Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0008621

Physical Location & Seq

Genomic Coordinates Forward (+)

24929539 .. 24953026

Gene Structure 23488 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG151600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1539 bp

ATGTGGCGAATACTAAACAGGTTGCATGACAGAAATGAAACAATGTACTATAAAGTTTTGATTGCCAAGATTGCGGAATATGCACCTATAGTCTACACTCCTACTGTTGGACTTGTCTGCCAGAATTACAGTGGTTTGTTTAGAAGGCCCAGGGGAATGTACTTTAGTGCGGAAGATCGTGGAGAAATGATGTCTATGGTTTATAATTGGCCAGCTGATCAGGTTGATATGATTGTTGTCACGGATGGGAGTAGAATATTGGGTCTTGGAGACCTTGGAGTCCAGGGAATTGGAATCTCAATTGGGAAGCTGGATTTATACGTTGCTGCTGCTGGAATAAACCCTCAAAGGGTACTGCCTGTGATGATTGATGTTGGAACCGACAATGAAAAGCTGCTAAAAGACCCATTGTATTTGGGATTGCAAAGACACCGTCTTGATGGTGATGAGTATCTTGCTGTTATCGATGAATTCATGGAAGCAGTTTTTACTCGTTGGCCGCATGTGATTGTGCAGTTTGAAGATTTTCAAAGCAAGTGGGCCTTTAAGTTGTTACAGCGTTACAGAAATACTTTTAGAATGTTTAATGATGATGTTCAGGGTACAGCAGGAGTTGCAATTGCTGGGCTTTTAGGAGCTGTAAGGGCACAAGGGAGTCAAATGATTGACTTCCCCAAACAAAAGATTGTTGTTGCAGGTGCTGGAAGTGCAGGAATAGGGGTTTTAAATGCTGCACGGAAAACAATGGCAAGGATGTTAGGAAATAATGAACATGCATTTGAGAGTGCAGGCAGACAATTCTGGGTAGTTGATGCCAATGGCCTGATCACAGACGAACGCGAAAATGTTGATCCTGATGCGCGACCATTTGCAAGGAAATCCAAAGAAATTCACCGTCAAGGATTGAGGGAAGGTGCAAGTCTTGTGGAAGTGGTTCAACAAGTGAAGCCTGATGTGCTTCTTGGTCTTTCTGCAGTCGGGGGACTGTTCTCAAAGGAGGTATTAGAGGCCCTTAGAGGTTCAACTTCAACTAGACCAGCCATCTTTGCAATGTCAAATCCAACAAACAATGCTGAGTGCACTCCTGAAGAAGCATTTTCCATTGTGGGGGACAATGTTGTTTTTGCAAGTGGAAGTCCATTCAAAGACGTAGATCTCGGAAATGGCCATATCGGGCACTGCAACCAGGGTAACAACATGTACCTTTTCCCAGGTATTGGACTTGGTACTCTCTTATCTGGTTCCAGAGTTATCTCCGATGGGATGCTACAGGTGGCAGCAGAGTGCCTAGCTGCATATATGACAGATGAGGAGGTTCTAAAAGGGGTTATATACCCTTCAATATCTAGCATACGAGATATAACAAAGAAGGTGGCTGTGGCTGTAATAAAAGAAGCCCTAGATGAGGATCTAGCAGAAGGGTACCGTGAAATGGATGCCCGAGAGCTCCAGAAACTCAATCAGGAAGAAATTGAAGAATATGTGCAGAACAACATGTGGAGTCCAGAATACCCCACACTAGTTTATAAAAAGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004470 GO:0004471 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006082 GO:0006090 GO:0006108 GO:0006950 GO:0006970 GO:0008144 GO:0008150 GO:0008152 GO:0008270 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0009987 GO:0016491 GO:0016614 GO:0016615 GO:0016616 GO:0017076 GO:0019752 GO:0030554 GO:0031974 GO:0032553 GO:0032555 GO:0032559 GO:0032787 GO:0035639 GO:0036094 GO:0042802 GO:0042803 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043648 GO:0044237 GO:0044281 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0046914 GO:0046983 GO:0050896 GO:0050897 GO:0055114 GO:0070013 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00620 ko00710 ko01100 ko01120 ko01200 map00620 map00710 map01100 map01120 map01200

