Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0012330

Physical Location & Seq

Genomic Coordinates Forward (+)

8426117 .. 8429853

Gene Structure 3737 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G19450.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1563 bp

ATGGCGATTTTGGATTCTGCTGGCGTTACTACGGTGACGGAGAACGGTGGCGGAGAGTTCGTCGATCTTGATAGGCTTCGTCGACGGAAATCGAGATCGGATTCTTCTAACGGACTTCTTCTCTCTGGTTCCGATAATAATTCTCCTTCGGATGATGTTGGAGCTCCCGCCGACGTTAGGGATCGGATTGATTCCGTTGTTAACGATGACGCTCAGGGAACAGCCAATTTGGCCGGAGATAATAACGGTGGTGGCGATAATAACGGTGGTGGAAGAGGCGGCGGAGAAGGAAGAGGAAACGCCGATGCTACGTTTACGTATCGACCGTCGGTTCCAGCTCATCGGAGGGCGAGAGAGAGTCCACTTAGCTCCGACGCAATCTTCAAACAGAGCCATGCCGGATTATTCAACCTCTGTGTAGTAGTTCTTATTGCTGTAAACAGTAGACTCATCATCGAAAATCTTATGAAGTATGGTTGGTTGATCAGAACGGATTTCTGGTTTAGTTCAAGATCGCTGCGAGATTGGCCGCTTTTCATGTGTTGTATATCCCTTTCGATCTTTCCTTTGGCTGCCTTTACGGTTGAGAAATTGGTACTTCAGAAATACATATCAGAACCTGTTGTCATCTTTCTTCATATTATTATCACCATGACAGAGGTTTTGTATCCAGTTTACGTCACCCTAAGGTGTGATTCTGCTTTTTTATCAGGTGTCACTTTGATGCTCCTCACTTGCATTGTGTGGCTAAAGTTGGTTTCTTATGCTCATACTAGCTATGACATAAGATCCCTAGCCAATGCAGCTGATAAGGCCAATCCTGAAGTCTCCTACTACGTTAGCTTGAAGAGCTTGGCATATTTCATGGTCGCTCCCACATTGTGTTATCAGCCAAGTTATCCACGTTCTGCATGTATACGGAAGGGTTGGGTGGCTCGTCAATTTGCAAAACTGGTCATATTCACCGGATTCATGGGATTTATAATAGAACAATATATAAATCCTATTGTCAGGAACTCAAAGCATCCTTTGAAAGGCGATCTTCTATATGCTATTGAAAGAGTGTTGAAGCTTTCAGTTCCAAATTTATATGTGTGGCTCTGCATGTTCTACTGCTTCTTCCACCTTTGGTTAAACATATTGGCAGAGCTTCTCTGCTTCGGGGATCGTGAATTCTACAAAGATTGGTGGAATGCAAAAAGTGTGGGAGATTACTGGAGAATGTGGAATATGCCTGTTCATAAATGGATGGTTCGACATATATACTTCCCGTGCTTGCGCAGCAAGATACCAAAGACACTCGCCATTATCATTGCTTTCCTAGTCTCTGCAGTCTTTCATGAGCTATGCATCGCAGTTCCTTGTCGTCTCTTCAAGCTATGGGCTTTTCTTGGGATTATGTTTCAGGTGCCTTTGGTCTTCATCACAAACTATCTACAGGAAAGGTTTGGCTCAACGGTGGGGAACATGATCTTCTGGTTCATCTTCTGCATTTTCGGACAACCGATGTGTGTGCTTCTTTATTACCACGACCTGATGAACCGAAAAGGATCGATGTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004144 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005811 GO:0005975 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0006950 GO:0006970 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008374 GO:0008610 GO:0009058 GO:0009266 GO:0009409 GO:0009507 GO:0009526 GO:0009536 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009743 GO:0009746 GO:0009749 GO:0009790 GO:0009791 GO:0009793 GO:0009941 GO:0009987 GO:0010029 GO:0010030 GO:0010033 GO:0010154 GO:0012505 GO:0016020 GO:0016411 GO:0016740 GO:0016746 GO:0016747 GO:0019432 GO:0022414 GO:0031967 GO:0031975 GO:0031984 GO:0032501 GO:0032502 GO:0033993 GO:0034284 GO:0042175 GO:0042221 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0045995 GO:0046460 GO:0046463 GO:0046486 GO:0048316 GO:0048518 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051094 GO:0051239 GO:0051240 GO:0061458 GO:0065007 GO:0071704 GO:0097305 GO:0098827 GO:1900140 GO:1901576 GO:1901700 GO:2000026

