Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007341

Physical Location & Seq

Genomic Coordinates Reverse (-)

10933005 .. 10934604

Gene Structure 1600 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G25680.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1371 bp

ATGGAGTCTCAGTCTCAGAGAGGTCAACACGAAACCCCGAAACGTTCTAGGTTCACCGGAATGTTCCATAAACTGAAAACGAATCTTGTTTTCCGGTCGAAGCTAGCCGAAATAAACGGTGCAATGGGTGATCTTGGTACTTACATACCAATCGTCCTCGCTTTAACTCTAGCCAAGGATTTGGATTTAGGCACAACACTGATATTCACCGGCATATACAACGCGATAACCGGAGCAGTTTACGGTGTCCCCATGCCGGTTCAACCGATGAAATCGATAGCAGCCGTGGCGATTTCGTCTACCGCGGAAGATTTCGGTATACCGGAGATTATGGCTGCCGGAATATGTACCGGAGGGATCTTGTTCGTGTTGGGGATCTCTGGTTTGATGCAGCTTGTGTTCAATATAATCCCTTTATCGGTTGTTAGAGGGATTCAGTTGTCACAAGGCTTAGCTTTTGCCATGTCTGCGGTTAAGTATATAAGGAAAGAGCAGAATTTTTCGAAGTCAAAGAGTGTTGGTGATAGGCCATGGTTAGGGCTTGATGGTTTGGTTTTGGCTTTGGTTTGTGTTCTGTTCATAGTTCTTGTGAATGGAGATGGTGAAGAAGAAGAGGAAGAGGAAGAAGGAGATGGTTCGAGAGGAAGAGGAAGATGGGGTTCGGTGAGGAAGGTTATAGCTAACGTGCCATCTGCTCTGTTGATATTCTTGTTGGGTGTTGTTTTGGCATTTATAAGGAAGCCGAGTATTGTACATGACATCAAGTTTGGACCGTCAAAGATGAAGATTGTGAGAATAAGCCGAAAAGCATGGAGAAACGGGTTTTTGAAAGGGACGGTCCCGCAGTTACCTCTTTCTGTTCTTAATTCTGTTGTGGCTGTGTGTAAGCTGTCGTATGATCTGTTCCCCGAGAAGGAGTTCTCGGCTGCATCGGTTTCCATGACTGTTGGGCTGATGAATATGGTGGGATGTTGGTTTGGAGCAATGCCTACTTGTCATGGAGCTGGTGGTTTAGCCGGGCAGTATAAGTTTGGTGGGAGGAGTGGTGGGTGTGTGGCACTGTTGGGAGTAGCTAAACTGGTGCTAGGGTTGGTCTTGGGAGGTTCATTGGTGGGTATATTGGAGAAGTTTCCGGTTGGTGTGCTCGGGGCATTGCTACTATTTGCAGGGGTAGAGCTTGCAATGGCGGCTAGAGATATGAATACAAAGGGAGATGCATTTGTAATGCTTATGTGCACATCAGTCTCTTTGGGATCAAATGCTGCCATAGGCTTTGTTGCTGGTGATCTTTTGTATGTGGTTTTGTGGATGCGGAACTACGGGCGAGCGAAGCCGAGCAGCCTTCCCCCGCAATCCGGTGAACATGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005773 GO:0006810 GO:0006811 GO:0006820 GO:0008150 GO:0008509 GO:0015075 GO:0015098 GO:0015103 GO:0015318 GO:0015689 GO:0015698 GO:0016020 GO:0022857 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0034220 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098656

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MFS_MOT1

Protein Analysis

456

Amino Acids

48.39

Weight (kDa)

9.3

Isoelectric Point (pI)

