AAA domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G19120 AT4G30100 AT4G30100 |
| fragaria_vesca | FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 FvH4_5g37860 |
| malus_domestica | MD08G1179700.v1.1 MD15G1364900.v1.1 |
| prunus_persica | Prupe.1G513000_v2.0.a1 Prupe.1G513000_v2.0.a1 Prupe.1G513000_v2.0.a1 |
| pyrus_communis | pycom08g15390 pycom13g22410 pycom15g32730 |
| rosa_chinensis | RchiOBHm_Chr7g0239841 |
| rosa_laevigata | RLG00000000726 |
| rosa_multiflora | Rmu_sc0000540.1_g000065 Rmu_sc0018325.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00220770 |
| rosa_rugosa | Rorug07G0329900 Rorug07G0330000 |
| rosa_samantha | Rh7AG483900 Rh7BG456900 Rh7CG501400 Rh7DG469600 |
| rosa_wichuraiana | Rw7G040590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 799 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 491 |
| Acc16I | TGCGCA | 1 cut(s) | 3788 |
| Acc36I | ACCTGC | 1 cut(s) | 799 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1464, 2045 |
| AccBSI | CCGCTC | 1 cut(s) | 2425 |
| AccI | GTMKAC | 3 cut(s) | 421, 658, 3952 |
| AccII | CGCG | 3 cut(s) | 2398, 2718, 3492 |
| AccIII | TCCGGA | 2 cut(s) | 368, 2590 |
| AciI | CCGC | 7 cut(s) | 321, 475, 2425, 2648, 2982, 3217, 3529 |
| AcoI | YGGCCR | 2 cut(s) | 17, 2012 |
| AcsI | RAATTY | 7 cut(s) | 438, 1057, 1900, 3330, 3680, 3830, 3892 |
| AcuI | CTGAAG | 5 cut(s) | 188, 473, 1377, 1814, 2192 |
| AcvI | CACGTG | 3 cut(s) | 1341, 1622, 2315 |
| AdeI | CACNNNGTG | 1 cut(s) | 2930 |
| AfaI | GTAC | 6 cut(s) | 778, 1166, 1591, 1775, 1984, 3104 |
| AfeI | AGCGCT | 1 cut(s) | 160 |
| AflIII | ACRYGT | 5 cut(s) | 1161, 1579, 1619, 2314, 2396 |
| AhlI | ACTAGT | 1 cut(s) | 2674 |
| AjiI | CACGTC | 2 cut(s) | 213, 1580 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1003, 1035, 3553, 3585 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3831, 3863 |
| Alw21I | GWGCWC | 2 cut(s) | 412, 2281 |
| Alw26I | GTCTC | 5 cut(s) | 1229, 2419, 2691, 3247, 3659 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 152, 2045, 2443, 2555, 3648 |
| Ama87I | CYCGRG | 2 cut(s) | 9, 2373 |
| Aor13HI | TCCGGA | 2 cut(s) | 368, 2590 |
| Aor51HI | AGCGCT | 1 cut(s) | 160 |
| AoxI | GGCC | 9 cut(s) | 17, 1508, 2012, 2360, 2409, 2979, 3454, 3639, 3869 |
| ApoI | RAATTY | 7 cut(s) | 438, 1057, 1900, 3330, 3680, 3830, 3892 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1848, 2439 |
| AspLEI | GCGC | 6 cut(s) | 161, 583, 2720, 3492, 3494, 3789 |
| AspS9I | GGNCC | 8 cut(s) | 701, 1934, 2033, 2218, 2611, 3698, 3761, 3839 |
