MD03G1055800.v1.1

malonyl-CoA-acyl carrier protein transacylase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Reverse (-)
4432171 .. 4435572
3402 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1055800.v1.1.491

Sequence Viewer

Length: 1164 bp
ATGCACACCTCCCTCAGGCTTAACCTCCACCACCCTCTTATCCTTCGCACCTCACTTGCCACCATGGCCGCCTCCATAGCCCTCCCGTCCTCCATTTCTCTCAACTCCTCATCCTTCTCGGGGATCCGGATTGGCGCCGGAGCCCAGCTCGGAGTCCGAAACTTCGGACAATCTAGAGTTTCCATGGCCGCCTCCGTCGGATCGCAGACTCTGCAAAGCGACGCCTTGTTCGCCGATTACAAGCCCTCCTCTGCTTTCCTCTTCCCTGGCCAAGGTGCACAAGTAGTTGGAATGGGAAAGGAAGCTCAAAGTGTTCCTGCTGCTGCAGAGTTATACAAGAAAGCGAACGACATTTTAGGGTTTGATCTTTTGGATGTTTGTATCAATGGACCAAAAGAGAAATTAGATTCAACCGTTATAAGCCAGCCAGCTATCTATGTCACAAGTCTAGCTGCCGTTGAGTTACTACGTGCACGTGAAGGTGGTCAGCTGATCATTGATTCAGTTGATGTCACATGTGGCCTAAGTTTGGGAGAATATACTGCTCTAGCATTTGCCGAGTCATTCAGCTTTGAGGATGGGCTCAAGCTGGTCAAACTGAGGGGAGAAGCCATGCAGGCAGCTGCCGATGCTGCCAAAAGTGCCATGGTCAGTGTCATCGGGTTGGACTCAGACAAGGTCCAACAGTTGTGTGATGCGGCCAATGAAGAAGTTGATGAAGCTAACAAAGTTCAGATTGCAAATTATCTATGCACCGGAAATTATGCTGTATCTGGTGGTGTGAAGGGAATAGAAGCAGTAGAGGCCAAGGCAAAGTCATTCAAGGCCCGAATGACGGTGCGGCTAGCTGTTGCTGGCGCTTTCCACACTAGTTTTATGGAACCAGCCGTGTCAAGATTAGAAGCTAAGTTGGCAGAAACACAGATCAGGACACCAAGAATACCAGTTATCTCCAACGTTGACGCACAGCCACATTCAGATCCCGAGACAATTAAGAAGATATTGGCTCGTCAGGTGACTTCTCCTGTTCAATGGGAAACAACCGTCAAGACCCTCCTCGGCAAAGGGCTGAAGAAGAGTTATGAATTGGGACCCGGAAAGGTTATAGCTGGCATTGTGAAGAGAATGGAGAGAAGTGCAGACATTGAGAACATTGCTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

388

Amino Acids

40.92

Weight (kDa)

7.65

Isoelectric Point (pI)

32.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acyl_transf_1 PF00698 86 - 371 3.3e-25 Acyl transferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012502)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 419
AccB1I GGYRCC 1 cut(s) 134
AccIII TCCGGA 1 cut(s) 126
AciI CCGC 4 cut(s) 69, 189, 698, 841
AclI AACGTT 1 cut(s) 957
AclWI GGATC 4 cut(s) 118, 131, 208, 974
AcoI YGGCCR 4 cut(s) 66, 186, 268, 699
AcuI CTGAAG 1 cut(s) 1091
AcvI CACGTG 1 cut(s) 476
AcyI GRCGYC 2 cut(s) 135, 222
AfiI CCNNNNNNNGG 5 cut(s) 15, 120, 272, 529, 835
AflIII ACRYGT 1 cut(s) 515
