Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0014218

Physical Location & Seq

Genomic Coordinates Reverse (-)

7609236 .. 7616342

Gene Structure 7107 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G17510.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2802 bp

ATGTTGCAGAGCAAAGTTTTCAATAAGAAAACCAGAGGAGGAAGAATCCAAAAGCAAGTAAGAGAGGTTTATCTACGAGATGACATATACTGTGGAGCTTTCTCTTGCAAGTCTTGTGATTCTTCAGCTGCTCGTTTGTCTTCCTCTAAGATAATCGTTGTTGATACCAACGTCGTTCTTCACCAAATTGATTTGTTGGAAAATAAGGCTATAGACACTGTTGTTGTTCTGTCTGTGGTGTTGGACGAAGTTAAGAACAGGAATAGATCGGTTTACAATAGAATCAGACTTCTCTGCAGCAATCCAGCGAGACAATTCTATGTTTTCTCCAATCATGTCCACAAGGATACTTATGTGCAAGCCATGGAGAAAGAGAGTGCAAATGACCACAACGATAGAGCTATTCGCGTCGCTACTCTATGGTACCAGAAGCATCTAGGGGATACATCTCAGGTGTTGCTTGTAACTAATGATAGGGAAAATAAACGGAAGGCCACTGAAGAGGGAATATCTGCGGAGACAATTGAGGCTTATGTTAAATCACTTGGACAACCTGAATTGCTGGATCTGCTTGCCCAACCAACCAATGAAGACATAACTATGGAAGATGCAGATGATTCTAGACCTTCGAAGAGGAAACTTATATACCAAGAGCATAAGCCCATGTCTGAGATTACTGCTGGCTTACACCGTGGAATATATCATCAAGGAAAACTCCGGGTCAATCGTTTCAATCCTTACGAAGCTTATGTTGGAAGCGAGAGCATTGGTGAAGAGATAATTATCTATGGGCGCAGCAACATGAACAGGGCTTTTGATGGTGATATTGTTGCAGTCGAACTCTTGCCTCGGGATCAATGGCAAGATGAGAAGGCATTATCTATAGCTGAAGAAGATGATGAAGAGGATGATACTGTTCATTTGGCTCCCGACAATGTTGATGATGCTCCTAGAACCTCAAATTTATCCCATGAAACTTCTGGGGATAAAAATGCAGCCCCTGTTCGTCCATCAGGCCGTGTAGTCGGTGTTATCCGTAGAAATTGGCACTCCTATTGTGGATCTCTTGAACCGATGTCACTACCTGCTGGTAGTGGTGGAACGGCACATGCTTTATTTGTCTCTAAAGATCGCAGAATTCCCAAGATCCGCATTAATACTCGACAGCTGCAGAACCTTTTGGATATGAGGATAGTAGTGGCAGTTGATTCCTGGGACCGTCAATCTCGATATCCTTCTGGTCATTACGTACGACCAATCGGCAAAATAGGTGACAAGGAAACTGAAACAGAGGTTGTGTTGATAGAGAATGATGTTGACTACTCGCCGTTCTCTTCTCAAGTTCTGGCATGCTTGCCACCCTTACCTTGGTCTGTATCCTCTGAAGACGTATCCAATCCTGTTAGGCAAGACTTACGACATTTGCTTGTCTTTAGTGTGGACCCTCCGGGTTGCAAGGATATTGATGATGCATTGCACTGTACATCGCTTCCAAACGGGAACTTTGAACTTGGAGTCCACATTGCTGATGTAACGAATTTTGTTCACCCTGGTACTCCTTTGGATGATGAGGCATCAAAAAGAGGCACATCTGTCTACCTTGTTGAGCGCCGTATTGACATGCTTCCCAAACCTTTAACTGAAGATATTTGCTCTCTTAGAGCTGATGTGGAAAGGCTTGCATTCTCGGTTATTTGGGAAATGAGCCCTGACGCTGAGATTATCTCAACGAGATTCACAAAGAGTATTATCAAGTCTTCTGCAGCATTGTCCTATATTGAAGCTCAGGCTCGGATGGATGACAGCCGATTGACAGACTCCCTGACTACAGATCTGAGGAATATGAATACCTTGGCAAAGATAATGAGGCAAAGGCGTATCGATAGGGGAGCCTTAACTCTTGCTTCTGCGGAAGTCAAATTTGATATTGATCCGGAGAATCATGATCCTCTTAACATTGGTATGTATCAGATTCTCGAAGCAAACCAAATGGTTGAGGAATTCATGCTTGCTGCAAATGTTTCCGTCGCTGGACAGATCCTGAAACTATTCCCTTCTTGTTCACTATTAAGGCGTCATCCTACTCCAACAAGAGAAATGCTTGAACCACTACTGCGTACTGCTGCAGCTATTGGGCTTACCTTAGATGTCTCTTCATCTAAAGCTTTGGCTGATTCACTGGACCGAGCTGTGGGTGAGGATCCATATTTCAACAAGTTGATCAGGATATTGGCAACTAGGTGCATGACGCAGGCTGTGTACTTCTGTAGTGGGGATCTCAGTCCTCCCGAATATCATCATTATGGGCTTGCAGCACCCCTGTATACTCATTTTACATCCCCTATCCGTAGATATGCCGATGTCTTTGTGCACAGGTTACTTGCTGCGTCATTAGGAATATACAAGCTTCCAACGGTGTTCCAAGACAGACCTCAACTTACTAGTGTTGCTGATAATTTGAACTATCGACATAGGAATGCCCAGATGGCAGGTCGAGCTTCAGTAGAGCTGTACGTTCTCATTTACTTCAGAACCCGACCCACAGATGAAGAGGCGAGAGTTGTGAAGATAAGATCCAATGGTTTTATAGTATTTGTCCCCAAGTATGGAATCGAAGGCCCTGTTTATTTAACAGGAAAGGGAGAGAAAGGAGCTGGTGATTGGTATGTTGATGAGGAGAAGCAAAAGATTGTTAAGATGGATGGAAGTTTATCTTACAGTGTCTTGCAAACAGTGAAGATCCACATGGAGGTAGTAGAGCCTCAGCCTAACCGACCGAAACTCCAACTCACTCTCTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000175 GO:0000176 GO:0000178 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004527 GO:0004532 GO:0004540 GO:0005085 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006364 GO:0006396 GO:0006401 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008408 GO:0009056 GO:0009057 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0016075 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0019439 GO:0019899 GO:0022613 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046700 GO:0051020 GO:0065007 GO:0065009 GO:0070013 GO:0071034 GO:0071043 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0098772 GO:0140098 GO:1901360 GO:1901361 GO:1901575 GO:1902494 GO:1905354

