AAA domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G19120 AT4G30100 AT4G30100 |
| fragaria_vesca | FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 |
| malus_domestica | MD08G1179700.v1.1 MD15G1364900.v1.1 |
| prunus_persica | Prupe.1G513000_v2.0.a1 Prupe.1G513000_v2.0.a1 Prupe.1G513000_v2.0.a1 |
| pyrus_communis | pycom08g15390 pycom13g22410 pycom15g32730 |
| rosa_chinensis | RchiOBHm_Chr7g0239841 |
| rosa_laevigata | RLG00000000726 |
| rosa_multiflora | Rmu_sc0000540.1_g000065 Rmu_sc0018325.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00220770 |
| rosa_rugosa | Rorug07G0329900 Rorug07G0330000 |
| rosa_samantha | Rh7AG483900 Rh7BG456900 Rh7CG501400 Rh7DG469600 |
| rosa_wichuraiana | Rw7G040590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 581 |
| Acc16I | TGCGCA | 1 cut(s) | 3878 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1474, 2135 |
| AccBSI | CCGCTC | 1 cut(s) | 2515 |
| AccI | GTMKAC | 2 cut(s) | 748, 4042 |
| AccII | CGCG | 3 cut(s) | 2464, 2808, 3582 |
| AccIII | TCCGGA | 1 cut(s) | 2680 |
| AcoI | YGGCCR | 2 cut(s) | 17, 1465 |
| AcsI | RAATTY | 5 cut(s) | 1147, 1990, 3770, 3920, 3982 |
| AcuI | CTGAAG | 8 cut(s) | 264, 563, 867, 1467, 1904, 2282, 3452, 3888 |
| AcvI | CACGTG | 3 cut(s) | 1712, 2405, 2489 |
| AcyI | GRCGYC | 1 cut(s) | 3208 |
| AdeI | CACNNNGTG | 1 cut(s) | 3020 |
| AfaI | GTAC | 9 cut(s) | 151, 1256, 1429, 1681, 1816, 1865, 2074, 2326, 3194 |
| AfeI | AGCGCT | 1 cut(s) | 253 |
| AflIII | ACRYGT | 5 cut(s) | 1251, 1669, 1709, 2404, 2486 |
| AjiI | CACGTC | 2 cut(s) | 306, 1670 |
| AjnI | CCWGG | 9 cut(s) | 619, 1318, 1595, 1600, 2128, 2496, 3731, 3808, 3887 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3643, 3675 |
| Alw21I | GWGCWC | 2 cut(s) | 305, 3931 |
| Alw26I | GTCTC | 7 cut(s) | 82, 1096, 1319, 2509, 2619, 3337, 3749 |
| Alw44I | GTGCAC | 2 cut(s) | 301, 3927 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 2135, 2645, 2648, 3738 |
| Ama87I | CYCGRG | 2 cut(s) | 9, 2697 |
| Aor13HI | TCCGGA | 1 cut(s) | 2680 |
| Aor51HI | AGCGCT | 1 cut(s) | 253 |
| ApaLI | GTGCAC | 2 cut(s) | 301, 3927 |
| ApoI | RAATTY | 5 cut(s) | 1147, 1990, 3770, 3920, 3982 |
| AseI | ATTAAT | 1 cut(s) | 1461 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 3817, 3901 |
