AT2G20210

No description available

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
8721325 .. 8725127
3803 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G20210.1

Sequence Viewer

Length: 1815 bp
ATGACGAAAGCTCCTTCTCTTGCGTTTCTCTGCATCCAATCCCTCAAAATTCAGCTTCTAGAAAGCGATAATCCAATTCCAGATTTATACGAGCTTCCATCGGAGTTACTTGATGGCATTGTCGCTCACTTGCCTGCTCTTGCTTTGCAGAAGTTTCAGACCAACATGCCGTTTCATTGCTTGGATAGTTATGAATCTGGAGATGATTGCTGCTTGATTACTGGGAGAAAACGTGCAAGAAATGATGTACTTGGTAGCTCTTGGAAGTTGTTGTTTAAGCTGCGGTGGCCTGATTTTGTTGACCGTGTGGAATCACCAGCTGATTGGCAACAGCTTTACTGGGAAAAGCATCTCCAAAATTGTGTTGATGAAGCAGCTGAGGTAGCTCTGCGTCCGACATTTAGTGGTCGGATTTGTTCCATTAATGTATCTGATAACATATTGAGATACATTTGCCATGAAGAGCACATCATGACTTGTCAAAATTGTGTCTGCAAGGAACTATCTTTTCATTTCCAAACTTTTGGACCATATCTTAGGTGTCTGAGGCTTCTGAATGTGCTATGCGTTACAGAAACTTCTGAGTTATTGAGGACAAGTAAATTGCGAAGTTTGGTTCTACGTTGGATCAGATCCGAGAAGCATGTTGAGCCCTTGTGCAAGCTCTTGATTCAGAGCCGAGAAACATTAACTTCGCTTGAACTTATTCACTGCAAGCTTTCTTTGAGTTCCATCAGTGCAATATGCACTTCTCTTCATGAAAAGGGTATCCACACAACTGGGATGCAACGTTTCTGTATAAAGACATCTAGCATTGAGATAGATCCACTTGCTGCGCCTTCCGCTTTCGTTTCATTCCTGATGTCGGTGAGGACCTTACATTCCTTACATTTTGGCGATAGCAACCTCGATAGATATTTTGCGAGGATGGTTTTCTCTACACTTCTTGATTCTTCTTCCAACCTTTCATCCCTTGACCTCTCTGAAAACAATATTTCAGGATGGCTTTCTACTTTTAGCTGCAAATCTGTTGTTGGTTCTCTGTCATCTGGAAAGTCTTTACAGTCCCTGTGCAAGCTCAACTTAAGGGGAAATGAACTTGACAGATACGATGCAGAGAATCTTGCACATGCTCTACTTCATATGCCTGGCTTGGAATCTCTTGACCTGAGCGGGAACCCCATTGAAGACAGTGGGATCAGAAGCTTAATATCTTACTTCACAAAGAATCCGGATTCTCGTTTAGCCGATCTGAATTTGGAGAACTGTGAGCTATCATGTTGTGGAGTTATTGAGTTTCTTGATACCCTGTCGATGCTGGAGAAACCTTTAAAGTTCCTGTCTGTTGCAGATAATGCCCTCGGAAGCGAGGTTGCAGAGGCTGTAGTAAACTCTTTCACAATCTCCATCGAGTCGCTCAATATTATGGGTATAGGACTAGGTCCTCTCGGGTTTCTTGCATTAGGCAGAAAACTTGAAAAAGTGTCGAAGAAGCTGCTGAGTATTAATATAAGCAAAAACCGTGGAGGACTAGAGACCGCTAGATTCCTGTCAAAGCTCATACCCTTGGCACCAAAACTCATCTCAATCGACGCATCCTACAATCTTATGCCACCTGAAGCCTTGCTCATGCTATGTGATTCCCTGAGAACTGCAAAAGGTGATCTCAAACGTCTTGACATGACTGGGAATAGTTGCATCAGCCACGAAGCTGACCATTCTTCTCTACTCCATGAATTTCAACACAACGGAGAACCCATCTTCGTTTTACCTTCATCCTCGGTTTCACATGTTCCTTACGATGATGACCCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

