Prupe.6G048900_v2.0.a1

malonyl-CoA-acyl carrier protein transacylase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
3492483 .. 3495411
2929 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G048900.1

Sequence Viewer

Length: 1161 bp
ATGCACACCTTCCTCAGGCTTAACCTTCACCACCCTCTTATCCTGCTCACCTCCCTCCCCACCATGACCGCCTCTCTCGCCCTCTCCTCCATTTCTCTCAACTCCTCCTTCGTTTCGGGGCTCCGAAATGGAAAAGGAGCCCCGCTCGGTATCCGGAGCCTCGGGCGATCTAGGGTTTCCATGACCGCCTCCGTTGGATCGCAGACTCTGCAAAGCGATGCCTTGTTCGCTGATTACAATTCCAACTTCGCTTTCCTCTTCCCTGGTCAAGGTGCGCAAGCAGTTGGAATGGGAAGGGAAGCTCAAAGCGTGCCTGCTGCTGCGGAGTTATACAAGAAAGCAAACGATATTTTAGGGTTTGATCTTTTGGATGTTTGTATCAATGGGCCAAAAGAGAAGCTAGATTCAACTGTTATAAGCCAGCCAGCTATTTATGTCACAAGTCTAGCTGCTGTTGAGTTACTTCGTGCACGTGATGGAGGCCAGCAGATCATTGATTCTGTTGATGTCACATGTGGCCTAAGTTTGGGAGAATATACTGCTCTAGCATTTGCTGGGTCATTCAGCTTTGAGGATGGGCTCAACCTGGTCAAACTGAGGGGAGAAGCCATGCAGGAAGCTGCCGATGCTGCCAAAAGTGCCATGGTCAGTGTCATAGGGTTGGACTCAGACAAGGTTCAACAGTTGTGTGATGCAGCCAATCAAGAAGTCGATGATGCTAACAAAGTTCAGATTGCAAATTATCTATGTACTGGCAATTATGCTGTATCTGGTGGTGTGAAAGGAGTAGAAGCAGTAGAGGCCAAAGCAAAGTCATTCAAGGCCCGAATGACGGTTCGACTAGCTGTTGCTGGCGCTTTCCACACTAGTTTTATGGAACCTGCTGTATCAAGATTGGAAGCTAAATTGGCAGCAACGCAAATCAGAACACCAAGAATACCAGTTATCTCCAATGTTGACGCACAACCACACTCAGATCCCGAGACAATTAAGAAAATATTGGCTCGTCAGGTGACTTCCCCTGTTCAATGGGAAACGACTGTCAAGACTCTCCTTAGCAAGGGGCTGAAGAAGAGCTACGAATTGGGACCTGGAAAGGTTATAGCTGGCATTGTGAAGAGAATGGAGAGAAGTGCAGAGATTGAGAACATTGCCGCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

387

Amino Acids

40.94

Weight (kDa)

8.24

Isoelectric Point (pI)