AgsI TTSAA 3 cut(s) 411, 823, 1031
AhlI ACTAGT 1 cut(s) 869
AjnI CCWGG 1 cut(s) 265
Alw21I GWGCWC 2 cut(s) 280, 475
Alw26I GTCTC 1 cut(s) 980
Alw44I GTGCAC 2 cut(s) 276, 471
AlwI GGATC 4 cut(s) 118, 131, 208, 974
AlwNI CAGNNNCTG 1 cut(s) 211
Ama87I CYCGRG 2 cut(s) 118, 983
Aor13HI TCCGGA 1 cut(s) 126
AoxI GGCC 7 cut(s) 66, 186, 268, 520, 699, 804, 825
ApaLI GTGCAC 2 cut(s) 276, 471
ApeKI GCWGC 7 cut(s) 320, 323, 452, 620, 623, 632, 1157
ArsI GACNNNNNNTTYG 2 cut(s) 212, 244
AspLEI GCGC 2 cut(s) 137, 860
AspS9I GGNCC 4 cut(s) 389, 679, 826, 1091
AsuC2I CCSGG 1 cut(s) 1095
AsuHPI GGTGA 1 cut(s) 1027
AsuNHI GCTAGC 1 cut(s) 844
AvaI CYCGRG 2 cut(s) 118, 983
AvaII GGWCC 3 cut(s) 389, 679, 1091
AxyI CCTNAGG 1 cut(s) 14
BaeGI GKGCMC 2 cut(s) 280, 475
BalI TGGCCA 1 cut(s) 270
BamHI GGATCC 1 cut(s) 123
BanI GGYRCC 1 cut(s) 134
BanII GRGCYC 2 cut(s) 145, 585
BbrPI CACGTG 1 cut(s) 476
Bbv12I GWGCWC 2 cut(s) 280, 475
BbvI GCAGC 7 cut(s) 307, 310, 439, 610, 619, 632, 1144
BccI CCATC 1 cut(s) 572
BceAI ACGGC 2 cut(s) 440, 872
BciT130I CCWGG 1 cut(s) 267
BclI TGATCA 1 cut(s) 492
BcnI CCSGG 1 cut(s) 1095
BcoDI GTCTC 1 cut(s) 980
BcuI ACTAGT 1 cut(s) 869
BfaI CTAG 5 cut(s) 174, 449, 548, 845, 870
BfmI CTRYAG 1 cut(s) 324
BfoI RGCGCY 2 cut(s) 138, 861
BglI GCCNNNNNGGC 2 cut(s) 65, 617
Bme1390I CCNGG 2 cut(s) 267, 1095
Bme18I GGWCC 3 cut(s) 389, 679, 1091
BmeT110I CYCGRG 2 cut(s) 118, 983
BmgT120I GGNCC 4 cut(s) 389, 679, 826, 1091
BmiI GGNNCC 6 cut(s) 125, 136, 142, 882, 1092, 1093
BmrFI CCNGG 2 cut(s) 267, 1095
BmsI GCATC 2 cut(s) 619, 685
BmtI GCTAGC 1 cut(s) 848
BplI GAGNNNNNCTC 2 cut(s) 132, 164
BpuEI CTTGAG 1 cut(s) 569
BpuMI CCSGG 1 cut(s) 1095
BsaAI YACGTR 2 cut(s) 470, 476
BsaHI GRCGYC 2 cut(s) 135, 222
BsaJI CCNNGG 7 cut(s) 63, 183, 265, 271, 645, 807, 1057
BsaWI WCCGGW 2 cut(s) 126, 755
BsaXI ACNNNNNCTCC 2 cut(s) 230, 260
Bsc4I CCNNNNNNNGG 5 cut(s) 15, 120, 272, 529, 835
Bse1I ACTGG 1 cut(s) 944
Bse21I CCTNAGG 1 cut(s) 14
Bse3DI GCAATG 1 cut(s) 1152
BseAI TCCGGA 1 cut(s) 126
BseBI CCWGG 1 cut(s) 267
BseDI CCNNGG 7 cut(s) 63, 183, 265, 271, 645, 807, 1057
BseGI GGATG 3 cut(s) 110, 379, 583