| AspLEI | GCGC | 7 cut(s) | 254, 2369, 2464, 2810, 3582, 3584, 3879 |
| AsuC2I | CCSGG | 1 cut(s) | 1412 |
| AsuHPI | GGTGA | 6 cut(s) | 1073, 1583, 2444, 3044, 3430, 4022 |
| AvaI | CYCGRG | 2 cut(s) | 9, 2697 |
| AvaII | GGWCC | 9 cut(s) | 791, 940, 2024, 2123, 2701, 3262, 3779, 3788, 3851 |
| BaeGI | GKGCMC | 4 cut(s) | 305, 1417, 2345, 3931 |
| BalI | TGGCCA | 1 cut(s) | 1467 |
| BanII | GRGCYC | 2 cut(s) | 1964, 3658 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2973, 3005 |
| BauI | CACGAG | 2 cut(s) | 2838, 3642 |
| BbrPI | CACGTG | 3 cut(s) | 1712, 2405, 2489 |
| BbsI | GAAGAC | 4 cut(s) | 823, 2875, 3398, 3458 |
| Bbv12I | GWGCWC | 2 cut(s) | 305, 3931 |
| BbvCI | CCTCAGC | 1 cut(s) | 3039 |
| BccI | CCATC | 5 cut(s) | 401, 700, 833, 1726, 2423 |
| BceAI | ACGGC | 2 cut(s) | 32, 2486 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 395, 429, 1058, 1092, 1865, 1899 |
| BciT130I | CCWGG | 9 cut(s) | 621, 1320, 1597, 1602, 2130, 2498, 3733, 3810, 3889 |
| BclI | TGATCA | 4 cut(s) | 1783, 1999, 3714, 4000 |
| BcnI | CCSGG | 1 cut(s) | 1412 |
| BcoDI | GTCTC | 7 cut(s) | 82, 1096, 1319, 2509, 2619, 3337, 3749 |
| BfaI | CTAG | 6 cut(s) | 464, 993, 1041, 2352, 3189, 3942 |
| BfmI | CTRYAG | 6 cut(s) | 342, 357, 831, 1077, 1802, 2052 |
| BfoI | RGCGCY | 1 cut(s) | 255 |
| BglII | AGATCT | 3 cut(s) | 476, 3842, 4080 |
| BlpI | GCTNAGC | 1 cut(s) | 255 |
| Bme18I | GGWCC | 9 cut(s) | 791, 940, 2024, 2123, 2701, 3262, 3779, 3788, 3851 |
| BmeT110I | CYCGRG | 2 cut(s) | 9, 2697 |
| BmgBI | CACGTC | 2 cut(s) | 306, 1670 |
| BmiI | GGNNCC | 9 cut(s) | 618, 1139, 1653, 2026, 2702, 3264, 3780, 3789, 3790 |
| BmrI | ACTGGG | 3 cut(s) | 1920, 3352, 3712 |
| BmuI | ACTGGG | 3 cut(s) | 1920, 3352, 3712 |
| BoxI | GACNNNNGTC | 1 cut(s) | 510 |
| BpiI | GAAGAC | 4 cut(s) | 823, 2875, 3398, 3458 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2243, 2275 |
| BpmI | CTGGAG | 3 cut(s) | 486, 2112, 3371 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3039 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 255 |
| BpuEI | CTTGAG | 2 cut(s) | 659, 2870 |
| BpuMI | CCSGG | 1 cut(s) | 1412 |
| Bsa29I | ATCGAT | 1 cut(s) | 1704 |
| BsaAI | YACGTR | 5 cut(s) | 1431, 1712, 2405, 2489, 3283 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1026, 1782, 2313 |
| BsaHI | GRCGYC | 1 cut(s) | 3208 |