| AsuC2I | CCSGG | 1 cut(s) | 1322 |
| AsuHPI | GGTGA | 5 cut(s) | 983, 1493, 2354, 2954, 3932 |
| AvaI | CYCGRG | 2 cut(s) | 9, 2373 |
| AvaII | GGWCC | 8 cut(s) | 701, 1934, 2033, 2218, 2611, 3698, 3761, 3839 |
| BaeGI | GKGCMC | 2 cut(s) | 1327, 2255 |
| BalI | TGGCCA | 1 cut(s) | 2014 |
| BamHI | GGATCC | 2 cut(s) | 317, 3172 |
| BanII | GRGCYC | 2 cut(s) | 1874, 3568 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2883, 2915 |
| BauI | CACGAG | 2 cut(s) | 2748, 3552 |
| BbrPI | CACGTG | 3 cut(s) | 1341, 1622, 2315 |
| BbsI | GAAGAC | 3 cut(s) | 733, 3308, 3368 |
| Bbv12I | GWGCWC | 2 cut(s) | 412, 2281 |
| BbvCI | CCTCAGC | 1 cut(s) | 2949 |
| BccI | CCATC | 7 cut(s) | 308, 410, 610, 713, 1636, 2333, 3820 |
| BceAI | ACGGC | 4 cut(s) | 32, 125, 561, 2396 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1775, 1809 |
| BclI | TGATCA | 3 cut(s) | 1909, 3624, 3910 |
| BcnI | CCSGG | 1 cut(s) | 1322 |
| BcoDI | GTCTC | 5 cut(s) | 1229, 2419, 2691, 3247, 3659 |
| BcuI | ACTAGT | 1 cut(s) | 2674 |
| BfaI | CTAG | 8 cut(s) | 413, 903, 951, 2262, 2600, 2607, 2675, 3930 |
| BfmI | CTRYAG | 5 cut(s) | 264, 792, 987, 1962, 3843 |
| BfoI | RGCGCY | 1 cut(s) | 162 |
| BfuAI | ACCTGC | 1 cut(s) | 799 |
| BglII | AGATCT | 2 cut(s) | 3752, 3996 |
| BlpI | GCTNAGC | 1 cut(s) | 162 |
| Bme18I | GGWCC | 8 cut(s) | 701, 1934, 2033, 2218, 2611, 3698, 3761, 3839 |
| BmeT110I | CYCGRG | 2 cut(s) | 9, 2373 |
| BmgBI | CACGTC | 2 cut(s) | 213, 1580 |
| BmgT120I | GGNCC | 8 cut(s) | 701, 1934, 2033, 2218, 2611, 3698, 3761, 3839 |
| BmiI | GGNNCC | 9 cut(s) | 319, 528, 703, 1563, 1936, 2612, 2989, 3174, 3700 |
| BmrI | ACTGGG | 2 cut(s) | 650, 3622 |
| BmuI | ACTGGG | 2 cut(s) | 650, 3622 |
| BpiI | GAAGAC | 3 cut(s) | 733, 3308, 3368 |
| BpmI | CTGGAG | 2 cut(s) | 2022, 3281 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2949 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 162 |
| BpuEI | CTTGAG | 3 cut(s) | 569, 2780, 3082 |
| BpuMI | CCSGG | 1 cut(s) | 1322 |
| BsaAI | YACGTR | 3 cut(s) | 1341, 1622, 2315 |
| BsaBI | GATNNNNATC | 2 cut(s) | 936, 3751 |
| BsaWI | WCCGGW | 3 cut(s) | 368, 813, 2590 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 769, 799, 3785, 3815 |
| Bse118I | RCCGGY | 1 cut(s) | 3867 |
| Bse1I | ACTGG | 4 cut(s) | 645, 2050, 2883, 3617 |
| Bse3DI | GCAATG | 1 cut(s) | 436 |
| Bse8I | GATNNNNATC | 2 cut(s) | 936, 3751 |
| BseAI | TCCGGA | 2 cut(s) | 368, 2590 |
| BseGI | GGATG | 6 cut(s) | 463, 691, 859, 1714, 2599, 3073 |
| BseJI | GATNNNNATC | 2 cut(s) | 936, 3751 |
