Rw6G044780

Molybdate transporter

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Forward (+)
67902531 .. 67904158
1628 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G044780.1

Sequence Viewer

Length: 1440 bp
ATGGACATGGAGTCCCAAAACCATCAAATCCCTCCAACCCAAAACCCTCCTCATCCCATTGCCGAGTCATCGCCACAACCCAGTTTTCCAGCCAAACTTGCCCACCAGCTGAAATTCAATCTCATTTTCCGGTCCAAATGGGCCGAGTTGAACGGTGCAATGGGCGACTTAGGCACCTACATCCCAATCGTAGTGGCCTTAACACTAGCCAGAGACTTGAACTTGGGCACCACCTTGATCTTCACCGGAATCTACAACATCATCACCGGAGCCATCTACGGCGTTCCCATGCCGGTCCAACCTATGAAGGCCATTGCCGCCACAGCCCTGGCCAACCCAGATTTCGGCAACCCCGAAATCATGGCCGCCGGAATCCTAACCGGTAGCACCCTCATCGTTTTGGGTGCCACCGGTTTGATGCAACTGGTCTATAAGTTGATCCCTTTGTGTGTGGTCAGGGGAGTTCAACTGGCACAGGGATTGTCATTTGCGTTAACCGCGGTCAAGTACATTAAGAAGGTGCAAAACTTGCCCAAATCCAAAGCCATGGGGGAGAGGCACTGGTTTGGGTTGGATGGTTTGGTGTTGGCTATTGTTTGTCTTTGTTTCATAGTCATTGTTAATGGCGCAGGTGAGGAATATCATCCAGTGAGGGAAGGTGAAGTTGAGGTTGAAGAAGAAAGACCTAGCAGAAAAAAGAGGTGGAGGAAAATCATAGCTTCACTCCCTTCGGCTTTTTTAATTTTTGTGTTGGGTGTGATTCTGGCTTTTATAAGAAAGCCAAAAGTTGTGCATGATATTAAATTCGGGCCATCTCCTATGGAGGTTGTGAAGATTAGTAGGCATGCATGGAAAGATGGGTTCATCAAAGGGACAATTCCACAACTGCCCCTGTCAATATTGAACTCAGTGATTGCTGTGTGCAAATTGTCCTCTGATCTTTTCCCAGATAAAGATTTCTCTCCCACATCAATTTCGATCACGGTTGGGCTGATGAATGTGGTGGGTAGTTGGTTCGGAGCCATGCCTAGTTGTCACGGGGCCGGGGGGTTGGCCGGCCAGTACAAGTTTGGGGGGAGGAGTGGGGGGTGTGTGGCACTACTAGGGTCAGCCAAATTGGTGTTGGGTTTGGCTTTAGGGACTTCTTTGGTGACCATTTTGAACCAATTTCCAGTTGGGGTTTTGGGGGTGTTGCTCTTGTTTGCTGGGATTGAACTGGCTATGTGTGCTAGGGACATGCATACTAAAGAAGAGTCCTTTGTGATGCTTATTTGCACTGCTGTTTCACTAGTGGGTTCGAGTGCAGCACTAGGATTTGTGGTGGGGATGGGTGTGTATGTTCTACTTTGGCTGAGAAAGTTGGGCTGCAAAGACAAACCTAATTGGATGATATGGAAGCATGGTCGAACCATAGTAGAAAATTATTATCACAACCCATGA

Protein Analysis

479

Amino Acids

51.71

Weight (kDa)

9.28

Isoelectric Point (pI)