| BsaI | GGTCTC | 2 cut(s) | 2619, 3337 |
| BsaWI | WCCGGW | 1 cut(s) | 2680 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 859, 889 |
| Bse118I | RCCGGY | 1 cut(s) | 3957 |
| Bse1I | ACTGG | 9 cut(s) | 692, 1172, 1926, 2140, 2856, 2973, 3358, 3707, 3932 |
| Bse3DI | GCAATG | 1 cut(s) | 80 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1026, 1782, 2313 |
| BseAI | TCCGGA | 1 cut(s) | 2680 |
| BseBI | CCWGG | 9 cut(s) | 621, 1320, 1597, 1602, 2130, 2498, 3733, 3810, 3889 |
| BseCI | ATCGAT | 1 cut(s) | 1704 |
| BseGI | GGATG | 7 cut(s) | 553, 596, 825, 949, 1027, 2689, 3163 |
| BseJI | GATNNNNATC | 3 cut(s) | 1026, 1782, 2313 |
| BseMI | GCAATG | 1 cut(s) | 80 |
| BseMII | CTCAG | 6 cut(s) | 246, 1784, 2049, 2241, 2606, 3053 |
| BseNI | ACTGG | 9 cut(s) | 692, 1172, 1926, 2140, 2856, 2973, 3358, 3707, 3932 |
| BsePI | GCGCGC | 1 cut(s) | 3580 |
| BseRI | GAGGAG | 2 cut(s) | 1621, 1664 |
| BseSI | GKGCMC | 4 cut(s) | 305, 1417, 2345, 3931 |
| BseYI | CCCAGC | 4 cut(s) | 730, 983, 2028, 4058 |
| BsgI | GTGCAG | 2 cut(s) | 1919, 2997 |
| Bsh1236I | CGCG | 3 cut(s) | 2464, 2808, 3582 |
| BshVI | ATCGAT | 1 cut(s) | 1704 |
| BsiHKAI | GWGCWC | 2 cut(s) | 305, 3931 |
| BsiHKCI | CYCGRG | 2 cut(s) | 9, 2697 |
| BsiSI | CCGG | 3 cut(s) | 1411, 2681, 3958 |
| BslFI | GGGAC | 5 cut(s) | 654, 1763, 2714, 2761, 3801 |
| BsmAI | GTCTC | 7 cut(s) | 82, 1096, 1319, 2509, 2619, 3337, 3749 |
| BsmBI | CGTCTC | 1 cut(s) | 2509 |
| BsmFI | GGGAC | 5 cut(s) | 654, 1763, 2714, 2761, 3801 |
| BsmI | GAATGC | 5 cut(s) | 1412, 1982, 2166, 3165, 3679 |
| Bso31I | GGTCTC | 2 cut(s) | 2619, 3337 |
| BsoBI | CYCGRG | 2 cut(s) | 9, 2697 |
| Bsp1286I | GDGCHC | 6 cut(s) | 305, 1417, 1964, 2345, 3658, 3931 |
| Bsp13I | TCCGGA | 1 cut(s) | 2680 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 255 |
| Bsp19I | CCATGG | 3 cut(s) | 600, 1188, 3301 |
| BspCNI | CTCAG | 6 cut(s) | 247, 1785, 2048, 2242, 2605, 3052 |
| BspDI | ATCGAT | 1 cut(s) | 1704 |
| BspEI | TCCGGA | 1 cut(s) | 2680 |
| BspFNI | CGCG | 3 cut(s) | 2464, 2808, 3582 |
| BspLI | GGNNCC | 9 cut(s) | 618, 1139, 1653, 2026, 2702, 3264, 3780, 3789, 3790 |
| BspMAI | CTGCAG | 5 cut(s) | 361, 835, 1081, 1806, 2056 |
| BspQI | GCTCTTC | 1 cut(s) | 2622 |
| BspTNI | GGTCTC | 2 cut(s) | 2619, 3337 |
