MD11G1056800.v1.1

malonyl-CoA-acyl carrier protein transacylase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
4826465 .. 4837251
10787 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1056800.v1.1.491

Sequence Viewer

Length: 1164 bp
ATGCACACCTCCCTGAGGCTTAACCTCCCCCACCCTCTTATCCTACGCACCTCACTCGCCACCATGGCCGCCTCCATCGCCCTCCCCTCTTCCATTTCTCTCAACTCCTCCTCCTTCTCGGGGCTCCTGAATGGCGCCGGAGCCCAGCTCGGCGTCCGAAACCTCGGGCGATCTAGAGTTTCCATGGCCGCCTCCGTCGGATCGCAGACTCTGCAAAGCGACGCCTTGTTCGCCGATTACAAGCCCTCCTCTGCTTTCCTCTTCCCTGGCCAAGGTGCACAAGCAGTTGGAATGGGAAAGGAAGCTCAAAGTGTTCCTGCTGCAGCAGAGTTATACAAGAAAGCAAACGATATTTTAGGGTTTGATCTTTTGGATGTTTGTATCAATGGACCAAAAGAGAAGCTAGATTCAACTGTTATAAGCCAGCCTGCTATTTACGTCACAAGTCTAGCTGCTGTTGAGTTACTACGTGCACGTGATGGAGGTCAGCTGATCATTGATTCAGTTGATGTCACGTGCGGCCTAAGTTTGGGAGAATATACTGCTCTAGCATTTGCTGAGTCATTCAGCTTTGAGGATGGGCTCAAGCTGGTCAAACTGAGGGGAGAAGCTATGCAGGCAGCTGCTGATGCTGCCAAAAGTGCCATGGTCAGTGTCATCGGGTTGGACTCAGACAAGGTGCAACAGTTGTGTGATGCAGCCAATGCAGAAGTTGATGACGCTGACAAAGTTCAGATTGCAAATTATCTATGCACTGGAAATTATGCTGTTTCTGGTGGTGTGAAAGGAATTGAAGCAGTAGAGGCTAAGGCAAAGTCATTCAAGGCCCGAATGACGGTGCGTCTAGCTGTTGCTGGCGCTTTCCACACTAGTTTTATGGAACCGGCCGTGTCAAGATTGGAAGCCAAGTTGGCAGAAACACAGATCAGAACACCAAGAATACCAGTTATCTCCAACGTTGACGCACAGCCACATTCAGATCCTGAGACAATTAAGAAGATATTGGCTCGTCAGGTGACTTCTCCTGTTCAATGGGAAACAACTGTCAAGACTCTGCTCGGCAAGGGGCTGAAGAAGAGTTACGAATTGGGCCCCGGAAAGGTTATAGCCGGCATTGTGAAGAGAATGGAGAGAAGTGCTGACATTGAGAACATTGCCGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

388

Amino Acids

40.72

Weight (kDa)

7.63

Isoelectric Point (pI)

31.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acyl_transf_1 PF00698 86 - 371 7.3e-26 Acyl transferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012502)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 419
AccB1I GGYRCC 1 cut(s) 134
AciI CCGC 4 cut(s) 69, 189, 519, 1158
AclI AACGTT 1 cut(s) 957
AclWI GGATC 2 cut(s) 208, 974
AcoI YGGCCR 4 cut(s) 66, 186, 268, 885
AcuI CTGAAG 1 cut(s) 1091
AcvI CACGTG 2 cut(s) 476, 516
AcyI GRCGYC 3 cut(s) 135, 153, 222
AfiI CCNNNNNNNGG 6 cut(s) 15, 120, 272, 529, 835, 1099
AgsI TTSAA 4 cut(s) 411, 794, 823, 1031
AhdI GACNNNNNGTC 1 cut(s) 840