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

PIN_4 RNB Rrp44_CSD1 Rrp44_S1

Protein Analysis

933

Amino Acids

105.0

Weight (kDa)

6.02

Isoelectric Point (pI)

45.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PIN_4	PF13638	97 - 220	3.1e-22	PIN domain
Rrp44_CSD1	PF17216	262 - 366	4.7e-12	Rrp44-like cold shock domain
OB_HELZ2	PF25049	278 - 334	1.4e-06	3'-5' exoribonuclease HELZ2, OB-fold domain
OB_Dis3	PF17849	416 - 477	1.4e-18	Dis3-like cold-shock domain 2 (CSD2)
RNB	PF00773	536 - 877	5.1e-94	RNB domain
Rrp44_S1	PF17215	928 - 998	2.8e-08	S1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0014218)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17510 AT2G17510
fragaria_vesca	FvH4_1g10170 FvH4_1g10170
malus_domestica	MD02G1113900.v1.1 MD15G1229000.v1.1
prunus_persica	Prupe.7G185100_v2.0.a1
pyrus_communis	pycom02g08870 pycom15g20420
rosa_chinensis	RchiOBHm_Chr2g0096961
rosa_laevigata	RLG00000016687
rosa_multiflora	Rmu_sc0001651.1_g000008
rosa_roxburghii	Rroxscaffold_2G00145120
rosa_rugosa	Rorug02G0062300
rosa_samantha	Rh2AG110300 Rh2BG112100
rosa_wichuraiana	Rw2G008530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1093, 2480
Acc65I	GGTACC	1 cut(s)	423
AccB1I	GGYRCC	1 cut(s)	423
AccI	GTMKAC	2 cut(s)	1596, 2324
AccII	CGCG	1 cut(s)	408
AccIII	TCCGGA	1 cut(s)	1933
AciI	CCGC	3 cut(s)	515, 1150, 1910
AcsI	RAATTY	5 cut(s)	961, 1137, 1537, 1919, 2000
AcuI	CTGAAG	7 cut(s)	108, 519, 909, 1404, 1662, 2484, 2512
AcyI	GRCGYC	1 cut(s)	2074
AfaI	GTAC	7 cut(s)	425, 1251, 1483, 1555, 2119, 2261, 2513
AfiI	CCNNNNNNNGG	4 cut(s)	1368, 2191, 2606, 2749
AgsI	TTSAA	8 cut(s)	22, 733, 1070, 1508, 1781, 2105, 2212, 2461
AhlI	ACTAGT	1 cut(s)	2441
AjnI	CCWGG	2 cut(s)	1211, 1549
AjuI	GAANNNNNNNTTGG	2 cut(s)	735, 767
AloI	GAACNNNNNNTCC	2 cut(s)	1500, 1532
Alw21I	GWGCWC	1 cut(s)	2373
Alw26I	GTCTC	4 cut(s)	304, 512, 1126, 2155
Alw44I	GTGCAC	1 cut(s)	2369
AlwNI	CAGNNNCTG	2 cut(s)	1001, 2041
Ama87I	CYCGRG	1 cut(s)	849
Aor13HI	TCCGGA	1 cut(s)	1933
AoxI	GGCC	3 cut(s)	492, 1015, 2617
ApaLI	GTGCAC	1 cut(s)	2369
ApoI	RAATTY	5 cut(s)	961, 1137, 1537, 1919, 2000
AseI	ATTAAT	1 cut(s)	1155
Asp700I	GAANNNNTTC	1 cut(s)	2048
Asp718I	GGTACC	1 cut(s)	423
AspLEI	GCGC	2 cut(s)	795, 1611
AspS9I	GGNCC	4 cut(s)	1216, 1441, 2182, 2618
