Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010655

Physical Location & Seq

Genomic Coordinates Reverse (-)

12613014 .. 12615414

Gene Structure 2401 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G29400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 957 bp

ATGGCGGAGAAGCCGGCGCAAGAGCAAGAGCAGAAGCGAGCGATGGAACCTGCAGTTCTCGACGATATTATTCGTCGTTTGGTTGAGTTTCGGAACACGAGACCTGGATCGGGGAAGCAAGTTCATCTCAGTGAAGGTGAAATTCGTCAGCTTTGTGCTGTCTCCAAAGAAATATTTCTTCAACAGCCCAATCTGCTTGAATTGGAAGCTCCCATCAAGATCTGCGGTGATATTCATGGGCAGTATTCAGATCTATTGAGGCTTTTTGAGTATGGAGGGTTCCCTCCCGAAGCTAATTATTTGTTCTTGGGTGATTATGTTGACCGTGGCAAGCAAAGCTTGGAAACAATATGTCTTCTTCTAGCTTACAAAATCAAGTACCCTGAGAACTTCTTCTTGTTGAGAGGGAATCATGAATCTGCTTCCATTAATCGTATTTACGGTTTCTATGATGAGTGCAAACGCAGGTTCAATGTCAGACTCTGGAAAATATTCACCGATTGCTTTAACTGTCTTCCTGTGGCCGCCTTAATTGATGACAGAATACTATGTATGCATGGTGGGATTTCCCCAGAGCTGAAAAGTTTGGACCAGATTAGAAATATTGCACGGCCGATGGATATTCCGGAGTCTGGTTTGGTATGTGATTTACTATGGTCGGATCCTAGTGGAGACGTAGGCTGGGGCATGAATGATCGTGGTGTTTCATACACTTTTGGAGCTGACAAAGTCGCAGAGTTCTTGGAGAAACATGACATGGACCTTATCTGTCGTGCCCACCAGGTTGTTGAAGATGGGTATGAGTTCTTTGCAGAAAGACAACTTGTTACAGTATTTTCAGCTCCCAACTATTGCGGGGAATTTGACAACGCTGGCGCAATGATGAGCATTGATGAGAGCTTAATGTGCTCATTCCAGATTCTAAAGCCGTCAGAAAAGAAGTCGCCTTTTCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000164 GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008287 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0032991 GO:0036211 GO:0042578 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:0140096 GO:1901564 GO:1902494 GO:1903293

KEGG Pathways

Metabolic & Signaling

ko03015 ko04022 ko04024 ko04113 ko04114 ko04218 ko04261 ko04270 ko04390 ko04510 ko04611 ko04720 ko04728 ko04750 ko04810 ko04910 ko04921 ko04931 ko05031 ko05034 ko05168 ko05205 map03015 map04022 map04024 map04113 map04114 map04218 map04261 map04270 map04390 map04510 map04611 map04720 map04728 map04750 map04810 map04910 map04921 map04931 map05031 map05034 map05168 map05205

Pfam Domains

Protein Families

Metallophos STPPase_N

Protein Analysis

318

Amino Acids

36.28

Weight (kDa)

5.02

Isoelectric Point (pI)