604

Amino Acids

67.22

Weight (kDa)

5.83

Isoelectric Point (pI)

45.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1570
AccBSI CCGCTC 1 cut(s) 1173
AccIII TCCGGA 1 cut(s) 1231
AciI CCGC 4 cut(s) 283, 843, 1173, 1539
AclI AACGTT 1 cut(s) 790
AclWI GGATC 4 cut(s) 627, 635, 818, 1205
AcsI RAATTY 3 cut(s) 48, 1255, 1736
AcuI CTGAAG 1 cut(s) 1638
AfaI GTAC 1 cut(s) 249
AfiI CCNNNNNNNGG 1 cut(s) 865
AflII CTTAAG 1 cut(s) 1084
AflIII ACRYGT 1 cut(s) 1789
AgsI TTSAA 4 cut(s) 701, 1187, 1478, 1742
AjnI CCWGG 1 cut(s) 1147
Alw21I GWGCWC 1 cut(s) 468
Alw26I GTCTC 1 cut(s) 1529
AlwI GGATC 4 cut(s) 627, 635, 818, 1205
AlwNI CAGNNNCTG 2 cut(s) 1069, 1382
Ama87I CYCGRG 1 cut(s) 1448
Aor13HI TCCGGA 1 cut(s) 1231
AoxI GGCC 1 cut(s) 287
ApeKI GCWGC 6 cut(s) 210, 280, 374, 833, 1020, 1495
ApoI RAATTY 3 cut(s) 48, 1255, 1736
AseI ATTAAT 2 cut(s) 423, 1506
Asp700I GAANNNNTTC 1 cut(s) 705
AspLEI GCGC 1 cut(s) 838
AspS9I GGNCC 3 cut(s) 527, 873, 1442
AsuHPI GGTGA 3 cut(s) 306, 880, 1673
AvaI CYCGRG 1 cut(s) 1448
AvaII GGWCC 3 cut(s) 527, 873, 1442
BanI GGYRCC 1 cut(s) 1570
BanII GRGCYC 1 cut(s) 654
BbsI GAAGAC 1 cut(s) 1194
Bbv12I GWGCWC 1 cut(s) 468
BbvCI CCTCAGC 1 cut(s) 378
BbvI GCAGC 6 cut(s) 197, 267, 386, 820, 1007, 1482
BccI CCATC 7 cut(s) 106, 107, 740, 922, 996, 1415, 1766
BceAI ACGGC 1 cut(s) 154
BcgI CGANNNNNNTGC 2 cut(s) 1477, 1511
BciT130I CCWGG 1 cut(s) 1149
BciVI GTATCC 1 cut(s) 779
BcoDI GTCTC 1 cut(s) 1529
BfaI CTAG 5 cut(s) 59, 810, 1439, 1532, 1542
BfmI CTRYAG 1 cut(s) 1383
BfrI CTTAAG 1 cut(s) 1084
BfuI GTATCC 1 cut(s) 779
BisI GCNGC 6 cut(s) 211, 281, 375, 834, 1021, 1496
BlsI GCNGC 6 cut(s) 212, 282, 376, 835, 1022, 1497
Bme1390I CCNGG 1 cut(s) 1149
Bme18I GGWCC 3 cut(s) 527, 873, 1442
BmeT110I CYCGRG 1 cut(s) 1448
BmgT120I GGNCC 3 cut(s) 527, 873, 1442
BmiI GGNNCC 2 cut(s) 1178, 1572
BmrFI CCNGG 1 cut(s) 1149
BmrI ACTGGG 4 cut(s) 231, 349, 789, 1695
BmsI GCATC 7 cut(s) 42, 358, 774, 1102, 1305, 1604, 1707
BmuI ACTGGG 4 cut(s) 231, 349, 789, 1695
BpiI GAAGAC 1 cut(s) 1194
BpmI CTGGAG 2 cut(s) 219, 1340