AsuC2I	CCSGG	2 cut(s)	719, 1449
AsuHPI	GGTGA	7 cut(s)	173, 782, 833, 1283, 1538, 2207, 2669
AsuII	TTCGAA	1 cut(s)	629
AvaI	CYCGRG	1 cut(s)	849
AvaII	GGWCC	3 cut(s)	1216, 1441, 2182
BaeGI	GKGCMC	1 cut(s)	2373
BaeI	ACNNNNGTAYC	4 cut(s)	156, 189, 339, 372
BamHI	GGATCC	1 cut(s)	2200
BanI	GGYRCC	1 cut(s)	423
BanII	GRGCYC	1 cut(s)	1709
BbsI	GAAGAC	4 cut(s)	132, 597, 1392, 1749
Bbv12I	GWGCWC	1 cut(s)	2373
BbvCI	CCTCAGC	1 cut(s)	2763
BccI	CCATC	6 cut(s)	812, 1018, 1789, 2479, 2692, 2696
BceAI	ACGGC	4 cut(s)	1002, 1119, 1312, 1596
BciT130I	CCWGG	2 cut(s)	1213, 1551
BciVI	GTATCC	4 cut(s)	340, 436, 1387, 1402
BclI	TGATCA	1 cut(s)	2220
BcnI	CCSGG	2 cut(s)	719, 1449
BcoDI	GTCTC	4 cut(s)	304, 512, 1126, 2155
BcuI	ACTAGT	1 cut(s)	2441
BfaI	CTAG	5 cut(s)	437, 621, 951, 2238, 2442
BfmI	CTRYAG	8 cut(s)	210, 295, 882, 1169, 1761, 1827, 2124, 2266
BfoI	RGCGCY	1 cut(s)	1612
BfuAI	ACCTGC	2 cut(s)	1093, 2480
BfuI	GTATCC	4 cut(s)	340, 436, 1387, 1402
BglI	GCCNNNNNGGC	1 cut(s)	2486
BglII	AGATCT	1 cut(s)	1831
Bme1390I	CCNGG	4 cut(s)	719, 1213, 1449, 1551
Bme18I	GGWCC	3 cut(s)	1216, 1441, 2182
BmeT110I	CYCGRG	1 cut(s)	849
BmgT120I	GGNCC	4 cut(s)	1216, 1441, 2182, 2618
BmiI	GGNNCC	6 cut(s)	425, 927, 1217, 1443, 1891, 2202
BmrFI	CCNGG	4 cut(s)	719, 1213, 1449, 1551
BmsI	GCATC	5 cut(s)	442, 598, 934, 1459, 1583
BpiI	GAAGAC	4 cut(s)	132, 597, 1392, 1749
BplI	GAGNNNNNCTC	2 cut(s)	1709, 1741
Bpu10I	CCTNAGC	2 cut(s)	1785, 2763
Bpu14I	TTCGAA	1 cut(s)	629
BpuEI	CTTGAG	1 cut(s)	1323
BpuMI	CCSGG	2 cut(s)	719, 1449
Bsa29I	ATCGAT	1 cut(s)	1881
BsaAI	YACGTR	1 cut(s)	1249
BsaBI	GATNNNNATC	2 cut(s)	782, 1929
BsaHI	GRCGYC	1 cut(s)	2074
BsaJI	CCNNGG	7 cut(s)	363, 691, 848, 1212, 1367, 1549, 1851
BsaWI	WCCGGW	1 cut(s)	1933
BsaXI	ACNNNNNCTCC	2 cut(s)	2766, 2796
Bsc4I	CCNNNNNNNGG	4 cut(s)	1368, 2191, 2606, 2749
Bse1I	ACTGG	1 cut(s)	2184
Bse3DI	GCAATG	2 cut(s)	1472, 1521
Bse8I	GATNNNNATC	2 cut(s)	782, 1929
BseAI	TCCGGA	1 cut(s)	1933
BseBI	CCWGG	2 cut(s)	1213, 1551
BseCI	ATCGAT	1 cut(s)	1881
BseDI	CCNNGG	7 cut(s)	363, 691, 848, 1212, 1367, 1549, 1851
BseGI	GGATG	7 cut(s)	913, 1570, 1800, 1804, 2077, 2336, 2707
BseJI	GATNNNNATC	2 cut(s)	782, 1929
BseLI	CCNNNNNNNGG	4 cut(s)	1368, 2191, 2606, 2749
BseMI	GCAATG	2 cut(s)	1472, 1521
BseMII	CTCAG	7 cut(s)	464, 660, 1707, 1799, 1826, 2293, 2777