AhlI ACTAGT 1 cut(s) 869
AjnI CCWGG 1 cut(s) 265
Alw21I GWGCWC 2 cut(s) 280, 475
Alw26I GTCTC 1 cut(s) 980
Alw44I GTGCAC 2 cut(s) 276, 471
AlwI GGATC 2 cut(s) 208, 974
AlwNI CAGNNNCTG 3 cut(s) 211, 626, 983
Ama87I CYCGRG 2 cut(s) 118, 164
AoxI GGCC 7 cut(s) 66, 186, 268, 520, 825, 885, 1090
ApaI GGGCCC 1 cut(s) 1094
ApaLI GTGCAC 2 cut(s) 276, 471
ApeKI GCWGC 7 cut(s) 320, 323, 452, 620, 623, 632, 698
ArsI GACNNNNNNTTYG 2 cut(s) 212, 244
AspLEI GCGC 2 cut(s) 137, 860
AspS9I GGNCC 4 cut(s) 389, 826, 1090, 1091
AsuC2I CCSGG 1 cut(s) 1095
AsuHPI GGTGA 1 cut(s) 1027
AvaI CYCGRG 2 cut(s) 118, 164
AvaII GGWCC 1 cut(s) 389
AxyI CCTNAGG 1 cut(s) 14
BaeGI GKGCMC 3 cut(s) 280, 475, 1094
BalI TGGCCA 1 cut(s) 270
BanI GGYRCC 1 cut(s) 134
BanII GRGCYC 4 cut(s) 126, 145, 585, 1094
BarI GAAGNNNNNNTAC 2 cut(s) 1064, 1096
BbrPI CACGTG 2 cut(s) 476, 516
Bbv12I GWGCWC 2 cut(s) 280, 475
BbvI GCAGC 7 cut(s) 307, 335, 439, 610, 619, 632, 710
BccI CCATC 3 cut(s) 83, 473, 572
BceAI ACGGC 1 cut(s) 872
BcgI CGANNNNNNTGC 2 cut(s) 37, 71
BciT130I CCWGG 1 cut(s) 267
BclI TGATCA 1 cut(s) 492
BcnI CCSGG 1 cut(s) 1095
BcoDI GTCTC 1 cut(s) 980
BcuI ACTAGT 1 cut(s) 869
BfaI CTAG 6 cut(s) 174, 404, 449, 548, 845, 870
BfmI CTRYAG 1 cut(s) 321
BfoI RGCGCY 2 cut(s) 138, 861
BglI GCCNNNNNGGC 2 cut(s) 65, 911
Bme1390I CCNGG 2 cut(s) 267, 1095
Bme18I GGWCC 1 cut(s) 389
BmeRI GACNNNNNGTC 1 cut(s) 840
BmeT110I CYCGRG 2 cut(s) 118, 164
BmgT120I GGNCC 4 cut(s) 389, 826, 1090, 1091
BmiI GGNNCC 6 cut(s) 125, 136, 142, 882, 1092, 1093
BmrFI CCNGG 2 cut(s) 267, 1095
BmsI GCATC 2 cut(s) 619, 685
BplI GAGNNNNNCTC 2 cut(s) 132, 164
Bpu10I CCTNAGC 1 cut(s) 807
BpuEI CTTGAG 1 cut(s) 569
BpuMI CCSGG 1 cut(s) 1095
BsaAI YACGTR 3 cut(s) 470, 476, 516
BsaHI GRCGYC 3 cut(s) 135, 153, 222
BsaJI CCNNGG 7 cut(s) 63, 163, 183, 265, 271, 645, 1093
BsaXI ACNNNNNCTCC 4 cut(s) 95, 125, 230, 260
Bsc4I CCNNNNNNNGG 6 cut(s) 15, 120, 272, 529, 835, 1099
Bse118I RCCGGY 2 cut(s) 883, 1109
Bse1I ACTGG 2 cut(s) 760, 944
Bse21I CCTNAGG 1 cut(s) 14
Bse3DI GCAATG 1 cut(s) 1152
BseBI CCWGG 1 cut(s) 267
BseDI CCNNGG 7 cut(s) 63, 163, 183, 265, 271, 645, 1093
BseGI GGATG 2 cut(s) 379, 583