31.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012502)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 416
Acc16I TGCGCA 1 cut(s) 276
Acc36I ACCTGC 1 cut(s) 889
AccBSI CCGCTC 1 cut(s) 145
AccII CGCG 1 cut(s) 1157
AccIII TCCGGA 1 cut(s) 153
AciI CCGC 5 cut(s) 69, 143, 186, 323, 1155
AclWI GGATC 2 cut(s) 205, 971
AcuI CTGAAG 1 cut(s) 1088
AcvI CACGTG 1 cut(s) 473
AfaI GTAC 1 cut(s) 751
AfiI CCNNNNNNNGG 5 cut(s) 15, 269, 526, 832, 1060
AflIII ACRYGT 1 cut(s) 512
AgsI TTSAA 4 cut(s) 408, 680, 820, 1028
AhlI ACTAGT 1 cut(s) 866
AjnI CCWGG 3 cut(s) 262, 585, 1090
AjuI GAANNNNNNNTTGG 2 cut(s) 236, 268
Alw21I GWGCWC 1 cut(s) 472
Alw26I GTCTC 1 cut(s) 977
Alw44I GTGCAC 1 cut(s) 468
AlwI GGATC 2 cut(s) 205, 971
AlwNI CAGNNNCTG 1 cut(s) 208
Ama87I CYCGRG 2 cut(s) 161, 980
Aor13HI TCCGGA 1 cut(s) 153
AoxI GGCC 5 cut(s) 386, 481, 517, 801, 822
ApaLI GTGCAC 1 cut(s) 468
ApeKI GCWGC 7 cut(s) 317, 320, 449, 620, 629, 695, 911
AspLEI GCGC 2 cut(s) 277, 857
AspS9I GGNCC 3 cut(s) 386, 823, 1088
AsuHPI GGTGA 3 cut(s) 20, 40, 1024
AvaI CYCGRG 2 cut(s) 161, 980
AvaII GGWCC 1 cut(s) 1088
AxyI CCTNAGG 1 cut(s) 14
BaeGI GKGCMC 1 cut(s) 472
BanII GRGCYC 3 cut(s) 123, 142, 582
BarI GAAGNNNNNNTAC 2 cut(s) 1061, 1093
BbrPI CACGTG 1 cut(s) 473
Bbv12I GWGCWC 1 cut(s) 472
BbvI GCAGC 7 cut(s) 304, 307, 436, 607, 616, 707, 923
BccI CCATC 2 cut(s) 470, 569
BciT130I CCWGG 3 cut(s) 264, 587, 1092
BciVI GTATCC 1 cut(s) 161
BcoDI GTCTC 1 cut(s) 977
BcuI ACTAGT 1 cut(s) 866
BfaI CTAG 6 cut(s) 171, 401, 446, 545, 842, 867
BfoI RGCGCY 1 cut(s) 858
BfuAI ACCTGC 1 cut(s) 889
BfuI GTATCC 1 cut(s) 161
BisI GCNGC 8 cut(s) 318, 321, 450, 621, 630, 696, 912, 1155
BlsI GCNGC 8 cut(s) 319, 322, 451, 622, 631, 697, 913, 1156
Bme1390I CCNGG 3 cut(s) 264, 587, 1092
Bme18I GGWCC 1 cut(s) 1088
BmeT110I CYCGRG 2 cut(s) 161, 980
BmgT120I GGNCC 3 cut(s) 386, 823, 1088
BmiI GGNNCC 5 cut(s) 122, 139, 158, 879, 1089
BmrFI CCNGG 3 cut(s) 264, 587, 1092
BmsI GCATC 4 cut(s) 208, 616, 682, 706
BplI GAGNNNNNCTC 2 cut(s) 129, 161
Bpu10I CCTNAGC 1 cut(s) 1055
BsaAI YACGTR 1 cut(s) 473
BsaJI CCNNGG 3 cut(s) 160, 262, 642
BsaWI WCCGGW 1 cut(s) 153
Bsc4I CCNNNNNNNGG 5 cut(s) 15, 269, 526, 832, 1060
Bse1I ACTGG 2 cut(s) 757, 941
Bse21I CCTNAGG 1 cut(s) 14
Bse3DI GCAATG 1 cut(s) 1149
BseAI TCCGGA 1 cut(s) 153
BseBI CCWGG 3 cut(s) 264, 587, 1092
BseDI CCNNGG 3 cut(s) 160, 262, 642
BseGI GGATG 2 cut(s) 376, 580
BseLI CCNNNNNNNGG 5 cut(s) 15, 269, 526, 832, 1060
BseMI GCAATG 1 cut(s) 1149
BseMII CTCAG 4 cut(s) 28, 587, 681, 987
BseNI ACTGG 2 cut(s) 757, 941
BseRI GAGGAG 2 cut(s) 76, 94
BseSI GKGCMC 1 cut(s) 472
BseXI GCAGC 7 cut(s) 304, 307, 436, 607, 616, 707, 923