Pfam Domains

Protein Families

Malic_M malic

Protein Analysis

512

Amino Acids

56.69

Weight (kDa)

5.18

Isoelectric Point (pI)

29.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
malic	PF00390	9 - 189	4.9e-76	Malic enzyme, N-terminal domain
Malic_M	PF03949	199 - 466	2.2e-89	Malic enzyme, NAD binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008621)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G13560
fragaria_vesca	FvH4_7g08630 FvH4_7g08630 FvH4_7g08630 FvH4_7g08630 FvH4_7g08630 FvH4_7g08630
malus_domestica	MD02G1226700.v1.1 MD07G1087300.v1.1
prunus_persica	Prupe.2G114100_v2.0.a1
pyrus_communis	pycom02g19570 pycom07g06980
rosa_chinensis	RchiOBHm_Chr1g0343641
rosa_laevigata	RLG00000028958
rosa_multiflora	Rmu_sc0000021.1_g000007
rosa_roxburghii	Rroxscaffold_4G00310420
rosa_rugosa	Rorug01G0167900 Rorug01G0167900
rosa_samantha	Rh1AG184000 Rh1BG151600 Rh1CG170900 Rh1DG183500
rosa_wichuraiana	Rw1G015250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	204, 1527
AarI	CACCTGC	1 cut(s)	686
AasI	GACNNNNNNGTC	1 cut(s)	278
Acc36I	ACCTGC	1 cut(s)	686
Acc65I	GGTACC	1 cut(s)	1422
AccB1I	GGYRCC	1 cut(s)	1422
AccB7I	CCANNNNNTGG	1 cut(s)	1217
AccI	GTMKAC	1 cut(s)	93
AccII	CGCG	2 cut(s)	840, 862
AciI	CCGC	3 cut(s)	74, 170, 500
AclWI	GGATC	2 cut(s)	845, 1416
AcoI	YGGCCR	3 cut(s)	209, 497, 1165
AcsI	RAATTY	2 cut(s)	470, 888
AcuI	CTGAAG	1 cut(s)	1107
AfaI	GTAC	7 cut(s)	47, 161, 354, 604, 1202, 1228, 1424
AfiI	CCNNNNNNNGG	6 cut(s)	107, 349, 1107, 1217, 1405, 1432
AflIII	ACRYGT	2 cut(s)	1197, 1494
AgsI	TTSAA	8 cut(s)	521, 530, 938, 1023, 1029, 1144, 1341, 1475
AhlI	ACTAGT	1 cut(s)	1519
AjnI	CCWGG	4 cut(s)	149, 282, 1185, 1210
AluBI	AGCT	6 cut(s)	215, 310, 394, 638, 1292, 1447
AluI	AGCT	6 cut(s)	215, 310, 394, 638, 1292, 1447
Alw21I	GWGCWC	2 cut(s)	1082, 1449
Alw26I	GTCTC	1 cut(s)	264
Alw44I	GTGCAC	1 cut(s)	1078
AlwI	GGATC	2 cut(s)	845, 1416
AlwNI	CAGNNNCTG	1 cut(s)	701
Ama87I	CYCGRG	1 cut(s)	1440
AoxI	GGCC	7 cut(s)	146, 209, 497, 540, 820, 1008, 1165
ApaLI	GTGCAC	1 cut(s)	1078
ApeKI	GCWGC	6 cut(s)	326, 329, 394, 731, 1277, 1292
ApoI	RAATTY	2 cut(s)	470, 888