BseNI	ACTGG	1 cut(s)	2184
BseRI	GAGGAG	2 cut(s)	51, 2690
BseSI	GKGCMC	1 cut(s)	2373
Bsh1236I	CGCG	1 cut(s)	408
Bsh1285I	CGRYCG	1 cut(s)	2777
BshFI	GGCC	3 cut(s)	494, 1017, 2619
BshNI	GGYRCC	1 cut(s)	423
BshVI	ATCGAT	1 cut(s)	1881
BsiEI	CGRYCG	1 cut(s)	2777
BsiHKAI	GWGCWC	1 cut(s)	2373
BsiHKCI	CYCGRG	1 cut(s)	849
BsiSI	CCGG	3 cut(s)	718, 1448, 1934
BsiWI	CGTACG	1 cut(s)	1249
BslFI	GGGAC	2 cut(s)	1229, 2582
BslI	CCNNNNNNNGG	4 cut(s)	1368, 2191, 2606, 2749
BsmAI	GTCTC	4 cut(s)	304, 512, 1126, 2155
BsmFI	GGGAC	2 cut(s)	1229, 2582
BsmI	GAATGC	2 cut(s)	1682, 2482
BsnI	GGCC	3 cut(s)	494, 1017, 2619
BsoBI	CYCGRG	1 cut(s)	849
Bsp119I	TTCGAA	1 cut(s)	629
Bsp1286I	GDGCHC	2 cut(s)	1709, 2373
Bsp13I	TCCGGA	1 cut(s)	1933
Bsp1407I	TGTACA	1 cut(s)	1481
Bsp19I	CCATGG	1 cut(s)	363
BspACI	CCGC	3 cut(s)	515, 1150, 1910
BspANI	GGCC	3 cut(s)	494, 1017, 2619
BspCNI	CTCAG	7 cut(s)	463, 661, 1708, 1798, 1827, 2292, 2776
BspDI	ATCGAT	1 cut(s)	1881
BspEI	TCCGGA	1 cut(s)	1933
BspFNI	CGCG	1 cut(s)	408
BspHI	TCATGA	1 cut(s)	1942
BspLI	GGNNCC	6 cut(s)	425, 927, 1217, 1443, 1891, 2202
BspMAI	CTGCAG	4 cut(s)	299, 1173, 1765, 2128
BspMI	ACCTGC	2 cut(s)	1093, 2480
BspT104I	TTCGAA	1 cut(s)	629
BspT107I	GGYRCC	1 cut(s)	423
BsrDI	GCAATG	2 cut(s)	1472, 1521
BsrGI	TGTACA	1 cut(s)	1481
BsrI	ACTGG	1 cut(s)	2184
BssECI	CCNNGG	7 cut(s)	363, 691, 848, 1212, 1367, 1549, 1851
BssNAI	GTATAC	1 cut(s)	2325
BssNI	GRCGYC	1 cut(s)	2074
BssT1I	CCWWGG	3 cut(s)	363, 1367, 1851
Bst1107I	GTATAC	1 cut(s)	2325
Bst2UI	CCWGG	2 cut(s)	1213, 1551
Bst4CI	ACNGT	9 cut(s)	92, 220, 692, 916, 1220, 1481, 2416, 2720, 2734
Bst6I	CTCTTC	7 cut(s)	495, 626, 768, 897, 1339, 2158, 2544
BstACI	GRCGYC	1 cut(s)	2074
BstAUI	TGTACA	1 cut(s)	1481
BstBAI	YACGTR	1 cut(s)	1249
BstBI	TTCGAA	1 cut(s)	629
BstC8I	GCNNGC	9 cut(s)	360, 573, 682, 1351, 1355, 1680, 2010, 2253, 2310
BstDSI	CCRYGG	2 cut(s)	363, 691
BstF5I	GGATG	7 cut(s)	913, 1570, 1800, 1804, 2077, 2336, 2707
BstFNI	CGCG	1 cut(s)	408
BstH2I	RGCGCY	1 cut(s)	1612
BstHHI	GCGC	2 cut(s)	795, 1611
BstMAI	GTCTC	4 cut(s)	304, 512, 1126, 2155
BstMCI	CGRYCG	1 cut(s)	2777
BstMWI	GCNNNNNNNGC	3 cut(s)	568, 2486, 2495
BstNI	CCWGG	2 cut(s)	1213, 1551
BstNSI	RCATGY	3 cut(s)	1112, 1353, 1624
BstSCI	CCNGG	4 cut(s)	717, 1211, 1447, 1549