34.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFS_MOT1	PF16983	36 - 152	1.3e-25	Molybdate transporter of MFS superfamily
MFS_MOT1	PF16983	275 - 393	3.1e-34	Molybdate transporter of MFS superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007341)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25680
fragaria_vesca	FvH4_2g30230
malus_domestica	MD08G1135400.v1.1
prunus_persica	Prupe.1G465500_v2.0.a1
pyrus_communis	pycom08g11440
rosa_chinensis	RchiOBHm_Chr4g0397011 RchiOBHm_Chr6g0312651
rosa_laevigata	RLG00000009458 RLG00000009459 RLG00000010307
rosa_multiflora	Rmu_sc0002859.1_g000003 Rmu_sc0002963.1_g000005 Rmu_ssc0000412.1_g000007
rosa_roxburghii	Rroxscaffold_5G00342030
rosa_rugosa	Rorug03G0345500 Rorug06G0398100
rosa_samantha	Rh4AG076100 Rh4BG072600 Rh4CG080800 Rh4DG070100 Rh6AG515400 Rh6BG526700 Rh6DG517700
rosa_wichuraiana	Rw4G006110 Rw6G044780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	734
AccI	GTMKAC	2 cut(s)	299, 319
AccII	CGCG	2 cut(s)	224, 305
AciI	CCGC	7 cut(s)	303, 305, 470, 842, 1187, 1312, 1349
AclI	AACGTT	1 cut(s)	43
AclWI	GGATC	3 cut(s)	365, 383, 1261
AcsI	RAATTY	1 cut(s)	496
AfaI	GTAC	3 cut(s)	139, 349, 753
AfiI	CCNNNNNNNGG	5 cut(s)	256, 418, 536, 913, 1355
AgsI	TTSAA	3 cut(s)	263, 403, 829
AluBI	AGCT	8 cut(s)	103, 394, 455, 680, 889, 1004, 1073, 1177
AluI	AGCT	8 cut(s)	103, 394, 455, 680, 889, 1004, 1073, 1177
Alw21I	GWGCWC	2 cut(s)	1146, 1238
Alw26I	GTCTC	3 cut(s)	12, 18, 1249
Alw44I	GTGCAC	1 cut(s)	1234
AlwI	GGATC	3 cut(s)	365, 383, 1261
Ama87I	CYCGRG	2 cut(s)	908, 1145
AoxI	GGCC	1 cut(s)	527
ApaLI	GTGCAC	1 cut(s)	1234
ApeKI	GCWGC	6 cut(s)	281, 335, 391, 926, 1262, 1338
ApoI	RAATTY	1 cut(s)	496
ArsI	GACNNNNNNTTYG	2 cut(s)	749, 781
Asp700I	GAANNNNTTC	1 cut(s)	917
AspS9I	GGNCC	2 cut(s)	770, 838
AsuC2I	CCSGG	1 cut(s)	1018
AsuHPI	GGTGA	8 cut(s)	46, 140, 199, 533, 614, 676, 1295, 1370
AsuII	TTCGAA	1 cut(s)	503
AsuNHI	GCTAGC	1 cut(s)	103
AvaI	CYCGRG	2 cut(s)	908, 1145
AvaII	GGWCC	2 cut(s)	770, 838
BaeGI	GKGCMC	1 cut(s)	1238
Bbv12I	GWGCWC	2 cut(s)	1146, 1238
BbvI	GCAGC	6 cut(s)	293, 322, 403, 913, 1249, 1350
BccI	CCATC	5 cut(s)	539, 593, 626, 648, 697