ArsI	GACNNNNNNTTYG	2 cut(s)	418, 450
Asp700I	GAANNNNTTC	2 cut(s)	525, 933
Asp718I	GGTACC	1 cut(s)	1422
AspLEI	GCGC	1 cut(s)	862
AspS9I	GGNCC	3 cut(s)	147, 540, 1009
AsuHPI	GGTGA	2 cut(s)	455, 884
AvaI	CYCGRG	1 cut(s)	1440
BaeGI	GKGCMC	3 cut(s)	649, 1082, 1179
BalI	TGGCCA	2 cut(s)	211, 1167
BanI	GGYRCC	1 cut(s)	1422
BanII	GRGCYC	1 cut(s)	1449
Bbv12I	GWGCWC	2 cut(s)	1082, 1449
BbvI	GCAGC	6 cut(s)	313, 316, 381, 718, 1279, 1289
BccI	CCATC	4 cut(s)	239, 434, 1049, 1253
BciT130I	CCWGG	4 cut(s)	151, 284, 1187, 1212
BclI	TGATCA	2 cut(s)	217, 825
BcoDI	GTCTC	1 cut(s)	264
BcuI	ACTAGT	1 cut(s)	1519
BfaI	CTAG	6 cut(s)	1032, 1289, 1347, 1400, 1412, 1520
BfmI	CTRYAG	3 cut(s)	87, 972, 1268
BfuAI	ACCTGC	1 cut(s)	686
BglII	AGATCT	1 cut(s)	1153
BisI	GCNGC	7 cut(s)	327, 330, 395, 500, 732, 1278, 1293
BlsI	GCNGC	7 cut(s)	328, 331, 396, 501, 733, 1279, 1294
Bme1390I	CCNGG	4 cut(s)	151, 284, 1187, 1212
BmeT110I	CYCGRG	1 cut(s)	1440
BmgT120I	GGNCC	3 cut(s)	147, 540, 1009
BmiI	GGNNCC	3 cut(s)	379, 1243, 1424
BmrFI	CCNGG	4 cut(s)	151, 284, 1187, 1212
BmsI	GCATC	4 cut(s)	802, 847, 1254, 1426
BpmI	CTGGAG	1 cut(s)	1433
Bsa29I	ATCGAT	1 cut(s)	465
BsaBI	GATNNNNATC	2 cut(s)	450, 1407
BsaI	GGTCTC	1 cut(s)	264
BsaJI	CCNNGG	6 cut(s)	149, 150, 274, 283, 1186, 1210
Bsc4I	CCNNNNNNNGG	6 cut(s)	107, 349, 1107, 1217, 1405, 1432
Bse3DI	GCAATG	1 cut(s)	1056
Bse8I	GATNNNNATC	2 cut(s)	450, 1407
BseBI	CCWGG	4 cut(s)	151, 284, 1187, 1212
BseCI	ATCGAT	1 cut(s)	465
BseDI	CCNNGG	6 cut(s)	149, 150, 274, 283, 1186, 1210
BseGI	GGATG	4 cut(s)	250, 759, 1269, 1441
BseJI	GATNNNNATC	2 cut(s)	450, 1407
BseLI	CCNNNNNNNGG	6 cut(s)	107, 349, 1107, 1217, 1405, 1432
BseMI	GCAATG	1 cut(s)	1056
BseMII	CTCAG	1 cut(s)	1065
BseRI	GAGGAG	1 cut(s)	1325
BseSI	GKGCMC	3 cut(s)	649, 1082, 1179
BseXI	GCAGC	6 cut(s)	313, 316, 381, 718, 1279, 1289
BseYI	CCCAGC	1 cut(s)	623
BsgI	GTGCAG	5 cut(s)	533, 717, 729, 807, 1505
Bsh1236I	CGCG	2 cut(s)	840, 862
BshFI	GGCC	7 cut(s)	148, 211, 499, 542, 822, 1010, 1167
BshNI	GGYRCC	1 cut(s)	1422
BshVI	ATCGAT	1 cut(s)	465
BsiHKAI	GWGCWC	2 cut(s)	1082, 1449
BsiHKCI	CYCGRG	1 cut(s)	1440
BslFI	GGGAC	2 cut(s)	996, 1124
