AT2G19320

No description available

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
8370691 .. 8371108
418 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G19320.1

Sequence Viewer

Length: 234 bp
ATGGAGGCAACGAAAGAGAGAATGGAGAAAGACCAGAAAAAGAGAGTCGTCACCAACGAGGCGGGAAAAGCCGAAGACAACACGATAAGAACCATCATTCGTGAATCTATAGTGGAAGACAGAGGTTCCAACGACGATGATGGCAACAAAGACAACGACCATGGCGCTAGCAAGCCAGAGGACATTCTTGCTTTCTCAAGAACCGTACGAAAGATCGATTCGTCCCTCGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

77

Amino Acids

8.71

Weight (kDa)

5.04

Isoelectric Point (pI)

25.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0018328)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G19320
fragaria_vesca FvH4_4g06990
prunus_persica Prupe.1G073300_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0214671
rosa_multiflora Rmu_sc0003033.1_g000070
rosa_roxburghii Rroxscaffold_5G00344070
rosa_rugosa Rorug04G0013900
rosa_samantha Rh4BG089800 Rh4DG084400
rosa_wichuraiana Rw4G007580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 62
AfaI GTAC 1 cut(s) 207
Ama87I CYCGRG 1 cut(s) 227
AspLEI GCGC 1 cut(s) 167
AsuHPI GGTGA 1 cut(s) 43
AsuNHI GCTAGC 1 cut(s) 167
AvaI CYCGRG 1 cut(s) 227
BbsI GAAGAC 2 cut(s) 81, 123
BccI CCATC 2 cut(s) 101, 134
BfaI CTAG 1 cut(s) 168
BfmI CTRYAG 1 cut(s) 108
BfoI RGCGCY 1 cut(s) 168
BmeT110I CYCGRG 1 cut(s) 227
BmiI GGNNCC 1 cut(s) 127
BmtI GCTAGC 1 cut(s) 171
BpiI GAAGAC 2 cut(s) 81, 123
BpuEI CTTGAG 1 cut(s) 181
Bsa29I ATCGAT 1 cut(s) 216
BsaJI CCNNGG 1 cut(s) 160
BseCI ATCGAT 1 cut(s) 216
BseDI CCNNGG 1 cut(s) 160
BshVI ATCGAT 1 cut(s) 216
BsiHKCI CYCGRG 1 cut(s) 227
BsiWI CGTACG 1 cut(s) 205
BslFI GGGAC 1 cut(s) 208
BsmFI GGGAC 1 cut(s) 208
BsoBI CYCGRG 1 cut(s) 227
Bsp143I GATC 1 cut(s) 213
Bsp19I CCATGG 1 cut(s) 160
BspACI CCGC 1 cut(s) 62
BspDI ATCGAT 1 cut(s) 216
BspLI GGNNCC 1 cut(s) 127
BspOI GCTAGC 1 cut(s) 171
BssECI CCNNGG 1 cut(s) 160
BssMI GATC 1 cut(s) 213
BssT1I CCWWGG 1 cut(s) 160
Bst4CI ACNGT 1 cut(s) 205
BstC8I GCNNGC 2 cut(s) 169, 173
BstDSI CCRYGG 1 cut(s) 160
BstH2I RGCGCY 1 cut(s) 168
BstHHI GCGC 1 cut(s) 167
BstKTI GATC 1 cut(s) 216
BstMBI GATC 1 cut(s) 213
BstMWI GCNNNNNNNGC 1 cut(s) 68
BstSFI CTRYAG 1 cut(s) 108
BstV2I GAAGAC 2 cut(s) 81, 123