BseLI CCNNNNNNNGG 5 cut(s) 15, 120, 272, 529, 835
BseMI GCAATG 1 cut(s) 1152
BseMII CTCAG 3 cut(s) 28, 590, 684
BseNI ACTGG 1 cut(s) 944
BseRI GAGGAG 3 cut(s) 97, 238, 1046
BseSI GKGCMC 2 cut(s) 280, 475
BseXI GCAGC 7 cut(s) 307, 310, 439, 610, 619, 632, 1144
BseYI CCCAGC 1 cut(s) 144
BsgI GTGCAG 1 cut(s) 1158
BshFI GGCC 7 cut(s) 68, 188, 270, 522, 701, 806, 827
BshNI GGYRCC 1 cut(s) 134
BsiHKAI GWGCWC 2 cut(s) 280, 475
BsiHKCI CYCGRG 2 cut(s) 118, 983
BsiSI CCGG 4 cut(s) 127, 138, 756, 1095
BslFI GGGAC 1 cut(s) 1104
BslI CCNNNNNNNGG 5 cut(s) 15, 120, 272, 529, 835
BsmAI GTCTC 1 cut(s) 980
BsmFI GGGAC 1 cut(s) 1104
BsnI GGCC 7 cut(s) 68, 188, 270, 522, 701, 806, 827
BsoBI CYCGRG 2 cut(s) 118, 983
Bsp1286I GDGCHC 4 cut(s) 145, 280, 475, 585
Bsp13I TCCGGA 1 cut(s) 126
Bsp143I GATC 6 cut(s) 123, 200, 364, 492, 924, 979
Bsp19I CCATGG 3 cut(s) 63, 183, 645
BspACI CCGC 4 cut(s) 69, 189, 698, 841
BspANI GGCC 7 cut(s) 68, 188, 270, 522, 701, 806, 827
BspCNI CTCAG 3 cut(s) 27, 591, 683
BspEI TCCGGA 1 cut(s) 126
BspLI GGNNCC 6 cut(s) 125, 136, 142, 882, 1092, 1093
BspMAI CTGCAG 1 cut(s) 328
BspOI GCTAGC 1 cut(s) 848
BspPI GGATC 4 cut(s) 118, 131, 208, 974
BspT107I GGYRCC 1 cut(s) 134
BsrDI GCAATG 1 cut(s) 1152
BsrI ACTGG 1 cut(s) 944
BssECI CCNNGG 7 cut(s) 63, 183, 265, 271, 645, 807, 1057
BssMI GATC 6 cut(s) 123, 200, 364, 492, 924, 979
BssNI GRCGYC 2 cut(s) 135, 222
BssT1I CCWWGG 5 cut(s) 63, 183, 271, 645, 807
Bst2UI CCWGG 1 cut(s) 267
Bst4CI ACNGT 4 cut(s) 415, 687, 838, 1045
Bst6I CTCTTC 3 cut(s) 266, 1070, 1115
BstACI GRCGYC 2 cut(s) 135, 222
BstAPI GCANNNNNTGC 1 cut(s) 211
BstBAI YACGTR 2 cut(s) 470, 476
BstC8I GCNNGC 6 cut(s) 425, 429, 618, 846, 856, 1111
BstDEI CTNAG 5 cut(s) 14, 524, 599, 670, 906
BstDSI CCRYGG 3 cut(s) 63, 183, 645
BstENI CCTNNNNNAGG 2 cut(s) 13, 270
BstF5I GGATG 3 cut(s) 110, 379, 583
BstH2I RGCGCY 2 cut(s) 138, 861
BstHHI GCGC 2 cut(s) 137, 860
BstKTI GATC 6 cut(s) 126, 203, 367, 495, 927, 982
BstMAI GTCTC 1 cut(s) 980
BstMBI GATC 6 cut(s) 123, 200, 364, 492, 924, 979
BstNI CCWGG 1 cut(s) 267
BstNSI RCATGY 1 cut(s) 519
BstSCI CCNGG 2 cut(s) 265, 1093
BstSFI CTRYAG 1 cut(s) 324
