AT2G30200

carrier protein transacylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0012502
Physical Location & Seq
Reverse (-)
12882948 .. 12885776
2829 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G30200.1

Sequence Viewer

Length: 1182 bp
ATGCGTTCACTGCTTCACCGTACTATCTTACTCACATCTCCGTCTCATTCTCTTATCCGGCGCACTTCTCTCTCCGCCATGGCCACCACCGCCTCCTCTTCCTTGCTCCTCCCTTCCATATCTCTCAACAATCTCTCCTCCTCTAAAAATGCCTCCTTTGGCTTCGCCGCCAAGAATCTCAGCCGATCTAGGATTTCTATGAGCGTCTCTGCTGGATCTCAGAGTACTACTGTTCACGATTCTCTGTTCGCTGATTACAAACCCACCTCTGCTTTTCTCTTTCCCGGTCAGGGAGCTCAAGCAGTAGGAATGGGAAAAGAGTCTCAGAGTGTTGGAGCAGCTGGAGAGTTGTATAAGAAAGCTAATGATATCTTAGGGTATGATCTTTTGGATATTTGTGTTAATGGACCAAAAGAGAAGCTTGATTCTACGGTCATAAGCCAGCCTGCTATTTATGTCACAAGTTTAGCAGCAGTTGAATTGCTCCGTGTTCGTGAAGGCGGAGAACAAATAATTAACTCGGTTGATGTGACTTGCGGTCTCAGTTTGGGAGAGTATACTGCTCTGGCTTTTGCTGGAGCCTTCAGCTTCGAGGACGGGCTGAAGCTTGTAAAACTTAGAGGAGAAGCTATGCAGGCTGCTGCAGATGCTGCTAAGAGTGCCATGGTTAGTATCATAGGGTTGGACTCAGAAAAGGTTCAGCAGTTGTGTGATGCAGCAAATCAAGAAGTAGATGAAGCTGACAAAGTTCAGATCGCAAATTACTTATGTCCGGGTAATTACGCAGTATCTGGAGGTCTTAAAGGAATCGAAGTTGTTGAAGCCAAAGCTAAGTCATTCAAAGCACGAATGACGGTGCGTCTAGCTGTTGCAGGTGCTTTCCACACTAGTTTCATGGAACCAGCAGTCTCGAGATTAGAAGCTGCATTGGCAGCCACAGAGATCAGAAGTCCGAGGATCCCAGTGATCTCGAATGTCGATGCACAGCCTCATGCAGATCCAGACACGATCAAGAAGATACTTGCACGCCAGGTGACATCTCCAGTCCAATGGGAGACAACAGTAAAGACTCTCTTATCCAAAGGACTTAAAAGCAGCTACGAATTGGGACCTGGAAAGGTAATTGCAGGGATATTCAAGAGAGTAGATAAAAGCGCAAGTTTCGAAAACATCAGTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00061 ko00333 ko01100 ko01130 ko01212 map00061 map00333 map01100 map01130 map01212
Pfam Domains
Protein Families
Acyl_transf_1

Protein Analysis

393

Amino Acids

41.52

Weight (kDa)

8.72

Isoelectric Point (pI)