KEGG Pathways

Metabolic & Signaling

ko00561 ko00830 ko01100 ko04975 map00561 map00830 map01100 map04975

Pfam Domains

Protein Families

MBOAT

Protein Analysis

520

Amino Acids

58.99

Weight (kDa)

8.85

Isoelectric Point (pI)

45.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MBOAT	PF03062	276 - 506	3.3e-28	MBOAT, membrane-bound O-acyltransferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012330)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19450
fragaria_vesca	FvH4_1g07910
malus_domestica	MD02G1082600.v1.1 MD15G1210700.v1.1
prunus_persica	Prupe.7G206100_v2.0.a1
pyrus_communis	pycom02g06550 pycom15g18660
rosa_chinensis	RchiOBHm_Chr2g0093781
rosa_laevigata	RLG00000016436
rosa_multiflora	Rmu_sc0002126.1_g000005 Rmu_sc0012116.1_g000002
rosa_roxburghii	Rroxscaffold_2G00147810
rosa_rugosa	Rorug02G0039700 Rorug02G0039800 Rorug02G0039900 Rorug02G0040000
rosa_samantha	Rh2AG086200 Rh2BG086500 Rh2DG084600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	983
Acc16I	TGCGCA	1 cut(s)	1280
AccB1I	GGYRCC	1 cut(s)	1408
AccI	GTMKAC	3 cut(s)	82, 445, 916
AciI	CCGC	5 cut(s)	51, 168, 279, 282, 530
AclWI	GGATC	4 cut(s)	189, 783, 1173, 1558
AcoI	YGGCCR	2 cut(s)	231, 527
AcsI	RAATTY	2 cut(s)	1084, 1172
AcuI	CTGAAG	2 cut(s)	584, 843
AdeI	CACNNNGTG	1 cut(s)	882
AfaI	GTAC	1 cut(s)	597
AfiI	CCNNNNNNNGG	2 cut(s)	177, 1034
AgsI	TTSAA	8 cut(s)	385, 409, 510, 847, 1033, 1058, 1069, 1375
Alw21I	GWGCWC	1 cut(s)	166
Alw26I	GTCTC	3 cut(s)	832, 1330, 1373
AlwI	GGATC	4 cut(s)	189, 783, 1173, 1558
AlwNI	CAGNNNCTG	1 cut(s)	620
AoxI	GGCC	3 cut(s)	231, 527, 813
ApeKI	GCWGC	4 cut(s)	517, 572, 803, 1281
ApoI	RAATTY	2 cut(s)	1084, 1172
ArsI	GACNNNNNNTTYG	2 cut(s)	646, 678
AspLEI	GCGC	1 cut(s)	1281
AsuHPI	GGTGA	4 cut(s)	46, 640, 673, 955
AxyI	CCTNAGG	1 cut(s)	686
BanI	GGYRCC	1 cut(s)	1408
BanII	GRGCYC	1 cut(s)	166
BbsI	GAAGAC	1 cut(s)	1411
Bbv12I	GWGCWC	1 cut(s)	166
BbvI	GCAGC	4 cut(s)	504, 559, 815, 1293
BccI	CCATC	1 cut(s)	1243