Bpu10I CCTNAGC 2 cut(s) 378, 1169
BsaI GGTCTC 1 cut(s) 1529
BsaJI CCNNGG 4 cut(s) 1360, 1522, 1566, 1779
BsaWI WCCGGW 1 cut(s) 1231
BsaXI ACNNNNNCTCC 3 cut(s) 25, 217, 247
Bsc4I CCNNNNNNNGG 1 cut(s) 865
Bse1I ACTGG 4 cut(s) 226, 344, 784, 1690
Bse3DI GCAATG 1 cut(s) 175
BseAI TCCGGA 1 cut(s) 1231
BseBI CCWGG 1 cut(s) 1149
BseDI CCNNGG 4 cut(s) 1360, 1522, 1566, 1779
BseGI GGATG 7 cut(s) 33, 789, 933, 968, 1007, 1595, 1775
BseLI CCNNNNNNNGG 1 cut(s) 865
BseMI GCAATG 1 cut(s) 175
BseMII CTCAG 6 cut(s) 369, 536, 573, 1160, 1490, 1637
BseNI ACTGG 4 cut(s) 226, 344, 784, 1690
BseXI GCAGC 6 cut(s) 197, 267, 386, 820, 1007, 1482
BshFI GGCC 1 cut(s) 289
BshNI GGYRCC 1 cut(s) 1570
BsiHKAI GWGCWC 1 cut(s) 468
BsiHKCI CYCGRG 1 cut(s) 1448
BsiSI CCGG 1 cut(s) 1232
BslFI GGGAC 1 cut(s) 1051
BslI CCNNNNNNNGG 1 cut(s) 865
BsmAI GTCTC 1 cut(s) 1529
BsmFI GGGAC 1 cut(s) 1051
BsnI GGCC 1 cut(s) 289
Bso31I GGTCTC 1 cut(s) 1529
BsoBI CYCGRG 1 cut(s) 1448
Bsp1286I GDGCHC 2 cut(s) 468, 654
Bsp13I TCCGGA 1 cut(s) 1231
Bsp143I GATC 6 cut(s) 627, 632, 823, 1197, 1249, 1663
BspACI CCGC 4 cut(s) 283, 843, 1173, 1539
BspANI GGCC 1 cut(s) 289
BspCNI CTCAG 6 cut(s) 370, 537, 574, 1161, 1491, 1638
BspEI TCCGGA 1 cut(s) 1231
BspHI TCATGA 2 cut(s) 471, 757
BspLI GGNNCC 2 cut(s) 1178, 1572
BspPI GGATC 4 cut(s) 627, 635, 818, 1205
BspQI GCTCTTC 1 cut(s) 456
BspT107I GGYRCC 1 cut(s) 1570
BspTI CTTAAG 1 cut(s) 1084
BspTNI GGTCTC 1 cut(s) 1529
BsrBI CCGCTC 1 cut(s) 1173
BsrDI GCAATG 1 cut(s) 175
BsrI ACTGG 4 cut(s) 226, 344, 784, 1690
BssECI CCNNGG 4 cut(s) 1360, 1522, 1566, 1779
BssMI GATC 6 cut(s) 627, 632, 823, 1197, 1249, 1663
BssT1I CCWWGG 1 cut(s) 1566
Bst2UI CCWGG 1 cut(s) 1149
Bst4CI ACNGT 5 cut(s) 305, 1065, 1193, 1268, 1523
Bst6I CTCTTC 2 cut(s) 456, 759
BstAFI CTTAAG 1 cut(s) 1084
BstAPI GCANNNNNTGC 1 cut(s) 1355
BstC8I GCNNGC 4 cut(s) 135, 662, 716, 1076
BstDEI CTNAG 7 cut(s) 378, 536, 545, 582, 1169, 1499, 1646
BstDSI CCRYGG 1 cut(s) 1522
BstF5I GGATG 7 cut(s) 33, 789, 933, 968, 1007, 1595, 1775
BstHHI GCGC 1 cut(s) 838
BstKTI GATC 6 cut(s) 630, 635, 826, 1200, 1252, 1666