32.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acyl_transf_1 PF00698 92 - 366 3.1e-24 Acyl transferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012502)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G30200 AT2G30200
fragaria_vesca FvH4_3g39690 FvH4_3g39690 FvH4_3g39690
malus_domestica MD03G1055800.v1.1 MD11G1056800.v1.1
prunus_persica Prupe.6G048900_v2.0.a1
pyrus_communis pycom03g04430 pycom11g04780
rosa_chinensis RchiOBHm_Chr5g0071571
rosa_laevigata RLG00000036226
rosa_multiflora Rmu_sc0005745.1_g000009
rosa_roxburghii Rroxscaffold_1G00009600
rosa_rugosa Rorug05G0413300
rosa_samantha Rh5AG469200 Rh5CG512400 Rh5DG499200
rosa_wichuraiana Rw5G043600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 863
Acc36I ACCTGC 1 cut(s) 863
AccI GTMKAC 1 cut(s) 557
AciI CCGC 5 cut(s) 75, 90, 168, 501, 537
AclWI GGATC 4 cut(s) 223, 952, 965, 992
AcoI YGGCCR 1 cut(s) 81
AcuI CTGAAG 2 cut(s) 568, 623
AfaI GTAC 2 cut(s) 22, 226
AfiI CCNNNNNNNGG 1 cut(s) 290
AgsI TTSAA 4 cut(s) 479, 821, 841, 1138
AhdI GACNNNNNGTC 2 cut(s) 537, 858
AhlI ACTAGT 1 cut(s) 887
AjnI CCWGG 2 cut(s) 1029, 1111
Alw21I GWGCWC 1 cut(s) 298
Alw26I GTCTC 6 cut(s) 48, 211, 327, 545, 913, 1049
AlwI GGATC 4 cut(s) 223, 952, 965, 992
AlwNI CAGNNNCTG 2 cut(s) 650, 791
Ama87I CYCGRG 1 cut(s) 910
AoxI GGCC 1 cut(s) 81
ApeKI GCWGC 9 cut(s) 338, 470, 638, 641, 650, 716, 923, 932, 1095
Asp700I GAANNNNTTC 1 cut(s) 696
AspLEI GCGC 2 cut(s) 63, 1157
AspS9I GGNCC 2 cut(s) 407, 1109
AsuC2I CCSGG 2 cut(s) 285, 774
AsuHPI GGTGA 2 cut(s) 8, 1045
AsuII TTCGAA 1 cut(s) 1164
AvaI CYCGRG 1 cut(s) 910
AvaII GGWCC 2 cut(s) 407, 1109
BalI TGGCCA 1 cut(s) 83
BamHI GGATCC 1 cut(s) 957
BanII GRGCYC 1 cut(s) 298
Bbv12I GWGCWC 1 cut(s) 298
BbvI GCAGC 9 cut(s) 350, 482, 625, 628, 637, 728, 910, 944, 1107
BciT130I CCWGG 2 cut(s) 1031, 1113
BcnI CCSGG 2 cut(s) 285, 774
BcoDI GTCTC 6 cut(s) 48, 211, 327, 545, 913, 1049
BcuI ACTAGT 1 cut(s) 887
BfaI CTAG 3 cut(s) 189, 863, 888
BfmI CTRYAG 1 cut(s) 642
BfuAI ACCTGC 1 cut(s) 863
BmcAI AGTACT 1 cut(s) 226
Bme1390I CCNGG 4 cut(s) 285, 774, 1031, 1113
Bme18I GGWCC 2 cut(s) 407, 1109
BmeRI GACNNNNNGTC 2 cut(s) 537, 858
BmeT110I CYCGRG 1 cut(s) 910
BmgT120I GGNCC 2 cut(s) 407, 1109
BmiI GGNNCC 4 cut(s) 580, 900, 959, 1110
BmrFI CCNGG 4 cut(s) 285, 774, 1031, 1113
BmrI ACTGGG 1 cut(s) 956
BmsI GCATC 3 cut(s) 637, 703, 970
BmuI ACTGGG 1 cut(s) 956
BpmI CTGGAG 4 cut(s) 363, 597, 813, 1026
Bpu14I TTCGAA 1 cut(s) 1164
BpuEI CTTGAG 1 cut(s) 282
BpuMI CCSGG 2 cut(s) 285, 774
BsaI GGTCTC 1 cut(s) 545
BsaJI CCNNGG 3 cut(s) 78, 663, 953
BsaXI ACNNNNNCTCC 2 cut(s) 119, 149
Bsc4I CCNNNNNNNGG 1 cut(s) 290
Bse1I ACTGG 2 cut(s) 962, 1043
BseBI CCWGG 2 cut(s) 1031, 1113
