AT2G19120

helicase MAGATAMA 3

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
8286625 .. 8292498
5874 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G19120.1

Sequence Viewer

Length: 3273 bp
ATGGATTCTGATGCTAGTGCCAAGGAGAATACACAAGATCTTTCTGACTACAAGGGAATGATAGAAACTGGTGGTGAAGGCAGTGTTAGAGATGAGCTACAAGAACCAGGTTTGATGGTGAAGCAGAGAGAAGTTAAAGGAGTTGAAGCAAGTTATGCAGTTAAATGTGCTAATACTACAGTGAAGAGAAAGATGGATCAACATAAAGAGGCAATGTTGGGAAAGAAACGAAATAGGCAGACTAGGTTTCTTAATTTGGAAGATGTTAAGCAAGCAGGTACTGTTAATACATCTACACCTAGGAGACAGAACTTTGCACAGGCTGTCCCTACACGCTCCAGTGCAGTTAATCCACCTGCTGAGCATGGAGGAGAAAGCCAAAGCCAAAGCCATCAAAATCTAAAATCAGTTGATTTTCCTTCTACTGGCGGTATACATTCAGAATCTGCTGAACAGAAGACCGAAAGTAATGGGGAATCATATTCAGGTTTACTTGGTAAACCTAGGAGGCTCAACAGGGATGAAGAACCTTCTGCTGAAGGGATGGGAACATCTGTATCAAGGCAGGCTTCTTGGAAGCAGCCGGCTAATATACGGCAGCCCAAGAGCGGTCATTCATCTAGTAGAAAAGTATCTTACAGCCAAAGATCTTTCAAGAAGCCAGCCACAAGTAGTACCCAATATCAGGATACATCTGTGGAACGTCTTATTCGAGAGGTGACCAACGAAAAGTTCTGGCGTCATCCTGAGGATACCGAACTCCGAAGTGTACCTGAGCGGTTTGAATCTATGGAGGAATATGTCAGAGTTTTTGAACCCTTACTTTTTGAGGAATGCCGGGCACAACTTTACAGTACATGGGTTGAACTGGCTGAGGCTAATACATATGTGAAAGTTCGAATAAAATCCATCGAAAGAAGAGAGAGAGGATGGTATGATGTAATACTTAACTCCTTAAATGGCTGTAAATGGGCTTTCAAGGAGGGAGATGTTGCAGTTCTTTCAACTCCACTGCCTGAATCAGATGAAGACCATGAGGATGCTGGACGTGTCGCTGGTACAGTTAGGAGACATATACCAGTTGATACCCGTGACCCTCGTGGAGCTACTCTACATTTCTATGTTGGAAATTCTGGTGGCACTGGCAGCAAGATTGATGATAGTCATATTTTACGGAAGCTTAAACCTCAGGATATCTGGCATCTAACAGTGCTTGGTTCACTTGCAACCACACAGAGGGAATATGTTGCACTTCATGCGTTTTCTCGACTTAACCCACAGATGCAAAATGCCATTCTCAACCCCAGTCCGGAGCAGTTTCCTAGTTACGAGGAGCAAACCCCTGCAACGCCTGATTGTTTCACTACTAGCTTTGTTGACCATTTACATAGAAGCTTTAATGCTCCGCAGCTGGCTGCAATCCACTGGGCGGCCATGCATACTGCAGCTGGTACTAGTAGTGGGGTGAAGAAGCAAGAACCATGGCCATTCACTCTTGTTCAGGGTCCGCCAGGAACAGGCAAGACACACACTGTTTGGGGAATGTTGAATGTTATCCATTTGGTTCAGTATCAACAATATTACACTTCGTTGCTGAAGAAATTAGCACCTGAAACCTATAATCAAGCTAATGAGTGCAGCAGTTCAGATAATATTTTGTCAGGCTCTATTGATGAAGTCCTACAAAACATGGACCACAATCTCTTCCGCACCCTGCCCAAACTCTGTGCTAAACCAAGGATGCTTGTTTGTGCTCCTTCGAATGCTGCAACTGATGAACTTCTTTCACGTGTCCTCGACCGTGGTTTTATTGATGGGGAGATGAGGGTATATCGTCCCGATGTTGCTCGAGTCGGTGTTGATTCTCAATCGCGAGCTGCTCAAGCAGTTTCTGTGGAGCGAAGAAGTGATCAGCTATTAGCTATATCCCGCGACGAGATTCTACGACACATGCGTAACCTCAGACTACAAGAAACACAGATTTCTCAAAATATAGCTGGACTTAAAAGGGAACTTAATGCTGCAGCTTTTGCTACACGTTCTCAGGGATCTGTTGGAGTTGATCCTGAAGTCCTTATTTCAAGAGACCAGAAAAGAGATGCATTGTTACAGCACCTTGCTGCGGTGGTTGAAGCCAGAGATAAAGTACTTGTTGAAATATCTCGCCTTCTTATTGTGGAGGGAAAGTTTCGTGCTGGTAACAATTTTAATCTTGAGGAAGCACGAGCGAGTCTTGAGGCAAGTTTTGCAAATGAGGCTGAAATTGTTTTTACCACTGTATCAAGCAGTGGTCGTAAACTGTTTTCTCGTCTTACCCATGGCTTCGATATGGTTGTCATTGACGAGGCTGCCCAAGCTAGTGAGGTTGGAGTTCTTCCTCCCCTTGCTCTTGGTGCTGCGCGATGTGTACTTGTCGGTGATCCTCAGCAGCTTCCTGCGACAGTGATTAGCAAGGCTGCTGGAACTCTTTTATATAGTAGAAGTCTCTTTGAAAGGTTTCAGCTAGCAGGCTGTCCGACTTTGTTATTGACTGTTCAATACAGAATGCATCCTCAAATTCGAGATTTTCCTTCAAGGTACTTCTACCAAGGACGCCTCAAAGACAGTGAAAGTATATCCAGCGCTCCTGATGAGATTTACTATAAAGATCCTGTTCTTAGGCCTTACCTTTTCTTCAATATCAGCCATGGGCGGGAGTCTCATAGAGGTGGATCTGTATCTTACGAGAATGTTGATGAAGCTCGATTCTGTGTTGGGGTGTACATGCATCTTCAGAAAACTCTGAAGTCGTTGGGTGCGGGTAAAGTCTCTGTGGGAGTAATAACCCCGTACAAACTGCAGCTGAAATGCCTTAAGCACGAGTTTGGCAATGCTTTGGGCCAAGATGAACTGAAAGAGATTTATATTAATACAGTAGACGCGTTTCAGGGTCAAGAACGTGATGTTATAATCATGTCATGTGTGCGTGCTTCGGGTCATGGGGTTGGCTTTGTTTCAGATATCCGGCGGATGAATGTTGCTCTTACCCGTGCGAGAAGAGCTCTGTGGGTGATGGGAAATGCATCTGCTCTGATGAAGTCTGAGGATTGGGCAGCGTTGATCTCTGACGCGAGAGGCAGAAACTGTTTTATGGAAATGGACTCTCTTCCCCTGGATTTCCCAATCCCTAAAGTATCTAGTTATAATCCCATGGCACCTAATAATGGGTTAATAACATCGAAGCTGTACCCTTCAGACGCACCGATCATAGGCCTGCACACCAAATTACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1090

Amino Acids

121.52

Weight (kDa)

8.35

Isoelectric Point (pI)

46.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_11 PF13086 466 - 818 2e-59 AAA domain
AAA_12 PF13087 825 - 1021 1.2e-59 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2948, 3183
AarI CACCTGC 1 cut(s) 364
Acc36I ACCTGC 2 cut(s) 266, 364
AccB1I GGYRCC 1 cut(s) 3193
AccBSI CCGCTC 2 cut(s) 609, 778
AccI GTMKAC 2 cut(s) 433, 2916
AccII CGCG 5 cut(s) 1873, 1932, 2401, 2921, 3110
AccIII TCCGGA 1 cut(s) 1309
AclWI GGATC 6 cut(s) 204, 2056, 2057, 2414, 2642, 2719
AcoI YGGCCR 2 cut(s) 1431, 1484
AcsI RAATTY 2 cut(s) 1129, 2556
AcuI CTGAAG 6 cut(s) 558, 1616, 2088, 2756, 2804, 3216
AcvI CACGTG 1 cut(s) 1790
AcyI GRCGYC 2 cut(s) 739, 2593
AfeI AGCGCT 1 cut(s) 2623
AflII CTTAAG 1 cut(s) 2852
AflIII ACRYGT 4 cut(s) 1048, 1789, 2036, 2919
AhlI ACTAGT 1 cut(s) 1454