BstMAI GTCTC 1 cut(s) 1529
BstMBI GATC 6 cut(s) 627, 632, 823, 1197, 1249, 1663
BstMWI GCNNNNNNNGC 5 cut(s) 286, 383, 649, 842, 1355
BstNI CCWGG 1 cut(s) 1149
BstNSI RCATGY 4 cut(s) 169, 647, 1133, 1793
BstSCI CCNGG 1 cut(s) 1147
BstSFI CTRYAG 1 cut(s) 1383
BstV1I GCAGC 6 cut(s) 197, 267, 386, 820, 1007, 1482
BstV2I GAAGAC 1 cut(s) 1194
BstX2I RGATCY 2 cut(s) 632, 823
BstXI CCANNNNNNTGG 3 cut(s) 324, 524, 779
BstYI RGATCY 2 cut(s) 632, 823
BsuI GTATCC 1 cut(s) 779
BsuRI GGCC 1 cut(s) 289
BtgI CCRYGG 1 cut(s) 1522
BtsCI GGATG 7 cut(s) 33, 789, 933, 968, 1007, 1595, 1775
BtsI GCAGTG 1 cut(s) 709
BtsIMutI CAGTG 3 cut(s) 709, 742, 1198
Cac8I GCNNGC 4 cut(s) 135, 662, 716, 1076
CaiI CAGNNNCTG 2 cut(s) 1069, 1382
CciI TCATGA 2 cut(s) 471, 757
CfoI GCGC 1 cut(s) 838
Cfr13I GGNCC 3 cut(s) 527, 873, 1442
CseI GACGC 2 cut(s) 380, 1601
Csp6I GTAC 1 cut(s) 248
CspCI CAANNNNNGTGG 2 cut(s) 1504, 1539
CviQI GTAC 1 cut(s) 248
DdeI CTNAG 7 cut(s) 378, 536, 545, 582, 1169, 1499, 1646
DpnI GATC 6 cut(s) 629, 634, 825, 1199, 1251, 1665
DpnII GATC 6 cut(s) 627, 632, 823, 1197, 1249, 1663
DraI TTTAAA 1 cut(s) 1332
Eam1104I CTCTTC 2 cut(s) 456, 759
EarI CTCTTC 2 cut(s) 456, 759
Eco130I CCWWGG 1 cut(s) 1566
Eco24I GRGCYC 1 cut(s) 654
Eco31I GGTCTC 1 cut(s) 1529
Eco47I GGWCC 3 cut(s) 527, 873, 1442
Eco57I CTGAAG 1 cut(s) 1638
Eco88I CYCGRG 1 cut(s) 1448
EcoO109I RGGNCCY 2 cut(s) 873, 1442
EcoRII CCWGG 1 cut(s) 1147
EcoT14I CCWWGG 1 cut(s) 1566
EcoT38I GRGCYC 1 cut(s) 654
ErhI CCWWGG 1 cut(s) 1566
FalI AAGNNNNNCTT 2 cut(s) 1067, 1099
FaqI GGGAC 1 cut(s) 1051
FauI CCCGC 1 cut(s) 1166
FauNDI CATATG 1 cut(s) 1143
Fnu4HI GCNGC 6 cut(s) 211, 281, 375, 834, 1021, 1496
FokI GGATG 7 cut(s) 20, 796, 940, 955, 1014, 1582, 1762
FriOI GRGCYC 1 cut(s) 654
Fsp4HI GCNGC 6 cut(s) 211, 281, 375, 834, 1021, 1496
FspBI CTAG 5 cut(s) 59, 810, 1439, 1532, 1542
GlaI GCGC 1 cut(s) 837
GluI GCNGC 6 cut(s) 211, 281, 375, 834, 1021, 1496
GsuI CTGGAG 2 cut(s) 219, 1340
HaeIII GGCC 1 cut(s) 289
HapII CCGG 1 cut(s) 1232
HgaI GACGC 2 cut(s) 380, 1601