BseYI CCCAGC 1 cut(s) 554
BsgI GTGCAG 1 cut(s) 1155
Bsh1236I CGCG 1 cut(s) 1157
BshFI GGCC 5 cut(s) 388, 483, 519, 803, 824
BsiHKAI GWGCWC 1 cut(s) 472
BsiHKCI CYCGRG 2 cut(s) 161, 980
BsiSI CCGG 1 cut(s) 154
BslFI GGGAC 1 cut(s) 1101
BslI CCNNNNNNNGG 5 cut(s) 15, 269, 526, 832, 1060
BsmAI GTCTC 1 cut(s) 977
BsmFI GGGAC 1 cut(s) 1101
BsnI GGCC 5 cut(s) 388, 483, 519, 803, 824
BsoBI CYCGRG 2 cut(s) 161, 980
Bsp1286I GDGCHC 4 cut(s) 123, 142, 472, 582
Bsp13I TCCGGA 1 cut(s) 153
Bsp143I GATC 5 cut(s) 167, 197, 361, 489, 976
Bsp19I CCATGG 1 cut(s) 642
BspACI CCGC 5 cut(s) 69, 143, 186, 323, 1155
BspANI GGCC 5 cut(s) 388, 483, 519, 803, 824
BspCNI CTCAG 4 cut(s) 27, 588, 680, 986
BspEI TCCGGA 1 cut(s) 153
BspFNI CGCG 1 cut(s) 1157
BspLI GGNNCC 5 cut(s) 122, 139, 158, 879, 1089
BspMI ACCTGC 1 cut(s) 889
BspPI GGATC 2 cut(s) 205, 971
BspQI GCTCTTC 1 cut(s) 1067
BsrBI CCGCTC 1 cut(s) 145
BsrDI GCAATG 1 cut(s) 1149
BsrI ACTGG 2 cut(s) 757, 941
BssECI CCNNGG 3 cut(s) 160, 262, 642
BssMI GATC 5 cut(s) 167, 197, 361, 489, 976
BssT1I CCWWGG 1 cut(s) 642
Bst2UI CCWGG 3 cut(s) 264, 587, 1092
Bst4CI ACNGT 4 cut(s) 412, 684, 835, 1042
Bst6I CTCTTC 3 cut(s) 263, 1067, 1112
BstAPI GCANNNNNTGC 1 cut(s) 208
BstBAI YACGTR 1 cut(s) 473
BstC8I GCNNGC 8 cut(s) 279, 311, 315, 422, 426, 485, 853, 1108
BstDEI CTNAG 6 cut(s) 14, 521, 596, 667, 973, 1055
BstDSI CCRYGG 1 cut(s) 642
BstENI CCTNNNNNAGG 3 cut(s) 13, 267, 1058
BstF5I GGATG 2 cut(s) 376, 580
BstFNI CGCG 1 cut(s) 1157
BstH2I RGCGCY 1 cut(s) 858
BstHHI GCGC 2 cut(s) 277, 857
BstKTI GATC 5 cut(s) 170, 200, 364, 492, 979
BstMAI GTCTC 1 cut(s) 977
BstMBI GATC 5 cut(s) 167, 197, 361, 489, 976
BstMWI GCNNNNNNNGC 8 cut(s) 77, 208, 227, 626, 629, 638, 800, 908
BstNI CCWGG 3 cut(s) 264, 587, 1092
BstNSI RCATGY 1 cut(s) 516
BstSCI CCNGG 3 cut(s) 262, 585, 1090
BstSLI GKGCMC 1 cut(s) 472
BstUI CGCG 1 cut(s) 1157
BstV1I GCAGC 7 cut(s) 304, 307, 436, 607, 616, 707, 923
BstX2I RGATCY 1 cut(s) 976
BstYI RGATCY 1 cut(s) 976
Bsu36I CCTNAGG 1 cut(s) 14
BsuI GTATCC 1 cut(s) 161
BsuRI GGCC 5 cut(s) 388, 483, 519, 803, 824
BtgI CCRYGG 1 cut(s) 642
BtgZI GCGATG 1 cut(s) 231
BtsCI GGATG 2 cut(s) 376, 580
BtsIMutI CAGTG 1 cut(s) 655
BveI ACCTGC 1 cut(s) 889
Cac8I GCNNGC 8 cut(s) 279, 311, 315, 422, 426, 485, 853, 1108
CaiI CAGNNNCTG 1 cut(s) 208
CfoI GCGC 2 cut(s) 277, 857
Cfr13I GGNCC 3 cut(s) 386, 823, 1088
CseI GACGC 1 cut(s) 968
CsiI ACCWGGT 1 cut(s) 585
Csp6I GTAC 1 cut(s) 750
CviAII CATG 5 cut(s) 64, 181, 513, 610, 643
CviQI GTAC 1 cut(s) 750
DdeI CTNAG 6 cut(s) 14, 521, 596, 667, 973, 1055
DpnI GATC 5 cut(s) 169, 199, 363, 491, 978
DpnII GATC 5 cut(s) 167, 197, 361, 489, 976