31.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_MOT1 PF16983 48 - 163 7.5e-27 Molybdate transporter of MFS superfamily
MFS_MOT1 PF16983 288 - 406 1.5e-35 Molybdate transporter of MFS superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 773
AarI CACCTGC 1 cut(s) 620
Acc36I ACCTGC 1 cut(s) 620
AccB1I GGYRCC 3 cut(s) 173, 227, 404
AccII CGCG 1 cut(s) 500
AciI CCGC 4 cut(s) 318, 366, 498, 500
AclWI GGATC 1 cut(s) 433
AcoI YGGCCR 4 cut(s) 330, 363, 1053, 1057
AcsI RAATTY 2 cut(s) 113, 803
AfaI GTAC 2 cut(s) 509, 1064
AfiI CCNNNNNNNGG 1 cut(s) 344
AgeI ACCGGT 2 cut(s) 380, 410
AgsI TTSAA 8 cut(s) 118, 151, 220, 467, 674, 904, 1162, 1214
AhdI GACNNNNNGTC 1 cut(s) 10
AhlI ACTAGT 1 cut(s) 1288
AjnI CCWGG 1 cut(s) 327
AjuI GAANNNNNNNTTGG 2 cut(s) 326, 358
AluBI AGCT 2 cut(s) 109, 719
AluI AGCT 2 cut(s) 109, 719
Alw26I GTCTC 1 cut(s) 207
AlwI GGATC 1 cut(s) 433
AoxI GGCC 9 cut(s) 141, 195, 309, 330, 363, 809, 1041, 1053, 1057
ApeKI GCWGC 2 cut(s) 1304, 1365
ApoI RAATTY 2 cut(s) 113, 803
AsiGI ACCGGT 2 cut(s) 380, 410
AspLEI GCGC 1 cut(s) 629
AspS9I GGNCC 5 cut(s) 132, 141, 295, 809, 1041
AsuC2I CCSGG 1 cut(s) 1045
AsuHPI GGTGA 5 cut(s) 235, 256, 644, 671, 1162
AvaII GGWCC 2 cut(s) 132, 295
BaeGI GKGCMC 1 cut(s) 230
BalI TGGCCA 1 cut(s) 332
BanI GGYRCC 3 cut(s) 173, 227, 404
BbvI GCAGC 2 cut(s) 1316, 1352
BccI CCATC 6 cut(s) 30, 281, 569, 820, 851, 1321
BceAI ACGGC 1 cut(s) 295
BcgI CGANNNNNNTGC 2 cut(s) 376, 410
BciT130I CCWGG 1 cut(s) 329
BcnI CCSGG 1 cut(s) 1045
BcoDI GTCTC 1 cut(s) 207
BcuI ACTAGT 1 cut(s) 1288
BfaI CTAG 7 cut(s) 206, 687, 1029, 1103, 1230, 1289, 1310
BfuAI ACCTGC 1 cut(s) 620
BisI GCNGC 4 cut(s) 318, 366, 1305, 1366
BlsI GCNGC 4 cut(s) 319, 367, 1306, 1367
Bme1390I CCNGG 2 cut(s) 329, 1045
Bme18I GGWCC 2 cut(s) 132, 295
BmeRI GACNNNNNGTC 1 cut(s) 10
BmgT120I GGNCC 5 cut(s) 132, 141, 295, 809, 1041
BmiI GGNNCC 6 cut(s) 175, 229, 271, 406, 1021, 1042
BmrFI CCNGG 2 cut(s) 329, 1045
BmrI ACTGGG 1 cut(s) 75
BmsI GCATC 2 cut(s) 408, 1254
BmuI ACTGGG 1 cut(s) 75
BpuMI CCSGG 1 cut(s) 1045
BsaJI CCNNGG 4 cut(s) 327, 498, 546, 1044
BsaWI WCCGGW 5 cut(s) 129, 245, 266, 380, 410
Bsc4I CCNNNNNNNGG 1 cut(s) 344
Bse118I RCCGGY 4 cut(s) 292, 380, 410, 1055
Bse1I ACTGG 8 cut(s) 81, 429, 474, 566, 647, 1060, 1172, 1221
Bse3DI GCAATG 3 cut(s) 57, 165, 312
BseBI CCWGG 1 cut(s) 329
BseDI CCNNGG 4 cut(s) 327, 498, 546, 1044
BseGI GGATG 6 cut(s) 52, 180, 580, 643, 1332, 1392
BseLI CCNNNNNNNGG 1 cut(s) 344
BseMI GCAATG 3 cut(s) 57, 165, 312
BseMII CTCAG 2 cut(s) 921, 1343
