Prupe.8G209500_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
19453969 .. 19460678
6710 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G209500.9

Sequence Viewer

Length: 1863 bp
ATGGGCGAAAGTGAAATTCCATCTCTGGTTTCCTTGTGCATAGAGGCAGTAAAAAACGAGCTGGTTCGCGGCGATGATCTTTTACCGATTATCAAGGAGCTTCCAGGGAACTTGGTTGATATTCTAGCTTCGAGACTGCCTCCATTGGCTTTAGAAAAGTTGCAGACCGCAGTGCCTTTTGACGATCGAGATGACCATGATTTCGCCGATGAAGGCCTTAGAAATGGTAGAAAGCGTGGAAGGTCTGGAAGAATTGAGTTTTTTGTGAGTTGGAATTTCAGTACGGCATGGAAAAATTTAGTTAAGTCGCGGTGGCCTAATCTTGGCAATCAGATTGAACCAATTGACTGGCAACAGATGTATTGGGAAACGCATCTTCAAAATTGCTTAGATGAAGTGGCAGAGATAGCTTCGCTTCCCTCATTTGATGGGCGCCTTGGTGAAATCGGGATTTCAGACTCTATATTGAAATTGATAGGCTTTGAGGGTTGCATGGATACTTCAACTTGTGATTATTCCAAACTATATCACCATTGCCAACAATTTGGTTATTATGCCAGATGCCTGAGACTTCAAAATGTTCTTTGTAGTGCAGAAATTTCTCATTTATTGAGGAACAGCCTATTGCAGAGCTTGGAACTAAGGTGGATCAGATCCAAGGAGCATATTGATGGACTATGCAAACTTCTGAACCAGAACAGTGAAAGTTTAACATCACTTGAGTTCATTCACTGCAAGCTTTCTTCAGATTCTATCAATGCAATTTGTAGTTCCCTACCCACAAAGAATGTGCAAACACATGGGATAAAAAACTTCTCAATCAACACATCAAACTTTCTTGAAACAAACCCTGTTTCCTTACCCCTCGGACTTGTGTCATTTTTGTCATCAGGAAGGTCCTTGTATTCTTTAAAACTCTCTGACAACCACCTTGGCCGCAATTTTGCAAAATTGGTTTTTGGTACTCTTCTCAATGCTTCGTCTAGTCTATCCATCCTTGACCTTTCAGATAACAATATATCAGGCTGGCTTTCTGAACTCTATTGGAGATCACCAAGTGGTCCCCCAACACCTTTGGGAATTGGAAAGTCCTTCCAATCATTACGAGTGCTCAATTTAAGGGGAAATAATCTAAACAAAGATGATGCAGATGGTCTTAGATACGCTCTCGTTCATATACCTAATTTGGAGGTCCTAGATATGAGTGATAATCCTATTGAGGATGCTGGAATCAGGAGTTTAATTCCATATTTTGTCGAAGCTTCCGAAAAATGCTTTCCCTTTGCTGATTTAATGTTGGAGAACTGTGAGCTTTCCTGTCATGGAGTGACTTACCTCATAGACACCCTCTCAACCCTACAGAGACCATTGAAGTCTCTATCTGTTGCTGATAATGACCTTGGCAGTTCACTATTGTGTAGCCAAGTGGCAGCAGCTTTGGGAAAACTTTTGTCCACATCAATTCAAATACTCAATGTTGAAGGTATTGGATTGGGTTCATCTGGTTTTCAGGAACTACAAGATGGCATAACTAAGGAGTTGAAGCTAGTCAAGGTCAACATAAGCAAAAATCGTGGAGGAATTGAAACTGCAAACTTTTTGTCAAAGCTCATATCAATGGCTCCAGAACTCGTTACAGTCGATGCTGCATATAATCTTATGCCTTTAAAATCCTTGACCACCATATGCTCGGCCCTTAAAGCTGCTAAAGGAAATATTGAGCGTCTGGACTTGAGGGGAAATATTTGGGATTATCAACCAGGTTATGCTTCTATGCATGCCGACATACAATGTAATGGAAGGCCTGTTTTGATTCTTTCGTCGTCACCAACTCCAGATGCACCCTATGACGATGATCCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