BcgI	CGANNNNNNTGC	2 cut(s)	1495, 1529
BciVI	GTATCC	1 cut(s)	678
BclI	TGATCA	1 cut(s)	483
BcoDI	GTCTC	3 cut(s)	832, 1330, 1373
BfaI	CTAG	3 cut(s)	774, 794, 1322
BfmI	CTRYAG	2 cut(s)	1329, 1436
BfuI	GTATCC	1 cut(s)	678
BglI	GCCNNNNNGGC	1 cut(s)	230
BisI	GCNGC	6 cut(s)	280, 518, 530, 573, 804, 1282
BlsI	GCNGC	6 cut(s)	281, 519, 531, 574, 805, 1283
BmiI	GGNNCC	3 cut(s)	130, 333, 1410
BmsI	GCATC	4 cut(s)	295, 714, 1033, 1359
BpiI	GAAGAC	1 cut(s)	1411
BpmI	CTGGAG	1 cut(s)	1237
Bpu10I	CCTNAGC	1 cut(s)	213
Bsa29I	ATCGAT	1 cut(s)	1553
BsaAI	YACGTR	1 cut(s)	318
BsaWI	WCCGGW	1 cut(s)	965
BsaXI	ACNNNNNCTCC	2 cut(s)	45, 75
Bsc4I	CCNNNNNNNGG	2 cut(s)	177, 1034
Bse1I	ACTGG	3 cut(s)	671, 957, 1220
Bse21I	CCTNAGG	1 cut(s)	686
Bse3DI	GCAATG	1 cut(s)	1311
BseCI	ATCGAT	1 cut(s)	1553
BseGI	GGATG	3 cut(s)	157, 1024, 1254
BseLI	CCNNNNNNNGG	2 cut(s)	177, 1034
BseMI	GCAATG	1 cut(s)	1311
BseMII	CTCAG	1 cut(s)	227
BseNI	ACTGG	3 cut(s)	671, 957, 1220
BseRI	GAGGAG	1 cut(s)	719
BseXI	GCAGC	4 cut(s)	504, 559, 815, 1293
Bsh1285I	CGRYCG	1 cut(s)	326
BshFI	GGCC	3 cut(s)	233, 529, 815
BshNI	GGYRCC	1 cut(s)	1408
BshVI	ATCGAT	1 cut(s)	1553
BsiEI	CGRYCG	1 cut(s)	326
BsiHKAI	GWGCWC	1 cut(s)	166
BsiSI	CCGG	3 cut(s)	234, 399, 966
BslI	CCNNNNNNNGG	2 cut(s)	177, 1034
BsmAI	GTCTC	3 cut(s)	832, 1330, 1373
BsmBI	CGTCTC	1 cut(s)	1373
BsmI	GAATGC	1 cut(s)	1198
BsnI	GGCC	3 cut(s)	233, 529, 815
Bsp1286I	GDGCHC	1 cut(s)	166
BspACI	CCGC	5 cut(s)	51, 168, 279, 282, 530
BspANI	GGCC	3 cut(s)	233, 529, 815
BspCNI	CTCAG	1 cut(s)	226
BspDI	ATCGAT	1 cut(s)	1553
BspHI	TCATGA	2 cut(s)	1339, 1559
BspLI	GGNNCC	3 cut(s)	130, 333, 1410
BspMAI	CTGCAG	1 cut(s)	1333
BspPI	GGATC	4 cut(s)	189, 783, 1173, 1558
BspQI	GCTCTTC	1 cut(s)	842
BspT107I	GGYRCC	1 cut(s)	1408
BsrDI	GCAATG	1 cut(s)	1311
BsrI	ACTGG	3 cut(s)	671, 957, 1220
BssNAI	GTATAC	1 cut(s)	917
Bst1107I	GTATAC	1 cut(s)	917
Bst4CI	ACNGT	8 cut(s)	34, 47, 248, 266, 327, 443, 583, 1459
Bst6I	CTCTTC	4 cut(s)	268, 286, 842, 1376