AjiI CACGTC 1 cut(s) 1049
AjnI CCWGG 3 cut(s) 106, 1510, 3150
AjuI GAANNNNNNNTTGG 2 cut(s) 716, 748
Alw21I GWGCWC 2 cut(s) 1756, 3043
Alw26I GTCTC 6 cut(s) 298, 1063, 2079, 2489, 2703, 2812
AlwI GGATC 6 cut(s) 204, 2056, 2057, 2414, 2642, 2719
AlwNI CAGNNNCTG 4 cut(s) 281, 446, 1892, 3123
Ama87I CYCGRG 1 cut(s) 1848
Aor13HI TCCGGA 1 cut(s) 1309
Aor51HI AGCGCT 1 cut(s) 2623
AoxI GGCC 5 cut(s) 1431, 1484, 2660, 2878, 3250
ApoI RAATTY 2 cut(s) 1129, 2556
AseI ATTAAT 1 cut(s) 2907
Asp700I GAANNNNTTC 1 cut(s) 2496
AspA2I CCTAGG 2 cut(s) 299, 503
AspLEI GCGC 2 cut(s) 2401, 2624
AspS9I GGNCC 3 cut(s) 1505, 1693, 2878
AsuC2I CCSGG 1 cut(s) 839
AsuHPI GGTGA 6 cut(s) 86, 130, 730, 1477, 2429, 3061
AsuII TTCGAA 2 cut(s) 898, 1760
AsuNHI GCTAGC 1 cut(s) 2503
AvaI CYCGRG 1 cut(s) 1848
AvaII GGWCC 2 cut(s) 1505, 1693
AvrII CCTAGG 2 cut(s) 299, 503
AxyI CCTNAGG 2 cut(s) 747, 1188
BaeGI GKGCMC 1 cut(s) 844
BaeI ACNNNNGTAYC 6 cut(s) 540, 573, 681, 714, 2262, 2295
BalI TGGCCA 1 cut(s) 1486
BanI GGYRCC 1 cut(s) 3193
BanII GRGCYC 1 cut(s) 3043
BauI CACGAG 3 cut(s) 1098, 2223, 2858
BbrPI CACGTG 1 cut(s) 1790
BbsI GAAGAC 2 cut(s) 464, 1035
Bbv12I GWGCWC 2 cut(s) 1756, 3043
BbvCI CCTCAGC 2 cut(s) 873, 2424
BccI CCATC 8 cut(s) 109, 187, 399, 538, 917, 924, 1808, 3046
BceAI ACGGC 1 cut(s) 611
BciT130I CCWGG 3 cut(s) 108, 1512, 3152
BciVI GTATCC 2 cut(s) 682, 745
BclI TGATCA 1 cut(s) 1909
BcnI CCSGG 1 cut(s) 839
BcoDI GTCTC 6 cut(s) 298, 1063, 2079, 2489, 2703, 2812
BcuI ACTAGT 1 cut(s) 1454
BfmI CTRYAG 4 cut(s) 177, 1443, 2022, 2837
BfoI RGCGCY 1 cut(s) 2625
BfrI CTTAAG 1 cut(s) 2852
BfuAI ACCTGC 2 cut(s) 266, 364
BfuI GTATCC 2 cut(s) 682, 745
BglII AGATCT 2 cut(s) 37, 647
BlnI CCTAGG 2 cut(s) 299, 503
BlpI GCTNAGC 1 cut(s) 360
BmcAI AGTACT 1 cut(s) 2148
Bme1390I CCNGG 4 cut(s) 108, 839, 1512, 3152
Bme18I GGWCC 2 cut(s) 1505, 1693
BmeT110I CYCGRG 1 cut(s) 1848
BmgBI CACGTC 1 cut(s) 1049
BmgT120I GGNCC 3 cut(s) 1505, 1693, 2878
BmiI GGNNCC 2 cut(s) 1506, 3195
BmrFI CCNGG 4 cut(s) 108, 839, 1512, 3152
BmrI ACTGGG 2 cut(s) 1299, 1435
BmsI GCATC 8 cut(s) 1030, 1210, 1272, 1731, 2089, 2557, 2776, 3071
BmtI GCTAGC 1 cut(s) 2507
BmuI ACTGGG 2 cut(s) 1299, 1435
BpiI GAAGAC 2 cut(s) 464, 1035