48.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
STPPase_N	PF16891	20 - 69	7.1e-20	Serine-threonine protein phosphatase N-terminal domain
Metallophos	PF00149	71 - 263	5.6e-49	Calcineurin-like phosphoesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010655)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29400 AT3G46820 AT5G59160 AT5G59160 AT5G59160
fragaria_vesca	FvH4_6g02160 FvH4_6g02160
malus_domestica	MD04G1229100.v1.1 MD12G1246200.v1.1
prunus_persica	Prupe.6G349000_v2.0.a1
pyrus_communis	pycom04g20300 pycom12g22570
rosa_chinensis	RchiOBHm_Chr3g0449941
rosa_laevigata	RLG00000025773
rosa_multiflora	Rmu_sc0002646.1_g000002
rosa_roxburghii	Rroxscaffold_6G00427730
rosa_rugosa	Rorug02G0624100
rosa_samantha	Rh3AG023200 Rh3DG023700
rosa_wichuraiana	Rw3G001860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	58, 456
AccIII	TCCGGA	1 cut(s)	625
AciI	CCGC	4 cut(s)	5, 225, 525, 855
AclWI	GGATC	3 cut(s)	115, 656, 669
AcoI	YGGCCR	2 cut(s)	522, 611
AcsI	RAATTY	2 cut(s)	141, 860
AfaI	GTAC	1 cut(s)	380
AfiI	CCNNNNNNNGG	2 cut(s)	110, 632
AgsI	TTSAA	4 cut(s)	182, 200, 472, 791
AjnI	CCWGG	2 cut(s)	103, 780
AluBI	AGCT	9 cut(s)	151, 209, 293, 339, 365, 577, 722, 842, 900
AluI	AGCT	9 cut(s)	151, 209, 293, 339, 365, 577, 722, 842, 900
Alw21I	GWGCWC	1 cut(s)	911
Alw26I	GTCTC	3 cut(s)	94, 166, 666
AlwI	GGATC	3 cut(s)	115, 656, 669
AlwNI	CAGNNNCTG	1 cut(s)	483
Aor13HI	TCCGGA	1 cut(s)	625
AoxI	GGCC	2 cut(s)	522, 611
ApoI	RAATTY	2 cut(s)	141, 860
AseI	ATTAAT	1 cut(s)	429
Asp700I	GAANNNNTTC	3 cut(s)	174, 392, 491
AspLEI	GCGC	2 cut(s)	19, 878
AspS9I	GGNCC	2 cut(s)	589, 760
AsuHPI	GGTGA	4 cut(s)	149, 239, 323, 487
AvaII	GGWCC	2 cut(s)	589, 760
BaeGI	GKGCMC	1 cut(s)	778
BamHI	GGATCC	1 cut(s)	661
BauI	CACGAG	1 cut(s)	97
BbsI	GAAGAC	2 cut(s)	347, 506
Bbv12I	GWGCWC	1 cut(s)	911
BccI	CCATC	4 cut(s)	37, 221, 610, 788
BceAI	ACGGC	2 cut(s)	626, 913
BciT130I	CCWGG	2 cut(s)	105, 782
BcoDI	GTCTC	3 cut(s)	94, 166, 666
BfaI	CTAG	2 cut(s)	362, 666
BfmI	CTRYAG	1 cut(s)	51
BfuAI	ACCTGC	2 cut(s)	58, 456
BglII	AGATCT	2 cut(s)	219, 250
BisI	GCNGC	1 cut(s)	525
BlsI	GCNGC	1 cut(s)	526
Bme1390I	CCNGG	2 cut(s)	105, 782
Bme18I	GGWCC	2 cut(s)	589, 760
BmgT120I	GGNCC	2 cut(s)	589, 760
BmiI	GGNNCC	3 cut(s)	48, 281, 663
BmrFI	CCNGG	2 cut(s)	105, 782
BpiI	GAAGAC	2 cut(s)	347, 506