BslI	CCNNNNNNNGG	6 cut(s)	107, 349, 1107, 1217, 1405, 1432
BsmAI	GTCTC	1 cut(s)	264
BsmFI	GGGAC	2 cut(s)	996, 1124
BsnI	GGCC	7 cut(s)	148, 211, 499, 542, 822, 1010, 1167
Bso31I	GGTCTC	1 cut(s)	264
BsoBI	CYCGRG	1 cut(s)	1440
Bsp1286I	GDGCHC	4 cut(s)	649, 1082, 1179, 1449
Bsp143I	GATC	6 cut(s)	175, 217, 825, 850, 1153, 1408
BspACI	CCGC	3 cut(s)	74, 170, 500
BspANI	GGCC	7 cut(s)	148, 211, 499, 542, 822, 1010, 1167
BspCNI	CTCAG	1 cut(s)	1066
BspDI	ATCGAT	1 cut(s)	465
BspFNI	CGCG	2 cut(s)	840, 862
BspLI	GGNNCC	3 cut(s)	379, 1243, 1424
BspMAI	CTGCAG	1 cut(s)	976
BspMI	ACCTGC	1 cut(s)	686
BspPI	GGATC	2 cut(s)	845, 1416
BspT107I	GGYRCC	1 cut(s)	1422
BspTNI	GGTCTC	1 cut(s)	264
BsrDI	GCAATG	1 cut(s)	1056
BssECI	CCNNGG	6 cut(s)	149, 150, 274, 283, 1186, 1210
BssMI	GATC	6 cut(s)	175, 217, 825, 850, 1153, 1408
BssT1I	CCWWGG	1 cut(s)	274
Bst2UI	CCWGG	4 cut(s)	151, 284, 1187, 1212
Bst4CI	ACNGT	6 cut(s)	106, 131, 434, 896, 987, 1427
BstAPI	GCANNNNNTGC	1 cut(s)	614
BstC8I	GCNNGC	2 cut(s)	213, 790
BstDEI	CTNAG	2 cut(s)	1013, 1074
BstENI	CCTNNNNNAGG	1 cut(s)	1403
BstF5I	GGATG	4 cut(s)	250, 759, 1269, 1441
BstFNI	CGCG	2 cut(s)	840, 862
BstHHI	GCGC	1 cut(s)	862
BstKTI	GATC	6 cut(s)	178, 220, 828, 853, 1156, 1411
BstMAI	GTCTC	1 cut(s)	264
BstMBI	GATC	6 cut(s)	175, 217, 825, 850, 1153, 1408
BstMWI	GCNNNNNNNGC	7 cut(s)	71, 80, 614, 644, 707, 955, 1046
BstNI	CCWGG	4 cut(s)	151, 284, 1187, 1212
BstNSI	RCATGY	4 cut(s)	506, 776, 1201, 1498
BstSCI	CCNGG	4 cut(s)	149, 282, 1185, 1210
BstSFI	CTRYAG	3 cut(s)	87, 972, 1268
BstSLI	GKGCMC	3 cut(s)	649, 1082, 1179
BstUI	CGCG	2 cut(s)	840, 862
BstV1I	GCAGC	6 cut(s)	313, 316, 381, 718, 1279, 1289
BstX2I	RGATCY	2 cut(s)	1153, 1408
BstXI	CCANNNNNNTGG	1 cut(s)	290
BstYI	RGATCY	2 cut(s)	1153, 1408
Bsu15I	ATCGAT	1 cut(s)	465
BsuRI	GGCC	7 cut(s)	148, 211, 499, 542, 822, 1010, 1167
BsuTUI	ATCGAT	1 cut(s)	465
BtsCI	GGATG	4 cut(s)	250, 759, 1269, 1441
BtsI	GCAGTG	1 cut(s)	1177
BtsIMutI	CAGTG	2 cut(s)	136, 1177
BveI	ACCTGC	1 cut(s)	686
Cac8I	GCNNGC	2 cut(s)	213, 790
CaiI	CAGNNNCTG	1 cut(s)	701
CfoI	GCGC	1 cut(s)	862
Cfr13I	GGNCC	3 cut(s)	147, 540, 1009
ClaI	ATCGAT	1 cut(s)	465