BstSFI	CTRYAG	8 cut(s)	210, 295, 882, 1169, 1761, 1827, 2124, 2266
BstSLI	GKGCMC	1 cut(s)	2373
BstSNI	TACGTA	1 cut(s)	1249
BstUI	CGCG	1 cut(s)	408
BstV2I	GAAGAC	4 cut(s)	132, 597, 1392, 1749
BstX2I	RGATCY	9 cut(s)	565, 1061, 1146, 1831, 2037, 2200, 2275, 2573, 2739
BstYI	RGATCY	9 cut(s)	565, 1061, 1146, 1831, 2037, 2200, 2275, 2573, 2739
BstZ17I	GTATAC	1 cut(s)	2325
Bsu15I	ATCGAT	1 cut(s)	1881
BsuI	GTATCC	4 cut(s)	340, 436, 1387, 1402
BsuRI	GGCC	3 cut(s)	494, 1017, 2619
BsuTUI	ATCGAT	1 cut(s)	1881
BtgI	CCRYGG	2 cut(s)	363, 691
BtgZI	GCGATG	1 cut(s)	1470
BtsCI	GGATG	7 cut(s)	913, 1570, 1800, 1804, 2077, 2336, 2707
BtsIMutI	CAGTG	6 cut(s)	216, 495, 1477, 2177, 2725, 2739
BveI	ACCTGC	2 cut(s)	1093, 2480
Cac8I	GCNNGC	9 cut(s)	360, 573, 682, 1351, 1355, 1680, 2010, 2253, 2310
CaiI	CAGNNNCTG	2 cut(s)	1001, 2041
CciI	TCATGA	1 cut(s)	1942
CfoI	GCGC	2 cut(s)	795, 1611
Cfr13I	GGNCC	4 cut(s)	1216, 1441, 2182, 2618
ClaI	ATCGAT	1 cut(s)	1881
CseI	GACGC	5 cut(s)	397, 1721, 2063, 2257, 2376
Csp6I	GTAC	7 cut(s)	424, 1250, 1482, 1554, 2118, 2260, 2512
CviQI	GTAC	7 cut(s)	424, 1250, 1482, 1554, 2118, 2260, 2512
Eam1104I	CTCTTC	7 cut(s)	495, 626, 768, 897, 1339, 2158, 2544
EarI	CTCTTC	7 cut(s)	495, 626, 768, 897, 1339, 2158, 2544
Eco105I	TACGTA	1 cut(s)	1249
Eco130I	CCWWGG	3 cut(s)	363, 1367, 1851
Eco24I	GRGCYC	1 cut(s)	1709
Eco32I	GATATC	1 cut(s)	1232
Eco47I	GGWCC	3 cut(s)	1216, 1441, 2182
Eco57I	CTGAAG	7 cut(s)	108, 519, 909, 1404, 1662, 2484, 2512
Eco88I	CYCGRG	1 cut(s)	849
EcoO109I	RGGNCCY	1 cut(s)	2618
EcoRI	GAATTC	2 cut(s)	1137, 2000
EcoRII	CCWGG	2 cut(s)	1211, 1549
EcoRV	GATATC	1 cut(s)	1232
EcoT14I	CCWWGG	3 cut(s)	363, 1367, 1851
EcoT22I	ATGCAT	1 cut(s)	1474
EcoT38I	GRGCYC	1 cut(s)	1709
ErhI	CCWWGG	3 cut(s)	363, 1367, 1851
FalI	AAGNNNNNCTT	2 cut(s)	2698, 2730
FaqI	GGGAC	2 cut(s)	1229, 2582
FbaI	TGATCA	1 cut(s)	2220
FblI	GTMKAC	2 cut(s)	1596, 2324
FokI	GGATG	7 cut(s)	920, 1577, 1807, 1811, 2064, 2323, 2714
FriOI	GRGCYC	1 cut(s)	1709
FspBI	CTAG	5 cut(s)	437, 621, 951, 2238, 2442
GlaI	GCGC	2 cut(s)	794, 1610
HaeII	RGCGCY	1 cut(s)	1612
HaeIII	GGCC	3 cut(s)	494, 1017, 2619
HapII	CCGG	3 cut(s)	718, 1448, 1934
HgaI	GACGC	5 cut(s)	397, 1721, 2063, 2257, 2376
HhaI	GCGC	2 cut(s)	795, 1611
Hin1I	GRCGYC	1 cut(s)	2074
Hin6I	GCGC	2 cut(s)	793, 1609