| BsrBI | CCGCTC | 1 cut(s) | 2515 |
| BsrDI | GCAATG | 1 cut(s) | 80 |
| BsrFI | RCCGGY | 1 cut(s) | 3957 |
| BsrI | ACTGG | 9 cut(s) | 692, 1172, 1926, 2140, 2856, 2973, 3358, 3707, 3932 |
| BssAI | RCCGGY | 1 cut(s) | 3957 |
| BssHII | GCGCGC | 1 cut(s) | 3580 |
| BssNAI | GTATAC | 1 cut(s) | 4043 |
| BssNI | GRCGYC | 1 cut(s) | 3208 |
| BssSI | CACGAG | 2 cut(s) | 2838, 3642 |
| BssT1I | CCWWGG | 9 cut(s) | 600, 1188, 2099, 2659, 3202, 3301, 3541, 3726, 3987 |
| Bst1107I | GTATAC | 1 cut(s) | 4043 |
| Bst2BI | CACGAG | 2 cut(s) | 2838, 3642 |
| Bst2UI | CCWGG | 9 cut(s) | 621, 1320, 1597, 1602, 2130, 2498, 3733, 3810, 3889 |
| Bst6I | CTCTTC | 3 cut(s) | 692, 2622, 3765 |
| BstACI | GRCGYC | 1 cut(s) | 3208 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1877, 2645 |
| BstBAI | YACGTR | 5 cut(s) | 1431, 1712, 2405, 2489, 3283 |
| BstC8I | GCNNGC | 8 cut(s) | 135, 339, 786, 1878, 1908, 3120, 3582, 4056 |
| BstDEI | CTNAG | 6 cut(s) | 255, 1793, 2035, 2250, 2592, 3039 |
| BstDSI | CCRYGG | 4 cut(s) | 600, 1188, 2416, 3301 |
| BstEII | GGTNACC | 1 cut(s) | 1291 |
| BstF5I | GGATG | 7 cut(s) | 553, 596, 825, 949, 1027, 2689, 3163 |
| BstFNI | CGCG | 3 cut(s) | 2464, 2808, 3582 |
| BstH2I | RGCGCY | 1 cut(s) | 255 |
| BstHHI | GCGC | 7 cut(s) | 254, 2369, 2464, 2810, 3582, 3584, 3879 |
| BstMAI | GTCTC | 7 cut(s) | 82, 1096, 1319, 2509, 2619, 3337, 3749 |
| BstNI | CCWGG | 9 cut(s) | 621, 1320, 1597, 1602, 2130, 2498, 3733, 3810, 3889 |
| BstNSI | RCATGY | 3 cut(s) | 188, 1255, 1880 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 510 |
| BstPI | GGTNACC | 1 cut(s) | 1291 |
| BstSFI | CTRYAG | 6 cut(s) | 342, 357, 831, 1077, 1802, 2052 |
| BstSLI | GKGCMC | 4 cut(s) | 305, 1417, 2345, 3931 |
| BstSNI | TACGTA | 1 cut(s) | 3283 |
| BstUI | CGCG | 3 cut(s) | 2464, 2808, 3582 |
| BstV2I | GAAGAC | 4 cut(s) | 823, 2875, 3398, 3458 |
| BstX2I | RGATCY | 8 cut(s) | 410, 476, 1613, 2095, 2663, 3511, 3842, 4080 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1771 |
| BstYI | RGATCY | 8 cut(s) | 410, 476, 1613, 2095, 2663, 3511, 3842, 4080 |
| BstZ17I | GTATAC | 1 cut(s) | 4043 |
| Bsu15I | ATCGAT | 1 cut(s) | 1704 |
| BsuTUI | ATCGAT | 1 cut(s) | 1704 |
| BtgI | CCRYGG | 4 cut(s) | 600, 1188, 2416, 3301 |
| BtrI | CACGTC | 2 cut(s) | 306, 1670 |