Csp6I	GTAC	7 cut(s)	46, 160, 353, 603, 1201, 1227, 1423
CspCI	CAANNNNNGTGG	6 cut(s)	518, 553, 906, 941, 1353, 1388
CviAII	CATG	6 cut(s)	26, 475, 503, 773, 1198, 1495
CviQI	GTAC	7 cut(s)	46, 160, 353, 603, 1201, 1227, 1423
DdeI	CTNAG	2 cut(s)	1013, 1074
DpnI	GATC	6 cut(s)	177, 219, 827, 852, 1155, 1410
DpnII	GATC	6 cut(s)	175, 217, 825, 850, 1153, 1408
DraI	TTTAAA	1 cut(s)	726
DrdI	GACNNNNNNGTC	1 cut(s)	278
DseDI	GACNNNNNNGTC	1 cut(s)	278
EaeI	YGGCCR	3 cut(s)	209, 497, 1165
Ecl136II	GAGCTC	1 cut(s)	1447
Eco130I	CCWWGG	1 cut(s)	274
Eco24I	GRGCYC	1 cut(s)	1449
Eco31I	GGTCTC	1 cut(s)	264
Eco53kI	GAGCTC	1 cut(s)	1447
Eco57I	CTGAAG	1 cut(s)	1107
Eco88I	CYCGRG	1 cut(s)	1440
EcoICRI	GAGCTC	1 cut(s)	1447
EcoNI	CCTNNNNNAGG	1 cut(s)	1403
EcoO109I	RGGNCCY	1 cut(s)	1009
EcoRI	GAATTC	1 cut(s)	470
EcoRII	CCWGG	4 cut(s)	149, 282, 1185, 1210
EcoT14I	CCWWGG	1 cut(s)	274
EcoT22I	ATGCAT	1 cut(s)	778
EcoT38I	GRGCYC	1 cut(s)	1449
ErhI	CCWWGG	1 cut(s)	274
FaeI	CATG	6 cut(s)	29, 478, 506, 776, 1201, 1498
FalI	AAGNNNNNCTT	2 cut(s)	527, 559
FaqI	GGGAC	2 cut(s)	996, 1124
FatI	CATG	6 cut(s)	25, 474, 502, 772, 1197, 1494
FbaI	TGATCA	2 cut(s)	217, 825
FblI	GTMKAC	1 cut(s)	93
Fnu4HI	GCNGC	7 cut(s)	327, 330, 395, 500, 732, 1278, 1293
FokI	GGATG	4 cut(s)	257, 766, 1276, 1448
FriOI	GRGCYC	1 cut(s)	1449
Fsp4HI	GCNGC	7 cut(s)	327, 330, 395, 500, 732, 1278, 1293
FspBI	CTAG	6 cut(s)	1032, 1289, 1347, 1400, 1412, 1520
GlaI	GCGC	1 cut(s)	861
GluI	GCNGC	7 cut(s)	327, 330, 395, 500, 732, 1278, 1293
GsaI	CCCAGC	1 cut(s)	627
GsuI	CTGGAG	1 cut(s)	1433
HaeIII	GGCC	7 cut(s)	148, 211, 499, 542, 822, 1010, 1167
HhaI	GCGC	1 cut(s)	862
Hin1II	CATG	6 cut(s)	29, 478, 506, 776, 1201, 1498
Hin6I	GCGC	1 cut(s)	860
HinP1I	GCGC	1 cut(s)	860
HinfI	GANTC	4 cut(s)	279, 294, 655, 1501
HphI	GGTGA	2 cut(s)	455, 884
Hpy166II	GTNNAC	2 cut(s)	94, 1080
Hpy188I	TCNGA	2 cut(s)	1160, 1258
Hpy188III	TCNNGA	7 cut(s)	437, 854, 1085, 1245, 1450, 1463, 1505
Hpy8I	GTNNAC	2 cut(s)	94, 1080
HpyAV	CCTTC	5 cut(s)	138, 905, 1347, 1363, 1412
HpyCH4III	ACNGT	6 cut(s)	106, 131, 434, 896, 987, 1427
HpyCH4IV	ACGT	2 cut(s)	321, 1149
HpyF10VI	GCNNNNNNNGC	7 cut(s)	71, 80, 614, 644, 707, 955, 1046
