Rorug02G0039700

O-acyltransferase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
3090734 .. 3091016
283 bp
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UTR
Exon/CDS
Intron
Rorug02G0039700.1

Sequence Viewer

Length: 201 bp
ATGGACCCAAAGATTGATCCTGCACGTAATAAACCTGGACTTGTTCTCAAAAGCTTGCTAGAGGTGGTCAAGCTCCGCTTCTTATCCTGCGCGATTGAGGAAGCGAAGGCTGAAAGGATGCGGAGAAGAGATTCTTGTGAGTCAGAGAATGAAACAATGGCAATAGAGACGGAGCAGAAGCTTGAAATAAAAGATGACTAG

Protein Analysis

66

Amino Acids

7.62

Weight (kDa)

5.2

Isoelectric Point (pI)

76.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 92
AciI CCGC 2 cut(s) 76, 121
AclWI GGATC 1 cut(s) 11
AgsI TTSAA 1 cut(s) 185
AjnI CCWGG 1 cut(s) 34
AluBI AGCT 3 cut(s) 54, 73, 181
AluI AGCT 3 cut(s) 54, 73, 181
Alw26I GTCTC 1 cut(s) 161
AlwI GGATC 1 cut(s) 11
Asp700I GAANNNNTTC 1 cut(s) 130
AspLEI GCGC 1 cut(s) 92
AspS9I GGNCC 1 cut(s) 4
AvaII GGWCC 1 cut(s) 4
BciT130I CCWGG 1 cut(s) 36
BcoDI GTCTC 1 cut(s) 161
BfaI CTAG 2 cut(s) 59, 199
Bme1390I CCNGG 1 cut(s) 36
Bme18I GGWCC 1 cut(s) 4
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 1 cut(s) 6
BmrFI CCNGG 1 cut(s) 36
BmsI GCATC 1 cut(s) 108
BsaAI YACGTR 1 cut(s) 26
BseBI CCWGG 1 cut(s) 36
BseGI GGATG 1 cut(s) 123
BsgI GTGCAG 1 cut(s) 6
Bsh1236I CGCG 1 cut(s) 92
BsmAI GTCTC 1 cut(s) 161
BsmBI CGTCTC 1 cut(s) 161
Bsp143I GATC 1 cut(s) 16
BspACI CCGC 2 cut(s) 76, 121
BspFNI CGCG 1 cut(s) 92
BspLI GGNNCC 1 cut(s) 6
BspPI GGATC 1 cut(s) 11
BssMI GATC 1 cut(s) 16
Bst2UI CCWGG 1 cut(s) 36
Bst6I CTCTTC 1 cut(s) 121
BstBAI YACGTR 1 cut(s) 26
BstC8I GCNNGC 1 cut(s) 56
BstF5I GGATG 1 cut(s) 123
BstFNI CGCG 1 cut(s) 92
BstHHI GCGC 1 cut(s) 92
BstKTI GATC 1 cut(s) 19
BstMAI GTCTC 1 cut(s) 161
BstMBI GATC 1 cut(s) 16
BstNI CCWGG 1 cut(s) 36
BstSCI CCNGG 1 cut(s) 34
BstUI CGCG 1 cut(s) 92
BtsCI GGATG 1 cut(s) 123
Cac8I GCNNGC 1 cut(s) 56
CfoI GCGC 1 cut(s) 92
Cfr13I GGNCC 1 cut(s) 4
CviJI RGCY 4 cut(s) 54, 73, 110, 181
CviKI_1 RGCY 4 cut(s) 54, 73, 110, 181
DpnI GATC 1 cut(s) 18
DpnII GATC 1 cut(s) 16
Eam1104I CTCTTC 1 cut(s) 121
EarI CTCTTC 1 cut(s) 121
Eco47I GGWCC 1 cut(s) 4
EcoRII CCWGG 1 cut(s) 34
Esp3I CGTCTC 1 cut(s) 161
FalI AAGNNNNNCTT 4 cut(s) 62, 94, 118, 150
FokI GGATG 1 cut(s) 130
FspBI CTAG 2 cut(s) 59, 199
GlaI GCGC 1 cut(s) 91
HhaI GCGC 1 cut(s) 92
Hin6I GCGC 1 cut(s) 90
HinP1I GCGC 1 cut(s) 90
HindIII AAGCTT 2 cut(s) 52, 179
HinfI GANTC 2 cut(s) 131, 140
Hpy188I TCNGA 1 cut(s) 145
HpyAV CCTTC 1 cut(s) 100
HpyCH4IV ACGT 1 cut(s) 25
HpyCH4V TGCA 1 cut(s) 23
HpySE526I ACGT 1 cut(s) 25
HspAI GCGC 1 cut(s) 90
Kzo9I GATC 1 cut(s) 16
LmnI GCTCC 2 cut(s) 78, 172
LpnPI CCDG 4 cut(s) 21, 33, 48, 100
LweI GCATC 1 cut(s) 108
MaeI CTAG 2 cut(s) 59, 199
MaeII ACGT 1 cut(s) 25
MalI GATC 1 cut(s) 18
MboI GATC 1 cut(s) 16
MboII GAAGA 1 cut(s) 138
MlyI GAGTC 1 cut(s) 149
MnlI CCTC 2 cut(s) 55, 91
MroXI GAANNNNTTC 1 cut(s) 130
MspR9I CCNGG 1 cut(s) 36
MvaI CCWGG 1 cut(s) 36
MvnI CGCG 1 cut(s) 92
NdeII GATC 1 cut(s) 16
NlaIV GGNNCC 1 cut(s) 6
PdmI GAANNNNTTC 1 cut(s) 130
PfeI GAWTC 1 cut(s) 131
PleI GAGTC 1 cut(s) 148
PpsI GAGTC 1 cut(s) 148
Ppu21I YACGTR 1 cut(s) 26
Psp6I CCWGG 1 cut(s) 34
PspGI CCWGG 1 cut(s) 34
PspN4I GGNNCC 1 cut(s) 6
PspPI GGNCC 1 cut(s) 4
Sau3AI GATC 1 cut(s) 16
Sau96I GGNCC 1 cut(s) 4
SchI GAGTC 1 cut(s) 149
ScrFI CCNGG 1 cut(s) 36
SetI ASST 6 cut(s) 28, 37, 56, 66, 75, 183
SfaNI GCATC 1 cut(s) 108
SinI GGWCC 1 cut(s) 4
SsiI CCGC 2 cut(s) 76, 121
SspMI CTAG 2 cut(s) 59, 199
StyD4I CCNGG 1 cut(s) 34
TaiI ACGT 1 cut(s) 28
TfiI GAWTC 1 cut(s) 131
TspDTI ATGAA 1 cut(s) 165
TspGWI ACGGA 1 cut(s) 185
VpaK11BI GGWCC 1 cut(s) 4
XmnI GAANNNNTTC 1 cut(s) 130
XspI CTAG 2 cut(s) 59, 199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.