BsaI	GGTCTC	1 cut(s)	94
BsaJI	CCNNGG	1 cut(s)	325
BsaWI	WCCGGW	1 cut(s)	625
Bsc4I	CCNNNNNNNGG	2 cut(s)	110, 632
Bse118I	RCCGGY	1 cut(s)	13
Bse3DI	GCAATG	1 cut(s)	885
BseAI	TCCGGA	1 cut(s)	625
BseBI	CCWGG	2 cut(s)	105, 782
BseDI	CCNNGG	1 cut(s)	325
BseLI	CCNNNNNNNGG	2 cut(s)	110, 632
BseMI	GCAATG	1 cut(s)	885
BseMII	CTCAG	2 cut(s)	142, 375
BseSI	GKGCMC	1 cut(s)	778
BseX3I	CGGCCG	1 cut(s)	611
BseYI	CCCAGC	1 cut(s)	681
Bsh1285I	CGRYCG	1 cut(s)	614
BshFI	GGCC	2 cut(s)	524, 613
BsiEI	CGRYCG	1 cut(s)	614
BsiHKAI	GWGCWC	1 cut(s)	911
BsiSI	CCGG	2 cut(s)	14, 626
BslI	CCNNNNNNNGG	2 cut(s)	110, 632
BsmAI	GTCTC	3 cut(s)	94, 166, 666
BsmBI	CGTCTC	1 cut(s)	666
BsnI	GGCC	2 cut(s)	524, 613
Bso31I	GGTCTC	1 cut(s)	94
Bsp1286I	GDGCHC	2 cut(s)	778, 911
Bsp13I	TCCGGA	1 cut(s)	625
Bsp143I	GATC	5 cut(s)	107, 219, 250, 661, 694
BspACI	CCGC	4 cut(s)	5, 225, 525, 855
BspANI	GGCC	2 cut(s)	524, 613
BspCNI	CTCAG	2 cut(s)	141, 376
BspEI	TCCGGA	1 cut(s)	625
BspHI	TCATGA	1 cut(s)	412
BspLI	GGNNCC	3 cut(s)	48, 281, 663
BspMAI	CTGCAG	1 cut(s)	55
BspMI	ACCTGC	2 cut(s)	58, 456
BspPI	GGATC	3 cut(s)	115, 656, 669
BspTNI	GGTCTC	1 cut(s)	94
BsrDI	GCAATG	1 cut(s)	885
BsrFI	RCCGGY	1 cut(s)	13
BssAI	RCCGGY	1 cut(s)	13
BssECI	CCNNGG	1 cut(s)	325
BssMI	GATC	5 cut(s)	107, 219, 250, 661, 694
BssSI	CACGAG	1 cut(s)	97
Bst2BI	CACGAG	1 cut(s)	97
Bst2UI	CCWGG	2 cut(s)	105, 782
Bst4CI	ACNGT	4 cut(s)	326, 443, 512, 832
BstC8I	GCNNGC	4 cut(s)	15, 39, 332, 874
BstDEI	CTNAG	2 cut(s)	128, 384
BstDSI	CCRYGG	1 cut(s)	325
BstHHI	GCGC	2 cut(s)	19, 878
BstKTI	GATC	5 cut(s)	110, 222, 253, 664, 697
BstMAI	GTCTC	3 cut(s)	94, 166, 666
BstMBI	GATC	5 cut(s)	107, 219, 250, 661, 694
BstMCI	CGRYCG	1 cut(s)	614
BstMWI	GCNNNNNNNGC	3 cut(s)	193, 336, 906
BstNI	CCWGG	2 cut(s)	105, 782
BstSCI	CCNGG	2 cut(s)	103, 780
BstSFI	CTRYAG	1 cut(s)	51
BstSLI	GKGCMC	1 cut(s)	778
BstV2I	GAAGAC	2 cut(s)	347, 506
BstX2I	RGATCY	3 cut(s)	219, 250, 661
BstYI	RGATCY	3 cut(s)	219, 250, 661
BstZI	CGGCCG	1 cut(s)	611
BsuRI	GGCC	2 cut(s)	524, 613
BtgI	CCRYGG	1 cut(s)	325
BtgZI	GCGATG	1 cut(s)	56
BtsIMutI	CAGTG	1 cut(s)	136
BveI	ACCTGC	2 cut(s)	58, 456
Cac8I	GCNNGC	4 cut(s)	15, 39, 332, 874
CaiI	CAGNNNCTG	1 cut(s)	483
CciI	TCATGA	1 cut(s)	412
CfoI	GCGC	2 cut(s)	19, 878
Cfr10I	RCCGGY	1 cut(s)	13
Cfr13I	GGNCC	2 cut(s)	589, 760
CsiI	ACCWGGT	1 cut(s)	780
