AAA domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G19120 AT4G30100 AT4G30100 |
| fragaria_vesca | FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 |
| malus_domestica | MD08G1179700.v1.1 MD15G1364900.v1.1 |
| prunus_persica | Prupe.1G513000_v2.0.a1 Prupe.1G513000_v2.0.a1 Prupe.1G513000_v2.0.a1 |
| pyrus_communis | pycom08g15390 pycom13g22410 pycom15g32730 |
| rosa_chinensis | RchiOBHm_Chr7g0239841 |
| rosa_laevigata | RLG00000000726 |
| rosa_multiflora | Rmu_sc0000540.1_g000065 Rmu_sc0018325.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00220770 |
| rosa_rugosa | Rorug07G0329900 Rorug07G0330000 |
| rosa_samantha | Rh7AG483900 Rh7BG456900 Rh7CG501400 Rh7DG469600 |
| rosa_wichuraiana | Rw7G040590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 8 |
| AcsI | RAATTY | 1 cut(s) | 91 |
| AcuI | CTGAAG | 3 cut(s) | 107, 212, 348 |
| AflIII | ACRYGT | 1 cut(s) | 97 |
| AgsI | TTSAA | 1 cut(s) | 293 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 37, 69 |
| AluBI | AGCT | 2 cut(s) | 85, 119 |
| AluI | AGCT | 2 cut(s) | 85, 119 |
| Alw26I | GTCTC | 1 cut(s) | 185 |
| AlwI | GGATC | 1 cut(s) | 8 |
| ApeKI | GCWGC | 1 cut(s) | 82 |
| ApoI | RAATTY | 1 cut(s) | 91 |
| BbvI | GCAGC | 1 cut(s) | 94 |
| BceAI | ACGGC | 2 cut(s) | 201, 337 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 36 |
| BciVI | GTATCC | 1 cut(s) | 67 |
| BclI | TGATCA | 1 cut(s) | 123 |
| BcoDI | GTCTC | 1 cut(s) | 185 |
| BfmI | CTRYAG | 1 cut(s) | 21 |
| BfuI | GTATCC | 1 cut(s) | 67 |
| BisI | GCNGC | 1 cut(s) | 83 |
| BlsI | GCNGC | 1 cut(s) | 84 |
| BmsI | GCATC | 1 cut(s) | 159 |
| Bsa29I | ATCGAT | 1 cut(s) | 12 |
| BsaJI | CCNNGG | 1 cut(s) | 69 |
| BseCI | ATCGAT | 1 cut(s) | 12 |
| BseDI | CCNNGG | 1 cut(s) | 69 |
| BseRI | GAGGAG | 2 cut(s) | 220, 356 |
| BseXI | GCAGC | 1 cut(s) | 94 |
| BshVI | ATCGAT | 1 cut(s) | 12 |
| BsmAI | GTCTC | 1 cut(s) | 185 |
| Bsp143I | GATC | 2 cut(s) | 13, 123 |
| BspDI | ATCGAT | 1 cut(s) | 12 |
| BspMAI | CTGCAG | 1 cut(s) | 25 |
| BspPI | GGATC | 1 cut(s) | 8 |
| BssECI | CCNNGG | 1 cut(s) | 69 |
| BssMI | GATC | 2 cut(s) | 13, 123 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 156 |
| BstC8I | GCNNGC | 2 cut(s) | 113, 117 |
| BstDSI | CCRYGG | 1 cut(s) | 69 |
| BstKTI | GATC | 2 cut(s) | 16, 126 |
| BstMAI | GTCTC | 1 cut(s) | 185 |
| BstMBI | GATC | 2 cut(s) | 13, 123 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 156 |
| BstNSI | RCATGY | 4 cut(s) | 101, 138, 150, 272 |
| BstSFI | CTRYAG | 1 cut(s) | 21 |
| BstV1I | GCAGC | 1 cut(s) | 94 |
| Bsu15I | ATCGAT | 1 cut(s) | 12 |
| BsuI | GTATCC | 1 cut(s) | 67 |
| BsuTUI | ATCGAT | 1 cut(s) | 12 |
| BtgI | CCRYGG | 1 cut(s) | 69 |
| Cac8I | GCNNGC | 2 cut(s) | 113, 117 |