BstSLI GKGCMC 2 cut(s) 280, 475
BstV1I GCAGC 7 cut(s) 307, 310, 439, 610, 619, 632, 1144
BstX2I RGATCY 2 cut(s) 123, 979
BstYI RGATCY 2 cut(s) 123, 979
Bsu36I CCTNAGG 1 cut(s) 14
BsuRI GGCC 7 cut(s) 68, 188, 270, 522, 701, 806, 827
BtgI CCRYGG 3 cut(s) 63, 183, 645
BtsCI GGATG 3 cut(s) 110, 379, 583
BtsIMutI CAGTG 1 cut(s) 658
Cac8I GCNNGC 6 cut(s) 425, 429, 618, 846, 856, 1111
CaiI CAGNNNCTG 1 cut(s) 211
CfoI GCGC 2 cut(s) 137, 860
Cfr13I GGNCC 4 cut(s) 389, 679, 826, 1091
CseI GACGC 2 cut(s) 230, 971
CviAII CATG 5 cut(s) 64, 184, 516, 613, 646
DdeI CTNAG 5 cut(s) 14, 524, 599, 670, 906
DinI GGCGCC 1 cut(s) 136
DpnI GATC 6 cut(s) 125, 202, 366, 494, 926, 981
DpnII GATC 6 cut(s) 123, 200, 364, 492, 924, 979
EaeI YGGCCR 4 cut(s) 66, 186, 268, 699
Eam1104I CTCTTC 3 cut(s) 266, 1070, 1115
EarI CTCTTC 3 cut(s) 266, 1070, 1115
Eco130I CCWWGG 5 cut(s) 63, 183, 271, 645, 807
Eco24I GRGCYC 2 cut(s) 145, 585
Eco47I GGWCC 3 cut(s) 389, 679, 1091
Eco57I CTGAAG 1 cut(s) 1091
Eco72I CACGTG 1 cut(s) 476
Eco81I CCTNAGG 1 cut(s) 14
Eco88I CYCGRG 2 cut(s) 118, 983
EcoNI CCTNNNNNAGG 2 cut(s) 13, 270
EcoO109I RGGNCCY 1 cut(s) 1091
EcoRII CCWGG 1 cut(s) 265
EcoT14I CCWWGG 5 cut(s) 63, 183, 271, 645, 807
EcoT38I GRGCYC 2 cut(s) 145, 585
EgeI GGCGCC 1 cut(s) 136
EheI GGCGCC 1 cut(s) 136
ErhI CCWWGG 5 cut(s) 63, 183, 271, 645, 807
FaeI CATG 5 cut(s) 67, 187, 519, 616, 649
FaqI GGGAC 1 cut(s) 1104
FatI CATG 5 cut(s) 63, 183, 515, 612, 645
FbaI TGATCA 1 cut(s) 492
FokI GGATG 3 cut(s) 97, 386, 590
FriOI GRGCYC 2 cut(s) 145, 585
FspBI CTAG 5 cut(s) 174, 449, 548, 845, 870
GlaI GCGC 2 cut(s) 136, 859
GsaI CCCAGC 1 cut(s) 148
HaeII RGCGCY 2 cut(s) 138, 861
HaeIII GGCC 7 cut(s) 68, 188, 270, 522, 701, 806, 827
HapII CCGG 4 cut(s) 127, 138, 756, 1095
HgaI GACGC 2 cut(s) 230, 971
HhaI GCGC 2 cut(s) 137, 860
Hin1I GRCGYC 2 cut(s) 135, 222
Hin1II CATG 5 cut(s) 67, 187, 519, 616, 649
Hin6I GCGC 2 cut(s) 135, 858
HinP1I GCGC 2 cut(s) 135, 858
HincII GTYRAC 1 cut(s) 961
HindII GTYRAC 1 cut(s) 961
HinfI GANTC 6 cut(s) 153, 208, 407, 500, 560, 668
HpaII CCGG 4 cut(s) 127, 138, 756, 1095
HphI GGTGA 1 cut(s) 1027