Csp6I	GTAC	1 cut(s)	379
CviAII	CATG	6 cut(s)	236, 413, 557, 688, 752, 757
CviQI	GTAC	1 cut(s)	379
DdeI	CTNAG	2 cut(s)	128, 384
DpnI	GATC	5 cut(s)	109, 221, 252, 663, 696
DpnII	GATC	5 cut(s)	107, 219, 250, 661, 694
EaeI	YGGCCR	2 cut(s)	522, 611
EagI	CGGCCG	1 cut(s)	611
EciI	GGCGGA	1 cut(s)	20
EclXI	CGGCCG	1 cut(s)	611
Eco31I	GGTCTC	1 cut(s)	94
Eco47I	GGWCC	2 cut(s)	589, 760
Eco52I	CGGCCG	1 cut(s)	611
EcoRII	CCWGG	2 cut(s)	103, 780
EcoT22I	ATGCAT	1 cut(s)	558
Esp3I	CGTCTC	1 cut(s)	666
FaeI	CATG	6 cut(s)	239, 416, 560, 691, 755, 760
FalI	AAGNNNNNCTT	2 cut(s)	323, 355
FatI	CATG	6 cut(s)	235, 412, 556, 687, 751, 756
FauI	CCCGC	1 cut(s)	848
Fnu4HI	GCNGC	1 cut(s)	525
Fsp4HI	GCNGC	1 cut(s)	525
FspBI	CTAG	2 cut(s)	362, 666
GlaI	GCGC	2 cut(s)	18, 877
GluI	GCNGC	1 cut(s)	525
GsaI	CCCAGC	1 cut(s)	685
HaeIII	GGCC	2 cut(s)	524, 613
HapII	CCGG	2 cut(s)	14, 626
HhaI	GCGC	2 cut(s)	19, 878
Hin1II	CATG	6 cut(s)	239, 416, 560, 691, 755, 760
Hin6I	GCGC	2 cut(s)	17, 876
HinP1I	GCGC	2 cut(s)	17, 876
HincII	GTYRAC	1 cut(s)	322
HindII	GTYRAC	1 cut(s)	322
HindIII	AAGCTT	1 cut(s)	337
HinfI	GANTC	5 cut(s)	409, 416, 480, 629, 919
HpaII	CCGG	2 cut(s)	14, 626
HphI	GGTGA	4 cut(s)	149, 239, 323, 487
Hpy166II	GTNNAC	1 cut(s)	322
Hpy188I	TCNGA	5 cut(s)	93, 250, 479, 661, 934
Hpy188III	TCNNGA	7 cut(s)	59, 217, 287, 413, 484, 626, 916
Hpy8I	GTNNAC	1 cut(s)	322
Hpy99I	CGWCG	2 cut(s)	65, 78
HpyAV	CCTTC	1 cut(s)	128
HpyCH4III	ACNGT	4 cut(s)	326, 443, 512, 832
HpyCH4IV	ACGT	1 cut(s)	675
HpyCH4V	TGCA	5 cut(s)	53, 459, 556, 608, 812
HpyF10VI	GCNNNNNNNGC	3 cut(s)	193, 336, 906
HpyF3I	CTNAG	2 cut(s)	128, 384
HpySE526I	ACGT	1 cut(s)	675
Hsp92II	CATG	6 cut(s)	239, 416, 560, 691, 755, 760
HspAI	GCGC	2 cut(s)	17, 876
Kpn2I	TCCGGA	1 cut(s)	625
KroI	GCCGGC	1 cut(s)	13
KroNI	GCCGGC	1 cut(s)	15
Kzo9I	GATC	5 cut(s)	107, 219, 250, 661, 694
LmnI	GCTCC	3 cut(s)	214, 719, 847
MabI	ACCWGGT	1 cut(s)	780
MaeI	CTAG	2 cut(s)	362, 666
MaeII	ACGT	1 cut(s)	675
MaeIII	GTNAC	1 cut(s)	826
MalI	GATC	5 cut(s)	109, 221, 252, 663, 696
MboI	GATC	5 cut(s)	107, 219, 250, 661, 694
MboII	GAAGA	6 cut(s)	170, 347, 350, 385, 506, 803
MflI	RGATCY	3 cut(s)	219, 250, 661
MhlI	GDGCHC	2 cut(s)	778, 911
MluCI	AATT	5 cut(s)	141, 200, 295, 531, 860
MlyI	GAGTC	2 cut(s)	474, 638
MmeI	TCCRAC	1 cut(s)	639
MnlI	CCTC	4 cut(s)	252, 269, 294, 398