HhaI GCGC 1 cut(s) 838
Hin6I GCGC 1 cut(s) 836
HinP1I GCGC 1 cut(s) 836
HincII GTYRAC 1 cut(s) 301
HindII GTYRAC 1 cut(s) 301
HindIII AAGCTT 2 cut(s) 716, 1204
HpaII CCGG 1 cut(s) 1232
HphI GGTGA 3 cut(s) 306, 880, 1673
Hpy166II GTNNAC 2 cut(s) 301, 1390
Hpy8I GTNNAC 2 cut(s) 301, 1390
Hpy99I CGWCG 1 cut(s) 1595
HpyAV CCTTC 3 cut(s) 24, 849, 1782
HpyCH4III ACNGT 5 cut(s) 305, 1065, 1193, 1268, 1523
HpyCH4IV ACGT 4 cut(s) 232, 622, 790, 1672
HpyF10VI GCNNNNNNNGC 5 cut(s) 286, 383, 649, 842, 1355
HpyF3I CTNAG 7 cut(s) 378, 536, 545, 582, 1169, 1499, 1646
HpySE526I ACGT 4 cut(s) 232, 622, 790, 1672
HspAI GCGC 1 cut(s) 836
Kpn2I TCCGGA 1 cut(s) 1231
Kzo9I GATC 6 cut(s) 627, 632, 823, 1197, 1249, 1663
LguI GCTCTTC 1 cut(s) 456
LmnI GCTCC 1 cut(s) 16
Lsp1109I GCAGC 6 cut(s) 197, 267, 386, 820, 1007, 1482
LweI GCATC 7 cut(s) 42, 358, 774, 1102, 1305, 1604, 1707
MaeI CTAG 5 cut(s) 59, 810, 1439, 1532, 1542
MaeII ACGT 4 cut(s) 232, 622, 790, 1672
MaeIII GTNAC 2 cut(s) 105, 568
MalI GATC 6 cut(s) 629, 634, 825, 1199, 1251, 1665
MbiI CCGCTC 1 cut(s) 1173
MboI GATC 6 cut(s) 627, 632, 823, 1197, 1249, 1663
MboII GAAGA 8 cut(s) 473, 746, 945, 948, 1199, 1501, 1713, 1753
MflI RGATCY 2 cut(s) 632, 823
MhlI GDGCHC 2 cut(s) 468, 654
MluCI AATT 7 cut(s) 48, 75, 358, 484, 602, 1255, 1736
MlyI GAGTC 1 cut(s) 1421
MmeI TCCRAC 4 cut(s) 389, 419, 605, 984
MroI TCCGGA 1 cut(s) 1231
MroXI GAANNNNTTC 1 cut(s) 705
MseI TTAA 7 cut(s) 276, 423, 689, 1085, 1208, 1331, 1506
MspA1I CMGCKG 2 cut(s) 320, 377
MspCI CTTAAG 1 cut(s) 1084
MspI CCGG 1 cut(s) 1232
MspR9I CCNGG 1 cut(s) 1149
MvaI CCWGG 1 cut(s) 1149
MwoI GCNNNNNNNGC 5 cut(s) 286, 383, 649, 842, 1355
NdeI CATATG 1 cut(s) 1143
NdeII GATC 6 cut(s) 627, 632, 823, 1197, 1249, 1663
NlaIV GGNNCC 2 cut(s) 1178, 1572
NmeAIII GCCGAG 1 cut(s) 704
NspI RCATGY 4 cut(s) 169, 647, 1133, 1793
PagI TCATGA 2 cut(s) 471, 757
PciI ACATGT 1 cut(s) 1789
PciSI GCTCTTC 1 cut(s) 456
PdmI GAANNNNTTC 1 cut(s) 705
PflFI GACNNNGTC 1 cut(s) 1440
PkrI GCNGC 6 cut(s) 212, 282, 376, 835, 1022, 1497
PleI GAGTC 1 cut(s) 1420