| ClaI | ATCGAT | 1 cut(s) | 12 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 255, 290 |
| CviAII | CATG | 6 cut(s) | 57, 98, 135, 147, 257, 269 |
| CviJI | RGCY | 5 cut(s) | 85, 115, 119, 188, 324 |
| CviKI_1 | RGCY | 5 cut(s) | 85, 115, 119, 188, 324 |
| DpnI | GATC | 2 cut(s) | 15, 125 |
| DpnII | GATC | 2 cut(s) | 13, 123 |
| Eco57I | CTGAAG | 3 cut(s) | 107, 212, 348 |
| EcoRI | GAATTC | 1 cut(s) | 91 |
| EcoT22I | ATGCAT | 2 cut(s) | 152, 274 |
| FaeI | CATG | 6 cut(s) | 60, 101, 138, 150, 260, 272 |
| FaiI | YATR | 7 cut(s) | 58, 99, 136, 148, 258, 270, 315 |
| FatI | CATG | 6 cut(s) | 56, 97, 134, 146, 256, 268 |
| FbaI | TGATCA | 1 cut(s) | 123 |
| Fnu4HI | GCNGC | 1 cut(s) | 83 |
| Fsp4HI | GCNGC | 1 cut(s) | 83 |
| GluI | GCNGC | 1 cut(s) | 83 |
| Hin1II | CATG | 6 cut(s) | 60, 101, 138, 150, 260, 272 |
| Hpy188I | TCNGA | 2 cut(s) | 192, 328 |
| Hpy188III | TCNNGA | 2 cut(s) | 215, 351 |
| HpyAV | CCTTC | 2 cut(s) | 27, 187 |
| HpyCH4V | TGCA | 4 cut(s) | 23, 150, 236, 272 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 156 |
| Hsp92II | CATG | 6 cut(s) | 60, 101, 138, 150, 260, 272 |
| Ksp22I | TGATCA | 1 cut(s) | 123 |
| Kzo9I | GATC | 2 cut(s) | 13, 123 |
| LpnPI | CCDG | 2 cut(s) | 129, 270 |
| Lsp1109I | GCAGC | 1 cut(s) | 94 |
| LweI | GCATC | 1 cut(s) | 159 |
| MaeIII | GTNAC | 1 cut(s) | 4 |
| MalI | GATC | 2 cut(s) | 15, 125 |
| MboI | GATC | 2 cut(s) | 13, 123 |
| MboII | GAAGA | 2 cut(s) | 100, 341 |
| MfeI | CAATTG | 1 cut(s) | 243 |
| MluCI | AATT | 3 cut(s) | 39, 91, 243 |
| MnlI | CCTC | 2 cut(s) | 198, 334 |
| Mph1103I | ATGCAT | 2 cut(s) | 152, 274 |
| MseI | TTAA | 1 cut(s) | 249 |
| MspA1I | CMGCKG | 1 cut(s) | 85 |
| MunI | CAATTG | 1 cut(s) | 243 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 156 |
| NdeII | GATC | 2 cut(s) | 13, 123 |
| NlaIII | CATG | 6 cut(s) | 60, 101, 138, 150, 260, 272 |
| NsiI | ATGCAT | 2 cut(s) | 152, 274 |
| NspI | RCATGY | 4 cut(s) | 101, 138, 150, 272 |
| PciI | ACATGT | 1 cut(s) | 97 |
| PkrI | GCNGC | 1 cut(s) | 84 |
| PscI | ACATGT | 1 cut(s) | 97 |
| PstI | CTGCAG | 1 cut(s) | 25 |
| PvuII | CAGCTG | 1 cut(s) | 85 |
| SaqAI | TTAA | 1 cut(s) | 249 |
| SatI | GCNGC | 1 cut(s) | 83 |
| Sau3AI | GATC | 2 cut(s) | 13, 123 |
| SetI | ASST | 5 cut(s) | 87, 121, 198, 289, 298 |
| SfaNI | GCATC | 1 cut(s) | 159 |
| SfcI | CTRYAG | 1 cut(s) | 21 |
| Sse9I | AATT | 3 cut(s) | 39, 91, 243 |
| TaqI | TCGA | 2 cut(s) | 12, 214 |
| TasI | AATT | 3 cut(s) | 39, 91, 243 |
| Tru1I | TTAA | 1 cut(s) | 249 |
| Tru9I | TTAA | 1 cut(s) | 249 |
| TseI | GCWGC | 1 cut(s) | 82 |
| TspDTI | ATGAA | 1 cut(s) | 45 |
| TspGWI | ACGGA | 1 cut(s) | 86 |
| XapI | RAATTY | 1 cut(s) | 91 |
| XceI | RCATGY | 4 cut(s) | 101, 138, 150, 272 |
| Zsp2I | ATGCAT | 2 cut(s) | 152, 274 |