| BseMI | GCAATG | 1 cut(s) | 436 |
| BseMII | CTCAG | 7 cut(s) | 153, 1539, 1694, 2130, 2516, 2963, 3281 |
| BseNI | ACTGG | 4 cut(s) | 645, 2050, 2883, 3617 |
| BsePI | GCGCGC | 1 cut(s) | 3490 |
| BseRI | GAGGAG | 2 cut(s) | 74, 1574 |
| BseSI | GKGCMC | 2 cut(s) | 1327, 2255 |
| BseYI | CCCAGC | 5 cut(s) | 43, 893, 1835, 1938, 3974 |
| BsgI | GTGCAG | 5 cut(s) | 193, 726, 1829, 2907, 3603 |
| Bsh1236I | CGCG | 3 cut(s) | 2398, 2718, 3492 |
| BshFI | GGCC | 9 cut(s) | 19, 1510, 2014, 2362, 2411, 2981, 3456, 3641, 3871 |
| BsiHKAI | GWGCWC | 2 cut(s) | 412, 2281 |
| BsiHKCI | CYCGRG | 2 cut(s) | 9, 2373 |
| BsiSI | CCGG | 6 cut(s) | 369, 814, 1321, 2591, 2985, 3868 |
| BslFI | GGGAC | 4 cut(s) | 687, 1673, 2624, 3129 |
| BsmAI | GTCTC | 5 cut(s) | 1229, 2419, 2691, 3247, 3659 |
| BsmBI | CGTCTC | 1 cut(s) | 2419 |
| BsmFI | GGGAC | 4 cut(s) | 687, 1673, 2624, 3129 |
| BsmI | GAATGC | 4 cut(s) | 1322, 1892, 2076, 3075 |
| BsnI | GGCC | 9 cut(s) | 19, 1510, 2014, 2362, 2411, 2981, 3456, 3641, 3871 |
| BsoBI | CYCGRG | 2 cut(s) | 9, 2373 |
| Bsp1286I | GDGCHC | 6 cut(s) | 412, 1327, 1874, 2255, 2281, 3568 |
| Bsp13I | TCCGGA | 2 cut(s) | 368, 2590 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 162 |
| Bsp19I | CCATGG | 2 cut(s) | 510, 1098 |
| BspACI | CCGC | 7 cut(s) | 321, 475, 2425, 2648, 2982, 3217, 3529 |
| BspANI | GGCC | 9 cut(s) | 19, 1510, 2014, 2362, 2411, 2981, 3456, 3641, 3871 |
| BspCNI | CTCAG | 7 cut(s) | 154, 1540, 1695, 2131, 2515, 2962, 3280 |
| BspEI | TCCGGA | 2 cut(s) | 368, 2590 |
| BspFNI | CGCG | 3 cut(s) | 2398, 2718, 3492 |
| BspLI | GGNNCC | 9 cut(s) | 319, 528, 703, 1563, 1936, 2612, 2989, 3174, 3700 |
| BspMAI | CTGCAG | 4 cut(s) | 268, 796, 991, 1966 |
| BspMI | ACCTGC | 1 cut(s) | 799 |
| BsrBI | CCGCTC | 1 cut(s) | 2425 |
| BsrDI | GCAATG | 1 cut(s) | 436 |
| BsrFI | RCCGGY | 1 cut(s) | 3867 |
| BsrI | ACTGG | 4 cut(s) | 645, 2050, 2883, 3617 |
| BssAI | RCCGGY | 1 cut(s) | 3867 |
| BssHII | GCGCGC | 1 cut(s) | 3490 |
| BssNAI | GTATAC | 1 cut(s) | 3953 |
| BssSI | CACGAG | 2 cut(s) | 2748, 3552 |
| BssT1I | CCWWGG | 5 cut(s) | 510, 1098, 2569, 3451, 3636 |
| Bst1107I | GTATAC | 1 cut(s) | 3953 |
| Bst2BI | CACGAG | 2 cut(s) | 2748, 3552 |
| Bst6I | CTCTTC | 5 cut(s) | 285, 602, 1546, 2532, 3675 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 578, 1787, 2555, 2771 |
| BstBAI | YACGTR | 3 cut(s) | 1341, 1622, 2315 |
| BstC8I | GCNNGC | 9 cut(s) | 138, 246, 574, 696, 891, 1788, 2400, 3030, 3492 |