621

Amino Acids

68.42

Weight (kDa)

5.25

Isoelectric Point (pI)

48.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 432
AccII CGCG 2 cut(s) 69, 310
AciI CCGC 4 cut(s) 69, 168, 310, 937
AclWI GGATC 3 cut(s) 648, 656, 1850
AcoI YGGCCR 1 cut(s) 934
AcsI RAATTY 4 cut(s) 15, 274, 295, 597
AcuI CTGAAG 1 cut(s) 729
AcyI GRCGYC 1 cut(s) 433
AdeI CACNNNGTG 1 cut(s) 1058
AfaI GTAC 2 cut(s) 283, 964
AfiI CCNNNNNNNGG 1 cut(s) 323
AjnI CCWGG 2 cut(s) 103, 1759
AleI CACNNNNGTG 1 cut(s) 1414
Alw21I GWGCWC 1 cut(s) 1113
Alw26I GTCTC 4 cut(s) 127, 562, 1357, 1380
AlwI GGATC 3 cut(s) 648, 656, 1850
AoxI GGCC 5 cut(s) 214, 314, 934, 1692, 1802
ApeKI GCWGC 4 cut(s) 1430, 1433, 1646, 1703
ApoI RAATTY 4 cut(s) 15, 274, 295, 597
ArsI GACNNNNNNTTYG 4 cut(s) 185, 217, 1586, 1618
AspLEI GCGC 1 cut(s) 435
AspS9I GGNCC 4 cut(s) 897, 1061, 1192, 1693
AsuHPI GGTGA 4 cut(s) 452, 521, 1044, 1818
AvaII GGWCC 3 cut(s) 897, 1061, 1192
BanI GGYRCC 1 cut(s) 432
Bbv12I GWGCWC 1 cut(s) 1113
BbvI GCAGC 4 cut(s) 1442, 1445, 1633, 1690
BccI CCATC 6 cut(s) 28, 422, 665, 1001, 1145, 1517
BceAI ACGGC 1 cut(s) 300
BciT130I CCWGG 2 cut(s) 105, 1761
BciVI GTATCC 1 cut(s) 490
BcoDI GTCTC 4 cut(s) 127, 562, 1357, 1380
BfaI CTAG 4 cut(s) 125, 984, 1196, 1547
BfmI CTRYAG 1 cut(s) 1358
BfoI RGCGCY 1 cut(s) 436
BfuI GTATCC 1 cut(s) 490
BisI GCNGC 6 cut(s) 70, 937, 1431, 1434, 1647, 1704
BlsI GCNGC 6 cut(s) 71, 938, 1432, 1435, 1648, 1705
Bme1390I CCNGG 2 cut(s) 105, 1761
Bme18I GGWCC 3 cut(s) 897, 1061, 1192
BmgT120I GGNCC 4 cut(s) 897, 1061, 1192, 1693
BmiI GGNNCC 3 cut(s) 434, 1063, 1623
BmrFI CCNGG 2 cut(s) 105, 1761
BmsI GCATC 6 cut(s) 382, 551, 1135, 1213, 1633, 1828
BoxI GACNNNNGTC 1 cut(s) 874
BplI GAGNNNNNCTC 2 cut(s) 124, 156
BpmI CTGGAG 2 cut(s) 1608, 1818
BpuEI CTTGAG 2 cut(s) 740, 1753
BsaHI GRCGYC 1 cut(s) 433
BsaI GGTCTC 1 cut(s) 1357
BsaJI CCNNGG 6 cut(s) 104, 436, 657, 865, 931, 1399
Bsc4I CCNNNNNNNGG 1 cut(s) 323
Bse1I ACTGG 1 cut(s) 353
Bse3DI GCAATG 1 cut(s) 532
