No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G20210 AT2G20210 |
| fragaria_vesca | FvH4_2g19870 |
| malus_domestica | MD10G1171000.v1.1 |
| prunus_persica | Prupe.8G209500_v2.0.a1 Prupe.8G209500_v2.0.a1 Prupe.8G209500_v2.0.a1 Prupe.8G209500_v2.0.a1 Prupe.8G209500_v2.0.a1 Prupe.8G209500_v2.0.a1 Prupe.8G209500_v2.0.a1 Prupe.8G209500_v2.0.a1 Prupe.8G209500_v2.0.a1 Prupe.8G209500_v2.0.a1 |
| pyrus_communis | pycom10g14740 |
| rosa_chinensis | RchiOBHm_Chr6g0285561 |
| rosa_laevigata | RLG00000012627 |
| rosa_multiflora | Rmu_sc0012495.1_g000003 Rmu_sc0017770.1_g000003 |
| rosa_roxburghii | Rroxscaffold_7G00182940 |
| rosa_rugosa | Rorug06G0175500 |
| rosa_samantha | Rh6AG287100 Rh6BG288300 Rh6CG289500 Rh6DG282300 |
| rosa_wichuraiana | Rw6G024680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 947 |
| Acc36I | ACCTGC | 1 cut(s) | 120 |
| AccB1I | GGYRCC | 1 cut(s) | 1582 |
| AccI | GTMKAC | 1 cut(s) | 42 |
| AccII | CGCG | 2 cut(s) | 69, 237 |
| AccIII | TCCGGA | 1 cut(s) | 219 |
| AciI | CCGC | 8 cut(s) | 69, 168, 206, 237, 260, 286, 317, 1796 |
| AclWI | GGATC | 3 cut(s) | 624, 632, 1812 |
| AcoI | YGGCCR | 2 cut(s) | 290, 910 |
| AcsI | RAATTY | 7 cut(s) | 15, 251, 271, 333, 573, 738, 916 |
| AcuI | CTGAAG | 2 cut(s) | 533, 705 |
| AcyI | GRCGYC | 2 cut(s) | 409, 1746 |
| AdeI | CACNNNGTG | 1 cut(s) | 1034 |
| AfaI | GTAC | 1 cut(s) | 1431 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 146, 1400, 1827 |
| AhlI | ACTAGT | 1 cut(s) | 847 |
| AjnI | CCWGG | 2 cut(s) | 263, 422 |
| Alw21I | GWGCWC | 3 cut(s) | 702, 1253, 1804 |
| Alw26I | GTCTC | 2 cut(s) | 538, 1356 |
| Alw44I | GTGCAC | 2 cut(s) | 1249, 1800 |
| AlwI | GGATC | 3 cut(s) | 624, 632, 1812 |
| Aor13HI | TCCGGA | 1 cut(s) | 219 |
| AoxI | GGCC | 5 cut(s) | 261, 290, 910, 1036, 1129 |
| ApaLI | GTGCAC | 2 cut(s) | 1249, 1800 |
| ApeKI | GCWGC | 4 cut(s) | 25, 1380, 1550, 1664 |
| ApoI | RAATTY | 7 cut(s) | 15, 251, 271, 333, 573, 738, 916 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 185, 217 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 63 |
| AspLEI | GCGC | 1 cut(s) | 237 |
| AspS9I | GGNCC | 3 cut(s) | 109, 873, 1037 |
| AsuC2I | CCSGG | 1 cut(s) | 133 |
| AsuHPI | GGTGA | 3 cut(s) | 23, 497, 1020 |
| AvaII | GGWCC | 2 cut(s) | 109, 873 |