| BstDEI | CTNAG | 7 cut(s) | 162, 1548, 1703, 2139, 2502, 2949, 3267 |
| BstDSI | CCRYGG | 4 cut(s) | 279, 510, 1098, 2326 |
| BstEII | GGTNACC | 1 cut(s) | 1201 |
| BstF5I | GGATG | 6 cut(s) | 463, 691, 859, 1714, 2599, 3073 |
| BstFNI | CGCG | 3 cut(s) | 2398, 2718, 3492 |
| BstH2I | RGCGCY | 1 cut(s) | 162 |
| BstHHI | GCGC | 6 cut(s) | 161, 583, 2720, 3492, 3494, 3789 |
| BstMAI | GTCTC | 5 cut(s) | 1229, 2419, 2691, 3247, 3659 |
| BstNSI | RCATGY | 3 cut(s) | 1165, 1790, 3787 |
| BstPI | GGTNACC | 1 cut(s) | 1201 |
| BstSFI | CTRYAG | 5 cut(s) | 264, 792, 987, 1962, 3843 |
| BstSLI | GKGCMC | 2 cut(s) | 1327, 2255 |
| BstUI | CGCG | 3 cut(s) | 2398, 2718, 3492 |
| BstV2I | GAAGAC | 3 cut(s) | 733, 3308, 3368 |
| BstX2I | RGATCY | 8 cut(s) | 317, 2005, 2573, 3172, 3236, 3421, 3752, 3996 |
| BstYI | RGATCY | 8 cut(s) | 317, 2005, 2573, 3172, 3236, 3421, 3752, 3996 |
| BstZ17I | GTATAC | 1 cut(s) | 3953 |
| BsuRI | GGCC | 9 cut(s) | 19, 1510, 2014, 2362, 2411, 2981, 3456, 3641, 3871 |
| BtgI | CCRYGG | 4 cut(s) | 279, 510, 1098, 2326 |
| BtrI | CACGTC | 2 cut(s) | 213, 1580 |
| BtsCI | GGATG | 6 cut(s) | 463, 691, 859, 1714, 2599, 3073 |
| BtsI | GCAGTG | 5 cut(s) | 246, 883, 1781, 1971, 2818 |
| BveI | ACCTGC | 1 cut(s) | 799 |
| Cac8I | GCNNGC | 9 cut(s) | 138, 246, 574, 696, 891, 1788, 2400, 3030, 3492 |
| CaiI | CAGNNNCTG | 5 cut(s) | 152, 2045, 2443, 2555, 3648 |
| CfoI | GCGC | 6 cut(s) | 161, 583, 2720, 3492, 3494, 3789 |
| Cfr10I | RCCGGY | 1 cut(s) | 3867 |
| Cfr13I | GGNCC | 8 cut(s) | 701, 1934, 2033, 2218, 2611, 3698, 3761, 3839 |
| CseI | GACGC | 6 cut(s) | 61, 189, 1175, 2062, 2404, 3126 |
| Csp6I | GTAC | 6 cut(s) | 777, 1165, 1590, 1774, 1983, 3103 |
| CviQI | GTAC | 6 cut(s) | 777, 1165, 1590, 1774, 1983, 3103 |
| DdeI | CTNAG | 7 cut(s) | 162, 1548, 1703, 2139, 2502, 2949, 3267 |
| DraIII | CACNNNGTG | 1 cut(s) | 2930 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 491 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 491 |
| EaeI | YGGCCR | 2 cut(s) | 17, 2012 |
| Eam1104I | CTCTTC | 5 cut(s) | 285, 602, 1546, 2532, 3675 |
| EarI | CTCTTC | 5 cut(s) | 285, 602, 1546, 2532, 3675 |
| EciI | GGCGGA | 1 cut(s) | 3518 |
| Eco130I | CCWWGG | 5 cut(s) | 510, 1098, 2569, 3451, 3636 |
| Eco147I | AGGCCT | 1 cut(s) | 1510 |
| Eco24I | GRGCYC | 2 cut(s) | 1874, 3568 |
| Eco32I | GATATC | 2 cut(s) | 3205, 3526 |
| Eco47I | GGWCC | 8 cut(s) | 701, 1934, 2033, 2218, 2611, 3698, 3761, 3839 |
| Eco47III | AGCGCT | 1 cut(s) | 160 |
| Eco57I | CTGAAG | 5 cut(s) | 188, 473, 1377, 1814, 2192 |