BseBI CCWGG 2 cut(s) 105, 1761
BseDI CCNNGG 6 cut(s) 104, 436, 657, 865, 931, 1399
BseGI GGATG 2 cut(s) 993, 1228
BseLI CCNNNNNNNGG 1 cut(s) 323
BseMI GCAATG 1 cut(s) 532
BseMII CTCAG 1 cut(s) 557
BseNI ACTGG 1 cut(s) 353
BseXI GCAGC 4 cut(s) 1442, 1445, 1633, 1690
BsgI GTGCAG 1 cut(s) 612
Bsh1236I CGCG 2 cut(s) 69, 310
Bsh1285I CGRYCG 1 cut(s) 187
BshFI GGCC 5 cut(s) 216, 316, 936, 1694, 1804
BshNI GGYRCC 1 cut(s) 432
BsiEI CGRYCG 1 cut(s) 187
BsiHKAI GWGCWC 1 cut(s) 1113
BslFI GGGAC 1 cut(s) 1047
BslI CCNNNNNNNGG 1 cut(s) 323
BsmAI GTCTC 4 cut(s) 127, 562, 1357, 1380
BsmFI GGGAC 1 cut(s) 1047
BsnI GGCC 5 cut(s) 216, 316, 936, 1694, 1804
Bso31I GGTCTC 1 cut(s) 1357
Bsp1286I GDGCHC 1 cut(s) 1113
Bsp143I GATC 6 cut(s) 76, 184, 648, 653, 1049, 1855
BspACI CCGC 4 cut(s) 69, 168, 310, 937
BspANI GGCC 5 cut(s) 216, 316, 936, 1694, 1804
BspCNI CTCAG 1 cut(s) 558
BspFNI CGCG 2 cut(s) 69, 310
BspLI GGNNCC 3 cut(s) 434, 1063, 1623
BspPI GGATC 3 cut(s) 648, 656, 1850
BspT107I GGYRCC 1 cut(s) 432
BspTNI GGTCTC 1 cut(s) 1357
BsrDI GCAATG 1 cut(s) 532
BsrI ACTGG 1 cut(s) 353
BssECI CCNNGG 6 cut(s) 104, 436, 657, 865, 931, 1399
BssMI GATC 6 cut(s) 76, 184, 648, 653, 1049, 1855
BssNI GRCGYC 1 cut(s) 433
BssT1I CCWWGG 4 cut(s) 436, 657, 931, 1399
Bst2UI CCWGG 2 cut(s) 105, 1761
Bst4CI ACNGT 3 cut(s) 701, 1307, 1639
Bst6I CTCTTC 1 cut(s) 972
BstACI GRCGYC 1 cut(s) 433
BstC8I GCNNGC 3 cut(s) 737, 1028, 1779
BstDEI CTNAG 6 cut(s) 218, 388, 566, 641, 1157, 1533
BstF5I GGATG 2 cut(s) 993, 1228
BstFNI CGCG 2 cut(s) 69, 310
BstH2I RGCGCY 1 cut(s) 436
BstHHI GCGC 1 cut(s) 435
BstKTI GATC 6 cut(s) 79, 187, 651, 656, 1052, 1858
BstMAI GTCTC 4 cut(s) 127, 562, 1357, 1380
BstMBI GATC 6 cut(s) 76, 184, 648, 653, 1049, 1855
BstMCI CGRYCG 1 cut(s) 187
BstMWI GCNNNNNNNGC 2 cut(s) 407, 1700
BstNI CCWGG 2 cut(s) 105, 1761
BstNSI RCATGY 1 cut(s) 1781
BstPAI GACNNNNGTC 1 cut(s) 874
BstSCI CCNGG 2 cut(s) 103, 1759
BstSFI CTRYAG 1 cut(s) 1358
BstUI CGCG 2 cut(s) 69, 310
BstV1I GCAGC 4 cut(s) 1442, 1445, 1633, 1690