BplI GAGNNNNNCTC 2 cut(s) 3025, 3057
BpmI CTGGAG 1 cut(s) 322
Bpu10I CCTNAGC 3 cut(s) 774, 873, 2424
Bpu1102I GCTNAGC 1 cut(s) 360
Bpu14I TTCGAA 2 cut(s) 898, 1760
BpuEI CTTGAG 3 cut(s) 1866, 2234, 2255
BpuMI CCSGG 1 cut(s) 839
BsaAI YACGTR 1 cut(s) 1790
BsaBI GATNNNNATC 1 cut(s) 2716
BsaHI GRCGYC 2 cut(s) 739, 2593
BsaI GGTCTC 1 cut(s) 2079
BsaWI WCCGGW 1 cut(s) 1309
BsaXI ACNNNNNCTCC 2 cut(s) 2171, 2201
Bse118I RCCGGY 1 cut(s) 583
Bse1I ACTGG 8 cut(s) 73, 339, 430, 873, 1079, 1147, 1305, 1430
Bse21I CCTNAGG 2 cut(s) 747, 1188
Bse3DI GCAATG 2 cut(s) 219, 2875
Bse8I GATNNNNATC 1 cut(s) 2716
BseAI TCCGGA 1 cut(s) 1309
BseBI CCWGG 3 cut(s) 108, 1512, 3152
BseGI GGATG 8 cut(s) 526, 549, 742, 935, 1045, 1746, 2548, 3015
BseJI GATNNNNATC 1 cut(s) 2716
BseMI GCAATG 2 cut(s) 219, 2875
BseMII CTCAG 9 cut(s) 351, 738, 765, 864, 1202, 1975, 2057, 2438, 3072
BseNI ACTGG 8 cut(s) 73, 339, 430, 873, 1079, 1147, 1305, 1430
BseRI GAGGAG 2 cut(s) 384, 1346
BseSI GKGCMC 1 cut(s) 844
BsgI GTGCAG 3 cut(s) 363, 1657, 3239
Bsh1236I CGCG 5 cut(s) 1873, 1932, 2401, 2921, 3110
Bsh1285I CGRYCG 1 cut(s) 1801
BshFI GGCC 5 cut(s) 1433, 1486, 2662, 2880, 3252
BshNI GGYRCC 1 cut(s) 3193
BsiEI CGRYCG 1 cut(s) 1801
BsiHKAI GWGCWC 2 cut(s) 1756, 3043
BsiHKCI CYCGRG 1 cut(s) 1848
BsiSI CCGG 4 cut(s) 584, 838, 1310, 3004
BslFI GGGAC 2 cut(s) 311, 1821
BsmAI GTCTC 6 cut(s) 298, 1063, 2079, 2489, 2703, 2812
BsmFI GGGAC 2 cut(s) 311, 1821
BsmI GAATGC 3 cut(s) 839, 1768, 2550
BsnI GGCC 5 cut(s) 1433, 1486, 2662, 2880, 3252
Bso31I GGTCTC 1 cut(s) 2079
BsoBI CYCGRG 1 cut(s) 1848
Bsp119I TTCGAA 2 cut(s) 898, 1760
Bsp1286I GDGCHC 3 cut(s) 844, 1756, 3043
Bsp13I TCCGGA 1 cut(s) 1309
Bsp1407I TGTACA 1 cut(s) 2760
Bsp1720I GCTNAGC 1 cut(s) 360
Bsp19I CCATGG 4 cut(s) 1481, 2317, 2686, 3189
Bsp68I TCGCGA 1 cut(s) 1873
BspANI GGCC 5 cut(s) 1433, 1486, 2662, 2880, 3252
BspCNI CTCAG 9 cut(s) 352, 739, 766, 865, 1201, 1974, 2056, 2437, 3073
BspEI TCCGGA 1 cut(s) 1309
BspFNI CGCG 5 cut(s) 1873, 1932, 2401, 2921, 3110
BspLI GGNNCC 2 cut(s) 1506, 3195
BspMAI CTGCAG 3 cut(s) 1447, 2026, 2841
BspMI ACCTGC 2 cut(s) 266, 364
BspOI GCTAGC 1 cut(s) 2507
BspPI GGATC 6 cut(s) 204, 2056, 2057, 2414, 2642, 2719