BceAI	ACGGC	1 cut(s)	269
BcnI	CCSGG	1 cut(s)	1018
BcoDI	GTCTC	3 cut(s)	12, 18, 1249
BfaI	CTAG	5 cut(s)	48, 104, 170, 1085, 1191
BisI	GCNGC	7 cut(s)	282, 336, 392, 927, 1188, 1263, 1339
BlpI	GCTNAGC	1 cut(s)	451
BlsI	GCNGC	7 cut(s)	283, 337, 393, 928, 1189, 1264, 1340
Bme1390I	CCNGG	1 cut(s)	1018
Bme18I	GGWCC	2 cut(s)	770, 838
BmeT110I	CYCGRG	2 cut(s)	908, 1145
BmgT120I	GGNCC	2 cut(s)	770, 838
BmiI	GGNNCC	1 cut(s)	840
BmrFI	CCNGG	1 cut(s)	1018
BmsI	GCATC	4 cut(s)	378, 938, 1204, 1299
BmtI	GCTAGC	1 cut(s)	107
Bpu1102I	GCTNAGC	1 cut(s)	451
Bpu14I	TTCGAA	1 cut(s)	503
BpuMI	CCSGG	1 cut(s)	1018
Bsa29I	ATCGAT	1 cut(s)	275
BsaJI	CCNNGG	4 cut(s)	174, 285, 303, 530
BsaWI	WCCGGW	7 cut(s)	56, 93, 230, 322, 350, 1132, 1355
BsaXI	ACNNNNNCTCC	3 cut(s)	26, 1030, 1060
Bsc4I	CCNNNNNNNGG	5 cut(s)	256, 418, 536, 913, 1355
Bse118I	RCCGGY	2 cut(s)	209, 256
Bse1I	ACTGG	1 cut(s)	1083
Bse3DI	GCAATG	4 cut(s)	129, 990, 1151, 1188
BseCI	ATCGAT	1 cut(s)	275
BseDI	CCNNGG	4 cut(s)	174, 285, 303, 530
BseGI	GGATG	2 cut(s)	974, 1314
BseLI	CCNNNNNNNGG	5 cut(s)	256, 418, 536, 913, 1355
BseMI	GCAATG	4 cut(s)	129, 990, 1151, 1188
BseMII	CTCAG	2 cut(s)	23, 29
BseNI	ACTGG	1 cut(s)	1083
BseRI	GAGGAG	1 cut(s)	1054
BseSI	GKGCMC	1 cut(s)	1238
BseXI	GCAGC	6 cut(s)	293, 322, 403, 913, 1249, 1350
Bsh1236I	CGCG	2 cut(s)	224, 305
Bsh1285I	CGRYCG	1 cut(s)	98
BshFI	GGCC	1 cut(s)	529
BshVI	ATCGAT	1 cut(s)	275
BsiEI	CGRYCG	1 cut(s)	98
BsiHKAI	GWGCWC	2 cut(s)	1146, 1238
BsiHKCI	CYCGRG	2 cut(s)	908, 1145
BslFI	GGGAC	3 cut(s)	233, 824, 847
BslI	CCNNNNNNNGG	5 cut(s)	256, 418, 536, 913, 1355
BsmAI	GTCTC	3 cut(s)	12, 18, 1249
BsmFI	GGGAC	3 cut(s)	233, 824, 847
BsnI	GGCC	1 cut(s)	529
BsoBI	CYCGRG	2 cut(s)	908, 1145
Bsp119I	TTCGAA	1 cut(s)	503
Bsp1286I	GDGCHC	2 cut(s)	1146, 1238
Bsp1407I	TGTACA	1 cut(s)	751
Bsp143I	GATC	6 cut(s)	130, 357, 375, 898, 1253, 1285
Bsp1720I	GCTNAGC	1 cut(s)	451
Bsp19I	CCATGG	1 cut(s)	530
BspACI	CCGC	7 cut(s)	303, 305, 470, 842, 1187, 1312, 1349
BspANI	GGCC	1 cut(s)	529
BspCNI	CTCAG	2 cut(s)	22, 28
BspDI	ATCGAT	1 cut(s)	275
BspFNI	CGCG	2 cut(s)	224, 305
BspLI	GGNNCC	1 cut(s)	840
BspOI	GCTAGC	1 cut(s)	107