| Eco72I | CACGTG | 3 cut(s) | 1341, 1622, 2315 |
| Eco88I | CYCGRG | 2 cut(s) | 9, 2373 |
| Eco91I | GGTNACC | 1 cut(s) | 1201 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2033, 3698 |
| EcoO65I | GGTNACC | 1 cut(s) | 1201 |
| EcoRI | GAATTC | 2 cut(s) | 1057, 3892 |
| EcoRV | GATATC | 2 cut(s) | 3205, 3526 |
| EcoT14I | CCWWGG | 5 cut(s) | 510, 1098, 2569, 3451, 3636 |
| EcoT22I | ATGCAT | 4 cut(s) | 1792, 2481, 2629, 3075 |
| EcoT38I | GRGCYC | 2 cut(s) | 1874, 3568 |
| ErhI | CCWWGG | 5 cut(s) | 510, 1098, 2569, 3451, 3636 |
| Esp3I | CGTCTC | 1 cut(s) | 2419 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 873, 905 |
| FaqI | GGGAC | 4 cut(s) | 687, 1673, 2624, 3129 |
| FauI | CCCGC | 1 cut(s) | 3210 |
| FbaI | TGATCA | 3 cut(s) | 1909, 3624, 3910 |
| FblI | GTMKAC | 3 cut(s) | 421, 658, 3952 |
| FokI | GGATG | 6 cut(s) | 470, 698, 846, 1701, 2606, 3060 |
| FriOI | GRGCYC | 2 cut(s) | 1874, 3568 |
| FspAI | RTGCGCAY | 1 cut(s) | 3788 |
| FspBI | CTAG | 8 cut(s) | 413, 903, 951, 2262, 2600, 2607, 2675, 3930 |
| FspI | TGCGCA | 1 cut(s) | 3788 |
| GlaI | GCGC | 6 cut(s) | 160, 582, 2719, 3491, 3493, 3788 |
| GsaI | CCCAGC | 5 cut(s) | 47, 897, 1839, 1942, 3978 |
| GsuI | CTGGAG | 2 cut(s) | 2022, 3281 |
| HaeII | RGCGCY | 1 cut(s) | 162 |
| HaeIII | GGCC | 9 cut(s) | 19, 1510, 2014, 2362, 2411, 2981, 3456, 3641, 3871 |
| HapII | CCGG | 6 cut(s) | 369, 814, 1321, 2591, 2985, 3868 |
| HgaI | GACGC | 6 cut(s) | 61, 189, 1175, 2062, 2404, 3126 |
| HhaI | GCGC | 6 cut(s) | 161, 583, 2720, 3492, 3494, 3789 |
| Hin6I | GCGC | 6 cut(s) | 159, 581, 2718, 3490, 3492, 3787 |
| HinP1I | GCGC | 6 cut(s) | 159, 581, 2718, 3490, 3492, 3787 |
| HpaII | CCGG | 6 cut(s) | 369, 814, 1321, 2591, 2985, 3868 |
| HphI | GGTGA | 5 cut(s) | 983, 1493, 2354, 2954, 3932 |
| Hpy166II | GTNNAC | 6 cut(s) | 353, 422, 659, 1467, 1577, 3953 |
| Hpy8I | GTNNAC | 6 cut(s) | 353, 422, 659, 1467, 1577, 3953 |
| Hpy99I | CGWCG | 3 cut(s) | 77, 217, 1800 |
| HpyCH4IV | ACGT | 9 cut(s) | 212, 231, 652, 1340, 1579, 1621, 1776, 2314, 3382 |
| HpyF3I | CTNAG | 7 cut(s) | 162, 1548, 1703, 2139, 2502, 2949, 3267 |
| HpySE526I | ACGT | 9 cut(s) | 212, 231, 652, 1340, 1579, 1621, 1776, 2314, 3382 |
| HspAI | GCGC | 6 cut(s) | 159, 581, 2718, 3490, 3492, 3787 |
| Kpn2I | TCCGGA | 2 cut(s) | 368, 2590 |
| Ksp22I | TGATCA | 3 cut(s) | 1909, 3624, 3910 |
| LmnI | GCTCC | 7 cut(s) | 850, 1100, 1398, 1561, 1634, 1923, 2284 |
| MaeI | CTAG | 8 cut(s) | 413, 903, 951, 2262, 2600, 2607, 2675, 3930 |
| MaeII | ACGT | 9 cut(s) | 212, 231, 652, 1340, 1579, 1621, 1776, 2314, 3382 |