BseDI CCNNGG 3 cut(s) 78, 663, 953
BseLI CCNNNNNNNGG 1 cut(s) 290
BseMII CTCAG 5 cut(s) 193, 233, 338, 556, 702
BseNI ACTGG 2 cut(s) 962, 1043
BseRI GAGGAG 5 cut(s) 85, 98, 127, 130, 636
BseXI GCAGC 9 cut(s) 350, 482, 625, 628, 637, 728, 910, 944, 1107
BshFI GGCC 1 cut(s) 83
BsiHKAI GWGCWC 1 cut(s) 298
BsiHKCI CYCGRG 1 cut(s) 910
BsiSI CCGG 3 cut(s) 58, 285, 773
BslFI GGGAC 1 cut(s) 1122
BslI CCNNNNNNNGG 1 cut(s) 290
BsmAI GTCTC 6 cut(s) 48, 211, 327, 545, 913, 1049
BsmBI CGTCTC 2 cut(s) 48, 211
BsmFI GGGAC 1 cut(s) 1122
BsnI GGCC 1 cut(s) 83
Bso31I GGTCTC 1 cut(s) 545
BsoBI CYCGRG 1 cut(s) 910
Bsp119I TTCGAA 1 cut(s) 1164
Bsp1286I GDGCHC 1 cut(s) 298
Bsp143I GATC 9 cut(s) 185, 215, 382, 753, 942, 957, 966, 997, 1008
Bsp19I CCATGG 2 cut(s) 78, 663
BspACI CCGC 5 cut(s) 75, 90, 168, 501, 537
BspANI GGCC 1 cut(s) 83
BspCNI CTCAG 5 cut(s) 192, 232, 337, 555, 701
BspLI GGNNCC 4 cut(s) 580, 900, 959, 1110
BspMAI CTGCAG 1 cut(s) 646
BspMI ACCTGC 1 cut(s) 863
BspPI GGATC 4 cut(s) 223, 952, 965, 992
BspT104I TTCGAA 1 cut(s) 1164
BspTNI GGTCTC 1 cut(s) 545
BsrI ACTGG 2 cut(s) 962, 1043
BssECI CCNNGG 3 cut(s) 78, 663, 953
BssMI GATC 9 cut(s) 185, 215, 382, 753, 942, 957, 966, 997, 1008
BssNAI GTATAC 1 cut(s) 558
BssT1I CCWWGG 2 cut(s) 78, 663
Bst1107I GTATAC 1 cut(s) 558
Bst2UI CCWGG 2 cut(s) 1031, 1113
Bst4CI ACNGT 5 cut(s) 20, 232, 433, 856, 1063
Bst6I CTCTTC 1 cut(s) 103
BstAPI GCANNNNNTGC 1 cut(s) 650
BstBI TTCGAA 1 cut(s) 1164
BstC8I GCNNGC 4 cut(s) 443, 447, 636, 1027
BstDEI CTNAG 9 cut(s) 179, 219, 324, 373, 542, 617, 654, 688, 831
BstDSI CCRYGG 2 cut(s) 78, 663
BstHHI GCGC 2 cut(s) 63, 1157
BstKTI GATC 9 cut(s) 188, 218, 385, 756, 945, 960, 969, 1000, 1011
BstMAI GTCTC 6 cut(s) 48, 211, 327, 545, 913, 1049
BstMBI GATC 9 cut(s) 185, 215, 382, 753, 942, 957, 966, 997, 1008
BstMWI GCNNNNNNNGC 8 cut(s) 10, 89, 635, 647, 650, 659, 929, 932
BstNI CCWGG 2 cut(s) 1031, 1113
BstSCI CCNGG 4 cut(s) 283, 772, 1029, 1111
BstSFI CTRYAG 1 cut(s) 642
BstV1I GCAGC 9 cut(s) 350, 482, 625, 628, 637, 728, 910, 944, 1107
BstX2I RGATCY 3 cut(s) 215, 957, 997
BstXI CCANNNNNNTGG 1 cut(s) 1050
BstYI RGATCY 3 cut(s) 215, 957, 997
BstZ17I GTATAC 1 cut(s) 558
BsuRI GGCC 1 cut(s) 83
BtgI CCRYGG 2 cut(s) 78, 663
BtsI GCAGTG 1 cut(s) 8
BtsIMutI CAGTG 3 cut(s) 8, 969, 1180
BveI ACCTGC 1 cut(s) 863
Cac8I GCNNGC 4 cut(s) 443, 447, 636, 1027
CaiI CAGNNNCTG 2 cut(s) 650, 791
CfoI GCGC 2 cut(s) 63, 1157
Cfr13I GGNCC 2 cut(s) 407, 1109
CseI GACGC 2 cut(s) 193, 848
Csp6I GTAC 2 cut(s) 21, 225
CviAII CATG 4 cut(s) 79, 664, 895, 992
CviQI GTAC 2 cut(s) 21, 225
DdeI CTNAG 9 cut(s) 179, 219, 324, 373, 542, 617, 654, 688, 831
DpnI GATC 9 cut(s) 187, 217, 384, 755, 944, 959, 968, 999, 1010