| BaeGI | GKGCMC | 3 cut(s) | 1253, 1585, 1804 |
| BalI | TGGCCA | 1 cut(s) | 292 |
| BanI | GGYRCC | 1 cut(s) | 1582 |
| BanII | GRGCYC | 1 cut(s) | 702 |
| BbsI | GAAGAC | 1 cut(s) | 1776 |
| Bbv12I | GWGCWC | 3 cut(s) | 702, 1253, 1804 |
| BbvI | GCAGC | 4 cut(s) | 12, 1392, 1537, 1651 |
| BceAI | ACGGC | 2 cut(s) | 379, 793 |
| BciT130I | CCWGG | 2 cut(s) | 265, 424 |
| BcnI | CCSGG | 1 cut(s) | 133 |
| BcoDI | GTCTC | 2 cut(s) | 538, 1356 |
| BcuI | ACTAGT | 1 cut(s) | 847 |
| BfaI | CTAG | 6 cut(s) | 299, 365, 848, 960, 1059, 1508 |
| BfmI | CTRYAG | 2 cut(s) | 161, 1844 |
| BfuAI | ACCTGC | 1 cut(s) | 120 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 909 |
| BisI | GCNGC | 6 cut(s) | 26, 70, 261, 1381, 1551, 1665 |
| BlsI | GCNGC | 6 cut(s) | 27, 71, 262, 1382, 1552, 1666 |
| BmcAI | AGTACT | 1 cut(s) | 1431 |
| Bme1390I | CCNGG | 3 cut(s) | 133, 265, 424 |
| Bme18I | GGWCC | 2 cut(s) | 109, 873 |
| BmgT120I | GGNCC | 3 cut(s) | 109, 873, 1037 |
| BmiI | GGNNCC | 2 cut(s) | 110, 1584 |
| BmrFI | CCNGG | 3 cut(s) | 133, 265, 424 |
| BmrI | ACTGGG | 1 cut(s) | 196 |
| BmsI | GCATC | 8 cut(s) | 109, 358, 358, 527, 1111, 1247, 1427, 1693 |
| BmuI | ACTGGG | 1 cut(s) | 196 |
| BoxI | GACNNNNGTC | 1 cut(s) | 850 |
| BpiI | GAAGAC | 1 cut(s) | 1776 |
| BpmI | CTGGAG | 1 cut(s) | 286 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1668 |
| BpuEI | CTTGAG | 3 cut(s) | 716, 1700, 1714 |
| BpuMI | CCSGG | 1 cut(s) | 133 |
| Bsa29I | ATCGAT | 1 cut(s) | 1816 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1835 |
| BsaHI | GRCGYC | 2 cut(s) | 409, 1746 |
| BsaJI | CCNNGG | 5 cut(s) | 104, 633, 907, 1375, 1534 |
| BsaWI | WCCGGW | 1 cut(s) | 219 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 146, 1400, 1827 |
| Bse1I | ACTGG | 3 cut(s) | 66, 191, 329 |
| Bse3DI | GCAATG | 2 cut(s) | 508, 1076 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1835 |
| BseAI | TCCGGA | 1 cut(s) | 219 |
| BseBI | CCWGG | 2 cut(s) | 265, 424 |
| BseCI | ATCGAT | 1 cut(s) | 1816 |
| BseDI | CCNNGG | 5 cut(s) | 104, 633, 907, 1375, 1534 |
| BseGI | GGATG | 6 cut(s) | 196, 214, 969, 1204, 1238, 1836 |
| BseJI | GATNNNNATC | 1 cut(s) | 1835 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 146, 1400, 1827 |
| BseMI | GCAATG | 2 cut(s) | 508, 1076 |
