222 |
| NlaIII | CATG | 4 cut(s) | 13, 1015, 1081, 1312 |
| NlaIV | GGNNCC | 3 cut(s) | 451, 1057, 1238 |
| NmeAIII | GCCGAG | 1 cut(s) | 1120 |
| NsiI | ATGCAT | 1 cut(s) | 592 |
| NspI | RCATGY | 3 cut(s) | 1015, 1081, 1312 |
| PaeI | GCATGC | 1 cut(s) | 1081 |
| PaeR7I | CTCGAG | 1 cut(s) | 1254 |
| PciI | ACATGT | 2 cut(s) | 1011, 1308 |
| PctI | GAATGC | 1 cut(s) | 908 |
| PfeI | GAWTC | 2 cut(s) | 967, 1062 |
| PflFI | GACNNNGTC | 1 cut(s) | 246 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1031 |
| PleI | GAGTC | 2 cut(s) | 101, 1323 |
| PpsI | GAGTC | 2 cut(s) | 101, 1323 |
| PscI | ACATGT | 2 cut(s) | 1011, 1308 |
| PshBI | ATTAAT | 1 cut(s) | 705 |
| PsiI | TTATAA | 1 cut(s) | 18 |
| Psp6I | CCWGG | 3 cut(s) | 96, 999, 1024 |
| PspGI | CCWGG | 3 cut(s) | 96, 999, 1024 |
| PspN4I | GGNNCC | 3 cut(s) | 451, 1057, 1238 |
| PspPI | GGNCC | 2 cut(s) | 354, 823 |
| PstI | CTGCAG | 3 cut(s) | 790, 1086, 1195 |
| PsuI | RGATCY | 1 cut(s) | 1222 |
| PsyI | GACNNNGTC | 1 cut(s) | 246 |
| PvuII | CAGCTG | 2 cut(s) | 29, 1196 |
| RsaI | GTAC | 6 cut(s) | 168, 385, 895, 1016, 1042, 1238 |
| RsaNI | GTAC | 6 cut(s) | 167, 384, 894, 1015, 1041, 1237 |
| SaqAI | TTAA | 6 cut(s) | 360, 399, 540, 705, 719, 1134 |
| Sau3AI | GATC | 4 cut(s) | 31, 639, 664, 1222 |
| Sau96I | GGNCC | 2 cut(s) | 354, 823 |
| ScaI | AGTACT | 1 cut(s) | 168 |
| SchI | GAGTC | 2 cut(s) | 102, 1324 |
| ScrFI | CCNGG | 3 cut(s) | 98, 1001, 1026 |
| SduI | GDGCHC | 2 cut(s) | 463, 993 |
| SfaNI | GCATC | 4 cut(s) | 577, 616, 661, 1240 |
| SfcI | CTRYAG | 3 cut(s) | 786, 1082, 1191 |
| Sfr274I | CTCGAG | 1 cut(s) | 1254 |
| SlaI | CTCGAG | 1 cut(s) | 1254 |
| SmlI | CTYRAG | 1 cut(s) | 1254 |
| SmoI | CTYRAG | 1 cut(s) | 1254 |
| SpeI | ACTAGT | 1 cut(s) | 1333 |
| SphI | GCATGC | 1 cut(s) | 1081 |
| Sse9I | AATT | 7 cut(s) | 102, 108, 284, 498, 611, 702, 1292 |
| SsiI | CCGC | 3 cut(s) | 1089, 1240, 1264 |
| SspI | AATATT | 2 cut(s) | 72, 931 |
| SspMI | CTAG | 6 cut(s) | 125, 846, 1103, 1161, 1226, 1334 |
| StyD4I | CCNGG | 3 cut(s) | 96, 999, 1024 |
| StyI | CCWWGG | 3 cut(s) | 9, 88, 630 |
| TaiI | ACGT | 1 cut(s) | 655 |
| TaqI | TCGA | 3 cut(s) | 391, 663, 1255 |
| TasI | AATT | 7 cut(s) | 102, 108, 284, 498, 611, 702, 1292 |
| TatI | WGTACW | 2 cut(s) | 166, 893 |
| TauI | GCSGC | 1 cut(s) | 1091 |
| TfiI | GAWTC | 2 cut(s) | 967, 1062 |
| Tru1I | TTAA | 6 cut(s) | 360, 399, 540, 705, 719, 1134 |
| Tru9I | TTAA | 6 cut(s) | 360, 399, 540, 705, 719, 1134 |
| TscAI | CASTG | 1 cut(s) | 998 |
| TspDTI | ATGAA | 5 cut(s) | 216, 276, 297, 584, 597 |
| TspGWI | ACGGA | 1 cut(s) | 565 |
| TspRI | CASTG | 1 cut(s) | 998 |
| Tth111I | GACNNNGTC | 1 cut(s) | 246 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1031 |
| VspI | ATTAAT | 1 cut(s) | 705 |
| XapI | RAATTY | 2 cut(s) | 284, 1292 |
| XceI | RCATGY | 3 cut(s) | 1015, 1081, 1312 |
| XhoI | CTCGAG | 1 cut(s) | 1254 |
| XspI | CTAG | 6 cut(s) | 125, 846, 1103, 1161, 1226, 1334 |
| ZrmI | AGTACT | 1 cut(s) | 168 |
| Zsp2I | ATGCAT | 1 cut(s) | 592 |