BseLI CCNNNNNNNGG 6 cut(s) 15, 120, 272, 529, 835, 1099
BseMI GCAATG 1 cut(s) 1152
BseMII CTCAG 5 cut(s) 5, 549, 590, 684, 975
BseNI ACTGG 2 cut(s) 760, 944
BseRI GAGGAG 3 cut(s) 97, 100, 238
BseSI GKGCMC 3 cut(s) 280, 475, 1094
BseX3I CGGCCG 1 cut(s) 885
BseXI GCAGC 7 cut(s) 307, 335, 439, 610, 619, 632, 710
BseYI CCCAGC 1 cut(s) 144
Bsh1285I CGRYCG 1 cut(s) 888
BshFI GGCC 7 cut(s) 68, 188, 270, 522, 827, 887, 1092
BshNI GGYRCC 1 cut(s) 134
BsiEI CGRYCG 1 cut(s) 888
BsiHKAI GWGCWC 2 cut(s) 280, 475
BsiHKCI CYCGRG 2 cut(s) 118, 164
BsiSI CCGG 4 cut(s) 138, 884, 1095, 1110
BslI CCNNNNNNNGG 6 cut(s) 15, 120, 272, 529, 835, 1099
BsmAI GTCTC 1 cut(s) 980
BsnI GGCC 7 cut(s) 68, 188, 270, 522, 827, 887, 1092
BsoBI CYCGRG 2 cut(s) 118, 164
Bsp120I GGGCCC 1 cut(s) 1090
Bsp1286I GDGCHC 6 cut(s) 126, 145, 280, 475, 585, 1094
Bsp143I GATC 6 cut(s) 170, 200, 364, 492, 924, 979
Bsp19I CCATGG 3 cut(s) 63, 183, 645
BspACI CCGC 4 cut(s) 69, 189, 519, 1158
BspANI GGCC 7 cut(s) 68, 188, 270, 522, 827, 887, 1092
BspCNI CTCAG 5 cut(s) 6, 550, 591, 683, 976
BspLI GGNNCC 6 cut(s) 125, 136, 142, 882, 1092, 1093
BspMAI CTGCAG 1 cut(s) 325
BspPI GGATC 2 cut(s) 208, 974
BspT107I GGYRCC 1 cut(s) 134
BsrDI GCAATG 1 cut(s) 1152
BsrFI RCCGGY 2 cut(s) 883, 1109
BsrI ACTGG 2 cut(s) 760, 944
BssAI RCCGGY 2 cut(s) 883, 1109
BssECI CCNNGG 7 cut(s) 63, 163, 183, 265, 271, 645, 1093
BssMI GATC 6 cut(s) 170, 200, 364, 492, 924, 979
BssNI GRCGYC 3 cut(s) 135, 153, 222
BssT1I CCWWGG 4 cut(s) 63, 183, 271, 645
Bst2UI CCWGG 1 cut(s) 267
Bst4CI ACNGT 4 cut(s) 415, 687, 838, 1045
Bst6I CTCTTC 4 cut(s) 94, 266, 1070, 1115
BstACI GRCGYC 3 cut(s) 135, 153, 222
BstAPI GCANNNNNTGC 2 cut(s) 211, 704
BstBAI YACGTR 3 cut(s) 470, 476, 516
BstC8I GCNNGC 5 cut(s) 425, 429, 618, 856, 1111
BstDEI CTNAG 7 cut(s) 14, 524, 558, 599, 670, 807, 984
BstDSI CCRYGG 3 cut(s) 63, 183, 645
BstENI CCTNNNNNAGG 2 cut(s) 13, 270
BstF5I GGATG 2 cut(s) 379, 583
BstH2I RGCGCY 2 cut(s) 138, 861
BstHHI GCGC 2 cut(s) 137, 860
BstKTI GATC 6 cut(s) 173, 203, 367, 495, 927, 982
BstMAI GTCTC 1 cut(s) 980
BstMBI GATC 6 cut(s) 170, 200, 364, 492, 924, 979
BstMCI CGRYCG 1 cut(s) 888