PpsI GAGTC 1 cut(s) 1420
PpuMI RGGWCCY 2 cut(s) 873, 1442
PscI ACATGT 1 cut(s) 1789
PshBI ATTAAT 2 cut(s) 423, 1506
Psp1406I AACGTT 1 cut(s) 790
Psp5II RGGWCCY 2 cut(s) 873, 1442
Psp6I CCWGG 1 cut(s) 1147
PspGI CCWGG 1 cut(s) 1147
PspN4I GGNNCC 2 cut(s) 1178, 1572
PspPI GGNCC 3 cut(s) 527, 873, 1442
PspPPI RGGWCCY 2 cut(s) 873, 1442
PstNI CAGNNNCTG 2 cut(s) 1069, 1382
PsuI RGATCY 2 cut(s) 632, 823
PsyI GACNNNGTC 1 cut(s) 1440
PvuII CAGCTG 2 cut(s) 320, 377
RsaI GTAC 1 cut(s) 249
RsaNI GTAC 1 cut(s) 248
SapI GCTCTTC 1 cut(s) 456
SaqAI TTAA 7 cut(s) 276, 423, 689, 1085, 1208, 1331, 1506
SatI GCNGC 6 cut(s) 211, 281, 375, 834, 1021, 1496
Sau3AI GATC 6 cut(s) 627, 632, 823, 1197, 1249, 1663
Sau96I GGNCC 3 cut(s) 527, 873, 1442
SchI GAGTC 1 cut(s) 1421
ScrFI CCNGG 1 cut(s) 1149
SduI GDGCHC 2 cut(s) 468, 654
SfaNI GCATC 7 cut(s) 42, 358, 774, 1102, 1305, 1604, 1707
SfcI CTRYAG 1 cut(s) 1383
SinI GGWCC 3 cut(s) 527, 873, 1442
SmlI CTYRAG 1 cut(s) 1084
SmoI CTYRAG 1 cut(s) 1084
Sse9I AATT 7 cut(s) 48, 75, 358, 484, 602, 1255, 1736
SsiI CCGC 4 cut(s) 283, 843, 1173, 1539
SspI AATATT 2 cut(s) 994, 1423
SspMI CTAG 5 cut(s) 59, 810, 1439, 1532, 1542
StyD4I CCNGG 1 cut(s) 1147
StyI CCWWGG 1 cut(s) 1566
TaaI ACNGT 5 cut(s) 305, 1065, 1193, 1268, 1523
TaiI ACGT 4 cut(s) 235, 625, 793, 1675
TaqI TCGA 5 cut(s) 909, 1313, 1410, 1487, 1590
TasI AATT 7 cut(s) 48, 75, 358, 484, 602, 1255, 1736
TatI WGTACW 1 cut(s) 247
Tru1I TTAA 7 cut(s) 276, 423, 689, 1085, 1208, 1331, 1506
Tru9I TTAA 7 cut(s) 276, 423, 689, 1085, 1208, 1331, 1506
TscAI CASTG 3 cut(s) 716, 742, 1198
TseI GCWGC 6 cut(s) 210, 280, 374, 833, 1020, 1495
TspGWI ACGGA 1 cut(s) 1764
TspRI CASTG 3 cut(s) 716, 742, 1198
Tth111I GACNNNGTC 1 cut(s) 1440
Vha464I CTTAAG 1 cut(s) 1084
VpaK11BI GGWCC 3 cut(s) 527, 873, 1442
VspI ATTAAT 2 cut(s) 423, 1506
XapI RAATTY 3 cut(s) 48, 1255, 1736
XbaI TCTAGA 1 cut(s) 58
XceI RCATGY 4 cut(s) 169, 647, 1133, 1793
XmnI GAANNNNTTC 1 cut(s) 705
XspI CTAG 5 cut(s) 59, 810, 1439, 1532, 1542
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.