BspPI	GGATC	3 cut(s)	365, 383, 1261
BspT104I	TTCGAA	1 cut(s)	503
BsrDI	GCAATG	4 cut(s)	129, 990, 1151, 1188
BsrFI	RCCGGY	2 cut(s)	209, 256
BsrGI	TGTACA	1 cut(s)	751
BsrI	ACTGG	1 cut(s)	1083
BssAI	RCCGGY	2 cut(s)	209, 256
BssECI	CCNNGG	4 cut(s)	174, 285, 303, 530
BssMI	GATC	6 cut(s)	130, 357, 375, 898, 1253, 1285
BssNAI	GTATAC	1 cut(s)	320
BssT1I	CCWWGG	2 cut(s)	174, 530
Bst1107I	GTATAC	1 cut(s)	320
Bst4CI	ACNGT	6 cut(s)	119, 245, 774, 838, 946, 1062
Bst6I	CTCTTC	3 cut(s)	606, 612, 640
BstAUI	TGTACA	1 cut(s)	751
BstBI	TTCGAA	1 cut(s)	503
BstC8I	GCNNGC	3 cut(s)	105, 1179, 1326
BstDEI	CTNAG	3 cut(s)	9, 15, 451
BstDSI	CCRYGG	3 cut(s)	285, 303, 530
BstF5I	GGATG	2 cut(s)	974, 1314
BstFNI	CGCG	2 cut(s)	224, 305
BstKTI	GATC	6 cut(s)	133, 360, 378, 901, 1256, 1288
BstMAI	GTCTC	3 cut(s)	12, 18, 1249
BstMBI	GATC	6 cut(s)	130, 357, 375, 898, 1253, 1285
BstMCI	CGRYCG	1 cut(s)	98
BstMWI	GCNNNNNNNGC	4 cut(s)	287, 467, 1187, 1330
BstNSI	RCATGY	1 cut(s)	1367
BstSCI	CCNGG	1 cut(s)	1016
BstSLI	GKGCMC	1 cut(s)	1238
BstUI	CGCG	2 cut(s)	224, 305
BstV1I	GCAGC	6 cut(s)	293, 322, 403, 913, 1249, 1350
BstX2I	RGATCY	2 cut(s)	357, 375
BstXI	CCANNNNNNTGG	1 cut(s)	181
BstYI	RGATCY	2 cut(s)	357, 375
BstZ17I	GTATAC	1 cut(s)	320
Bsu15I	ATCGAT	1 cut(s)	275
BsuRI	GGCC	1 cut(s)	529
BsuTUI	ATCGAT	1 cut(s)	275
BtgI	CCRYGG	3 cut(s)	285, 303, 530
BtsCI	GGATG	2 cut(s)	974, 1314
BtsIMutI	CAGTG	2 cut(s)	197, 1058
Cac8I	GCNNGC	3 cut(s)	105, 1179, 1326
Cfr10I	RCCGGY	2 cut(s)	209, 256
Cfr13I	GGNCC	2 cut(s)	770, 838
Cfr42I	CCGCGG	1 cut(s)	306
ClaI	ATCGAT	1 cut(s)	275
Csp6I	GTAC	3 cut(s)	138, 348, 752
CviAII	CATG	8 cut(s)	253, 463, 531, 755, 810, 940, 998, 1364
CviQI	GTAC	3 cut(s)	138, 348, 752
DdeI	CTNAG	3 cut(s)	9, 15, 451
DpnI	GATC	6 cut(s)	132, 359, 377, 900, 1255, 1287
DpnII	GATC	6 cut(s)	130, 357, 375, 898, 1253, 1285
Eam1104I	CTCTTC	3 cut(s)	606, 612, 640
EarI	CTCTTC	3 cut(s)	606, 612, 640
Eco130I	CCWWGG	2 cut(s)	174, 530
Eco47I	GGWCC	2 cut(s)	770, 838
Eco88I	CYCGRG	2 cut(s)	908, 1145
EcoT14I	CCWWGG	2 cut(s)	174, 530
EcoT22I	ATGCAT	1 cut(s)	1219
ErhI	CCWWGG	2 cut(s)	174, 530
FaeI	CATG	8 cut(s)	256, 466, 534, 758, 813, 943, 1001, 1367