| MaeIII | GTNAC | 6 cut(s) | 201, 831, 1157, 1201, 1363, 3222 |
| MbiI | CCGCTC | 1 cut(s) | 2425 |
| MfeI | CAATTG | 1 cut(s) | 2193 |
| MflI | RGATCY | 8 cut(s) | 317, 2005, 2573, 3172, 3236, 3421, 3752, 3996 |
| MhlI | GDGCHC | 6 cut(s) | 412, 1327, 1874, 2255, 2281, 3568 |
| MlsI | TGGCCA | 1 cut(s) | 2014 |
| MluI | ACGCGT | 1 cut(s) | 2396 |
| MluNI | TGGCCA | 1 cut(s) | 2014 |
| MlyI | GAGTC | 6 cut(s) | 73, 974, 3016, 3230, 3661, 3803 |
| MmeI | TCCRAC | 5 cut(s) | 1482, 1698, 3065, 3759, 3964 |
| Mox20I | TGGCCA | 1 cut(s) | 2014 |
| Mph1103I | ATGCAT | 4 cut(s) | 1792, 2481, 2629, 3075 |
| MroI | TCCGGA | 2 cut(s) | 368, 2590 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1848, 2439 |
| MscI | TGGCCA | 1 cut(s) | 2014 |
| MslI | CAYNNNNRTG | 6 cut(s) | 336, 627, 864, 1040, 1650, 3788 |
| Msp20I | TGGCCA | 1 cut(s) | 2014 |
| MspA1I | CMGCKG | 5 cut(s) | 152, 263, 323, 2552, 2648 |
| MspI | CCGG | 6 cut(s) | 369, 814, 1321, 2591, 2985, 3868 |
| MunI | CAATTG | 1 cut(s) | 2193 |
| Mva1269I | GAATGC | 4 cut(s) | 1322, 1892, 2076, 3075 |
| MvnI | CGCG | 3 cut(s) | 2398, 2718, 3492 |
| NciI | CCSGG | 1 cut(s) | 1322 |
| NcoI | CCATGG | 2 cut(s) | 510, 1098 |
| NlaIV | GGNNCC | 9 cut(s) | 319, 528, 703, 1563, 1936, 2612, 2989, 3174, 3700 |
| NmeAIII | GCCGAG | 1 cut(s) | 73 |
| NmuCI | GTSAC | 3 cut(s) | 201, 831, 3222 |
| NsbI | TGCGCA | 1 cut(s) | 3788 |
| NsiI | ATGCAT | 4 cut(s) | 1792, 2481, 2629, 3075 |
| NspI | RCATGY | 3 cut(s) | 1165, 1790, 3787 |
| PaeI | GCATGC | 1 cut(s) | 1790 |
| PaeR7I | CTCGAG | 1 cut(s) | 9 |
| PaqCI | CACCTGC | 1 cut(s) | 799 |
| PasI | CCCWGGG | 1 cut(s) | 1229 |
| PauI | GCGCGC | 1 cut(s) | 3490 |
| PceI | AGGCCT | 1 cut(s) | 1510 |
| PciI | ACATGT | 1 cut(s) | 1161 |
| PctI | GAATGC | 4 cut(s) | 1322, 1892, 2076, 3075 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1848, 2439 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1464, 2045 |
| PfoI | TCCNGGA | 1 cut(s) | 2038 |
| PleI | GAGTC | 6 cut(s) | 72, 974, 3015, 3229, 3661, 3802 |
| PmaCI | CACGTG | 3 cut(s) | 1341, 1622, 2315 |
| PmlI | CACGTG | 3 cut(s) | 1341, 1622, 2315 |
| PpsI | GAGTC | 6 cut(s) | 72, 974, 3015, 3229, 3661, 3802 |
| Ppu21I | YACGTR | 3 cut(s) | 1341, 1622, 2315 |
| PpuMI | RGGWCCY | 2 cut(s) | 2033, 3698 |
| PscI | ACATGT | 1 cut(s) | 1161 |
| Psp5II | RGGWCCY | 2 cut(s) | 2033, 3698 |
| PspCI | CACGTG | 3 cut(s) | 1341, 1622, 2315 |
| PspEI | GGTNACC | 1 cut(s) | 1201 |
| PspFI | CCCAGC | 5 cut(s) | 43, 893, 1835, 1938, 3974 |