DpnII GATC 9 cut(s) 185, 215, 382, 753, 942, 957, 966, 997, 1008
DriI GACNNNNNGTC 2 cut(s) 537, 858
EaeI YGGCCR 1 cut(s) 81
Eam1104I CTCTTC 1 cut(s) 103
Eam1105I GACNNNNNGTC 2 cut(s) 537, 858
EarI CTCTTC 1 cut(s) 103
EciI GGCGGA 2 cut(s) 64, 516
Ecl136II GAGCTC 1 cut(s) 296
Eco130I CCWWGG 2 cut(s) 78, 663
Eco24I GRGCYC 1 cut(s) 298
Eco31I GGTCTC 1 cut(s) 545
Eco32I GATATC 1 cut(s) 370
Eco47I GGWCC 2 cut(s) 407, 1109
Eco53kI GAGCTC 1 cut(s) 296
Eco57I CTGAAG 2 cut(s) 568, 623
Eco88I CYCGRG 1 cut(s) 910
EcoICRI GAGCTC 1 cut(s) 296
EcoO109I RGGNCCY 1 cut(s) 1109
EcoRII CCWGG 2 cut(s) 1029, 1111
EcoRV GATATC 1 cut(s) 370
EcoT14I CCWWGG 2 cut(s) 78, 663
EcoT38I GRGCYC 1 cut(s) 298
ErhI CCWWGG 2 cut(s) 78, 663
Esp3I CGTCTC 2 cut(s) 48, 211
FaeI CATG 4 cut(s) 82, 667, 898, 995
FalI AAGNNNNNCTT 4 cut(s) 405, 437, 1058, 1090
FaqI GGGAC 1 cut(s) 1122
FatI CATG 4 cut(s) 78, 663, 894, 991
FblI GTMKAC 1 cut(s) 557
FriOI GRGCYC 1 cut(s) 298
FspBI CTAG 3 cut(s) 189, 863, 888
GlaI GCGC 2 cut(s) 62, 1156
GsuI CTGGAG 4 cut(s) 363, 597, 813, 1026
HaeIII GGCC 1 cut(s) 83
HapII CCGG 3 cut(s) 58, 285, 773
HgaI GACGC 2 cut(s) 193, 848
HhaI GCGC 2 cut(s) 63, 1157
Hin1II CATG 4 cut(s) 82, 667, 898, 995
Hin6I GCGC 2 cut(s) 61, 1155
HinP1I GCGC 2 cut(s) 61, 1155
HindIII AAGCTT 2 cut(s) 419, 605
HinfI GANTC 7 cut(s) 175, 239, 320, 425, 686, 807, 1069
HpaII CCGG 3 cut(s) 58, 285, 773
HphI GGTGA 2 cut(s) 8, 1045
Hpy166II GTNNAC 3 cut(s) 8, 235, 558
Hpy188I TCNGA 6 cut(s) 222, 327, 691, 753, 947, 954
Hpy8I GTNNAC 3 cut(s) 8, 235, 558
HpyAV CCTTC 3 cut(s) 123, 491, 592
HpyCH4III ACNGT 5 cut(s) 20, 232, 433, 856, 1063
HpyCH4V TGCA 9 cut(s) 634, 644, 716, 872, 926, 983, 995, 1025, 1127
HpyF10VI GCNNNNNNNGC 8 cut(s) 10, 89, 635, 647, 650, 659, 929, 932
HpyF3I CTNAG 9 cut(s) 179, 219, 324, 373, 542, 617, 654, 688, 831
Hsp92II CATG 4 cut(s) 82, 667, 898, 995
HspAI GCGC 2 cut(s) 61, 1155
Kzo9I GATC 9 cut(s) 185, 215, 382, 753, 942, 957, 966, 997, 1008
LmnI GCTCC 5 cut(s) 111, 293, 335, 489, 578
Lsp1109I GCAGC 9 cut(s) 350, 482, 625, 628, 637, 728, 910, 944, 1107
LweI GCATC 3 cut(s) 637, 703, 970
MaeI CTAG 3 cut(s) 189, 863, 888
MaeIII GTNAC 3 cut(s) 457, 529, 1033
MalI GATC 9 cut(s) 187, 217, 384, 755, 944, 959, 968, 999, 1010
MboI GATC 9 cut(s) 185, 215, 382, 753, 942, 957, 966, 997, 1008
MboII GAAGA 2 cut(s) 90, 1027
MflI RGATCY 3 cut(s) 215, 957, 997
MhlI GDGCHC 1 cut(s) 298
MlsI TGGCCA 1 cut(s) 83
MluCI AATT 6 cut(s) 479, 513, 760, 778, 1103, 1122
MluNI TGGCCA 1 cut(s) 83
MlyI GAGTC 3 cut(s) 329, 680, 1063
MmeI TCCRAC 2 cut(s) 313, 663
Mox20I TGGCCA 1 cut(s) 83
MroXI GAANNNNTTC 1 cut(s) 696
MscI TGGCCA 1 cut(s) 83
MseI TTAA 4 cut(s) 402, 516, 801, 1089