BspQI GCTCTTC 1 cut(s) 3031
BspT104I TTCGAA 2 cut(s) 898, 1760
BspT107I GGYRCC 1 cut(s) 3193
BspTI CTTAAG 1 cut(s) 2852
BspTNI GGTCTC 1 cut(s) 2079
BsrBI CCGCTC 2 cut(s) 609, 778
BsrDI GCAATG 2 cut(s) 219, 2875
BsrFI RCCGGY 1 cut(s) 583
BsrGI TGTACA 1 cut(s) 2760
BsrI ACTGG 8 cut(s) 73, 339, 430, 873, 1079, 1147, 1305, 1430
BssAI RCCGGY 1 cut(s) 583
BssNAI GTATAC 1 cut(s) 434
BssNI GRCGYC 2 cut(s) 739, 2593
BssSI CACGAG 3 cut(s) 1098, 2223, 2858
BssT1I CCWWGG 9 cut(s) 21, 299, 503, 1481, 1736, 2317, 2587, 2686, 3189
Bst1107I GTATAC 1 cut(s) 434
Bst2BI CACGAG 3 cut(s) 1098, 2223, 2858
Bst2UI CCWGG 3 cut(s) 108, 1512, 3152
Bst6I CTCTTC 5 cut(s) 179, 913, 1709, 3031, 3150
BstACI GRCGYC 2 cut(s) 739, 2593
BstAFI CTTAAG 1 cut(s) 2852
BstAPI GCANNNNNTGC 4 cut(s) 155, 1256, 2030, 2246
BstAUI TGTACA 1 cut(s) 2760
BstBAI YACGTR 1 cut(s) 1790
BstBI TTCGAA 2 cut(s) 898, 1760
BstDSI CCRYGG 5 cut(s) 1481, 1801, 2317, 2686, 3189
BstEII GGTNACC 1 cut(s) 718
BstF5I GGATG 8 cut(s) 526, 549, 742, 935, 1045, 1746, 2548, 3015
BstFNI CGCG 5 cut(s) 1873, 1932, 2401, 2921, 3110
BstH2I RGCGCY 1 cut(s) 2625
BstHHI GCGC 2 cut(s) 2401, 2624
BstMAI GTCTC 6 cut(s) 298, 1063, 2079, 2489, 2703, 2812
BstMCI CGRYCG 1 cut(s) 1801
BstNI CCWGG 3 cut(s) 108, 1512, 3152
BstNSI RCATGY 2 cut(s) 1954, 2767
BstPI GGTNACC 1 cut(s) 718
BstSCI CCNGG 4 cut(s) 106, 837, 1510, 3150
BstSFI CTRYAG 4 cut(s) 177, 1443, 2022, 2837
BstSLI GKGCMC 1 cut(s) 844
BstUI CGCG 5 cut(s) 1873, 1932, 2401, 2921, 3110
BstV2I GAAGAC 2 cut(s) 464, 1035
BstX2I RGATCY 5 cut(s) 37, 647, 2048, 2647, 2711
BstYI RGATCY 5 cut(s) 37, 647, 2048, 2647, 2711
BstZ17I GTATAC 1 cut(s) 434
Bsu36I CCTNAGG 2 cut(s) 747, 1188
BsuI GTATCC 2 cut(s) 682, 745
BsuRI GGCC 5 cut(s) 1433, 1486, 2662, 2880, 3252
BtgI CCRYGG 5 cut(s) 1481, 1801, 2317, 2686, 3189
BtgZI GCGATG 1 cut(s) 2416
BtrI CACGTC 1 cut(s) 1049
BtsCI GGATG 8 cut(s) 526, 549, 742, 935, 1045, 1746, 2548, 3015
BtsI GCAGTG 3 cut(s) 88, 1010, 2293
BtuMI TCGCGA 1 cut(s) 1873
BveI ACCTGC 2 cut(s) 266, 364
CaiI CAGNNNCTG 4 cut(s) 281, 446, 1892, 3123
CfoI GCGC 2 cut(s) 2401, 2624
Cfr10I RCCGGY 1 cut(s) 583
Cfr13I GGNCC 3 cut(s) 1505, 1693, 2878
CseI GACGC 5 cut(s) 728, 2601, 2927, 3116, 3245