| BseMII | CTCAG | 3 cut(s) | 427, 533, 656 |
| BseNI | ACTGG | 3 cut(s) | 66, 191, 329 |
| BseSI | GKGCMC | 3 cut(s) | 1253, 1585, 1804 |
| BseXI | GCAGC | 4 cut(s) | 12, 1392, 1537, 1651 |
| BsgI | GTGCAG | 1 cut(s) | 588 |
| Bsh1236I | CGCG | 2 cut(s) | 69, 237 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1816 |
| BshFI | GGCC | 5 cut(s) | 263, 292, 912, 1038, 1131 |
| BshNI | GGYRCC | 1 cut(s) | 1582 |
| BshVI | ATCGAT | 1 cut(s) | 1816 |
| BsiEI | CGRYCG | 1 cut(s) | 1816 |
| BsiHKAI | GWGCWC | 3 cut(s) | 702, 1253, 1804 |
| BsiSI | CCGG | 3 cut(s) | 133, 220, 913 |
| BslFI | GGGAC | 1 cut(s) | 122 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 146, 1400, 1827 |
| BsmAI | GTCTC | 2 cut(s) | 538, 1356 |
| BsmFI | GGGAC | 1 cut(s) | 122 |
| BsnI | GGCC | 5 cut(s) | 263, 292, 912, 1038, 1131 |
| Bsp1286I | GDGCHC | 4 cut(s) | 702, 1253, 1585, 1804 |
| Bsp13I | TCCGGA | 1 cut(s) | 219 |
| Bsp143I | GATC | 7 cut(s) | 76, 624, 629, 1025, 1515, 1813, 1817 |
| Bsp19I | CCATGG | 1 cut(s) | 104 |
| BspACI | CCGC | 8 cut(s) | 69, 168, 206, 237, 260, 286, 317, 1796 |
| BspANI | GGCC | 5 cut(s) | 263, 292, 912, 1038, 1131 |
| BspCNI | CTCAG | 3 cut(s) | 426, 534, 657 |
| BspDI | ATCGAT | 1 cut(s) | 1816 |
| BspEI | TCCGGA | 1 cut(s) | 219 |
| BspFNI | CGCG | 2 cut(s) | 69, 237 |
| BspLI | GGNNCC | 2 cut(s) | 110, 1584 |
| BspMI | ACCTGC | 1 cut(s) | 120 |
| BspPI | GGATC | 3 cut(s) | 624, 632, 1812 |
| BspT107I | GGYRCC | 1 cut(s) | 1582 |
| BsrDI | GCAATG | 2 cut(s) | 508, 1076 |
| BsrI | ACTGG | 3 cut(s) | 66, 191, 329 |
| BssECI | CCNNGG | 5 cut(s) | 104, 633, 907, 1375, 1534 |
| BssMI | GATC | 7 cut(s) | 76, 624, 629, 1025, 1515, 1813, 1817 |
| BssNI | GRCGYC | 2 cut(s) | 409, 1746 |
| BssT1I | CCWWGG | 3 cut(s) | 104, 633, 907 |
| Bst2UI | CCWGG | 2 cut(s) | 265, 424 |
| Bst4CI | ACNGT | 3 cut(s) | 1535, 1600, 1845 |
| BstACI | GRCGYC | 2 cut(s) | 409, 1746 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1078 |
| BstC8I | GCNNGC | 3 cut(s) | 713, 1004, 1740 |
| BstDEI | CTNAG | 8 cut(s) | 413, 542, 617, 665, 1133, 1158, 1668, 1822 |
| BstDSI | CCRYGG | 2 cut(s) | 104, 1534 |
| BstF5I | GGATG | 6 cut(s) | 196, 214, 969, 1204, 1238, 1836 |
| BstFNI | CGCG | 2 cut(s) | 69, 237 |
| BstHHI | GCGC | 1 cut(s) | 237 |
| BstKTI | GATC | 7 cut(s) | 79, 627, 632, 1028, 1518, 1816, 1820 |