BseNI ACTGG 8 cut(s) 81, 429, 474, 566, 647, 1060, 1172, 1221
BseRI GAGGAG 2 cut(s) 39, 1093
BseSI GKGCMC 1 cut(s) 230
BseXI GCAGC 2 cut(s) 1316, 1352
BseYI CCCAGC 1 cut(s) 1205
BsgI GTGCAG 1 cut(s) 1323
Bsh1236I CGCG 1 cut(s) 500
BshFI GGCC 9 cut(s) 143, 197, 311, 332, 365, 811, 1043, 1055, 1059
BshNI GGYRCC 3 cut(s) 173, 227, 404
BshTI ACCGGT 2 cut(s) 380, 410
BsiSI CCGG 9 cut(s) 130, 246, 267, 293, 369, 381, 411, 1044, 1056
BslFI GGGAC 3 cut(s) 886, 1153, 1247
BslI CCNNNNNNNGG 1 cut(s) 344
BsmAI GTCTC 1 cut(s) 207
BsmFI GGGAC 3 cut(s) 886, 1153, 1247
BsnI GGCC 9 cut(s) 143, 197, 311, 332, 365, 811, 1043, 1055, 1059
Bsp1286I GDGCHC 1 cut(s) 230
Bsp143I GATC 4 cut(s) 237, 438, 937, 978
Bsp19I CCATGG 1 cut(s) 546
BspACI CCGC 4 cut(s) 318, 366, 498, 500
BspANI GGCC 9 cut(s) 143, 197, 311, 332, 365, 811, 1043, 1055, 1059
BspCNI CTCAG 2 cut(s) 920, 1344
BspFNI CGCG 1 cut(s) 500
BspLI GGNNCC 6 cut(s) 175, 229, 271, 406, 1021, 1042
BspMI ACCTGC 1 cut(s) 620
BspPI GGATC 1 cut(s) 433
BspT107I GGYRCC 3 cut(s) 173, 227, 404
BsrDI GCAATG 3 cut(s) 57, 165, 312
BsrFI RCCGGY 4 cut(s) 292, 380, 410, 1055
BsrI ACTGG 8 cut(s) 81, 429, 474, 566, 647, 1060, 1172, 1221
BssAI RCCGGY 4 cut(s) 292, 380, 410, 1055
BssECI CCNNGG 4 cut(s) 327, 498, 546, 1044
BssMI GATC 4 cut(s) 237, 438, 937, 978
BssT1I CCWWGG 1 cut(s) 546
Bst2UI CCWGG 1 cut(s) 329
Bst4CI ACNGT 2 cut(s) 155, 985
Bst6I CTCTTC 1 cut(s) 1245
BstAPI GCANNNNNTGC 1 cut(s) 529
BstC8I GCNNGC 2 cut(s) 846, 1057
BstDEI CTNAG 3 cut(s) 169, 907, 1352
BstDSI CCRYGG 2 cut(s) 498, 546
BstEII GGTNACC 1 cut(s) 1150
BstF5I GGATG 6 cut(s) 52, 180, 580, 643, 1332, 1392
BstFNI CGCG 1 cut(s) 500
BstHHI GCGC 1 cut(s) 629
BstKTI GATC 4 cut(s) 240, 441, 940, 981
BstMAI GTCTC 1 cut(s) 207
BstMBI GATC 4 cut(s) 237, 438, 937, 978
BstMWI GCNNNNNNNGC 7 cut(s) 98, 171, 317, 323, 497, 529, 1226
BstNI CCWGG 1 cut(s) 329
BstNSI RCATGY 2 cut(s) 848, 1240
BstPI GGTNACC 1 cut(s) 1150
BstSCI CCNGG 2 cut(s) 327, 1043
BstSLI GKGCMC 1 cut(s) 230
BstUI CGCG 1 cut(s) 500
BstV1I GCAGC 2 cut(s) 1316, 1352
BstXI CCANNNNNNTGG 2 cut(s) 328, 547
BsuRI GGCC 9 cut(s) 143, 197, 311, 332, 365, 811, 1043, 1055, 1059
BtgI CCRYGG 2 cut(s) 498, 546
BtgZI GCGATG 1 cut(s) 54
BtsCI GGATG 6 cut(s) 52, 180, 580, 643, 1332, 1392
BtsI GCAGTG 1 cut(s) 1275
BtsIMutI CAGTG 4 cut(s) 559, 654, 915, 1275
BveI ACCTGC 1 cut(s) 620
Cac8I GCNNGC 2 cut(s) 846, 1057
CfoI GCGC 1 cut(s) 629
Cfr10I RCCGGY 4 cut(s) 292, 380, 410, 1055
Cfr13I GGNCC 5 cut(s) 132, 141, 295, 809, 1041
Cfr42I CCGCGG 1 cut(s) 501
Csp6I GTAC 2 cut(s) 508, 1063
