Rorug02G0039800

O-acyltransferase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
3091094 .. 3091743
650 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0039800.1

Sequence Viewer

Length: 273 bp
ATGCAGCGGCGGCAGGAAGAACAACAAGGCGATACACCTGGAGGTATGTTGGGGAATGTTCAACAAGCTCACAATCGGAGTCAGGCTTCAGAGAATCAAATGGGGCCAAAGAGGAGGAAGCATTCAGAGTCGTGTTCAGGTCTTCCTGACATTTCTGAAATTGAGCGCCTAATAAAGAAAAGAGAGTACAGTAGCGATGAAGTTGATCGCTTAGTTGAGCTAGCTTATCGTATCACTAGAGAAAGAAGATATAGACAGCAGCGATCCTGTTGA

Protein Analysis

90

Amino Acids

10.6

Weight (kDa)

9.44

Isoelectric Point (pI)

83.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 7, 10
AclWI GGATC 1 cut(s) 258
AcuI CTGAAG 1 cut(s) 72
AfaI GTAC 1 cut(s) 188
AgsI TTSAA 1 cut(s) 62
AjnI CCWGG 1 cut(s) 37
AluBI AGCT 3 cut(s) 68, 220, 224
AluI AGCT 3 cut(s) 68, 220, 224
AlwI GGATC 1 cut(s) 258
AoxI GGCC 1 cut(s) 104
ApeKI GCWGC 2 cut(s) 4, 259
AspLEI GCGC 1 cut(s) 168
AspS9I GGNCC 1 cut(s) 104
AsuNHI GCTAGC 1 cut(s) 220
BbsI GAAGAC 1 cut(s) 134
BbvI GCAGC 1 cut(s) 16
BciT130I CCWGG 1 cut(s) 39
BfaI CTAG 2 cut(s) 221, 237
BfoI RGCGCY 1 cut(s) 169
BisI GCNGC 4 cut(s) 5, 8, 11, 260
BlsI GCNGC 4 cut(s) 6, 9, 12, 261
Bme1390I CCNGG 1 cut(s) 39
BmgT120I GGNCC 1 cut(s) 104
BmiI GGNNCC 1 cut(s) 105
BmrFI CCNGG 1 cut(s) 39
BmtI GCTAGC 1 cut(s) 224
BpiI GAAGAC 1 cut(s) 134
BpmI CTGGAG 1 cut(s) 60
BseBI CCWGG 1 cut(s) 39
BseRI GAGGAG 1 cut(s) 127
BseXI GCAGC 1 cut(s) 16
BshFI GGCC 1 cut(s) 106
BsmI GAATGC 1 cut(s) 121
BsnI GGCC 1 cut(s) 106
Bsp143I GATC 2 cut(s) 205, 263
BspACI CCGC 2 cut(s) 7, 10
BspANI GGCC 1 cut(s) 106
BspLI GGNNCC 1 cut(s) 105
BspOI GCTAGC 1 cut(s) 224
BspPI GGATC 1 cut(s) 258
BssMI GATC 2 cut(s) 205, 263
Bst2UI CCWGG 1 cut(s) 39
Bst4CI ACNGT 1 cut(s) 191
BstC8I GCNNGC 1 cut(s) 222
BstDEI CTNAG 1 cut(s) 211
BstH2I RGCGCY 1 cut(s) 169
BstHHI GCGC 1 cut(s) 168
BstKTI GATC 2 cut(s) 208, 266
BstMBI GATC 2 cut(s) 205, 263
BstMWI GCNNNNNNNGC 1 cut(s) 10
BstNI CCWGG 1 cut(s) 39
BstSCI CCNGG 1 cut(s) 37
BstV1I GCAGC 1 cut(s) 16
BstV2I GAAGAC 1 cut(s) 134
BsuRI GGCC 1 cut(s) 106
BtgZI GCGATG 1 cut(s) 210
Cac8I GCNNGC 1 cut(s) 222
CfoI GCGC 1 cut(s) 168
Cfr13I GGNCC 1 cut(s) 104
Csp6I GTAC 1 cut(s) 187