BstNI CCWGG 1 cut(s) 267
BstSCI CCNGG 2 cut(s) 265, 1093
BstSFI CTRYAG 1 cut(s) 321
BstSLI GKGCMC 3 cut(s) 280, 475, 1094
BstV1I GCAGC 7 cut(s) 307, 335, 439, 610, 619, 632, 710
BstX2I RGATCY 1 cut(s) 979
BstYI RGATCY 1 cut(s) 979
BstZI CGGCCG 1 cut(s) 885
Bsu36I CCTNAGG 1 cut(s) 14
BsuRI GGCC 7 cut(s) 68, 188, 270, 522, 827, 887, 1092
BtgI CCRYGG 3 cut(s) 63, 183, 645
BtgZI GCGATG 1 cut(s) 61
BtsCI GGATG 2 cut(s) 379, 583
BtsIMutI CAGTG 2 cut(s) 658, 753
Cac8I GCNNGC 5 cut(s) 425, 429, 618, 856, 1111
CaiI CAGNNNCTG 3 cut(s) 211, 626, 983
CfoI GCGC 2 cut(s) 137, 860
Cfr10I RCCGGY 2 cut(s) 883, 1109
Cfr13I GGNCC 4 cut(s) 389, 826, 1090, 1091
CseI GACGC 5 cut(s) 142, 230, 728, 830, 971
CviAII CATG 3 cut(s) 64, 184, 646
DdeI CTNAG 7 cut(s) 14, 524, 558, 599, 670, 807, 984
DinI GGCGCC 1 cut(s) 136
DpnI GATC 6 cut(s) 172, 202, 366, 494, 926, 981
DpnII GATC 6 cut(s) 170, 200, 364, 492, 924, 979
DriI GACNNNNNGTC 1 cut(s) 840
EaeI YGGCCR 4 cut(s) 66, 186, 268, 885
EagI CGGCCG 1 cut(s) 885
Eam1104I CTCTTC 4 cut(s) 94, 266, 1070, 1115
Eam1105I GACNNNNNGTC 1 cut(s) 840
EarI CTCTTC 4 cut(s) 94, 266, 1070, 1115
EclXI CGGCCG 1 cut(s) 885
Eco130I CCWWGG 4 cut(s) 63, 183, 271, 645
Eco24I GRGCYC 4 cut(s) 126, 145, 585, 1094
Eco47I GGWCC 1 cut(s) 389
Eco52I CGGCCG 1 cut(s) 885
Eco57I CTGAAG 1 cut(s) 1091
Eco72I CACGTG 2 cut(s) 476, 516
Eco81I CCTNAGG 1 cut(s) 14
Eco88I CYCGRG 2 cut(s) 118, 164
EcoNI CCTNNNNNAGG 2 cut(s) 13, 270
EcoO109I RGGNCCY 1 cut(s) 1091
EcoRII CCWGG 1 cut(s) 265
EcoT14I CCWWGG 4 cut(s) 63, 183, 271, 645
EcoT38I GRGCYC 4 cut(s) 126, 145, 585, 1094
EgeI GGCGCC 1 cut(s) 136
EheI GGCGCC 1 cut(s) 136
ErhI CCWWGG 4 cut(s) 63, 183, 271, 645
FaeI CATG 3 cut(s) 67, 187, 649
FatI CATG 3 cut(s) 63, 183, 645
FbaI TGATCA 1 cut(s) 492
FokI GGATG 2 cut(s) 386, 590
FriOI GRGCYC 4 cut(s) 126, 145, 585, 1094
FspBI CTAG 6 cut(s) 174, 404, 449, 548, 845, 870
GlaI GCGC 2 cut(s) 136, 859
GsaI CCCAGC 1 cut(s) 148
HaeII RGCGCY 2 cut(s) 138, 861
HaeIII GGCC 7 cut(s) 68, 188, 270, 522, 827, 887, 1092
HapII CCGG 4 cut(s) 138, 884, 1095, 1110
HgaI GACGC 5 cut(s) 142, 230, 728, 830, 971
HhaI GCGC 2 cut(s) 137, 860
Hin1I GRCGYC 3 cut(s) 135, 153, 222