| BtsCI | GGATG | 7 cut(s) | 553, 596, 825, 949, 1027, 2689, 3163 |
| BtsI | GCAGTG | 5 cut(s) | 339, 973, 1871, 2061, 2908 |
| Cac8I | GCNNGC | 8 cut(s) | 135, 339, 786, 1878, 1908, 3120, 3582, 4056 |
| CaiI | CAGNNNCTG | 4 cut(s) | 2135, 2645, 2648, 3738 |
| CfoI | GCGC | 7 cut(s) | 254, 2369, 2464, 2810, 3582, 3584, 3879 |
| Cfr10I | RCCGGY | 1 cut(s) | 3957 |
| ClaI | ATCGAT | 1 cut(s) | 1704 |
| CseI | GACGC | 2 cut(s) | 1265, 3216 |
| Csp6I | GTAC | 9 cut(s) | 150, 1255, 1428, 1680, 1815, 1864, 2073, 2325, 3193 |
| CviQI | GTAC | 9 cut(s) | 150, 1255, 1428, 1680, 1815, 1864, 2073, 2325, 3193 |
| DdeI | CTNAG | 6 cut(s) | 255, 1793, 2035, 2250, 2592, 3039 |
| DraIII | CACNNNGTG | 1 cut(s) | 3020 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 581 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 581 |
| EaeI | YGGCCR | 2 cut(s) | 17, 1465 |
| Eam1104I | CTCTTC | 3 cut(s) | 692, 2622, 3765 |
| EarI | CTCTTC | 3 cut(s) | 692, 2622, 3765 |
| EciI | GGCGGA | 1 cut(s) | 3608 |
| Eco105I | TACGTA | 1 cut(s) | 3283 |
| Eco130I | CCWWGG | 9 cut(s) | 600, 1188, 2099, 2659, 3202, 3301, 3541, 3726, 3987 |
| Eco147I | AGGCCT | 1 cut(s) | 1600 |
| Eco24I | GRGCYC | 2 cut(s) | 1964, 3658 |
| Eco31I | GGTCTC | 2 cut(s) | 2619, 3337 |
| Eco32I | GATATC | 1 cut(s) | 3616 |
| Eco47I | GGWCC | 9 cut(s) | 791, 940, 2024, 2123, 2701, 3262, 3779, 3788, 3851 |
| Eco47III | AGCGCT | 1 cut(s) | 253 |
| Eco57I | CTGAAG | 8 cut(s) | 264, 563, 867, 1467, 1904, 2282, 3452, 3888 |
| Eco72I | CACGTG | 3 cut(s) | 1712, 2405, 2489 |
| Eco88I | CYCGRG | 2 cut(s) | 9, 2697 |
| Eco91I | GGTNACC | 1 cut(s) | 1291 |
| EcoO109I | RGGNCCY | 3 cut(s) | 2123, 3262, 3788 |
| EcoO65I | GGTNACC | 1 cut(s) | 1291 |
| EcoRI | GAATTC | 2 cut(s) | 1147, 3982 |
| EcoRII | CCWGG | 9 cut(s) | 619, 1318, 1595, 1600, 2128, 2496, 3731, 3808, 3887 |
| EcoRV | GATATC | 1 cut(s) | 3616 |
| EcoT14I | CCWWGG | 9 cut(s) | 600, 1188, 2099, 2659, 3202, 3301, 3541, 3726, 3987 |
| EcoT22I | ATGCAT | 5 cut(s) | 190, 1882, 2571, 2719, 3165 |
| EcoT38I | GRGCYC | 2 cut(s) | 1964, 3658 |
| ErhI | CCWWGG | 9 cut(s) | 600, 1188, 2099, 2659, 3202, 3301, 3541, 3726, 3987 |
| Esp3I | CGTCTC | 1 cut(s) | 2509 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 963, 995 |
| FaqI | GGGAC | 5 cut(s) | 654, 1763, 2714, 2761, 3801 |