CsiI ACCWGGT 1 cut(s) 106
EaeI YGGCCR 2 cut(s) 1431, 1484
Eam1104I CTCTTC 5 cut(s) 179, 913, 1709, 3031, 3150
EarI CTCTTC 5 cut(s) 179, 913, 1709, 3031, 3150
EciI GGCGGA 2 cut(s) 1497, 3022
Ecl136II GAGCTC 1 cut(s) 3041
Eco130I CCWWGG 9 cut(s) 21, 299, 503, 1481, 1736, 2317, 2587, 2686, 3189
Eco147I AGGCCT 2 cut(s) 2662, 3252
Eco24I GRGCYC 1 cut(s) 3043
Eco31I GGTCTC 1 cut(s) 2079
Eco32I GATATC 2 cut(s) 1195, 3001
Eco47I GGWCC 2 cut(s) 1505, 1693
Eco47III AGCGCT 1 cut(s) 2623
Eco53kI GAGCTC 1 cut(s) 3041
Eco57I CTGAAG 6 cut(s) 558, 1616, 2088, 2756, 2804, 3216
Eco72I CACGTG 1 cut(s) 1790
Eco81I CCTNAGG 2 cut(s) 747, 1188
Eco88I CYCGRG 1 cut(s) 1848
Eco91I GGTNACC 1 cut(s) 718
EcoICRI GAGCTC 1 cut(s) 3041
EcoO65I GGTNACC 1 cut(s) 718
EcoRII CCWGG 3 cut(s) 106, 1510, 3150
EcoRV GATATC 2 cut(s) 1195, 3001
EcoT14I CCWWGG 9 cut(s) 21, 299, 503, 1481, 1736, 2317, 2587, 2686, 3189
EcoT22I ATGCAT 5 cut(s) 1440, 2104, 2550, 2769, 3064
EcoT38I GRGCYC 1 cut(s) 3043
ErhI CCWWGG 9 cut(s) 21, 299, 503, 1481, 1736, 2317, 2587, 2686, 3189
FalI AAGNNNNNCTT 2 cut(s) 553, 585
FaqI GGGAC 2 cut(s) 311, 1821
FauI CCCGC 3 cut(s) 1937, 2685, 2791
FauNDI CATATG 1 cut(s) 886
FbaI TGATCA 1 cut(s) 1909
FblI GTMKAC 2 cut(s) 433, 2916
FokI GGATG 8 cut(s) 533, 556, 729, 942, 1052, 1753, 2535, 3022
FriOI GRGCYC 1 cut(s) 3043
GlaI GCGC 2 cut(s) 2400, 2623
GsuI CTGGAG 1 cut(s) 322
HaeII RGCGCY 1 cut(s) 2625
HaeIII GGCC 5 cut(s) 1433, 1486, 2662, 2880, 3252
HapII CCGG 4 cut(s) 584, 838, 1310, 3004
HgaI GACGC 5 cut(s) 728, 2601, 2927, 3116, 3245
HhaI GCGC 2 cut(s) 2401, 2624
Hin1I GRCGYC 2 cut(s) 739, 2593
Hin6I GCGC 2 cut(s) 2399, 2622
HinP1I GCGC 2 cut(s) 2399, 2622
HincII GTYRAC 1 cut(s) 1378
HindII GTYRAC 1 cut(s) 1378
HindIII AAGCTT 2 cut(s) 1178, 1393
HpaII CCGG 4 cut(s) 584, 838, 1310, 3004
HphI GGTGA 6 cut(s) 86, 130, 730, 1477, 2429, 3061
Hpy99I CGWCG 1 cut(s) 1937
HpyAV CCTTC 8 cut(s) 71, 429, 533, 540, 1767, 2177, 2580, 3240
HpyCH4IV ACGT 6 cut(s) 703, 1048, 1789, 2038, 2938, 3268
HpySE526I ACGT 6 cut(s) 703, 1048, 1789, 2038, 2938, 3268
Hsp92I GRCGYC 2 cut(s) 739, 2593
HspAI GCGC 2 cut(s) 2399, 2622
Kpn2I TCCGGA 1 cut(s) 1309
KroI GCCGGC 1 cut(s) 583