Hin1II CATG 3 cut(s) 67, 187, 649
Hin6I GCGC 2 cut(s) 135, 858
HinP1I GCGC 2 cut(s) 135, 858
HincII GTYRAC 1 cut(s) 961
HindII GTYRAC 1 cut(s) 961
HinfI GANTC 6 cut(s) 208, 407, 500, 560, 668, 1051
HpaII CCGG 4 cut(s) 138, 884, 1095, 1110
HphI GGTGA 1 cut(s) 1027
Hpy166II GTNNAC 3 cut(s) 278, 473, 961
Hpy188I TCNGA 6 cut(s) 158, 200, 673, 735, 929, 979
Hpy188III TCNNGA 5 cut(s) 127, 174, 894, 983, 1048
Hpy8I GTNNAC 3 cut(s) 278, 473, 961
Hpy99I CGWCG 2 cut(s) 200, 224
HpyAV CCTTC 1 cut(s) 124
HpyCH4III ACNGT 4 cut(s) 415, 687, 838, 1045
HpyCH4IV ACGT 5 cut(s) 438, 469, 475, 515, 957
HpyF3I CTNAG 7 cut(s) 14, 524, 558, 599, 670, 807, 984
HpySE526I ACGT 5 cut(s) 438, 469, 475, 515, 957
Hsp92I GRCGYC 3 cut(s) 135, 153, 222
Hsp92II CATG 3 cut(s) 67, 187, 649
HspAI GCGC 2 cut(s) 135, 858
KasI GGCGCC 1 cut(s) 134
KroI GCCGGC 1 cut(s) 1109
KroNI GCCGGC 1 cut(s) 1111
Ksp22I TGATCA 1 cut(s) 492
Kzo9I GATC 6 cut(s) 170, 200, 364, 492, 924, 979
LmnI GCTCC 2 cut(s) 129, 140
Lsp1109I GCAGC 7 cut(s) 307, 335, 439, 610, 619, 632, 710
LweI GCATC 2 cut(s) 619, 685
MaeI CTAG 6 cut(s) 174, 404, 449, 548, 845, 870
MaeII ACGT 5 cut(s) 438, 469, 475, 515, 957
MaeIII GTNAC 5 cut(s) 439, 462, 511, 1015, 1079
MalI GATC 6 cut(s) 172, 202, 366, 494, 926, 981
MboI GATC 6 cut(s) 170, 200, 364, 492, 924, 979
MboII GAAGA 6 cut(s) 81, 253, 1009, 1084, 1087, 1132
MflI RGATCY 1 cut(s) 979
MhlI GDGCHC 6 cut(s) 126, 145, 280, 475, 585, 1094
MlsI TGGCCA 1 cut(s) 270
MluCI AATT 5 cut(s) 742, 760, 789, 990, 1085
MluNI TGGCCA 1 cut(s) 270
Mly113I GGCGCC 1 cut(s) 135
MlyI GAGTC 4 cut(s) 202, 569, 662, 1045
MmeI TCCRAC 4 cut(s) 178, 268, 645, 978
Mox20I TGGCCA 1 cut(s) 270
MroNI GCCGGC 1 cut(s) 1109
MscI TGGCCA 1 cut(s) 270
MseI TTAA 2 cut(s) 21, 993
Msp20I TGGCCA 1 cut(s) 270
MspA1I CMGCKG 2 cut(s) 490, 623
MspI CCGG 4 cut(s) 138, 884, 1095, 1110
MspR9I CCNGG 2 cut(s) 267, 1095
MvaI CCWGG 1 cut(s) 267
NaeI GCCGGC 1 cut(s) 1111
NarI GGCGCC 1 cut(s) 135
NciI CCSGG 1 cut(s) 1095
NcoI CCATGG 3 cut(s) 63, 183, 645
NdeII GATC 6 cut(s) 170, 200, 364, 492, 924, 979
NgoMIV GCCGGC 1 cut(s) 1109
NlaIII CATG 3 cut(s) 67, 187, 649