| FauI | CCCGC | 3 cut(s) | 2786, 3058, 3300 |
| FbaI | TGATCA | 4 cut(s) | 1783, 1999, 3714, 4000 |
| FblI | GTMKAC | 2 cut(s) | 748, 4042 |
| FokI | GGATG | 7 cut(s) | 560, 583, 812, 936, 1034, 2696, 3150 |
| FriOI | GRGCYC | 2 cut(s) | 1964, 3658 |
| FspAI | RTGCGCAY | 1 cut(s) | 3878 |
| FspBI | CTAG | 6 cut(s) | 464, 993, 1041, 2352, 3189, 3942 |
| FspI | TGCGCA | 1 cut(s) | 3878 |
| GlaI | GCGC | 7 cut(s) | 253, 2368, 2463, 2809, 3581, 3583, 3878 |
| GsaI | CCCAGC | 4 cut(s) | 734, 987, 2032, 4062 |
| GsuI | CTGGAG | 3 cut(s) | 486, 2112, 3371 |
| HaeII | RGCGCY | 1 cut(s) | 255 |
| HapII | CCGG | 3 cut(s) | 1411, 2681, 3958 |
| HgaI | GACGC | 2 cut(s) | 1265, 3216 |
| HhaI | GCGC | 7 cut(s) | 254, 2369, 2464, 2810, 3582, 3584, 3879 |
| Hin1I | GRCGYC | 1 cut(s) | 3208 |
| Hin6I | GCGC | 7 cut(s) | 252, 2367, 2462, 2808, 3580, 3582, 3877 |
| HinP1I | GCGC | 7 cut(s) | 252, 2367, 2462, 2808, 3580, 3582, 3877 |
| HindIII | AAGCTT | 2 cut(s) | 1214, 3815 |
| HpaII | CCGG | 3 cut(s) | 1411, 2681, 3958 |
| HphI | GGTGA | 6 cut(s) | 1073, 1583, 2444, 3044, 3430, 4022 |
| Hpy166II | GTNNAC | 9 cut(s) | 152, 303, 446, 749, 1557, 1667, 2327, 3929, 4043 |
| Hpy8I | GTNNAC | 9 cut(s) | 152, 303, 446, 749, 1557, 1667, 2327, 3929, 4043 |
| Hpy99I | CGWCG | 1 cut(s) | 1890 |
| HpyF3I | CTNAG | 6 cut(s) | 255, 1793, 2035, 2250, 2592, 3039 |
| Hsp92I | GRCGYC | 1 cut(s) | 3208 |
| HspAI | GCGC | 7 cut(s) | 252, 2367, 2462, 2808, 3580, 3582, 3877 |
| KflI | GGGWCCC | 1 cut(s) | 3788 |
| Kpn2I | TCCGGA | 1 cut(s) | 2680 |
| Ksp22I | TGATCA | 4 cut(s) | 1783, 1999, 3714, 4000 |
| LguI | GCTCTTC | 1 cut(s) | 2622 |
| LmnI | GCTCC | 8 cut(s) | 505, 1143, 1190, 1488, 1651, 1724, 2013, 2374 |
| MaeI | CTAG | 6 cut(s) | 464, 993, 1041, 2352, 3189, 3942 |
| MaeIII | GTNAC | 7 cut(s) | 314, 838, 921, 1174, 1247, 1291, 3590 |
| MbiI | CCGCTC | 1 cut(s) | 2515 |
| MfeI | CAATTG | 1 cut(s) | 2283 |
| MflI | RGATCY | 8 cut(s) | 410, 476, 1613, 2095, 2663, 3511, 3842, 4080 |
| MhlI | GDGCHC | 6 cut(s) | 305, 1417, 1964, 2345, 3658, 3931 |
| MlsI | TGGCCA | 1 cut(s) | 1467 |
| MluNI | TGGCCA | 1 cut(s) | 1467 |
| MlyI | GAGTC | 6 cut(s) | 673, 1064, 1367, 2755, 3320, 3751 |
| MmeI | TCCRAC | 2 cut(s) | 3155, 4048 |
| Mox20I | TGGCCA | 1 cut(s) | 1467 |