BstBAI	YACGTR	1 cut(s)	318
BstC8I	GCNNGC	2 cut(s)	22, 1277
BstDEI	CTNAG	3 cut(s)	213, 365, 686
BstENI	CCTNNNNNAGG	1 cut(s)	1032
BstF5I	GGATG	3 cut(s)	157, 1024, 1254
BstHHI	GCGC	1 cut(s)	1281
BstMAI	GTCTC	3 cut(s)	832, 1330, 1373
BstMCI	CGRYCG	1 cut(s)	326
BstMWI	GCNNNNNNNGC	6 cut(s)	230, 526, 803, 812, 849, 1281
BstNSI	RCATGY	2 cut(s)	915, 1108
BstSFI	CTRYAG	2 cut(s)	1329, 1436
BstSNI	TACGTA	1 cut(s)	318
BstV1I	GCAGC	4 cut(s)	504, 559, 815, 1293
BstV2I	GAAGAC	1 cut(s)	1411
BstX2I	RGATCY	1 cut(s)	788
BstYI	RGATCY	1 cut(s)	788
BstZ17I	GTATAC	1 cut(s)	917
Bsu15I	ATCGAT	1 cut(s)	1553
Bsu36I	CCTNAGG	1 cut(s)	686
BsuI	GTATCC	1 cut(s)	678
BsuRI	GGCC	3 cut(s)	233, 529, 815
BsuTUI	ATCGAT	1 cut(s)	1553
BtgZI	GCGATG	1 cut(s)	1336
BtsCI	GGATG	3 cut(s)	157, 1024, 1254
Cac8I	GCNNGC	2 cut(s)	22, 1277
CaiI	CAGNNNCTG	1 cut(s)	620
CciI	TCATGA	2 cut(s)	1339, 1559
CfoI	GCGC	1 cut(s)	1281
ClaI	ATCGAT	1 cut(s)	1553
CseI	GACGC	2 cut(s)	218, 383
Csp6I	GTAC	1 cut(s)	596
CspCI	CAANNNNNGTGG	2 cut(s)	1185, 1220
CviQI	GTAC	1 cut(s)	596
DdeI	CTNAG	3 cut(s)	213, 365, 686
DraIII	CACNNNGTG	1 cut(s)	882
EaeI	YGGCCR	2 cut(s)	231, 527
Eam1104I	CTCTTC	4 cut(s)	268, 286, 842, 1376
EarI	CTCTTC	4 cut(s)	268, 286, 842, 1376
EciI	GGCGGA	2 cut(s)	66, 297
Ecl136II	GAGCTC	1 cut(s)	164
Eco105I	TACGTA	1 cut(s)	318
Eco24I	GRGCYC	1 cut(s)	166
Eco53kI	GAGCTC	1 cut(s)	164
Eco57I	CTGAAG	2 cut(s)	584, 843
Eco81I	CCTNAGG	1 cut(s)	686
EcoICRI	GAGCTC	1 cut(s)	164
EcoNI	CCTNNNNNAGG	1 cut(s)	1032
EcoRI	GAATTC	1 cut(s)	1172
EcoT22I	ATGCAT	1 cut(s)	1352
EcoT38I	GRGCYC	1 cut(s)	166
Esp3I	CGTCTC	1 cut(s)	1373
FalI	AAGNNNNNCTT	2 cut(s)	1026, 1058
FauI	CCCGC	1 cut(s)	175
FbaI	TGATCA	1 cut(s)	483
FblI	GTMKAC	3 cut(s)	82, 445, 916
Fnu4HI	GCNGC	6 cut(s)	280, 518, 530, 573, 804, 1282
FokI	GGATG	3 cut(s)	164, 1011, 1261
FriOI	GRGCYC	1 cut(s)	166
Fsp4HI	GCNGC	6 cut(s)	280, 518, 530, 573, 804, 1282
FspBI	CTAG	3 cut(s)	774, 794, 1322
FspI	TGCGCA	1 cut(s)	1280
GlaI	GCGC	1 cut(s)	1280