Bsu15I ATCGAT 1 cut(s) 216
BsuTUI ATCGAT 1 cut(s) 216
BtgI CCRYGG 1 cut(s) 160
Cac8I GCNNGC 2 cut(s) 169, 173
CfoI GCGC 1 cut(s) 167
ClaI ATCGAT 1 cut(s) 216
Csp6I GTAC 1 cut(s) 206
CviAII CATG 1 cut(s) 161
CviJI RGCY 2 cut(s) 71, 175
CviKI_1 RGCY 2 cut(s) 71, 175
CviQI GTAC 1 cut(s) 206
DpnI GATC 1 cut(s) 215
DpnII GATC 1 cut(s) 213
Eco130I CCWWGG 1 cut(s) 160
Eco88I CYCGRG 1 cut(s) 227
EcoT14I CCWWGG 1 cut(s) 160
ErhI CCWWGG 1 cut(s) 160
FaeI CATG 1 cut(s) 164
FaiI YATR 2 cut(s) 110, 162
FaqI GGGAC 1 cut(s) 208
FatI CATG 1 cut(s) 160
FauI CCCGC 1 cut(s) 55
FspBI CTAG 1 cut(s) 168
GlaI GCGC 1 cut(s) 166
HaeII RGCGCY 1 cut(s) 168
HhaI GCGC 1 cut(s) 167
Hin1II CATG 1 cut(s) 164
Hin6I GCGC 1 cut(s) 165
HinP1I GCGC 1 cut(s) 165
HinfI GANTC 3 cut(s) 45, 104, 218
HphI GGTGA 1 cut(s) 43
Hpy188III TCNNGA 2 cut(s) 101, 198
Hpy99I CGWCG 1 cut(s) 137
HpyCH4III ACNGT 1 cut(s) 205
HpyF10VI GCNNNNNNNGC 1 cut(s) 68
Hsp92II CATG 1 cut(s) 164
HspAI GCGC 1 cut(s) 165
Kzo9I GATC 1 cut(s) 213
LpnPI CCDG 2 cut(s) 47, 189
MaeI CTAG 1 cut(s) 168
MaeIII GTNAC 1 cut(s) 49
MalI GATC 1 cut(s) 215
MboI GATC 1 cut(s) 213
MboII GAAGA 2 cut(s) 86, 128
MlyI GAGTC 1 cut(s) 54
MmeI TCCRAC 1 cut(s) 153
MnlI CCTC 3 cut(s) 52, 116, 172
MwoI GCNNNNNNNGC 1 cut(s) 68
NcoI CCATGG 1 cut(s) 160
NdeII GATC 1 cut(s) 213
NheI GCTAGC 1 cut(s) 167
NlaIII CATG 1 cut(s) 164
NlaIV GGNNCC 1 cut(s) 127
NmuCI GTSAC 1 cut(s) 49
PaeR7I CTCGAG 1 cut(s) 227
PcsI WCGNNNNNNNCGW 1 cut(s) 54
PfeI GAWTC 2 cut(s) 104, 218
Pfl23II CGTACG 1 cut(s) 205
PleI GAGTC 1 cut(s) 53
PpsI GAGTC 1 cut(s) 53
PspLI CGTACG 1 cut(s) 205
PspN4I GGNNCC 1 cut(s) 127
PspXI VCTCGAGB 1 cut(s) 227
RsaI GTAC 1 cut(s) 207
RsaNI GTAC 1 cut(s) 206
Sau3AI GATC 1 cut(s) 213
SchI GAGTC 1 cut(s) 54
SetI ASST 1 cut(s) 127
SfcI CTRYAG 1 cut(s) 108
Sfr274I CTCGAG 1 cut(s) 227
SlaI CTCGAG 1 cut(s) 227
SmlI CTYRAG 2 cut(s) 196, 227
SmoI CTYRAG 2 cut(s) 196, 227
SsiI CCGC 1 cut(s) 62
SspMI CTAG 1 cut(s) 168
StyI CCWWGG 1 cut(s) 160
TaaI ACNGT 1 cut(s) 205
TaqI TCGA 2 cut(s) 216, 228
TfiI GAWTC 2 cut(s) 104, 218
TseFI GTSAC 1 cut(s) 49
Tsp45I GTSAC 1 cut(s) 49
XhoI CTCGAG 1 cut(s) 227
XspI CTAG 1 cut(s) 168
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.