| BstMAI | GTCTC | 2 cut(s) | 538, 1356 |
| BstMBI | GATC | 7 cut(s) | 76, 624, 629, 1025, 1515, 1813, 1817 |
| BstMCI | CGRYCG | 1 cut(s) | 1816 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 325, 383, 786, 909, 1078, 1661 |
| BstNI | CCWGG | 2 cut(s) | 265, 424 |
| BstNSI | RCATGY | 1 cut(s) | 1156 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 850 |
| BstSCI | CCNGG | 3 cut(s) | 131, 263, 422 |
| BstSFI | CTRYAG | 2 cut(s) | 161, 1844 |
| BstSLI | GKGCMC | 3 cut(s) | 1253, 1585, 1804 |
| BstUI | CGCG | 2 cut(s) | 69, 237 |
| BstV1I | GCAGC | 4 cut(s) | 12, 1392, 1537, 1651 |
| BstV2I | GAAGAC | 1 cut(s) | 1776 |
| BstX2I | RGATCY | 1 cut(s) | 629 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 521, 1757 |
| BstYI | RGATCY | 1 cut(s) | 629 |
| Bsu15I | ATCGAT | 1 cut(s) | 1816 |
| BsuRI | GGCC | 5 cut(s) | 263, 292, 912, 1038, 1131 |
| BsuTUI | ATCGAT | 1 cut(s) | 1816 |
| BtgI | CCRYGG | 2 cut(s) | 104, 1534 |
| BtgZI | GCGATG | 2 cut(s) | 6, 87 |
| BtsCI | GGATG | 6 cut(s) | 196, 214, 969, 1204, 1238, 1836 |
| BtsI | GCAGTG | 3 cut(s) | 177, 389, 706 |
| BtsIMutI | CAGTG | 5 cut(s) | 177, 389, 421, 706, 1841 |
| BveI | ACCTGC | 1 cut(s) | 120 |
| Cac8I | GCNNGC | 3 cut(s) | 713, 1004, 1740 |
| CfoI | GCGC | 1 cut(s) | 237 |
| Cfr13I | GGNCC | 3 cut(s) | 109, 873, 1037 |
| ClaI | ATCGAT | 1 cut(s) | 1816 |
| CseI | GACGC | 3 cut(s) | 53, 417, 1754 |
| Csp6I | GTAC | 1 cut(s) | 1430 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1516, 1551 |
| CviAII | CATG | 2 cut(s) | 105, 1153 |
| CviQI | GTAC | 1 cut(s) | 1430 |
| DdeI | CTNAG | 8 cut(s) | 413, 542, 617, 665, 1133, 1158, 1668, 1822 |
| DpnI | GATC | 7 cut(s) | 78, 626, 631, 1027, 1517, 1815, 1819 |
| DpnII | GATC | 7 cut(s) | 76, 624, 629, 1025, 1515, 1813, 1817 |
| DraIII | CACNNNGTG | 1 cut(s) | 1034 |
| EaeI | YGGCCR | 2 cut(s) | 290, 910 |
| Ecl136II | GAGCTC | 1 cut(s) | 700 |
| Eco130I | CCWWGG | 3 cut(s) | 104, 633, 907 |
| Eco24I | GRGCYC | 1 cut(s) | 702 |
| Eco32I | GATATC | 1 cut(s) | 1575 |
| Eco47I | GGWCC | 2 cut(s) | 109, 873 |
| Eco53kI | GAGCTC | 1 cut(s) | 700 |
| Eco57I | CTGAAG | 2 cut(s) | 533, 705 |
| EcoICRI | GAGCTC | 1 cut(s) | 700 |
| EcoO109I | RGGNCCY | 2 cut(s) | 109, 873 |
| EcoRII | CCWGG | 2 cut(s) | 263, 422 |