Eam1104I CTCTTC 3 cut(s) 263, 1067, 1112
EarI CTCTTC 3 cut(s) 263, 1067, 1112
Eco130I CCWWGG 1 cut(s) 642
Eco24I GRGCYC 3 cut(s) 123, 142, 582
Eco47I GGWCC 1 cut(s) 1088
Eco57I CTGAAG 1 cut(s) 1088
Eco72I CACGTG 1 cut(s) 473
Eco81I CCTNAGG 1 cut(s) 14
Eco88I CYCGRG 2 cut(s) 161, 980
EcoNI CCTNNNNNAGG 3 cut(s) 13, 267, 1058
EcoO109I RGGNCCY 1 cut(s) 1088
EcoRII CCWGG 3 cut(s) 262, 585, 1090
EcoT14I CCWWGG 1 cut(s) 642
EcoT38I GRGCYC 3 cut(s) 123, 142, 582
ErhI CCWWGG 1 cut(s) 642
FaeI CATG 5 cut(s) 67, 184, 516, 613, 646
FaqI GGGAC 1 cut(s) 1101
FatI CATG 5 cut(s) 63, 180, 512, 609, 642
FauI CCCGC 1 cut(s) 150
Fnu4HI GCNGC 8 cut(s) 318, 321, 450, 621, 630, 696, 912, 1155
FokI GGATG 2 cut(s) 383, 587
FriOI GRGCYC 3 cut(s) 123, 142, 582
Fsp4HI GCNGC 8 cut(s) 318, 321, 450, 621, 630, 696, 912, 1155
FspBI CTAG 6 cut(s) 171, 401, 446, 545, 842, 867
FspI TGCGCA 1 cut(s) 276
GlaI GCGC 2 cut(s) 276, 856
GluI GCNGC 8 cut(s) 318, 321, 450, 621, 630, 696, 912, 1155
GsaI CCCAGC 1 cut(s) 558
HaeII RGCGCY 1 cut(s) 858
HaeIII GGCC 5 cut(s) 388, 483, 519, 803, 824
HapII CCGG 1 cut(s) 154
HgaI GACGC 1 cut(s) 968
HhaI GCGC 2 cut(s) 277, 857
Hin1II CATG 5 cut(s) 67, 184, 516, 613, 646
Hin6I GCGC 2 cut(s) 275, 855
HinP1I GCGC 2 cut(s) 275, 855
HincII GTYRAC 1 cut(s) 958
HindII GTYRAC 1 cut(s) 958
HinfI GANTC 5 cut(s) 205, 404, 497, 665, 1048
HpaII CCGG 1 cut(s) 154
HphI GGTGA 3 cut(s) 20, 40, 1024
Hpy166II GTNNAC 2 cut(s) 470, 958
Hpy188I TCNGA 5 cut(s) 125, 670, 732, 926, 976
Hpy188III TCNNGA 5 cut(s) 154, 704, 891, 980, 1045
Hpy8I GTNNAC 2 cut(s) 470, 958
HpyAV CCTTC 4 cut(s) 19, 35, 118, 288
HpyCH4III ACNGT 4 cut(s) 412, 684, 835, 1042
HpyCH4IV ACGT 1 cut(s) 472
HpyCH4V TGCA 7 cut(s) 4, 211, 470, 613, 695, 737, 1136
HpyF10VI GCNNNNNNNGC 8 cut(s) 77, 208, 227, 626, 629, 638, 800, 908
HpyF3I CTNAG 6 cut(s) 14, 521, 596, 667, 973, 1055
HpySE526I ACGT 1 cut(s) 472
Hsp92II CATG 5 cut(s) 67, 184, 516, 613, 646
HspAI GCGC 2 cut(s) 275, 855
Kpn2I TCCGGA 1 cut(s) 153
Kzo9I GATC 5 cut(s) 167, 197, 361, 489, 976
LguI GCTCTTC 1 cut(s) 1067
LmnI GCTCC 3 cut(s) 126, 137, 156
Lsp1109I GCAGC 7 cut(s) 304, 307, 436, 607, 616, 707, 923
LweI GCATC 4 cut(s) 208, 616, 682, 706
MabI ACCWGGT 1 cut(s) 585
MaeI CTAG 6 cut(s) 171, 401, 446, 545, 842, 867
MaeII ACGT 1 cut(s) 472
MaeIII GTNAC 4 cut(s) 436, 459, 508, 1012
MalI GATC 5 cut(s) 169, 199, 363, 491, 978
MbiI CCGCTC 1 cut(s) 145
MboI GATC 5 cut(s) 167, 197, 361, 489, 976
MboII GAAGA 4 cut(s) 250, 1081, 1084, 1129
MflI RGATCY 1 cut(s) 976
MhlI GDGCHC 4 cut(s) 123, 142, 472, 582
MluCI AATT 6 cut(s) 238, 739, 757, 905, 987, 1082
MlyI GAGTC 3 cut(s) 199, 659, 1042