FaqI	GGGAC	3 cut(s)	233, 824, 847
FatI	CATG	8 cut(s)	252, 462, 530, 754, 809, 939, 997, 1363
FauI	CCCGC	2 cut(s)	849, 1356
FblI	GTMKAC	2 cut(s)	299, 319
Fnu4HI	GCNGC	7 cut(s)	282, 336, 392, 927, 1188, 1263, 1339
FokI	GGATG	2 cut(s)	981, 1321
Fsp4HI	GCNGC	7 cut(s)	282, 336, 392, 927, 1188, 1263, 1339
FspBI	CTAG	5 cut(s)	48, 104, 170, 1085, 1191
GluI	GCNGC	7 cut(s)	282, 336, 392, 927, 1188, 1263, 1339
HaeIII	GGCC	1 cut(s)	529
Hin1II	CATG	8 cut(s)	256, 466, 534, 758, 813, 943, 1001, 1367
HincII	GTYRAC	1 cut(s)	26
HindII	GTYRAC	1 cut(s)	26
HinfI	GANTC	3 cut(s)	5, 82, 433
HphI	GGTGA	8 cut(s)	46, 140, 199, 533, 614, 676, 1295, 1370
Hpy166II	GTNNAC	7 cut(s)	26, 54, 241, 300, 320, 1236, 1361
Hpy188I	TCNGA	1 cut(s)	18
Hpy188III	TCNNGA	1 cut(s)	639
Hpy8I	GTNNAC	7 cut(s)	26, 54, 241, 300, 320, 1236, 1361
HpyAV	CCTTC	4 cut(s)	620, 664, 907, 1352
HpyCH4III	ACNGT	6 cut(s)	119, 245, 774, 838, 946, 1062
HpyCH4IV	ACGT	2 cut(s)	43, 684
HpyCH4V	TGCA	7 cut(s)	122, 391, 929, 1166, 1181, 1217, 1236
HpyF10VI	GCNNNNNNNGC	4 cut(s)	287, 467, 1187, 1330
HpyF3I	CTNAG	3 cut(s)	9, 15, 451
HpySE526I	ACGT	2 cut(s)	43, 684
Hsp92II	CATG	8 cut(s)	256, 466, 534, 758, 813, 943, 1001, 1367
KspI	CCGCGG	1 cut(s)	306
Kzo9I	GATC	6 cut(s)	130, 357, 375, 898, 1253, 1285
LmnI	GCTCC	3 cut(s)	233, 980, 1001
Lsp1109I	GCAGC	6 cut(s)	293, 322, 403, 913, 1249, 1350
LweI	GCATC	4 cut(s)	378, 938, 1204, 1299
MaeI	CTAG	5 cut(s)	48, 104, 170, 1085, 1191
MaeII	ACGT	2 cut(s)	43, 684
MaeIII	GTNAC	2 cut(s)	441, 846
MalI	GATC	6 cut(s)	132, 359, 377, 900, 1255, 1287
MboI	GATC	6 cut(s)	130, 357, 375, 898, 1253, 1285
MboII	GAAGA	9 cut(s)	320, 617, 620, 623, 629, 635, 657, 663, 796
MflI	RGATCY	2 cut(s)	357, 375
MhlI	GDGCHC	2 cut(s)	1146, 1238
MluCI	AATT	2 cut(s)	496, 865
MlyI	GAGTC	1 cut(s)	14
Mph1103I	ATGCAT	1 cut(s)	1219
MroXI	GAANNNNTTC	1 cut(s)	917
MseI	TTAA	3 cut(s)	164, 474, 864
MslI	CAYNNNNRTG	1 cut(s)	59
MspA1I	CMGCKG	1 cut(s)	305
MspR9I	CCNGG	1 cut(s)	1018
MvnI	CGCG	2 cut(s)	224, 305
MwoI	GCNNNNNNNGC	4 cut(s)	287, 467, 1187, 1330
NciI	CCSGG	1 cut(s)	1018
NcoI	CCATGG	1 cut(s)	530
NdeII	GATC	6 cut(s)	130, 357, 375, 898, 1253, 1285