| Mph1103I | ATGCAT | 5 cut(s) | 190, 1882, 2571, 2719, 3165 |
| MroI | TCCGGA | 1 cut(s) | 2680 |
| MroXI | GAANNNNTTC | 2 cut(s) | 3817, 3901 |
| MscI | TGGCCA | 1 cut(s) | 1467 |
| MslI | CAYNNNNRTG | 3 cut(s) | 954, 1130, 1740 |
| Msp20I | TGGCCA | 1 cut(s) | 1467 |
| MspA1I | CMGCKG | 6 cut(s) | 146, 341, 836, 2645, 2738, 3074 |
| MspI | CCGG | 3 cut(s) | 1411, 2681, 3958 |
| MunI | CAATTG | 1 cut(s) | 2283 |
| Mva1269I | GAATGC | 5 cut(s) | 1412, 1982, 2166, 3165, 3679 |
| MvaI | CCWGG | 9 cut(s) | 621, 1320, 1597, 1602, 2130, 2498, 3733, 3810, 3889 |
| MvnI | CGCG | 3 cut(s) | 2464, 2808, 3582 |
| NciI | CCSGG | 1 cut(s) | 1412 |
| NcoI | CCATGG | 3 cut(s) | 600, 1188, 3301 |
| NlaIV | GGNNCC | 9 cut(s) | 618, 1139, 1653, 2026, 2702, 3264, 3780, 3789, 3790 |
| NmeAIII | GCCGAG | 1 cut(s) | 73 |
| NmuCI | GTSAC | 3 cut(s) | 921, 1174, 3590 |
| NsbI | TGCGCA | 1 cut(s) | 3878 |
| NsiI | ATGCAT | 5 cut(s) | 190, 1882, 2571, 2719, 3165 |
| NspI | RCATGY | 3 cut(s) | 188, 1255, 1880 |
| PaeI | GCATGC | 1 cut(s) | 1880 |
| PaeR7I | CTCGAG | 1 cut(s) | 9 |
| PauI | GCGCGC | 1 cut(s) | 3580 |
| PceI | AGGCCT | 1 cut(s) | 1600 |
| PciI | ACATGT | 1 cut(s) | 1251 |
| PciSI | GCTCTTC | 1 cut(s) | 2622 |
| PctI | GAATGC | 5 cut(s) | 1412, 1982, 2166, 3165, 3679 |
| PdmI | GAANNNNTTC | 2 cut(s) | 3817, 3901 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1474, 2135 |
| PfoI | TCCNGGA | 1 cut(s) | 2128 |
| PleI | GAGTC | 6 cut(s) | 672, 1064, 1366, 2755, 3319, 3751 |
| PmaCI | CACGTG | 3 cut(s) | 1712, 2405, 2489 |
| PmlI | CACGTG | 3 cut(s) | 1712, 2405, 2489 |
| PpsI | GAGTC | 6 cut(s) | 672, 1064, 1366, 2755, 3319, 3751 |
| Ppu21I | YACGTR | 5 cut(s) | 1431, 1712, 2405, 2489, 3283 |
| PpuMI | RGGWCCY | 3 cut(s) | 2123, 3262, 3788 |
| PscI | ACATGT | 1 cut(s) | 1251 |
| PshAI | GACNNNNGTC | 1 cut(s) | 510 |
| PshBI | ATTAAT | 1 cut(s) | 1461 |
| Psp5II | RGGWCCY | 3 cut(s) | 2123, 3262, 3788 |
| Psp6I | CCWGG | 9 cut(s) | 619, 1318, 1595, 1600, 2128, 2496, 3731, 3808, 3887 |
| PspCI | CACGTG | 3 cut(s) | 1712, 2405, 2489 |
| PspEI | GGTNACC | 1 cut(s) | 1291 |
| PspFI | CCCAGC | 4 cut(s) | 730, 983, 2028, 4058 |
| PspGI | CCWGG | 9 cut(s) | 619, 1318, 1595, 1600, 2128, 2496, 3731, 3808, 3887 |
| PspN4I | GGNNCC | 9 cut(s) | 618, 1139, 1653, 2026, 2702, 3264, 3780, 3789, 3790 |