HinP1I	GCGC	2 cut(s)	793, 1609
HincII	GTYRAC	1 cut(s)	1318
HindII	GTYRAC	1 cut(s)	1318
HindIII	AAGCTT	3 cut(s)	744, 2163, 2405
HpaII	CCGG	3 cut(s)	718, 1448, 1934
HphI	GGTGA	7 cut(s)	173, 782, 833, 1283, 1538, 2207, 2669
Hpy188I	TCNGA	7 cut(s)	287, 670, 1384, 1794, 1836, 1971, 2531
Hpy99I	CGWCG	3 cut(s)	176, 413, 2030
HpyAV	CCTTC	6 cut(s)	484, 636, 865, 1245, 2064, 2609
HpyCH4III	ACNGT	9 cut(s)	92, 220, 692, 916, 1220, 1481, 2416, 2720, 2734
HpyCH4IV	ACGT	4 cut(s)	171, 1248, 1389, 2514
HpyF10VI	GCNNNNNNNGC	3 cut(s)	568, 2486, 2495
HpySE526I	ACGT	4 cut(s)	171, 1248, 1389, 2514
Hsp92I	GRCGYC	1 cut(s)	2074
HspAI	GCGC	2 cut(s)	793, 1609
Kpn2I	TCCGGA	1 cut(s)	1933
KpnI	GGTACC	1 cut(s)	427
Ksp22I	TGATCA	1 cut(s)	2220
LmnI	GCTCC	5 cut(s)	95, 931, 952, 1889, 2651
LweI	GCATC	5 cut(s)	442, 598, 934, 1459, 1583
MaeI	CTAG	5 cut(s)	437, 621, 951, 2238, 2442
MaeII	ACGT	4 cut(s)	171, 1248, 1389, 2514
MaeIII	GTNAC	5 cut(s)	463, 1077, 1271, 1531, 2376
MfeI	CAATTG	1 cut(s)	522
MflI	RGATCY	9 cut(s)	565, 1061, 1146, 1831, 2037, 2200, 2275, 2573, 2739
MhlI	GDGCHC	2 cut(s)	1709, 2373
MlyI	GAGTC	2 cut(s)	1524, 1811
MmeI	TCCRAC	5 cut(s)	177, 222, 733, 2111, 2435
Mph1103I	ATGCAT	1 cut(s)	1474
MroI	TCCGGA	1 cut(s)	1933
MroXI	GAANNNNTTC	1 cut(s)	2048
MseI	TTAA	9 cut(s)	252, 537, 1155, 1637, 1895, 1953, 2069, 2630, 2694
MslI	CAYNNNNRTG	4 cut(s)	599, 1961, 2301, 2475
MspA1I	CMGCKG	2 cut(s)	128, 1168
MspI	CCGG	3 cut(s)	718, 1448, 1934
MspR9I	CCNGG	4 cut(s)	719, 1213, 1449, 1551
MunI	CAATTG	1 cut(s)	522
Mva1269I	GAATGC	2 cut(s)	1682, 2482
MvaI	CCWGG	2 cut(s)	1213, 1551
MvnI	CGCG	1 cut(s)	408
MwoI	GCNNNNNNNGC	3 cut(s)	568, 2486, 2495
NciI	CCSGG	2 cut(s)	719, 1449
NcoI	CCATGG	1 cut(s)	363
NlaIV	GGNNCC	6 cut(s)	425, 927, 1217, 1443, 1891, 2202
NmuCI	GTSAC	2 cut(s)	1077, 1271
NsiI	ATGCAT	1 cut(s)	1474
NspI	RCATGY	3 cut(s)	1112, 1353, 1624
NspV	TTCGAA	1 cut(s)	629
PaeI	GCATGC	1 cut(s)	1353
PagI	TCATGA	1 cut(s)	1942
PctI	GAATGC	2 cut(s)	1682, 2482
PdmI	GAANNNNTTC	1 cut(s)	2048
Pfl23II	CGTACG	1 cut(s)	1249
PleI	GAGTC	2 cut(s)	1523, 1811
PpsI	GAGTC	2 cut(s)	1523, 1811
Ppu21I	YACGTR	1 cut(s)	1249
PshBI	ATTAAT	1 cut(s)	1155
Psp6I	CCWGG	2 cut(s)	1211, 1549
PspGI	CCWGG	2 cut(s)	1211, 1549
PspLI	CGTACG	1 cut(s)	1249
PspN4I	GGNNCC	6 cut(s)	425, 927, 1217, 1443, 1891, 2202