| EcoRV | GATATC | 1 cut(s) | 1575 |
| EcoT14I | CCWWGG | 3 cut(s) | 104, 633, 907 |
| EcoT22I | ATGCAT | 1 cut(s) | 351 |
| EcoT38I | GRGCYC | 1 cut(s) | 702 |
| ErhI | CCWWGG | 3 cut(s) | 104, 633, 907 |
| FaeI | CATG | 2 cut(s) | 108, 1156 |
| FaqI | GGGAC | 1 cut(s) | 122 |
| FatI | CATG | 2 cut(s) | 104, 1152 |
| FauI | CCCGC | 1 cut(s) | 1789 |
| FblI | GTMKAC | 1 cut(s) | 42 |
| Fnu4HI | GCNGC | 6 cut(s) | 26, 70, 261, 1381, 1551, 1665 |
| FokI | GGATG | 6 cut(s) | 203, 221, 956, 1211, 1225, 1843 |
| FriOI | GRGCYC | 1 cut(s) | 702 |
| Fsp4HI | GCNGC | 6 cut(s) | 26, 70, 261, 1381, 1551, 1665 |
| FspBI | CTAG | 6 cut(s) | 299, 365, 848, 960, 1059, 1508 |
| GlaI | GCGC | 1 cut(s) | 236 |
| GluI | GCNGC | 6 cut(s) | 26, 70, 261, 1381, 1551, 1665 |
| GsuI | CTGGAG | 1 cut(s) | 286 |
| HaeIII | GGCC | 5 cut(s) | 263, 292, 912, 1038, 1131 |
| HapII | CCGG | 3 cut(s) | 133, 220, 913 |
| HgaI | GACGC | 3 cut(s) | 53, 417, 1754 |
| HhaI | GCGC | 1 cut(s) | 237 |
| Hin1I | GRCGYC | 2 cut(s) | 409, 1746 |
| Hin1II | CATG | 2 cut(s) | 108, 1156 |
| Hin6I | GCGC | 1 cut(s) | 235 |
| HinP1I | GCGC | 1 cut(s) | 235 |
| HindIII | AAGCTT | 2 cut(s) | 713, 787 |
| HinfI | GANTC | 7 cut(s) | 216, 427, 434, 1083, 1206, 1213, 1306 |
| HpaII | CCGG | 3 cut(s) | 133, 220, 913 |
| HphI | GGTGA | 3 cut(s) | 23, 497, 1020 |
| Hpy166II | GTNNAC | 6 cut(s) | 43, 1150, 1251, 1286, 1567, 1802 |
| Hpy188I | TCNGA | 9 cut(s) | 496, 552, 629, 666, 845, 898, 985, 1012, 1243 |
| Hpy188III | TCNNGA | 7 cut(s) | 220, 431, 756, 1210, 1472, 1679, 1688 |
| Hpy8I | GTNNAC | 6 cut(s) | 43, 1150, 1251, 1286, 1567, 1802 |
| Hpy99I | CGWCG | 1 cut(s) | 1748 |
| HpyAV | CCTTC | 6 cut(s) | 206, 234, 864, 1436, 1489, 1788 |
| HpyCH4III | ACNGT | 3 cut(s) | 1535, 1600, 1845 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 325, 383, 786, 909, 1078, 1661 |
| HpyF3I | CTNAG | 8 cut(s) | 413, 542, 617, 665, 1133, 1158, 1668, 1822 |
| Hsp92I | GRCGYC | 2 cut(s) | 409, 1746 |
| Hsp92II | CATG | 2 cut(s) | 108, 1156 |
| HspAI | GCGC | 1 cut(s) | 235 |
| Kpn2I | TCCGGA | 1 cut(s) | 219 |
| Kzo9I | GATC | 7 cut(s) | 76, 624, 629, 1025, 1515, 1813, 1817 |
| LmnI | GCTCC | 2 cut(s) | 97, 637 |
| Lsp1109I | GCAGC | 4 cut(s) | 12, 1392, 1537, 1651 |
| LweI | GCATC | 8 cut(s) | 109, 358, 358, 527, 1111, 1247, 1427, 1693 |