Hpy166II GTNNAC 3 cut(s) 278, 473, 961
Hpy188I TCNGA 7 cut(s) 152, 158, 167, 200, 673, 735, 979
Hpy188III TCNNGA 6 cut(s) 127, 174, 894, 928, 983, 1048
Hpy8I GTNNAC 3 cut(s) 278, 473, 961
Hpy99I CGWCG 2 cut(s) 200, 224
HpyAV CCTTC 4 cut(s) 53, 124, 473, 778
HpyCH4III ACNGT 4 cut(s) 415, 687, 838, 1045
HpyCH4IV ACGT 3 cut(s) 469, 475, 957
HpyCH4V TGCA 9 cut(s) 4, 214, 278, 326, 473, 616, 740, 753, 1139
HpyF3I CTNAG 5 cut(s) 14, 524, 599, 670, 906
HpySE526I ACGT 3 cut(s) 469, 475, 957
Hsp92I GRCGYC 2 cut(s) 135, 222
Hsp92II CATG 5 cut(s) 67, 187, 519, 616, 649
HspAI GCGC 2 cut(s) 135, 858
KasI GGCGCC 1 cut(s) 134
KflI GGGWCCC 1 cut(s) 1091
Kpn2I TCCGGA 1 cut(s) 126
Ksp22I TGATCA 1 cut(s) 492
Kzo9I GATC 6 cut(s) 123, 200, 364, 492, 924, 979
LmnI GCTCC 1 cut(s) 140
Lsp1109I GCAGC 7 cut(s) 307, 310, 439, 610, 619, 632, 1144
LweI GCATC 2 cut(s) 619, 685
MaeI CTAG 5 cut(s) 174, 449, 548, 845, 870
MaeII ACGT 3 cut(s) 469, 475, 957
MaeIII GTNAC 4 cut(s) 439, 462, 511, 1015
MalI GATC 6 cut(s) 125, 202, 366, 494, 926, 981
MboI GATC 6 cut(s) 123, 200, 364, 492, 924, 979
MboII GAAGA 6 cut(s) 253, 719, 1009, 1084, 1087, 1132
MflI RGATCY 2 cut(s) 123, 979
MhlI GDGCHC 4 cut(s) 145, 280, 475, 585
MlsI TGGCCA 1 cut(s) 270
MluCI AATT 5 cut(s) 401, 742, 760, 990, 1085
MluNI TGGCCA 1 cut(s) 270
Mly113I GGCGCC 1 cut(s) 135
MlyI GAGTC 4 cut(s) 162, 202, 569, 662
MmeI TCCRAC 5 cut(s) 178, 268, 645, 706, 978
Mox20I TGGCCA 1 cut(s) 270
MroI TCCGGA 1 cut(s) 126
MscI TGGCCA 1 cut(s) 270
MseI TTAA 2 cut(s) 21, 993
Msp20I TGGCCA 1 cut(s) 270
MspA1I CMGCKG 2 cut(s) 490, 623
MspI CCGG 4 cut(s) 127, 138, 756, 1095
MspR9I CCNGG 2 cut(s) 267, 1095
MvaI CCWGG 1 cut(s) 267
NarI GGCGCC 1 cut(s) 135
NciI CCSGG 1 cut(s) 1095
NcoI CCATGG 3 cut(s) 63, 183, 645
NdeII GATC 6 cut(s) 123, 200, 364, 492, 924, 979
NheI GCTAGC 1 cut(s) 844
NlaIII CATG 5 cut(s) 67, 187, 519, 616, 649
NlaIV GGNNCC 6 cut(s) 125, 136, 142, 882, 1092, 1093
NmeAIII GCCGAG 2 cut(s) 583, 1038
NmuCI GTSAC 3 cut(s) 439, 511, 1015
NspI RCATGY 1 cut(s) 519
PciI ACATGT 1 cut(s) 515
PfeI GAWTC 2 cut(s) 407, 500
PflFI GACNNNGTC 1 cut(s) 677