BstX2I RGATCY 1 cut(s) 653
BstXI CCANNNNNNTGG 2 cut(s) 348, 545
BstYI RGATCY 1 cut(s) 653
BsuI GTATCC 1 cut(s) 490
BsuRI GGCC 5 cut(s) 216, 316, 936, 1694, 1804
BtgZI GCGATG 1 cut(s) 87
BtsCI GGATG 2 cut(s) 993, 1228
BtsI GCAGTG 2 cut(s) 177, 730
BtsIMutI CAGTG 3 cut(s) 177, 706, 730
Cac8I GCNNGC 3 cut(s) 737, 1028, 1779
CfoI GCGC 1 cut(s) 435
Cfr13I GGNCC 4 cut(s) 897, 1061, 1192, 1693
CseI GACGC 1 cut(s) 1712
CsiI ACCWGGT 1 cut(s) 1759
Csp6I GTAC 2 cut(s) 282, 963
CspCI CAANNNNNGTGG 2 cut(s) 1555, 1590
CviAII CATG 6 cut(s) 197, 288, 493, 800, 1322, 1778
CviQI GTAC 2 cut(s) 282, 963
DdeI CTNAG 6 cut(s) 218, 388, 566, 641, 1157, 1533
DinI GGCGCC 1 cut(s) 434
DpnI GATC 6 cut(s) 78, 186, 650, 655, 1051, 1857
DpnII GATC 6 cut(s) 76, 184, 648, 653, 1049, 1855
DraI TTTAAA 2 cut(s) 912, 1668
DraIII CACNNNGTG 1 cut(s) 1058
EaeI YGGCCR 1 cut(s) 934
Eam1104I CTCTTC 1 cut(s) 972
EarI CTCTTC 1 cut(s) 972
Eco130I CCWWGG 4 cut(s) 436, 657, 931, 1399
Eco147I AGGCCT 2 cut(s) 216, 1804
Eco31I GGTCTC 1 cut(s) 1357
Eco47I GGWCC 3 cut(s) 897, 1061, 1192
Eco57I CTGAAG 1 cut(s) 729
EcoO109I RGGNCCY 2 cut(s) 897, 1192
EcoRII CCWGG 2 cut(s) 103, 1759
EcoT14I CCWWGG 4 cut(s) 436, 657, 931, 1399
EcoT22I ATGCAT 1 cut(s) 1779
EgeI GGCGCC 1 cut(s) 434
EheI GGCGCC 1 cut(s) 434
ErhI CCWWGG 4 cut(s) 436, 657, 931, 1399
FaeI CATG 6 cut(s) 200, 291, 496, 803, 1325, 1781
FaqI GGGAC 1 cut(s) 1047
FatI CATG 6 cut(s) 196, 287, 492, 799, 1321, 1777
FauNDI CATATG 1 cut(s) 1685
Fnu4HI GCNGC 6 cut(s) 70, 937, 1431, 1434, 1647, 1704
FokI GGATG 2 cut(s) 980, 1235
Fsp4HI GCNGC 6 cut(s) 70, 937, 1431, 1434, 1647, 1704
FspBI CTAG 4 cut(s) 125, 984, 1196, 1547
GlaI GCGC 1 cut(s) 434
GluI GCNGC 6 cut(s) 70, 937, 1431, 1434, 1647, 1704
GsuI CTGGAG 2 cut(s) 1608, 1818
HaeII RGCGCY 1 cut(s) 436
HaeIII GGCC 5 cut(s) 216, 316, 936, 1694, 1804
HgaI GACGC 1 cut(s) 1712
HhaI GCGC 1 cut(s) 435
Hin1I GRCGYC 1 cut(s) 433
Hin1II CATG 6 cut(s) 200, 291, 496, 803, 1325, 1781
Hin6I GCGC 1 cut(s) 433
HinP1I GCGC 1 cut(s) 433
HincII GTYRAC 1 cut(s) 1558
HindII GTYRAC 1 cut(s) 1558