KroNI GCCGGC 1 cut(s) 585
Ksp22I TGATCA 1 cut(s) 1909
LguI GCTCTTC 1 cut(s) 3031
LmnI GCTCC 8 cut(s) 341, 1103, 1312, 1333, 1408, 1759, 1897, 2629
LweI GCATC 8 cut(s) 1030, 1210, 1272, 1731, 2089, 2557, 2776, 3071
MabI ACCWGGT 1 cut(s) 106
MaeII ACGT 6 cut(s) 703, 1048, 1789, 2038, 2938, 3268
MaeIII GTNAC 6 cut(s) 718, 1091, 1325, 1955, 2106, 2198
MbiI CCGCTC 2 cut(s) 609, 778
MflI RGATCY 5 cut(s) 37, 647, 2048, 2647, 2711
MhlI GDGCHC 3 cut(s) 844, 1756, 3043
MlsI TGGCCA 1 cut(s) 1486
MluCI AATT 7 cut(s) 253, 1129, 1601, 2203, 2262, 2556, 3263
MluI ACGCGT 1 cut(s) 2919
MluNI TGGCCA 1 cut(s) 1486
MlyI GAGTC 4 cut(s) 1860, 2239, 2705, 3134
MmeI TCCRAC 4 cut(s) 1105, 2035, 2347, 2540
Mox20I TGGCCA 1 cut(s) 1486
Mph1103I ATGCAT 5 cut(s) 1440, 2104, 2550, 2769, 3064
MroI TCCGGA 1 cut(s) 1309
MroNI GCCGGC 1 cut(s) 583
MroXI GAANNNNTTC 1 cut(s) 2496
MscI TGGCCA 1 cut(s) 1486
MslI CAYNNNNRTG 3 cut(s) 1038, 1119, 2706
Msp20I TGGCCA 1 cut(s) 1486
MspA1I CMGCKG 3 cut(s) 1411, 1448, 2842
MspCI CTTAAG 1 cut(s) 2852
MspI CCGG 4 cut(s) 584, 838, 1310, 3004
MspR9I CCNGG 4 cut(s) 108, 839, 1512, 3152
Mva1269I GAATGC 3 cut(s) 839, 1768, 2550
MvaI CCWGG 3 cut(s) 108, 1512, 3152
MvnI CGCG 5 cut(s) 1873, 1932, 2401, 2921, 3110
NaeI GCCGGC 1 cut(s) 585
NciI CCSGG 1 cut(s) 839
NcoI CCATGG 4 cut(s) 1481, 2317, 2686, 3189
NdeI CATATG 1 cut(s) 886
NgoMIV GCCGGC 1 cut(s) 583
NheI GCTAGC 1 cut(s) 2503
NlaIV GGNNCC 2 cut(s) 1506, 3195
NmuCI GTSAC 2 cut(s) 718, 1091
NruI TCGCGA 1 cut(s) 1873
NsiI ATGCAT 5 cut(s) 1440, 2104, 2550, 2769, 3064
NspI RCATGY 2 cut(s) 1954, 2767
NspV TTCGAA 2 cut(s) 898, 1760
PaeR7I CTCGAG 1 cut(s) 1848
PaqCI CACCTGC 1 cut(s) 364
PceI AGGCCT 2 cut(s) 2662, 3252
PciSI GCTCTTC 1 cut(s) 3031
PcsI WCGNNNNNNNCGW 2 cut(s) 709, 1951
PctI GAATGC 3 cut(s) 839, 1768, 2550
PdiI GCCGGC 1 cut(s) 585
PdmI GAANNNNTTC 1 cut(s) 2496
PfeI GAWTC 8 cut(s) 5, 443, 476, 785, 1019, 1862, 1939, 2745
PleI GAGTC 4 cut(s) 1859, 2238, 2704, 3134
PmaCI CACGTG 1 cut(s) 1790
PmlI CACGTG 1 cut(s) 1790
PpsI GAGTC 4 cut(s) 1859, 2238, 2704, 3134
Ppu21I YACGTR 1 cut(s) 1790
PshBI ATTAAT 1 cut(s) 2907
PsiI TTATAA 2 cut(s) 2948, 3183
Psp124BI GAGCTC 1 cut(s) 3043
Psp6I CCWGG 3 cut(s) 106, 1510, 3150