PleI GAGTC 4 cut(s) 161, 202, 568, 662
PluTI GGCGCC 1 cut(s) 138
PmaCI CACGTG 1 cut(s) 476
PmlI CACGTG 1 cut(s) 476
PpsI GAGTC 4 cut(s) 161, 202, 568, 662
Ppu21I YACGTR 2 cut(s) 470, 476
PpuMI RGGWCCY 1 cut(s) 1091
PscI ACATGT 1 cut(s) 515
PsiI TTATAA 1 cut(s) 419
Psp1406I AACGTT 1 cut(s) 957
Psp5II RGGWCCY 1 cut(s) 1091
Psp6I CCWGG 1 cut(s) 265
PspCI CACGTG 1 cut(s) 476
PspFI CCCAGC 1 cut(s) 144
PspGI CCWGG 1 cut(s) 265
PspN4I GGNNCC 6 cut(s) 125, 136, 142, 882, 1092, 1093
PspPI GGNCC 4 cut(s) 389, 679, 826, 1091
PspPPI RGGWCCY 1 cut(s) 1091
PstI CTGCAG 1 cut(s) 328
PstNI CAGNNNCTG 1 cut(s) 211
PsuI RGATCY 2 cut(s) 123, 979
PsyI GACNNNGTC 1 cut(s) 677
PvuII CAGCTG 2 cut(s) 490, 623
SaqAI TTAA 2 cut(s) 21, 993
Sau3AI GATC 6 cut(s) 123, 200, 364, 492, 924, 979
Sau96I GGNCC 4 cut(s) 389, 679, 826, 1091
SchI GAGTC 4 cut(s) 162, 202, 569, 662
ScrFI CCNGG 2 cut(s) 267, 1095
SduI GDGCHC 4 cut(s) 145, 280, 475, 585
SfaNI GCATC 2 cut(s) 619, 685
SfcI CTRYAG 1 cut(s) 324
SfoI GGCGCC 1 cut(s) 136
SinI GGWCC 3 cut(s) 389, 679, 1091
SmlI CTYRAG 1 cut(s) 584
SmoI CTYRAG 1 cut(s) 584
SpeI ACTAGT 1 cut(s) 869
Sse9I AATT 5 cut(s) 401, 742, 760, 990, 1085
SsiI CCGC 4 cut(s) 69, 189, 698, 841
SspDI GGCGCC 1 cut(s) 134
SspMI CTAG 5 cut(s) 174, 449, 548, 845, 870
StyD4I CCNGG 2 cut(s) 265, 1093
StyI CCWWGG 5 cut(s) 63, 183, 271, 645, 807
TaaI ACNGT 4 cut(s) 415, 687, 838, 1045
TaiI ACGT 3 cut(s) 472, 478, 960
TasI AATT 5 cut(s) 401, 742, 760, 990, 1085
TauI GCSGC 4 cut(s) 71, 191, 701, 844
TfiI GAWTC 2 cut(s) 407, 500
Tru1I TTAA 2 cut(s) 21, 993
Tru9I TTAA 2 cut(s) 21, 993
TscAI CASTG 1 cut(s) 658
TseFI GTSAC 3 cut(s) 439, 511, 1015
TseI GCWGC 7 cut(s) 320, 323, 452, 620, 623, 632, 1157
Tsp45I GTSAC 3 cut(s) 439, 511, 1015
TspDTI ATGAA 3 cut(s) 720, 732, 1098
TspGWI ACGGA 1 cut(s) 184
TspRI CASTG 1 cut(s) 658
Tth111I GACNNNGTC 1 cut(s) 677
VneI GTGCAC 2 cut(s) 276, 471
VpaK11BI GGWCC 3 cut(s) 389, 679, 1091
XagI CCTNNNNNAGG 2 cut(s) 13, 270
XbaI TCTAGA 1 cut(s) 173
XceI RCATGY 1 cut(s) 519
XcmI CCANNNNNNNNNTGG 1 cut(s) 643
XspI CTAG 5 cut(s) 174, 449, 548, 845, 870
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.