HindIII AAGCTT 2 cut(s) 737, 1260
HinfI GANTC 4 cut(s) 458, 749, 1230, 1813
HphI GGTGA 4 cut(s) 452, 521, 1044, 1818
Hpy166II GTNNAC 3 cut(s) 1409, 1455, 1558
Hpy8I GTNNAC 3 cut(s) 1409, 1455, 1558
Hpy99I CGWCG 1 cut(s) 1825
HpyAV CCTTC 6 cut(s) 206, 234, 888, 1102, 1475, 1794
HpyCH4III ACNGT 3 cut(s) 701, 1307, 1639
HpyF10VI GCNNNNNNNGC 2 cut(s) 407, 1700
HpyF3I CTNAG 6 cut(s) 218, 388, 566, 641, 1157, 1533
Hsp92I GRCGYC 1 cut(s) 433
Hsp92II CATG 6 cut(s) 200, 291, 496, 803, 1325, 1781
HspAI GCGC 1 cut(s) 433
KasI GGCGCC 1 cut(s) 432
Kzo9I GATC 6 cut(s) 76, 184, 648, 653, 1049, 1855
LmnI GCTCC 3 cut(s) 97, 661, 1627
Lsp1109I GCAGC 4 cut(s) 1442, 1445, 1633, 1690
LweI GCATC 6 cut(s) 382, 551, 1135, 1213, 1633, 1828
MabI ACCWGGT 1 cut(s) 1759
MaeI CTAG 4 cut(s) 125, 984, 1196, 1547
MaeIII GTNAC 3 cut(s) 1327, 1633, 1824
MalI GATC 6 cut(s) 78, 186, 650, 655, 1051, 1857
MboI GATC 6 cut(s) 76, 184, 648, 653, 1049, 1855
MboII GAAGA 4 cut(s) 261, 368, 735, 959
MfeI CAATTG 1 cut(s) 342
MflI RGATCY 1 cut(s) 653
MhlI GDGCHC 1 cut(s) 1113
Mly113I GGCGCC 1 cut(s) 433
MlyI GAGTC 1 cut(s) 452
MmeI TCCRAC 2 cut(s) 251, 1278
Mph1103I ATGCAT 1 cut(s) 1779
MseI TTAA 8 cut(s) 303, 710, 911, 1118, 1241, 1292, 1667, 1698
MslI CAYNNNNRTG 3 cut(s) 669, 1414, 1616
MspR9I CCNGG 2 cut(s) 105, 1761
MunI CAATTG 1 cut(s) 342
MvaI CCWGG 2 cut(s) 105, 1761
MvnI CGCG 2 cut(s) 69, 310
MwoI GCNNNNNNNGC 2 cut(s) 407, 1700
NarI GGCGCC 1 cut(s) 433
NdeI CATATG 1 cut(s) 1685
NdeII GATC 6 cut(s) 76, 184, 648, 653, 1049, 1855
NlaIII CATG 6 cut(s) 200, 291, 496, 803, 1325, 1781
NlaIV GGNNCC 3 cut(s) 434, 1063, 1623
NmeAIII GCCGAG 1 cut(s) 1670
NmuCI GTSAC 2 cut(s) 1327, 1824
NsiI ATGCAT 1 cut(s) 1779
NspI RCATGY 1 cut(s) 1781
OliI CACNNNNGTG 1 cut(s) 1414
PaeI GCATGC 1 cut(s) 1781
PceI AGGCCT 2 cut(s) 216, 1804
PcsI WCGNNNNNNNCGW 2 cut(s) 1263, 1638
PfeI GAWTC 3 cut(s) 749, 1230, 1813
PkrI GCNGC 6 cut(s) 71, 938, 1432, 1435, 1648, 1705
Ple19I CGATCG 1 cut(s) 187
PleI GAGTC 1 cut(s) 452
PluTI GGCGCC 1 cut(s) 436
PpsI GAGTC 1 cut(s) 452