| PspN4I | GGNNCC | 9 cut(s) | 319, 528, 703, 1563, 1936, 2612, 2989, 3174, 3700 |
| PspPI | GGNCC | 8 cut(s) | 701, 1934, 2033, 2218, 2611, 3698, 3761, 3839 |
| PspPPI | RGGWCCY | 2 cut(s) | 2033, 3698 |
| PstI | CTGCAG | 4 cut(s) | 268, 796, 991, 1966 |
| PstNI | CAGNNNCTG | 5 cut(s) | 152, 2045, 2443, 2555, 3648 |
| PsuI | RGATCY | 8 cut(s) | 317, 2005, 2573, 3172, 3236, 3421, 3752, 3996 |
| PteI | GCGCGC | 1 cut(s) | 3490 |
| PvuII | CAGCTG | 3 cut(s) | 152, 263, 2552 |
| RsaI | GTAC | 6 cut(s) | 778, 1166, 1591, 1775, 1984, 3104 |
| RsaNI | GTAC | 6 cut(s) | 777, 1165, 1590, 1774, 1983, 3103 |
| RseI | CAYNNNNRTG | 6 cut(s) | 336, 627, 864, 1040, 1650, 3788 |
| Sau96I | GGNCC | 8 cut(s) | 701, 1934, 2033, 2218, 2611, 3698, 3761, 3839 |
| SchI | GAGTC | 6 cut(s) | 73, 974, 3016, 3230, 3661, 3803 |
| SduI | GDGCHC | 6 cut(s) | 412, 1327, 1874, 2255, 2281, 3568 |
| SfcI | CTRYAG | 5 cut(s) | 264, 792, 987, 1962, 3843 |
| Sfr274I | CTCGAG | 1 cut(s) | 9 |
| SinI | GGWCC | 8 cut(s) | 701, 1934, 2033, 2218, 2611, 3698, 3761, 3839 |
| SlaI | CTCGAG | 1 cut(s) | 9 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 336, 627, 864, 1040, 1650, 3788 |
| SmlI | CTYRAG | 4 cut(s) | 9, 584, 2759, 3097 |
| SmoI | CTYRAG | 4 cut(s) | 9, 584, 2759, 3097 |
| SpeI | ACTAGT | 1 cut(s) | 2674 |
| SphI | GCATGC | 1 cut(s) | 1790 |
| SseBI | AGGCCT | 1 cut(s) | 1510 |
| SsiI | CCGC | 7 cut(s) | 321, 475, 2425, 2648, 2982, 3217, 3529 |
| SspMI | CTAG | 8 cut(s) | 413, 903, 951, 2262, 2600, 2607, 2675, 3930 |
| StuI | AGGCCT | 1 cut(s) | 1510 |
| StyI | CCWWGG | 5 cut(s) | 510, 1098, 2569, 3451, 3636 |
| TaiI | ACGT | 9 cut(s) | 215, 234, 655, 1343, 1582, 1624, 1779, 2317, 3385 |
| TaqI | TCGA | 8 cut(s) | 10, 215, 257, 757, 1614, 1798, 2620, 3390 |
| TauI | GCSGC | 3 cut(s) | 477, 2651, 2984 |
| TseFI | GTSAC | 3 cut(s) | 201, 831, 3222 |
| Tsp45I | GTSAC | 3 cut(s) | 201, 831, 3222 |
| TspGWI | ACGGA | 2 cut(s) | 268, 3074 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1464, 2045 |
| VpaK11BI | GGWCC | 8 cut(s) | 701, 1934, 2033, 2218, 2611, 3698, 3761, 3839 |
| XapI | RAATTY | 7 cut(s) | 438, 1057, 1900, 3330, 3680, 3830, 3892 |
| XbaI | TCTAGA | 2 cut(s) | 412, 3929 |
| XceI | RCATGY | 3 cut(s) | 1165, 1790, 3787 |
| XhoI | CTCGAG | 1 cut(s) | 9 |
| XmiI | GTMKAC | 3 cut(s) | 421, 658, 3952 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1848, 2439 |
| XspI | CTAG | 8 cut(s) | 413, 903, 951, 2262, 2600, 2607, 2675, 3930 |
| Zsp2I | ATGCAT | 4 cut(s) | 1792, 2481, 2629, 3075 |