CspAI ACCGGT 2 cut(s) 380, 410
CspCI CAANNNNNGTGG 2 cut(s) 174, 209
CviQI GTAC 2 cut(s) 508, 1063
DdeI CTNAG 3 cut(s) 169, 907, 1352
DpnI GATC 4 cut(s) 239, 440, 939, 980
DpnII GATC 4 cut(s) 237, 438, 937, 978
DriI GACNNNNNGTC 1 cut(s) 10
EaeI YGGCCR 4 cut(s) 330, 363, 1053, 1057
Eam1104I CTCTTC 1 cut(s) 1245
Eam1105I GACNNNNNGTC 1 cut(s) 10
EarI CTCTTC 1 cut(s) 1245
Eco130I CCWWGG 1 cut(s) 546
Eco47I GGWCC 2 cut(s) 132, 295
Eco91I GGTNACC 1 cut(s) 1150
EcoO65I GGTNACC 1 cut(s) 1150
EcoRII CCWGG 1 cut(s) 327
EcoT14I CCWWGG 1 cut(s) 546
EcoT22I ATGCAT 2 cut(s) 850, 1242
ErhI CCWWGG 1 cut(s) 546
FaqI GGGAC 3 cut(s) 886, 1153, 1247
Fnu4HI GCNGC 4 cut(s) 318, 366, 1305, 1366
FokI GGATG 6 cut(s) 39, 167, 587, 630, 1339, 1399
FseI GGCCGGCC 1 cut(s) 1059
Fsp4HI GCNGC 4 cut(s) 318, 366, 1305, 1366
FspBI CTAG 7 cut(s) 206, 687, 1029, 1103, 1230, 1289, 1310
GlaI GCGC 1 cut(s) 628
GluI GCNGC 4 cut(s) 318, 366, 1305, 1366
GsaI CCCAGC 1 cut(s) 1209
HaeIII GGCC 9 cut(s) 143, 197, 311, 332, 365, 811, 1043, 1055, 1059
HapII CCGG 9 cut(s) 130, 246, 267, 293, 369, 381, 411, 1044, 1056
HhaI GCGC 1 cut(s) 629
Hin6I GCGC 1 cut(s) 627
HinP1I GCGC 1 cut(s) 627
HincII GTYRAC 1 cut(s) 495
HindII GTYRAC 1 cut(s) 495
HinfI GANTC 6 cut(s) 11, 65, 249, 372, 760, 1253
HpaI GTTAAC 1 cut(s) 495
HpaII CCGG 9 cut(s) 130, 246, 267, 293, 369, 381, 411, 1044, 1056
HphI GGTGA 5 cut(s) 235, 256, 644, 671, 1162
Hpy166II GTNNAC 1 cut(s) 495
Hpy188I TCNGA 2 cut(s) 937, 1019
Hpy8I GTNNAC 1 cut(s) 495
HpyAV CCTTC 4 cut(s) 301, 511, 650, 738
HpyCH4III ACNGT 2 cut(s) 155, 985
HpyF10VI GCNNNNNNNGC 7 cut(s) 98, 171, 317, 323, 497, 529, 1226
HpyF3I CTNAG 3 cut(s) 169, 907, 1352
HspAI GCGC 1 cut(s) 627
KroI GCCGGC 1 cut(s) 1055
KroNI GCCGGC 1 cut(s) 1057
KspAI GTTAAC 1 cut(s) 495
KspI CCGCGG 1 cut(s) 501
Kzo9I GATC 4 cut(s) 237, 438, 937, 978
LmnI GCTCC 2 cut(s) 269, 1019
Lsp1109I GCAGC 2 cut(s) 1316, 1352
LweI GCATC 2 cut(s) 408, 1254
MaeI CTAG 7 cut(s) 206, 687, 1029, 1103, 1230, 1289, 1310
MaeIII GTNAC 2 cut(s) 1034, 1150
MalI GATC 4 cut(s) 239, 440, 939, 980
MboI GATC 4 cut(s) 237, 438, 937, 978
MboII GAAGA 5 cut(s) 232, 686, 689, 844, 1262
MhlI GDGCHC 1 cut(s) 230
MlsI TGGCCA 1 cut(s) 332
MluNI TGGCCA 1 cut(s) 332
MlyI GAGTC 3 cut(s) 20, 74, 1262
MmeI TCCRAC 3 cut(s) 59, 322, 552
Mox20I TGGCCA 1 cut(s) 332
Mph1103I ATGCAT 2 cut(s) 850, 1242
MroNI GCCGGC 1 cut(s) 1055
MscI TGGCCA 1 cut(s) 332
MseI TTAA 6 cut(s) 200, 494, 513, 621, 740, 801
Msp20I TGGCCA 1 cut(s) 332
MspA1I CMGCKG 2 cut(s) 109, 500