PpuMI RGGWCCY 2 cut(s) 897, 1192
PshAI GACNNNNGTC 1 cut(s) 874
Psp5II RGGWCCY 2 cut(s) 897, 1192
Psp6I CCWGG 2 cut(s) 103, 1759
PspGI CCWGG 2 cut(s) 103, 1759
PspN4I GGNNCC 3 cut(s) 434, 1063, 1623
PspPI GGNCC 4 cut(s) 897, 1061, 1192, 1693
PspPPI RGGWCCY 2 cut(s) 897, 1192
PsuI RGATCY 1 cut(s) 653
PvuI CGATCG 1 cut(s) 187
RsaI GTAC 2 cut(s) 283, 964
RsaNI GTAC 2 cut(s) 282, 963
RseI CAYNNNNRTG 3 cut(s) 669, 1414, 1616
SaqAI TTAA 8 cut(s) 303, 710, 911, 1118, 1241, 1292, 1667, 1698
SatI GCNGC 6 cut(s) 70, 937, 1431, 1434, 1647, 1704
Sau3AI GATC 6 cut(s) 76, 184, 648, 653, 1049, 1855
Sau96I GGNCC 4 cut(s) 897, 1061, 1192, 1693
SchI GAGTC 1 cut(s) 452
ScrFI CCNGG 2 cut(s) 105, 1761
SduI GDGCHC 1 cut(s) 1113
SexAI ACCWGGT 1 cut(s) 1759
SfaNI GCATC 6 cut(s) 382, 551, 1135, 1213, 1633, 1828
SfcI CTRYAG 1 cut(s) 1358
SfoI GGCGCC 1 cut(s) 434
SinI GGWCC 3 cut(s) 897, 1061, 1192
SmiMI CAYNNNNRTG 3 cut(s) 669, 1414, 1616
SmlI CTYRAG 2 cut(s) 719, 1732
SmoI CTYRAG 2 cut(s) 719, 1732
SphI GCATGC 1 cut(s) 1781
SseBI AGGCCT 2 cut(s) 216, 1804
SsiI CCGC 4 cut(s) 69, 168, 310, 937
SspDI GGCGCC 1 cut(s) 432
SspI AATATT 2 cut(s) 1717, 1744
SspMI CTAG 4 cut(s) 125, 984, 1196, 1547
StuI AGGCCT 2 cut(s) 216, 1804
StyD4I CCNGG 2 cut(s) 103, 1759
StyI CCWWGG 4 cut(s) 436, 657, 931, 1399
TaaI ACNGT 3 cut(s) 701, 1307, 1639
TaqI TCGA 4 cut(s) 131, 187, 1257, 1641
TauI GCSGC 2 cut(s) 72, 939
TfiI GAWTC 3 cut(s) 749, 1230, 1813
Tru1I TTAA 8 cut(s) 303, 710, 911, 1118, 1241, 1292, 1667, 1698
Tru9I TTAA 8 cut(s) 303, 710, 911, 1118, 1241, 1292, 1667, 1698
TscAI CASTG 3 cut(s) 177, 706, 737
TseFI GTSAC 2 cut(s) 1327, 1824
TseI GCWGC 4 cut(s) 1430, 1433, 1646, 1703
Tsp45I GTSAC 2 cut(s) 1327, 1824
TspDTI ATGAA 5 cut(s) 225, 408, 715, 1163, 1488
TspGWI ACGGA 1 cut(s) 1848
TspRI CASTG 3 cut(s) 177, 706, 737
VpaK11BI GGWCC 3 cut(s) 897, 1061, 1192
XapI RAATTY 4 cut(s) 15, 274, 295, 597
XceI RCATGY 1 cut(s) 1781
XspI CTAG 4 cut(s) 125, 984, 1196, 1547
Zsp2I ATGCAT 1 cut(s) 1779
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.