PspPI	GGNCC	4 cut(s)	1216, 1441, 2182, 2618
PstI	CTGCAG	4 cut(s)	299, 1173, 1765, 2128
PstNI	CAGNNNCTG	2 cut(s)	1001, 2041
PsuI	RGATCY	9 cut(s)	565, 1061, 1146, 1831, 2037, 2200, 2275, 2573, 2739
PvuII	CAGCTG	2 cut(s)	128, 1168
RsaI	GTAC	7 cut(s)	425, 1251, 1483, 1555, 2119, 2261, 2513
RsaNI	GTAC	7 cut(s)	424, 1250, 1482, 1554, 2118, 2260, 2512
RseI	CAYNNNNRTG	4 cut(s)	599, 1961, 2301, 2475
SaqAI	TTAA	9 cut(s)	252, 537, 1155, 1637, 1895, 1953, 2069, 2630, 2694
Sau96I	GGNCC	4 cut(s)	1216, 1441, 2182, 2618
SchI	GAGTC	2 cut(s)	1524, 1811
ScrFI	CCNGG	4 cut(s)	719, 1213, 1449, 1551
SduI	GDGCHC	2 cut(s)	1709, 2373
SfaNI	GCATC	5 cut(s)	442, 598, 934, 1459, 1583
SfcI	CTRYAG	8 cut(s)	210, 295, 882, 1169, 1761, 1827, 2124, 2266
SfuI	TTCGAA	1 cut(s)	629
SinI	GGWCC	3 cut(s)	1216, 1441, 2182
SmiMI	CAYNNNNRTG	4 cut(s)	599, 1961, 2301, 2475
SmlI	CTYRAG	1 cut(s)	1338
SmoI	CTYRAG	1 cut(s)	1338
SnaBI	TACGTA	1 cut(s)	1249
SpeI	ACTAGT	1 cut(s)	2441
SphI	GCATGC	1 cut(s)	1353
SsiI	CCGC	3 cut(s)	515, 1150, 1910
SspMI	CTAG	5 cut(s)	437, 621, 951, 2238, 2442
StyD4I	CCNGG	4 cut(s)	717, 1211, 1447, 1549
StyI	CCWWGG	3 cut(s)	363, 1367, 1851
TaaI	ACNGT	9 cut(s)	92, 220, 692, 916, 1220, 1481, 2416, 2720, 2734
TaiI	ACGT	4 cut(s)	174, 1251, 1392, 2517
TaqI	TCGA	9 cut(s)	629, 837, 1162, 1228, 1881, 1977, 2467, 2494, 2613
TaqII	GACCGA	2 cut(s)	2199, 2791
TatI	WGTACW	2 cut(s)	1481, 2259
Tru1I	TTAA	9 cut(s)	252, 537, 1155, 1637, 1895, 1953, 2069, 2630, 2694
Tru9I	TTAA	9 cut(s)	252, 537, 1155, 1637, 1895, 1953, 2069, 2630, 2694
TscAI	CASTG	6 cut(s)	223, 502, 1484, 2184, 2725, 2739
TseFI	GTSAC	2 cut(s)	1077, 1271
Tsp45I	GTSAC	2 cut(s)	1077, 1271
TspDTI	ATGAA	9 cut(s)	603, 818, 908, 915, 987, 1859, 1993, 2145, 2562
TspGWI	ACGGA	4 cut(s)	502, 1025, 2014, 2336
TspRI	CASTG	6 cut(s)	223, 502, 1484, 2184, 2725, 2739
VneI	GTGCAC	1 cut(s)	2369
VpaK11BI	GGWCC	3 cut(s)	1216, 1441, 2182
VspI	ATTAAT	1 cut(s)	1155
XapI	RAATTY	5 cut(s)	961, 1137, 1537, 1919, 2000
XbaI	TCTAGA	1 cut(s)	620
XceI	RCATGY	3 cut(s)	1112, 1353, 1624
XcmI	CCANNNNNNNNNTGG	2 cut(s)	977, 1365
XmiI	GTMKAC	2 cut(s)	1596, 2324
XmnI	GAANNNNTTC	1 cut(s)	2048
XspI	CTAG	5 cut(s)	437, 621, 951, 2238, 2442
Zsp2I	ATGCAT	1 cut(s)	1474

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.