Msp20I TGGCCA 1 cut(s) 83
MspA1I CMGCKG 1 cut(s) 341
MspI CCGG 3 cut(s) 58, 285, 773
MspR9I CCNGG 4 cut(s) 285, 774, 1031, 1113
MvaI CCWGG 2 cut(s) 1031, 1113
MwoI GCNNNNNNNGC 8 cut(s) 10, 89, 635, 647, 650, 659, 929, 932
NciI CCSGG 2 cut(s) 285, 774
NcoI CCATGG 2 cut(s) 78, 663
NdeII GATC 9 cut(s) 185, 215, 382, 753, 942, 957, 966, 997, 1008
NlaIII CATG 4 cut(s) 82, 667, 898, 995
NlaIV GGNNCC 4 cut(s) 580, 900, 959, 1110
NmuCI GTSAC 3 cut(s) 457, 529, 1033
NspV TTCGAA 1 cut(s) 1164
PaeR7I CTCGAG 1 cut(s) 910
PaqCI CACCTGC 1 cut(s) 863
PdmI GAANNNNTTC 1 cut(s) 696
PfeI GAWTC 4 cut(s) 175, 239, 425, 807
PleI GAGTC 3 cut(s) 328, 680, 1063
PpsI GAGTC 3 cut(s) 328, 680, 1063
PpuMI RGGWCCY 1 cut(s) 1109
Psp124BI GAGCTC 1 cut(s) 298
Psp5II RGGWCCY 1 cut(s) 1109
Psp6I CCWGG 2 cut(s) 1029, 1111
PspGI CCWGG 2 cut(s) 1029, 1111
PspN4I GGNNCC 4 cut(s) 580, 900, 959, 1110
PspPI GGNCC 2 cut(s) 407, 1109
PspPPI RGGWCCY 1 cut(s) 1109
PstI CTGCAG 1 cut(s) 646
PstNI CAGNNNCTG 2 cut(s) 650, 791
PsuI RGATCY 3 cut(s) 215, 957, 997
PvuII CAGCTG 1 cut(s) 341
RsaI GTAC 2 cut(s) 22, 226
RsaNI GTAC 2 cut(s) 21, 225
SacI GAGCTC 1 cut(s) 298
SaqAI TTAA 4 cut(s) 402, 516, 801, 1089
Sau3AI GATC 9 cut(s) 185, 215, 382, 753, 942, 957, 966, 997, 1008
Sau96I GGNCC 2 cut(s) 407, 1109
ScaI AGTACT 1 cut(s) 226
SchI GAGTC 3 cut(s) 329, 680, 1063
ScrFI CCNGG 4 cut(s) 285, 774, 1031, 1113
SduI GDGCHC 1 cut(s) 298
SfaNI GCATC 3 cut(s) 637, 703, 970
SfcI CTRYAG 1 cut(s) 642
Sfr274I CTCGAG 1 cut(s) 910
SfuI TTCGAA 1 cut(s) 1164
SinI GGWCC 2 cut(s) 407, 1109
SlaI CTCGAG 1 cut(s) 910
SmlI CTYRAG 2 cut(s) 297, 910
SmoI CTYRAG 2 cut(s) 297, 910
SpeI ACTAGT 1 cut(s) 887
Sse9I AATT 6 cut(s) 479, 513, 760, 778, 1103, 1122
SsiI CCGC 5 cut(s) 75, 90, 168, 501, 537
SspMI CTAG 3 cut(s) 189, 863, 888
SstI GAGCTC 1 cut(s) 298
StyD4I CCNGG 4 cut(s) 283, 772, 1029, 1111
StyI CCWWGG 2 cut(s) 78, 663
TaaI ACNGT 5 cut(s) 20, 232, 433, 856, 1063
TaqI TCGA 6 cut(s) 591, 810, 911, 971, 978, 1164
TasI AATT 6 cut(s) 479, 513, 760, 778, 1103, 1122
TatI WGTACW 1 cut(s) 224
TauI GCSGC 1 cut(s) 170
TfiI GAWTC 4 cut(s) 175, 239, 425, 807
Tru1I TTAA 4 cut(s) 402, 516, 801, 1089
Tru9I TTAA 4 cut(s) 402, 516, 801, 1089
TscAI CASTG 3 cut(s) 15, 969, 1180
TseFI GTSAC 3 cut(s) 457, 529, 1033
TseI GCWGC 9 cut(s) 338, 470, 638, 641, 650, 716, 923, 932, 1095
Tsp45I GTSAC 3 cut(s) 457, 529, 1033
TspDTI ATGAA 2 cut(s) 750, 883
TspGWI ACGGA 2 cut(s) 30, 476
TspRI CASTG 3 cut(s) 15, 969, 1180
VpaK11BI GGWCC 2 cut(s) 407, 1109
XhoI CTCGAG 1 cut(s) 910
XmiI GTMKAC 1 cut(s) 557
XmnI GAANNNNTTC 1 cut(s) 696
XspI CTAG 3 cut(s) 189, 863, 888
ZrmI AGTACT 1 cut(s) 226
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.