GluI	GCNGC	6 cut(s)	280, 518, 530, 573, 804, 1282
GsuI	CTGGAG	1 cut(s)	1237
HaeIII	GGCC	3 cut(s)	233, 529, 815
HapII	CCGG	3 cut(s)	234, 399, 966
HgaI	GACGC	2 cut(s)	218, 383
HhaI	GCGC	1 cut(s)	1281
Hin6I	GCGC	1 cut(s)	1279
HinP1I	GCGC	1 cut(s)	1279
HincII	GTYRAC	2 cut(s)	83, 202
HindII	GTYRAC	2 cut(s)	83, 202
HindIII	AAGCTT	1 cut(s)	1070
HinfI	GANTC	7 cut(s)	14, 101, 191, 358, 447, 695, 969
HpaI	GTTAAC	1 cut(s)	202
HpaII	CCGG	3 cut(s)	234, 399, 966
HphI	GGTGA	4 cut(s)	46, 640, 673, 955
Hpy166II	GTNNAC	8 cut(s)	83, 202, 315, 362, 439, 446, 676, 917
Hpy188III	TCNNGA	8 cut(s)	68, 93, 510, 821, 1012, 1169, 1340, 1560
Hpy8I	GTNNAC	8 cut(s)	83, 202, 315, 362, 439, 446, 676, 917
Hpy99I	CGWCG	6 cut(s)	65, 84, 87, 176, 331, 377
HpyAV	CCTTC	3 cut(s)	156, 281, 916
HpyCH4III	ACNGT	8 cut(s)	34, 47, 248, 266, 327, 443, 583, 1459
HpyCH4IV	ACGT	6 cut(s)	174, 311, 317, 678, 837, 904
HpyCH4V	TGCA	9 cut(s)	738, 803, 911, 947, 1104, 1196, 1331, 1350, 1491
HpyF10VI	GCNNNNNNNGC	6 cut(s)	230, 526, 803, 812, 849, 1281
HpyF3I	CTNAG	3 cut(s)	213, 365, 686
HpySE526I	ACGT	6 cut(s)	174, 311, 317, 678, 837, 904
HspAI	GCGC	1 cut(s)	1279
Ksp22I	TGATCA	1 cut(s)	483
KspAI	GTTAAC	1 cut(s)	202
LguI	GCTCTTC	1 cut(s)	842
LmnI	GCTCC	5 cut(s)	161, 169, 374, 732, 877
Lsp1109I	GCAGC	4 cut(s)	504, 559, 815, 1293
LweI	GCATC	4 cut(s)	295, 714, 1033, 1359
MaeI	CTAG	3 cut(s)	774, 794, 1322
MaeII	ACGT	6 cut(s)	174, 311, 317, 678, 837, 904
MaeIII	GTNAC	4 cut(s)	25, 34, 679, 715
MflI	RGATCY	1 cut(s)	788
MhlI	GDGCHC	1 cut(s)	166
MluCI	AATT	6 cut(s)	139, 226, 590, 941, 1084, 1172
MlyI	GAGTC	2 cut(s)	367, 441
MmeI	TCCRAC	2 cut(s)	139, 396
MnlI	CCTC	6 cut(s)	269, 287, 339, 422, 652, 740
Mph1103I	ATGCAT	1 cut(s)	1352
MseI	TTAA	2 cut(s)	201, 1133
MslI	CAYNNNNRTG	1 cut(s)	722
MspA1I	CMGCKG	1 cut(s)	806
MspI	CCGG	3 cut(s)	234, 399, 966
Mva1269I	GAATGC	1 cut(s)	1198
MwoI	GCNNNNNNNGC	6 cut(s)	230, 526, 803, 812, 849, 1281
NlaIV	GGNNCC	3 cut(s)	130, 333, 1410