MspI CCGG 9 cut(s) 130, 246, 267, 293, 369, 381, 411, 1044, 1056
MspR9I CCNGG 2 cut(s) 329, 1045
MvaI CCWGG 1 cut(s) 329
MvnI CGCG 1 cut(s) 500
MwoI GCNNNNNNNGC 7 cut(s) 98, 171, 317, 323, 497, 529, 1226
NaeI GCCGGC 1 cut(s) 1057
NciI CCSGG 1 cut(s) 1045
NcoI CCATGG 1 cut(s) 546
NdeII GATC 4 cut(s) 237, 438, 937, 978
NgoMIV GCCGGC 1 cut(s) 1055
NlaIV GGNNCC 6 cut(s) 175, 229, 271, 406, 1021, 1042
NmeAIII GCCGAG 2 cut(s) 88, 169
NmuCI GTSAC 2 cut(s) 1034, 1150
NsiI ATGCAT 2 cut(s) 850, 1242
NspI RCATGY 2 cut(s) 848, 1240
PaeI GCATGC 1 cut(s) 848
PaqCI CACCTGC 1 cut(s) 620
PcsI WCGNNNNNNNCGW 1 cut(s) 351
PdiI GCCGGC 1 cut(s) 1057
PfeI GAWTC 3 cut(s) 249, 372, 760
PinAI ACCGGT 2 cut(s) 380, 410
PkrI GCNGC 4 cut(s) 319, 367, 1306, 1367
PleI GAGTC 3 cut(s) 19, 73, 1261
PpsI GAGTC 3 cut(s) 19, 73, 1261
PsiI TTATAA 1 cut(s) 773
Psp6I CCWGG 1 cut(s) 327
PspEI GGTNACC 1 cut(s) 1150
PspFI CCCAGC 1 cut(s) 1205
PspGI CCWGG 1 cut(s) 327
PspN4I GGNNCC 6 cut(s) 175, 229, 271, 406, 1021, 1042
PspPI GGNCC 5 cut(s) 132, 141, 295, 809, 1041
PvuII CAGCTG 1 cut(s) 109
RigI GGCCGGCC 1 cut(s) 1059
RsaI GTAC 2 cut(s) 509, 1064
RsaNI GTAC 2 cut(s) 508, 1063
SacII CCGCGG 1 cut(s) 501
SaqAI TTAA 6 cut(s) 200, 494, 513, 621, 740, 801
SatI GCNGC 4 cut(s) 318, 366, 1305, 1366
Sau3AI GATC 4 cut(s) 237, 438, 937, 978
Sau96I GGNCC 5 cut(s) 132, 141, 295, 809, 1041
SchI GAGTC 3 cut(s) 20, 74, 1262
ScrFI CCNGG 2 cut(s) 329, 1045
SduI GDGCHC 1 cut(s) 230
SfaNI GCATC 2 cut(s) 408, 1254
Sfr303I CCGCGG 1 cut(s) 501
SgrBI CCGCGG 1 cut(s) 501
SinI GGWCC 2 cut(s) 132, 295
SpeI ACTAGT 1 cut(s) 1288
SphI GCATGC 1 cut(s) 848
SsiI CCGC 4 cut(s) 318, 366, 498, 500
SspI AATATT 1 cut(s) 900
SspMI CTAG 7 cut(s) 206, 687, 1029, 1103, 1230, 1289, 1310
StyD4I CCNGG 2 cut(s) 327, 1043
StyI CCWWGG 1 cut(s) 546
TaaI ACNGT 2 cut(s) 155, 985
TaqI TCGA 3 cut(s) 977, 1298, 1405
TatI WGTACW 2 cut(s) 507, 1062
TauI GCSGC 2 cut(s) 320, 368
TfiI GAWTC 3 cut(s) 249, 372, 760
Tru1I TTAA 6 cut(s) 200, 494, 513, 621, 740, 801
Tru9I TTAA 6 cut(s) 200, 494, 513, 621, 740, 801
TscAI CASTG 4 cut(s) 566, 654, 915, 1282
TseFI GTSAC 2 cut(s) 1034, 1150
TseI GCWGC 2 cut(s) 1304, 1365
Tsp45I GTSAC 2 cut(s) 1034, 1150
TspDTI ATGAA 4 cut(s) 320, 598, 853, 1010
TspRI CASTG 4 cut(s) 566, 654, 915, 1282
VpaK11BI GGWCC 2 cut(s) 132, 295
XapI RAATTY 2 cut(s) 113, 803
XceI RCATGY 2 cut(s) 848, 1240
XcmI CCANNNNNNNNNTGG 3 cut(s) 1067, 1120, 1172
XspI CTAG 7 cut(s) 206, 687, 1029, 1103, 1230, 1289, 1310
Zsp2I ATGCAT 2 cut(s) 850, 1242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.