MmeI TCCRAC 4 cut(s) 175, 265, 267, 642
MroI TCCGGA 1 cut(s) 153
MseI TTAA 2 cut(s) 21, 990
MspI CCGG 1 cut(s) 154
MspR9I CCNGG 3 cut(s) 264, 587, 1092
MvaI CCWGG 3 cut(s) 264, 587, 1092
MvnI CGCG 1 cut(s) 1157
MwoI GCNNNNNNNGC 8 cut(s) 77, 208, 227, 626, 629, 638, 800, 908
NcoI CCATGG 1 cut(s) 642
NdeII GATC 5 cut(s) 167, 197, 361, 489, 976
NlaIII CATG 5 cut(s) 67, 184, 516, 613, 646
NlaIV GGNNCC 5 cut(s) 122, 139, 158, 879, 1089
NmuCI GTSAC 3 cut(s) 436, 508, 1012
NsbI TGCGCA 1 cut(s) 276
NspI RCATGY 1 cut(s) 516
PciI ACATGT 1 cut(s) 512
PciSI GCTCTTC 1 cut(s) 1067
PfeI GAWTC 2 cut(s) 404, 497
PkrI GCNGC 8 cut(s) 319, 322, 451, 622, 631, 697, 913, 1156
PleI GAGTC 3 cut(s) 199, 659, 1042
PmaCI CACGTG 1 cut(s) 473
PmlI CACGTG 1 cut(s) 473
PpsI GAGTC 3 cut(s) 199, 659, 1042
Ppu21I YACGTR 1 cut(s) 473
PpuMI RGGWCCY 1 cut(s) 1088
PscI ACATGT 1 cut(s) 512
PsiI TTATAA 1 cut(s) 416
Psp5II RGGWCCY 1 cut(s) 1088
Psp6I CCWGG 3 cut(s) 262, 585, 1090
PspCI CACGTG 1 cut(s) 473
PspFI CCCAGC 1 cut(s) 554
PspGI CCWGG 3 cut(s) 262, 585, 1090
PspN4I GGNNCC 5 cut(s) 122, 139, 158, 879, 1089
PspPI GGNCC 3 cut(s) 386, 823, 1088
PspPPI RGGWCCY 1 cut(s) 1088
PstNI CAGNNNCTG 1 cut(s) 208
PsuI RGATCY 1 cut(s) 976
RsaI GTAC 1 cut(s) 751
RsaNI GTAC 1 cut(s) 750
SapI GCTCTTC 1 cut(s) 1067
SaqAI TTAA 2 cut(s) 21, 990
SatI GCNGC 8 cut(s) 318, 321, 450, 621, 630, 696, 912, 1155
Sau3AI GATC 5 cut(s) 167, 197, 361, 489, 976
Sau96I GGNCC 3 cut(s) 386, 823, 1088
SchI GAGTC 3 cut(s) 199, 659, 1042
ScrFI CCNGG 3 cut(s) 264, 587, 1092
SduI GDGCHC 4 cut(s) 123, 142, 472, 582
SexAI ACCWGGT 1 cut(s) 585
SfaNI GCATC 4 cut(s) 208, 616, 682, 706
SinI GGWCC 1 cut(s) 1088
SpeI ACTAGT 1 cut(s) 866
Sse9I AATT 6 cut(s) 238, 739, 757, 905, 987, 1082
SsiI CCGC 5 cut(s) 69, 143, 186, 323, 1155
SspI AATATT 1 cut(s) 999
SspMI CTAG 6 cut(s) 171, 401, 446, 545, 842, 867
StyD4I CCNGG 3 cut(s) 262, 585, 1090
StyI CCWWGG 1 cut(s) 642
TaaI ACNGT 4 cut(s) 412, 684, 835, 1042
TaiI ACGT 1 cut(s) 475
TaqI TCGA 2 cut(s) 711, 838
TasI AATT 6 cut(s) 238, 739, 757, 905, 987, 1082
TatI WGTACW 1 cut(s) 749
TauI GCSGC 1 cut(s) 1157
TfiI GAWTC 2 cut(s) 404, 497
Tru1I TTAA 2 cut(s) 21, 990
Tru9I TTAA 2 cut(s) 21, 990
TscAI CASTG 1 cut(s) 655
TseFI GTSAC 3 cut(s) 436, 508, 1012
TseI GCWGC 7 cut(s) 317, 320, 449, 620, 629, 695, 911
Tsp45I GTSAC 3 cut(s) 436, 508, 1012
TspGWI ACGGA 1 cut(s) 181
TspRI CASTG 1 cut(s) 655
VneI GTGCAC 1 cut(s) 468
VpaK11BI GGWCC 1 cut(s) 1088
XagI CCTNNNNNAGG 3 cut(s) 13, 267, 1058
XceI RCATGY 1 cut(s) 516
XcmI CCANNNNNNNNNTGG 1 cut(s) 640
XspI CTAG 6 cut(s) 171, 401, 446, 545, 842, 867
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.