NheI	GCTAGC	1 cut(s)	103
NlaIII	CATG	8 cut(s)	256, 466, 534, 758, 813, 943, 1001, 1367
NlaIV	GGNNCC	1 cut(s)	840
NmeAIII	GCCGAG	3 cut(s)	768, 902, 1359
NmuCI	GTSAC	1 cut(s)	441
NsiI	ATGCAT	1 cut(s)	1219
NspI	RCATGY	1 cut(s)	1367
NspV	TTCGAA	1 cut(s)	503
PdmI	GAANNNNTTC	1 cut(s)	917
PfeI	GAWTC	2 cut(s)	82, 433
PkrI	GCNGC	7 cut(s)	283, 337, 393, 928, 1189, 1264, 1340
PleI	GAGTC	1 cut(s)	13
PpsI	GAGTC	1 cut(s)	13
PsiI	TTATAA	1 cut(s)	734
Psp1406I	AACGTT	1 cut(s)	43
PspN4I	GGNNCC	1 cut(s)	840
PspPI	GGNCC	2 cut(s)	770, 838
PsrI	GAACNNNNNNTAC	2 cut(s)	887, 919
PsuI	RGATCY	2 cut(s)	357, 375
RsaI	GTAC	3 cut(s)	139, 349, 753
RsaNI	GTAC	3 cut(s)	138, 348, 752
RseI	CAYNNNNRTG	1 cut(s)	59
SacII	CCGCGG	1 cut(s)	306
SaqAI	TTAA	3 cut(s)	164, 474, 864
SatI	GCNGC	7 cut(s)	282, 336, 392, 927, 1188, 1263, 1339
Sau3AI	GATC	6 cut(s)	130, 357, 375, 898, 1253, 1285
Sau96I	GGNCC	2 cut(s)	770, 838
SchI	GAGTC	1 cut(s)	14
ScrFI	CCNGG	1 cut(s)	1018
SduI	GDGCHC	2 cut(s)	1146, 1238
SfaNI	GCATC	4 cut(s)	378, 938, 1204, 1299
Sfr303I	CCGCGG	1 cut(s)	306
SfuI	TTCGAA	1 cut(s)	503
SgrBI	CCGCGG	1 cut(s)	306
SinI	GGWCC	2 cut(s)	770, 838
SmiMI	CAYNNNNRTG	1 cut(s)	59
Sse9I	AATT	2 cut(s)	496, 865
SsiI	CCGC	7 cut(s)	303, 305, 470, 842, 1187, 1312, 1349
SspMI	CTAG	5 cut(s)	48, 104, 170, 1085, 1191
StyD4I	CCNGG	1 cut(s)	1016
StyI	CCWWGG	2 cut(s)	174, 530
TaaI	ACNGT	6 cut(s)	119, 245, 774, 838, 946, 1062
TaiI	ACGT	2 cut(s)	46, 687
TaqI	TCGA	4 cut(s)	98, 275, 503, 638
TasI	AATT	2 cut(s)	496, 865
TatI	WGTACW	1 cut(s)	751
TauI	GCSGC	1 cut(s)	1190
TfiI	GAWTC	2 cut(s)	82, 433
Tru1I	TTAA	3 cut(s)	164, 474, 864
Tru9I	TTAA	3 cut(s)	164, 474, 864
TscAI	CASTG	2 cut(s)	204, 1065
TseFI	GTSAC	1 cut(s)	441
TseI	GCWGC	6 cut(s)	281, 335, 391, 926, 1262, 1338
Tsp45I	GTSAC	1 cut(s)	441
TspDTI	ATGAA	6 cut(s)	284, 568, 797, 971, 1095, 1214
TspRI	CASTG	2 cut(s)	204, 1065
VneI	GTGCAC	1 cut(s)	1234
VpaK11BI	GGWCC	2 cut(s)	770, 838
XapI	RAATTY	1 cut(s)	496
XceI	RCATGY	1 cut(s)	1367
XmiI	GTMKAC	2 cut(s)	299, 319
XmnI	GAANNNNTTC	1 cut(s)	917
XspI	CTAG	5 cut(s)	48, 104, 170, 1085, 1191
Zsp2I	ATGCAT	1 cut(s)	1219

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.