PspCI CACGTG 1 cut(s) 1790
PspEI GGTNACC 1 cut(s) 718
PspGI CCWGG 3 cut(s) 106, 1510, 3150
PspN4I GGNNCC 2 cut(s) 1506, 3195
PspPI GGNCC 3 cut(s) 1505, 1693, 2878
PspXI VCTCGAGB 1 cut(s) 1848
PstI CTGCAG 3 cut(s) 1447, 2026, 2841
PstNI CAGNNNCTG 4 cut(s) 281, 446, 1892, 3123
PsuI RGATCY 5 cut(s) 37, 647, 2048, 2647, 2711
PvuII CAGCTG 3 cut(s) 1411, 1448, 2842
RruI TCGCGA 1 cut(s) 1873
RseI CAYNNNNRTG 3 cut(s) 1038, 1119, 2706
SacI GAGCTC 1 cut(s) 3043
SapI GCTCTTC 1 cut(s) 3031
Sau96I GGNCC 3 cut(s) 1505, 1693, 2878
ScaI AGTACT 1 cut(s) 2148
SchI GAGTC 4 cut(s) 1860, 2239, 2705, 3134
ScrFI CCNGG 4 cut(s) 108, 839, 1512, 3152
SduI GDGCHC 3 cut(s) 844, 1756, 3043
SexAI ACCWGGT 1 cut(s) 106
SfaNI GCATC 8 cut(s) 1030, 1210, 1272, 1731, 2089, 2557, 2776, 3071
SfcI CTRYAG 4 cut(s) 177, 1443, 2022, 2837
Sfr274I CTCGAG 1 cut(s) 1848
SfuI TTCGAA 2 cut(s) 898, 1760
SinI GGWCC 2 cut(s) 1505, 1693
SlaI CTCGAG 1 cut(s) 1848
SmiMI CAYNNNNRTG 3 cut(s) 1038, 1119, 2706
SmlI CTYRAG 5 cut(s) 1848, 1881, 2213, 2234, 2852
SmoI CTYRAG 5 cut(s) 1848, 1881, 2213, 2234, 2852
SpeI ACTAGT 1 cut(s) 1454
Sse9I AATT 7 cut(s) 253, 1129, 1601, 2203, 2262, 2556, 3263
SseBI AGGCCT 2 cut(s) 2662, 3252
SspI AATATT 2 cut(s) 1580, 1654
SstI GAGCTC 1 cut(s) 3043
StuI AGGCCT 2 cut(s) 2662, 3252
StyD4I CCNGG 4 cut(s) 106, 837, 1510, 3150
StyI CCWWGG 9 cut(s) 21, 299, 503, 1481, 1736, 2317, 2587, 2686, 3189
TaiI ACGT 6 cut(s) 706, 1051, 1792, 2041, 2941, 3271
TaqII GACCGA 1 cut(s) 476
TasI AATT 7 cut(s) 253, 1129, 1601, 2203, 2262, 2556, 3263
TatI WGTACW 4 cut(s) 854, 2146, 2407, 2760
TauI GCSGC 1 cut(s) 1433
TfiI GAWTC 8 cut(s) 5, 443, 476, 785, 1019, 1862, 1939, 2745
TseFI GTSAC 2 cut(s) 718, 1091
Tsp45I GTSAC 2 cut(s) 718, 1091
TspGWI ACGGA 1 cut(s) 1189
Vha464I CTTAAG 1 cut(s) 2852
VpaK11BI GGWCC 2 cut(s) 1505, 1693
VspI ATTAAT 1 cut(s) 2907
XapI RAATTY 2 cut(s) 1129, 2556
XceI RCATGY 2 cut(s) 1954, 2767
XcmI CCANNNNNNNNNTGG 1 cut(s) 1040
XhoI CTCGAG 1 cut(s) 1848
XmaJI CCTAGG 2 cut(s) 299, 503
XmiI GTMKAC 2 cut(s) 433, 2916
XmnI GAANNNNTTC 1 cut(s) 2496
ZrmI AGTACT 1 cut(s) 2148
Zsp2I ATGCAT 5 cut(s) 1440, 2104, 2550, 2769, 3064
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.