| MaeI | CTAG | 6 cut(s) | 299, 365, 848, 960, 1059, 1508 |
| MaeIII | GTNAC | 2 cut(s) | 1303, 1594 |
| MalI | GATC | 7 cut(s) | 78, 626, 631, 1027, 1517, 1815, 1819 |
| MboI | GATC | 7 cut(s) | 76, 624, 629, 1025, 1515, 1813, 1817 |
| MboII | GAAGA | 4 cut(s) | 344, 711, 948, 1776 |
| MflI | RGATCY | 1 cut(s) | 629 |
| MhlI | GDGCHC | 4 cut(s) | 702, 1253, 1585, 1804 |
| MlsI | TGGCCA | 1 cut(s) | 292 |
| MluNI | TGGCCA | 1 cut(s) | 292 |
| MlyI | GAGTC | 4 cut(s) | 210, 1092, 1222, 1300 |
| MmeI | TCCRAC | 4 cut(s) | 132, 227, 1143, 1254 |
| Mox20I | TGGCCA | 1 cut(s) | 292 |
| Mph1103I | ATGCAT | 1 cut(s) | 351 |
| MroI | TCCGGA | 1 cut(s) | 219 |
| MroXI | GAANNNNTTC | 1 cut(s) | 63 |
| MscI | TGGCCA | 1 cut(s) | 292 |
| MseI | TTAA | 5 cut(s) | 686, 887, 1094, 1268, 1659 |
| MslI | CAYNNNNRTG | 1 cut(s) | 645 |
| Msp20I | TGGCCA | 1 cut(s) | 292 |
| MspA1I | CMGCKG | 1 cut(s) | 319 |
| MspI | CCGG | 3 cut(s) | 133, 220, 913 |
| MspR9I | CCNGG | 3 cut(s) | 133, 265, 424 |
| MvaI | CCWGG | 2 cut(s) | 265, 424 |
| MvnI | CGCG | 2 cut(s) | 69, 237 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 325, 383, 786, 909, 1078, 1661 |
| NciI | CCSGG | 1 cut(s) | 133 |
| NcoI | CCATGG | 1 cut(s) | 104 |
| NdeII | GATC | 7 cut(s) | 76, 624, 629, 1025, 1515, 1813, 1817 |
| NlaIII | CATG | 2 cut(s) | 108, 1156 |
| NlaIV | GGNNCC | 2 cut(s) | 110, 1584 |
| NmeAIII | GCCGAG | 2 cut(s) | 403, 1356 |
| NmuCI | GTSAC | 1 cut(s) | 1303 |
| NsiI | ATGCAT | 1 cut(s) | 351 |
| NspI | RCATGY | 1 cut(s) | 1156 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1239 |
| PdmI | GAANNNNTTC | 1 cut(s) | 63 |
| PfeI | GAWTC | 3 cut(s) | 427, 434, 1206 |
| PkrI | GCNGC | 6 cut(s) | 27, 71, 262, 1382, 1552, 1666 |
| Ple19I | CGATCG | 1 cut(s) | 1816 |
| PleI | GAGTC | 4 cut(s) | 210, 1091, 1221, 1300 |
| PpsI | GAGTC | 4 cut(s) | 210, 1091, 1221, 1300 |
| PpuMI | RGGWCCY | 2 cut(s) | 109, 873 |
| PshAI | GACNNNNGTC | 1 cut(s) | 850 |
| PsiI | TTATAA | 1 cut(s) | 947 |
| Psp124BI | GAGCTC | 1 cut(s) | 702 |
| Psp5II | RGGWCCY | 2 cut(s) | 109, 873 |
| Psp6I | CCWGG | 2 cut(s) | 263, 422 |
| PspGI | CCWGG | 2 cut(s) | 263, 422 |
| PspN4I | GGNNCC | 2 cut(s) | 110, 1584 |
| PspPI | GGNCC | 3 cut(s) | 109, 873, 1037 |
| PspPPI | RGGWCCY | 2 cut(s) | 109, 873 |