CviJI RGCY 5 cut(s) 68, 86, 106, 220, 224
CviKI_1 RGCY 5 cut(s) 68, 86, 106, 220, 224
CviQI GTAC 1 cut(s) 187
DdeI CTNAG 1 cut(s) 211
DpnI GATC 2 cut(s) 207, 265
DpnII GATC 2 cut(s) 205, 263
Eco57I CTGAAG 1 cut(s) 72
EcoRII CCWGG 1 cut(s) 37
FaiI YATR 2 cut(s) 47, 252
Fnu4HI GCNGC 4 cut(s) 5, 8, 11, 260
Fsp4HI GCNGC 4 cut(s) 5, 8, 11, 260
FspBI CTAG 2 cut(s) 221, 237
GlaI GCGC 1 cut(s) 167
GluI GCNGC 4 cut(s) 5, 8, 11, 260
GsuI CTGGAG 1 cut(s) 60
HaeII RGCGCY 1 cut(s) 169
HaeIII GGCC 1 cut(s) 106
HhaI GCGC 1 cut(s) 168
Hin6I GCGC 1 cut(s) 166
HinP1I GCGC 1 cut(s) 166
HinfI GANTC 3 cut(s) 79, 94, 128
Hpy188I TCNGA 4 cut(s) 78, 91, 127, 157
Hpy188III TCNNGA 1 cut(s) 146
HpyCH4III ACNGT 1 cut(s) 191
HpyCH4V TGCA 1 cut(s) 4
HpyF10VI GCNNNNNNNGC 1 cut(s) 10
HpyF3I CTNAG 1 cut(s) 211
HspAI GCGC 1 cut(s) 166
Kzo9I GATC 2 cut(s) 205, 263
LpnPI CCDG 5 cut(s) 24, 51, 68, 123, 159
Lsp1109I GCAGC 1 cut(s) 16
MaeI CTAG 2 cut(s) 221, 237
MalI GATC 2 cut(s) 207, 265
MboI GATC 2 cut(s) 205, 263
MboII GAAGA 3 cut(s) 29, 134, 258
MluCI AATT 1 cut(s) 159
MlyI GAGTC 2 cut(s) 88, 137
MnlI CCTC 3 cut(s) 35, 105, 108
MspA1I CMGCKG 1 cut(s) 7
MspR9I CCNGG 1 cut(s) 39
Mva1269I GAATGC 1 cut(s) 121
MvaI CCWGG 1 cut(s) 39
MwoI GCNNNNNNNGC 1 cut(s) 10
NdeII GATC 2 cut(s) 205, 263
NheI GCTAGC 1 cut(s) 220
NlaIV GGNNCC 1 cut(s) 105
PctI GAATGC 1 cut(s) 121
PfeI GAWTC 1 cut(s) 94
PkrI GCNGC 4 cut(s) 6, 9, 12, 261
PleI GAGTC 2 cut(s) 87, 136
PpsI GAGTC 2 cut(s) 87, 136
Psp6I CCWGG 1 cut(s) 37
PspGI CCWGG 1 cut(s) 37
PspN4I GGNNCC 1 cut(s) 105
PspPI GGNCC 1 cut(s) 104
RsaI GTAC 1 cut(s) 188
RsaNI GTAC 1 cut(s) 187
SatI GCNGC 4 cut(s) 5, 8, 11, 260
Sau3AI GATC 2 cut(s) 205, 263
Sau96I GGNCC 1 cut(s) 104
SchI GAGTC 2 cut(s) 88, 137
ScrFI CCNGG 1 cut(s) 39
SetI ASST 6 cut(s) 40, 46, 70, 142, 222, 226
Sse9I AATT 1 cut(s) 159
SsiI CCGC 2 cut(s) 7, 10
SspMI CTAG 2 cut(s) 221, 237
StyD4I CCNGG 1 cut(s) 37
TaaI ACNGT 1 cut(s) 191
TasI AATT 1 cut(s) 159
TatI WGTACW 1 cut(s) 186
TauI GCSGC 2 cut(s) 10, 13
TfiI GAWTC 1 cut(s) 94
TseI GCWGC 2 cut(s) 4, 259
TspDTI ATGAA 1 cut(s) 213
XspI CTAG 2 cut(s) 221, 237
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.