NlaIV GGNNCC 6 cut(s) 125, 136, 142, 882, 1092, 1093
NmeAIII GCCGAG 2 cut(s) 129, 1038
NmuCI GTSAC 3 cut(s) 439, 511, 1015
PdiI GCCGGC 1 cut(s) 1111
PfeI GAWTC 2 cut(s) 407, 500
PleI GAGTC 4 cut(s) 202, 568, 662, 1045
PluTI GGCGCC 1 cut(s) 138
PmaCI CACGTG 2 cut(s) 476, 516
PmlI CACGTG 2 cut(s) 476, 516
PpsI GAGTC 4 cut(s) 202, 568, 662, 1045
Ppu21I YACGTR 3 cut(s) 470, 476, 516
PsiI TTATAA 1 cut(s) 419
Psp1406I AACGTT 1 cut(s) 957
Psp6I CCWGG 1 cut(s) 265
PspCI CACGTG 2 cut(s) 476, 516
PspFI CCCAGC 1 cut(s) 144
PspGI CCWGG 1 cut(s) 265
PspN4I GGNNCC 6 cut(s) 125, 136, 142, 882, 1092, 1093
PspOMI GGGCCC 1 cut(s) 1090
PspPI GGNCC 4 cut(s) 389, 826, 1090, 1091
PstI CTGCAG 1 cut(s) 325
PstNI CAGNNNCTG 3 cut(s) 211, 626, 983
PsuI RGATCY 1 cut(s) 979
PvuII CAGCTG 2 cut(s) 490, 623
SaqAI TTAA 2 cut(s) 21, 993
Sau3AI GATC 6 cut(s) 170, 200, 364, 492, 924, 979
Sau96I GGNCC 4 cut(s) 389, 826, 1090, 1091
SchI GAGTC 4 cut(s) 202, 569, 662, 1045
ScrFI CCNGG 2 cut(s) 267, 1095
SduI GDGCHC 6 cut(s) 126, 145, 280, 475, 585, 1094
SfaNI GCATC 2 cut(s) 619, 685
SfcI CTRYAG 1 cut(s) 321
SfoI GGCGCC 1 cut(s) 136
SinI GGWCC 1 cut(s) 389
SmlI CTYRAG 1 cut(s) 584
SmoI CTYRAG 1 cut(s) 584
SpeI ACTAGT 1 cut(s) 869
Sse9I AATT 5 cut(s) 742, 760, 789, 990, 1085
SsiI CCGC 4 cut(s) 69, 189, 519, 1158
SspDI GGCGCC 1 cut(s) 134
SspMI CTAG 6 cut(s) 174, 404, 449, 548, 845, 870
StyD4I CCNGG 2 cut(s) 265, 1093
StyI CCWWGG 4 cut(s) 63, 183, 271, 645
TaaI ACNGT 4 cut(s) 415, 687, 838, 1045
TaiI ACGT 5 cut(s) 441, 472, 478, 518, 960
TasI AATT 5 cut(s) 742, 760, 789, 990, 1085
TauI GCSGC 4 cut(s) 71, 191, 522, 1160
TfiI GAWTC 2 cut(s) 407, 500
Tru1I TTAA 2 cut(s) 21, 993
Tru9I TTAA 2 cut(s) 21, 993
TscAI CASTG 2 cut(s) 658, 760
TseFI GTSAC 3 cut(s) 439, 511, 1015
TseI GCWGC 7 cut(s) 320, 323, 452, 620, 623, 632, 698
Tsp45I GTSAC 3 cut(s) 439, 511, 1015
TspGWI ACGGA 1 cut(s) 184
TspRI CASTG 2 cut(s) 658, 760
VneI GTGCAC 2 cut(s) 276, 471
VpaK11BI GGWCC 1 cut(s) 389
XagI CCTNNNNNAGG 2 cut(s) 13, 270
XbaI TCTAGA 1 cut(s) 173
XcmI CCANNNNNNNNNTGG 1 cut(s) 643
XspI CTAG 6 cut(s) 174, 404, 449, 548, 845, 870
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.