| PsuI | RGATCY | 1 cut(s) | 629 |
| PvuI | CGATCG | 1 cut(s) | 1816 |
| RsaI | GTAC | 1 cut(s) | 1431 |
| RsaNI | GTAC | 1 cut(s) | 1430 |
| RseI | CAYNNNNRTG | 1 cut(s) | 645 |
| SacI | GAGCTC | 1 cut(s) | 702 |
| SaqAI | TTAA | 5 cut(s) | 686, 887, 1094, 1268, 1659 |
| SatI | GCNGC | 6 cut(s) | 26, 70, 261, 1381, 1551, 1665 |
| Sau3AI | GATC | 7 cut(s) | 76, 624, 629, 1025, 1515, 1813, 1817 |
| Sau96I | GGNCC | 3 cut(s) | 109, 873, 1037 |
| ScaI | AGTACT | 1 cut(s) | 1431 |
| SchI | GAGTC | 4 cut(s) | 210, 1092, 1222, 1300 |
| ScrFI | CCNGG | 3 cut(s) | 133, 265, 424 |
| SduI | GDGCHC | 4 cut(s) | 702, 1253, 1585, 1804 |
| SfaNI | GCATC | 8 cut(s) | 109, 358, 358, 527, 1111, 1247, 1427, 1693 |
| SfcI | CTRYAG | 2 cut(s) | 161, 1844 |
| SinI | GGWCC | 2 cut(s) | 109, 873 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 645 |
| SmlI | CTYRAG | 3 cut(s) | 695, 1679, 1693 |
| SmoI | CTYRAG | 3 cut(s) | 695, 1679, 1693 |
| SpeI | ACTAGT | 1 cut(s) | 847 |
| SsiI | CCGC | 8 cut(s) | 69, 168, 206, 237, 260, 286, 317, 1796 |
| SspMI | CTAG | 6 cut(s) | 299, 365, 848, 960, 1059, 1508 |
| SstI | GAGCTC | 1 cut(s) | 702 |
| StyD4I | CCNGG | 3 cut(s) | 131, 263, 422 |
| StyI | CCWWGG | 3 cut(s) | 104, 633, 907 |
| TaaI | ACNGT | 3 cut(s) | 1535, 1600, 1845 |
| TaqI | TCGA | 3 cut(s) | 117, 1233, 1816 |
| TatI | WGTACW | 1 cut(s) | 1429 |
| TauI | GCSGC | 2 cut(s) | 72, 263 |
| TfiI | GAWTC | 3 cut(s) | 427, 434, 1206 |
| Tru1I | TTAA | 5 cut(s) | 686, 887, 1094, 1268, 1659 |
| Tru9I | TTAA | 5 cut(s) | 686, 887, 1094, 1268, 1659 |
| TscAI | CASTG | 5 cut(s) | 177, 396, 421, 713, 1848 |
| TseFI | GTSAC | 1 cut(s) | 1303 |
| TseI | GCWGC | 4 cut(s) | 25, 1380, 1550, 1664 |
| Tsp45I | GTSAC | 1 cut(s) | 1303 |
| TspDTI | ATGAA | 5 cut(s) | 72, 225, 750, 873, 1762 |
| TspGWI | ACGGA | 2 cut(s) | 132, 1212 |
| TspRI | CASTG | 5 cut(s) | 177, 396, 421, 713, 1848 |
| VneI | GTGCAC | 2 cut(s) | 1249, 1800 |
| VpaK11BI | GGWCC | 2 cut(s) | 109, 873 |
| XapI | RAATTY | 7 cut(s) | 15, 251, 271, 333, 573, 738, 916 |
| XceI | RCATGY | 1 cut(s) | 1156 |
| XmiI | GTMKAC | 1 cut(s) | 42 |
| XmnI | GAANNNNTTC | 1 cut(s) | 63 |
| XspI | CTAG | 6 cut(s) | 299, 365, 848, 960, 1059, 1508 |
| ZrmI | AGTACT | 1 cut(s) | 1431 |
| Zsp2I | ATGCAT | 1 cut(s) | 351 |