HpyF3I	CTNAG	2 cut(s)	1013, 1074
HpySE526I	ACGT	2 cut(s)	321, 1149
Hsp92II	CATG	6 cut(s)	29, 478, 506, 776, 1201, 1498
HspAI	GCGC	1 cut(s)	860
KpnI	GGTACC	1 cut(s)	1426
Ksp22I	TGATCA	2 cut(s)	217, 825
Kzo9I	GATC	6 cut(s)	175, 217, 825, 850, 1153, 1408
LmnI	GCTCC	2 cut(s)	635, 1452
Lsp1109I	GCAGC	6 cut(s)	313, 316, 381, 718, 1279, 1289
LweI	GCATC	4 cut(s)	802, 847, 1254, 1426
MaeI	CTAG	6 cut(s)	1032, 1289, 1347, 1400, 1412, 1520
MaeII	ACGT	2 cut(s)	321, 1149
MaeIII	GTNAC	4 cut(s)	238, 552, 560, 1190
MalI	GATC	6 cut(s)	177, 219, 827, 852, 1155, 1410
MboI	GATC	6 cut(s)	175, 217, 825, 850, 1153, 1408
MboII	GAAGA	5 cut(s)	185, 533, 1100, 1478, 1487
MfeI	CAATTG	2 cut(s)	300, 618
MflI	RGATCY	2 cut(s)	1153, 1408
MhlI	GDGCHC	4 cut(s)	649, 1082, 1179, 1449
MlsI	TGGCCA	2 cut(s)	211, 1167
MluCI	AATT	9 cut(s)	124, 205, 288, 300, 470, 618, 797, 888, 1470
MluNI	TGGCCA	2 cut(s)	211, 1167
MlyI	GAGTC	3 cut(s)	288, 664, 1510
MmeI	TCCRAC	3 cut(s)	88, 355, 1085
MnlI	CCTC	8 cut(s)	354, 900, 991, 1000, 1010, 1303, 1306, 1399
Mox20I	TGGCCA	2 cut(s)	211, 1167
Mph1103I	ATGCAT	1 cut(s)	778
MroXI	GAANNNNTTC	2 cut(s)	525, 933
MscI	TGGCCA	2 cut(s)	211, 1167
MseI	TTAA	3 cut(s)	546, 585, 725
Msp20I	TGGCCA	2 cut(s)	211, 1167
MspA1I	CMGCKG	1 cut(s)	215
MspR9I	CCNGG	4 cut(s)	151, 284, 1187, 1212
MunI	CAATTG	2 cut(s)	300, 618
MvaI	CCWGG	4 cut(s)	151, 284, 1187, 1212
MvnI	CGCG	2 cut(s)	840, 862
MwoI	GCNNNNNNNGC	7 cut(s)	71, 80, 614, 644, 707, 955, 1046
NdeII	GATC	6 cut(s)	175, 217, 825, 850, 1153, 1408
NlaIII	CATG	6 cut(s)	29, 478, 506, 776, 1201, 1498
NlaIV	GGNNCC	3 cut(s)	379, 1243, 1424
NmuCI	GTSAC	1 cut(s)	238
NsiI	ATGCAT	1 cut(s)	778
NspI	RCATGY	4 cut(s)	506, 776, 1201, 1498
PaqCI	CACCTGC	1 cut(s)	686
PasI	CCCWGGG	1 cut(s)	150
PciI	ACATGT	2 cut(s)	1197, 1494
PdmI	GAANNNNTTC	2 cut(s)	525, 933
PfeI	GAWTC	1 cut(s)	294
PflFI	GACNNNGTC	1 cut(s)	432
PflMI	CCANNNNNTGG	1 cut(s)	1217
PkrI	GCNGC	7 cut(s)	328, 331, 396, 501, 733, 1279, 1294
PleI	GAGTC	3 cut(s)	287, 663, 1509
PpsI	GAGTC	3 cut(s)	287, 663, 1509
PscI	ACATGT	2 cut(s)	1197, 1494
PsiI	TTATAA	2 cut(s)	204, 1527
Psp124BI	GAGCTC	1 cut(s)	1449