| PspPPI | RGGWCCY | 3 cut(s) | 2123, 3262, 3788 |
| PstI | CTGCAG | 5 cut(s) | 361, 835, 1081, 1806, 2056 |
| PstNI | CAGNNNCTG | 4 cut(s) | 2135, 2645, 2648, 3738 |
| PsuI | RGATCY | 8 cut(s) | 410, 476, 1613, 2095, 2663, 3511, 3842, 4080 |
| PteI | GCGCGC | 1 cut(s) | 3580 |
| PvuII | CAGCTG | 4 cut(s) | 146, 341, 836, 2645 |
| RsaI | GTAC | 9 cut(s) | 151, 1256, 1429, 1681, 1816, 1865, 2074, 2326, 3194 |
| RsaNI | GTAC | 9 cut(s) | 150, 1255, 1428, 1680, 1815, 1864, 2073, 2325, 3193 |
| RseI | CAYNNNNRTG | 3 cut(s) | 954, 1130, 1740 |
| SapI | GCTCTTC | 1 cut(s) | 2622 |
| SchI | GAGTC | 6 cut(s) | 673, 1064, 1367, 2755, 3320, 3751 |
| SduI | GDGCHC | 6 cut(s) | 305, 1417, 1964, 2345, 3658, 3931 |
| SfcI | CTRYAG | 6 cut(s) | 342, 357, 831, 1077, 1802, 2052 |
| Sfr274I | CTCGAG | 1 cut(s) | 9 |
| SinI | GGWCC | 9 cut(s) | 791, 940, 2024, 2123, 2701, 3262, 3779, 3788, 3851 |
| SlaI | CTCGAG | 1 cut(s) | 9 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 954, 1130, 1740 |
| SmlI | CTYRAG | 3 cut(s) | 9, 674, 2849 |
| SmoI | CTYRAG | 3 cut(s) | 9, 674, 2849 |
| SnaBI | TACGTA | 1 cut(s) | 3283 |
| SphI | GCATGC | 1 cut(s) | 1880 |
| SseBI | AGGCCT | 1 cut(s) | 1600 |
| SspI | AATATT | 1 cut(s) | 523 |
| SspMI | CTAG | 6 cut(s) | 464, 993, 1041, 2352, 3189, 3942 |
| StuI | AGGCCT | 1 cut(s) | 1600 |
| StyI | CCWWGG | 9 cut(s) | 600, 1188, 2099, 2659, 3202, 3301, 3541, 3726, 3987 |
| TaqI | TCGA | 7 cut(s) | 10, 1001, 1704, 2475, 2710, 3480, 3870 |
| TaqII | GACCGA | 1 cut(s) | 3319 |
| TauI | GCSGC | 6 cut(s) | 88, 435, 567, 2741, 3074, 3624 |
| TseFI | GTSAC | 3 cut(s) | 921, 1174, 3590 |
| Tsp45I | GTSAC | 3 cut(s) | 921, 1174, 3590 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1474, 2135 |
| VneI | GTGCAC | 2 cut(s) | 301, 3927 |
| VpaK11BI | GGWCC | 9 cut(s) | 791, 940, 2024, 2123, 2701, 3262, 3779, 3788, 3851 |
| VspI | ATTAAT | 1 cut(s) | 1461 |
| XapI | RAATTY | 5 cut(s) | 1147, 1990, 3770, 3920, 3982 |
| XceI | RCATGY | 3 cut(s) | 188, 1255, 1880 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3772 |
| XhoI | CTCGAG | 1 cut(s) | 9 |
| XmiI | GTMKAC | 2 cut(s) | 748, 4042 |
| XmnI | GAANNNNTTC | 2 cut(s) | 3817, 3901 |
| XspI | CTAG | 6 cut(s) | 464, 993, 1041, 2352, 3189, 3942 |
| Zsp2I | ATGCAT | 5 cut(s) | 190, 1882, 2571, 2719, 3165 |