Mph1103I	ATGCAT	1 cut(s)	558
MroI	TCCGGA	1 cut(s)	625
MroNI	GCCGGC	1 cut(s)	13
MroXI	GAANNNNTTC	3 cut(s)	174, 392, 491
MseI	TTAA	4 cut(s)	429, 507, 530, 902
MslI	CAYNNNNRTG	1 cut(s)	129
MspI	CCGG	2 cut(s)	14, 626
MspR9I	CCNGG	2 cut(s)	105, 782
MvaI	CCWGG	2 cut(s)	105, 782
MwoI	GCNNNNNNNGC	3 cut(s)	193, 336, 906
NaeI	GCCGGC	1 cut(s)	15
NdeII	GATC	5 cut(s)	107, 219, 250, 661, 694
NgoMIV	GCCGGC	1 cut(s)	13
NlaIII	CATG	6 cut(s)	239, 416, 560, 691, 755, 760
NlaIV	GGNNCC	3 cut(s)	48, 281, 663
NsiI	ATGCAT	1 cut(s)	558
PagI	TCATGA	1 cut(s)	412
PdiI	GCCGGC	1 cut(s)	15
PdmI	GAANNNNTTC	3 cut(s)	174, 392, 491
PfeI	GAWTC	3 cut(s)	409, 416, 919
PflFI	GACNNNGTC	1 cut(s)	728
PkrI	GCNGC	1 cut(s)	526
PleI	GAGTC	2 cut(s)	474, 637
PpsI	GAGTC	2 cut(s)	474, 637
PshBI	ATTAAT	1 cut(s)	429
Psp6I	CCWGG	2 cut(s)	103, 780
PspFI	CCCAGC	1 cut(s)	681
PspGI	CCWGG	2 cut(s)	103, 780
PspN4I	GGNNCC	3 cut(s)	48, 281, 663
PspPI	GGNCC	2 cut(s)	589, 760
PsrI	GAACNNNNNNTAC	2 cut(s)	263, 295
PstI	CTGCAG	1 cut(s)	55
PstNI	CAGNNNCTG	1 cut(s)	483
PsuI	RGATCY	3 cut(s)	219, 250, 661
PsyI	GACNNNGTC	1 cut(s)	728
RsaI	GTAC	1 cut(s)	380
RsaNI	GTAC	1 cut(s)	379
RseI	CAYNNNNRTG	1 cut(s)	129
SaqAI	TTAA	4 cut(s)	429, 507, 530, 902
SatI	GCNGC	1 cut(s)	525
Sau3AI	GATC	5 cut(s)	107, 219, 250, 661, 694
Sau96I	GGNCC	2 cut(s)	589, 760
SchI	GAGTC	2 cut(s)	474, 638
ScrFI	CCNGG	2 cut(s)	105, 782
SduI	GDGCHC	2 cut(s)	778, 911
SexAI	ACCWGGT	1 cut(s)	780
SfcI	CTRYAG	1 cut(s)	51
SinI	GGWCC	2 cut(s)	589, 760
SmiMI	CAYNNNNRTG	1 cut(s)	129
Sse9I	AATT	5 cut(s)	141, 200, 295, 531, 860
SsiI	CCGC	4 cut(s)	5, 225, 525, 855
SspI	AATATT	3 cut(s)	174, 492, 604
SspMI	CTAG	2 cut(s)	362, 666
StyD4I	CCNGG	2 cut(s)	103, 780
TaaI	ACNGT	4 cut(s)	326, 443, 512, 832
TaiI	ACGT	1 cut(s)	678
TaqI	TCGA	1 cut(s)	60
TasI	AATT	5 cut(s)	141, 200, 295, 531, 860
TauI	GCSGC	1 cut(s)	527
TfiI	GAWTC	3 cut(s)	409, 416, 919
Tru1I	TTAA	4 cut(s)	429, 507, 530, 902
Tru9I	TTAA	4 cut(s)	429, 507, 530, 902
TscAI	CASTG	1 cut(s)	136
TspDTI	ATGAA	5 cut(s)	113, 224, 429, 696, 704
TspRI	CASTG	1 cut(s)	136
Tth111I	GACNNNGTC	1 cut(s)	728
VpaK11BI	GGWCC	2 cut(s)	589, 760
VspI	ATTAAT	1 cut(s)	429
XapI	RAATTY	2 cut(s)	141, 860
XmnI	GAANNNNTTC	3 cut(s)	174, 392, 491
XspI	CTAG	2 cut(s)	362, 666
Zsp2I	ATGCAT	1 cut(s)	558

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.