Psp6I	CCWGG	4 cut(s)	149, 282, 1185, 1210
PspFI	CCCAGC	1 cut(s)	623
PspGI	CCWGG	4 cut(s)	149, 282, 1185, 1210
PspN4I	GGNNCC	3 cut(s)	379, 1243, 1424
PspPI	GGNCC	3 cut(s)	147, 540, 1009
PstI	CTGCAG	1 cut(s)	976
PstNI	CAGNNNCTG	1 cut(s)	701
PsuI	RGATCY	2 cut(s)	1153, 1408
PsyI	GACNNNGTC	1 cut(s)	432
PvuII	CAGCTG	1 cut(s)	215
RsaI	GTAC	7 cut(s)	47, 161, 354, 604, 1202, 1228, 1424
RsaNI	GTAC	7 cut(s)	46, 160, 353, 603, 1201, 1227, 1423
SacI	GAGCTC	1 cut(s)	1449
SaqAI	TTAA	3 cut(s)	546, 585, 725
SatI	GCNGC	7 cut(s)	327, 330, 395, 500, 732, 1278, 1293
Sau3AI	GATC	6 cut(s)	175, 217, 825, 850, 1153, 1408
Sau96I	GGNCC	3 cut(s)	147, 540, 1009
SchI	GAGTC	3 cut(s)	288, 664, 1510
ScrFI	CCNGG	4 cut(s)	151, 284, 1187, 1212
SduI	GDGCHC	4 cut(s)	649, 1082, 1179, 1449
SfaNI	GCATC	4 cut(s)	802, 847, 1254, 1426
SfcI	CTRYAG	3 cut(s)	87, 972, 1268
SpeI	ACTAGT	1 cut(s)	1519
Sse9I	AATT	9 cut(s)	124, 205, 288, 300, 470, 618, 797, 888, 1470
SsiI	CCGC	3 cut(s)	74, 170, 500
SspI	AATATT	1 cut(s)	258
SspMI	CTAG	6 cut(s)	1032, 1289, 1347, 1400, 1412, 1520
SstI	GAGCTC	1 cut(s)	1449
StyD4I	CCNGG	4 cut(s)	149, 282, 1185, 1210
StyI	CCWWGG	1 cut(s)	274
TaaI	ACNGT	6 cut(s)	106, 131, 434, 896, 987, 1427
TaiI	ACGT	2 cut(s)	324, 1152
TaqI	TCGA	1 cut(s)	465
TasI	AATT	9 cut(s)	124, 205, 288, 300, 470, 618, 797, 888, 1470
TatI	WGTACW	2 cut(s)	45, 159
TauI	GCSGC	1 cut(s)	502
TfiI	GAWTC	1 cut(s)	294
Tru1I	TTAA	3 cut(s)	546, 585, 725
Tru9I	TTAA	3 cut(s)	546, 585, 725
TscAI	CASTG	2 cut(s)	136, 1184
TseFI	GTSAC	1 cut(s)	238
TseI	GCWGC	6 cut(s)	326, 329, 394, 731, 1277, 1292
Tsp45I	GTSAC	1 cut(s)	238
TspDTI	ATGAA	5 cut(s)	51, 402, 463, 483, 783
TspGWI	ACGGA	2 cut(s)	257, 751
TspRI	CASTG	2 cut(s)	136, 1184
Tth111I	GACNNNGTC	1 cut(s)	432
Van91I	CCANNNNNTGG	1 cut(s)	1217
VneI	GTGCAC	1 cut(s)	1078
XagI	CCTNNNNNAGG	1 cut(s)	1403
XapI	RAATTY	2 cut(s)	470, 888
XceI	RCATGY	4 cut(s)	506, 776, 1201, 1498
XcmI	CCANNNNNNNNNTGG	1 cut(s)	128
XmiI	GTMKAC	1 cut(s)	93
XmnI	GAANNNNTTC	2 cut(s)	525, 933
XspI	CTAG	6 cut(s)	1032, 1289, 1347, 1400, 1412, 1520
Zsp2I	ATGCAT	1 cut(s)	778

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.