NmuCI	GTSAC	3 cut(s)	34, 679, 715
NsbI	TGCGCA	1 cut(s)	1280
NsiI	ATGCAT	1 cut(s)	1352
NspI	RCATGY	2 cut(s)	915, 1108
PagI	TCATGA	2 cut(s)	1339, 1559
PciSI	GCTCTTC	1 cut(s)	842
PcsI	WCGNNNNNNNCGW	2 cut(s)	252, 323
PctI	GAATGC	1 cut(s)	1198
PfeI	GAWTC	5 cut(s)	14, 101, 191, 695, 969
PkrI	GCNGC	6 cut(s)	281, 519, 531, 574, 805, 1283
PleI	GAGTC	2 cut(s)	366, 441
PpsI	GAGTC	2 cut(s)	366, 441
Ppu21I	YACGTR	1 cut(s)	318
PsiI	TTATAA	1 cut(s)	983
Psp124BI	GAGCTC	1 cut(s)	166
PspN4I	GGNNCC	3 cut(s)	130, 333, 1410
PstI	CTGCAG	1 cut(s)	1333
PstNI	CAGNNNCTG	1 cut(s)	620
PsuI	RGATCY	1 cut(s)	788
PvuII	CAGCTG	1 cut(s)	806
RsaI	GTAC	1 cut(s)	597
RsaNI	GTAC	1 cut(s)	596
RseI	CAYNNNNRTG	1 cut(s)	722
SacI	GAGCTC	1 cut(s)	166
SalI	GTCGAC	1 cut(s)	81
SapI	GCTCTTC	1 cut(s)	842
SaqAI	TTAA	2 cut(s)	201, 1133
SatI	GCNGC	6 cut(s)	280, 518, 530, 573, 804, 1282
SchI	GAGTC	2 cut(s)	367, 441
SduI	GDGCHC	1 cut(s)	166
SfaNI	GCATC	4 cut(s)	295, 714, 1033, 1359
SfcI	CTRYAG	2 cut(s)	1329, 1436
SgrDI	CGTCGACG	1 cut(s)	81
SmiMI	CAYNNNNRTG	1 cut(s)	722
SnaBI	TACGTA	1 cut(s)	318
Sse9I	AATT	6 cut(s)	139, 226, 590, 941, 1084, 1172
SsiI	CCGC	5 cut(s)	51, 168, 279, 282, 530
SspMI	CTAG	3 cut(s)	774, 794, 1322
SstI	GAGCTC	1 cut(s)	166
TaaI	ACNGT	8 cut(s)	34, 47, 248, 266, 327, 443, 583, 1459
TaiI	ACGT	6 cut(s)	177, 314, 320, 681, 840, 907
TaqI	TCGA	8 cut(s)	63, 82, 92, 322, 456, 557, 1255, 1553
TasI	AATT	6 cut(s)	139, 226, 590, 941, 1084, 1172
TauI	GCSGC	2 cut(s)	282, 532
TfiI	GAWTC	5 cut(s)	14, 101, 191, 695, 969
Tru1I	TTAA	2 cut(s)	201, 1133
Tru9I	TTAA	2 cut(s)	201, 1133
TseFI	GTSAC	3 cut(s)	34, 679, 715
TseI	GCWGC	4 cut(s)	517, 572, 803, 1281
Tsp45I	GTSAC	3 cut(s)	34, 679, 715
TspGWI	ACGGA	6 cut(s)	53, 100, 126, 184, 506, 934
XagI	CCTNNNNNAGG	1 cut(s)	1032
XapI	RAATTY	2 cut(s)	1084, 1172
XceI	RCATGY	2 cut(s)	915, 1108
XmiI	GTMKAC	3 cut(s)	82, 445, 916
XspI	CTAG	3 cut(s)	774, 794, 1322
Zsp2I	ATGCAT	1 cut(s)	1352

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.