Rorug02G0624100

serine threonine-protein phosphatase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
73993498 .. 73993701
204 bp
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UTR
Exon/CDS
Intron
Rorug02G0624100.1

Sequence Viewer

Length: 204 bp
ATGAGTCTCTGTGAGGATGCGGACAATCTCGGCGGTGCTTCCTCCGTCGCAGTGGTGAAATTCTTGAGCTCCTCGACGACACCGTTGAAGGCGATCCCGCCGGAGAAAACGAGGAAGGAAGGCTGGGCGGCGGGGAAAGGGTTGCAAGTGGAGGAGGAGAAGCAACGGCAATGGTTAGGGTTTTGGGAGCGGAGGAGATTTTGA

Protein Analysis

67

Amino Acids

7.51

Weight (kDa)

8.98

Isoelectric Point (pI)

66.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010655)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 190
AciI CCGC 6 cut(s) 20, 33, 98, 128, 131, 190
AclWI GGATC 1 cut(s) 88
AcsI RAATTY 1 cut(s) 59
AgsI TTSAA 1 cut(s) 88
AluBI AGCT 1 cut(s) 69
AluI AGCT 1 cut(s) 69
Alw21I GWGCWC 1 cut(s) 71
Alw26I GTCTC 1 cut(s) 11
AlwI GGATC 1 cut(s) 88
ApoI RAATTY 1 cut(s) 59
AsuHPI GGTGA 1 cut(s) 67
BanII GRGCYC 1 cut(s) 71
Bbv12I GWGCWC 1 cut(s) 71
BceAI ACGGC 1 cut(s) 182
BcoDI GTCTC 1 cut(s) 11
BisI GCNGC 1 cut(s) 129
BlsI GCNGC 1 cut(s) 130
BmsI GCATC 1 cut(s) 7
BpuEI CTTGAG 1 cut(s) 85
Bse3DI GCAATG 1 cut(s) 176
BseGI GGATG 1 cut(s) 22
BseMI GCAATG 1 cut(s) 176
BseRI GAGGAG 3 cut(s) 61, 167, 170
BseYI CCCAGC 1 cut(s) 123
BsiHKAI GWGCWC 1 cut(s) 71
BsiSI CCGG 1 cut(s) 101
BsmAI GTCTC 1 cut(s) 11
Bsp1286I GDGCHC 1 cut(s) 71
Bsp143I GATC 1 cut(s) 93
BspACI CCGC 6 cut(s) 20, 33, 98, 128, 131, 190
BspPI GGATC 1 cut(s) 88
BsrBI CCGCTC 1 cut(s) 190
BsrDI GCAATG 1 cut(s) 176
BssMI GATC 1 cut(s) 93
Bst4CI ACNGT 1 cut(s) 84
BstF5I GGATG 1 cut(s) 22
BstKTI GATC 1 cut(s) 96
BstMAI GTCTC 1 cut(s) 11
BstMBI GATC 1 cut(s) 93
BtsCI GGATG 1 cut(s) 22
BtsI GCAGTG 1 cut(s) 57
BtsIMutI CAGTG 1 cut(s) 57
CviJI RGCY 2 cut(s) 69, 123
CviKI_1 RGCY 2 cut(s) 69, 123
DpnI GATC 1 cut(s) 95
DpnII GATC 1 cut(s) 93
Ecl136II GAGCTC 1 cut(s) 69
Eco24I GRGCYC 1 cut(s) 71
Eco53kI GAGCTC 1 cut(s) 69
EcoICRI GAGCTC 1 cut(s) 69
EcoT38I GRGCYC 1 cut(s) 71
FauI CCCGC 2 cut(s) 105, 124
Fnu4HI GCNGC 1 cut(s) 129
FokI GGATG 1 cut(s) 29
FriOI GRGCYC 1 cut(s) 71
Fsp4HI GCNGC 1 cut(s) 129
GluI GCNGC 1 cut(s) 129
GsaI CCCAGC 1 cut(s) 127
HapII CCGG 1 cut(s) 101
HinfI GANTC 1 cut(s) 4
HpaII CCGG 1 cut(s) 101
HphI GGTGA 1 cut(s) 67
Hpy188III TCNNGA 1 cut(s) 64
Hpy99I CGWCG 2 cut(s) 50, 79
HpyAV CCTTC 3 cut(s) 82, 109, 113
HpyCH4III ACNGT 1 cut(s) 84
HpyCH4V TGCA 1 cut(s) 145
Kzo9I GATC 1 cut(s) 93
LmnI GCTCC 2 cut(s) 74, 187
LpnPI CCDG 2 cut(s) 109, 114
LweI GCATC 1 cut(s) 7
MalI GATC 1 cut(s) 95
MbiI CCGCTC 1 cut(s) 190
MboI GATC 1 cut(s) 93
MhlI GDGCHC 1 cut(s) 71
MluCI AATT 1 cut(s) 59
MlyI GAGTC 1 cut(s) 13
MnlI CCTC 7 cut(s) 7, 52, 82, 105, 145, 148, 186
MspI CCGG 1 cut(s) 101
NdeII GATC 1 cut(s) 93
NmeAIII GCCGAG 1 cut(s) 9
PcsI WCGNNNNNNNCGW 1 cut(s) 80
PkrI GCNGC 1 cut(s) 130
PleI GAGTC 1 cut(s) 12
PpsI GAGTC 1 cut(s) 12
Psp124BI GAGCTC 1 cut(s) 71
PspFI CCCAGC 1 cut(s) 123
SacI GAGCTC 1 cut(s) 71
SatI GCNGC 1 cut(s) 129
Sau3AI GATC 1 cut(s) 93
SchI GAGTC 1 cut(s) 13
SduI GDGCHC 1 cut(s) 71
SetI ASST 1 cut(s) 71
SfaNI GCATC 1 cut(s) 7
SgeI CNNG 9 cut(s) 41, 76, 85, 109, 113, 123, 136, 144, 158
SmlI CTYRAG 1 cut(s) 64
SmoI CTYRAG 1 cut(s) 64
Sse9I AATT 1 cut(s) 59
SsiI CCGC 6 cut(s) 20, 33, 98, 128, 131, 190
SstI GAGCTC 1 cut(s) 71
TaaI ACNGT 1 cut(s) 84
TaqI TCGA 1 cut(s) 74
TasI AATT 1 cut(s) 59
TauI GCSGC 1 cut(s) 131
TscAI CASTG 1 cut(s) 57
TspGWI ACGGA 1 cut(s) 34
TspRI CASTG 1 cut(s) 57
XapI RAATTY 1 cut(s) 59
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.