Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0017940

Physical Location & Seq

Genomic Coordinates Forward (+)

13350369 .. 13351490

Gene Structure 1122 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G31305.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 324 bp

ATGAGCACAGCAACAAGGCCTTCCTCTTCAGCAACAACTTCTGTCATATTAGAAAACCCTGTTTCTCAATCACAACCTACTGAAAGATTAGTGCTTCGGTTGAACCGGAAGAAGAAGAAAGTTTCATGGAAAGATGGGACTGTAGACAATGAGTTTATGCAGAAGAAGAGTTCGAAGAAGTGTTGCATCTTTCATAAACAGAAGCCTTTTGATGAGGATGACAGTGAAGAAGAAGATGATAACAACCATCACTGTGATCATAACCATGAACACTCCGAATCTGGTGAGGCATCTTCTTCTAATGATTCTAAAGCCGTTGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000164 GO:0003006 GO:0003674 GO:0004857 GO:0004864 GO:0004865 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0007275 GO:0008150 GO:0008157 GO:0008287 GO:0009790 GO:0009791 GO:0009793 GO:0009892 GO:0010154 GO:0010563 GO:0010605 GO:0010921 GO:0010923 GO:0019208 GO:0019212 GO:0019220 GO:0019222 GO:0019888 GO:0019899 GO:0019902 GO:0019903 GO:0022414 GO:0030234 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032515 GO:0032991 GO:0035303 GO:0035304 GO:0035305 GO:0035308 GO:0043086 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043666 GO:0044092 GO:0044424 GO:0044444 GO:0044464 GO:0045936 GO:0048316 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0060255 GO:0061458 GO:0065007 GO:0065009 GO:0080090 GO:0098772 GO:1902494 GO:1903293

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPI_Ypi1

Protein Analysis

107

Amino Acids

12.1

Weight (kDa)

5.84

Isoelectric Point (pI)

65.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPI_Ypi1	PF07491	35 - 80	2.9e-19	Protein phosphatase inhibitor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0017940)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31305
fragaria_vesca	FvH4_5g18370
malus_domestica	MD06G1239400.v1.1
prunus_persica	Prupe.5G243300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0177221
rosa_multiflora	Rmu_sc0001235.1_g000007 Rmu_sc0005310.1_g000016 Rmu_sc0035487.1_g000001
rosa_roxburghii	Rroxscaffold_3G00276040
rosa_rugosa	Rorug06G0403900
rosa_samantha	Rh7AG003900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	144
AcuI	CTGAAG	1 cut(s)	12
AgsI	TTSAA	1 cut(s)	103
Alw21I	GWGCWC	1 cut(s)	8
AoxI	GGCC	1 cut(s)	17
AsuHPI	GGTGA	1 cut(s)	296
AsuII	TTCGAA	1 cut(s)	173
Bbv12I	GWGCWC	1 cut(s)	8
BccI	CCATC	2 cut(s)	128, 255
BceAI	ACGGC	1 cut(s)	299
BclI	TGATCA	1 cut(s)	256
BfmI	CTRYAG	1 cut(s)	141
BmsI	GCATC	2 cut(s)	195, 299
Bpu14I	TTCGAA	1 cut(s)	173
BsaWI	WCCGGW	1 cut(s)	105
BseGI	GGATG	1 cut(s)	223
BshFI	GGCC	1 cut(s)	19
BsiHKAI	GWGCWC	1 cut(s)	8
BsiSI	CCGG	1 cut(s)	106
BslFI	GGGAC	1 cut(s)	151
BsmFI	GGGAC	1 cut(s)	151
BsnI	GGCC	1 cut(s)	19
Bsp119I	TTCGAA	1 cut(s)	173
Bsp1286I	GDGCHC	1 cut(s)	8
Bsp143I	GATC	1 cut(s)	256
BspANI	GGCC	1 cut(s)	19
BspT104I	TTCGAA	1 cut(s)	173
BssMI	GATC	1 cut(s)	256
Bst4CI	ACNGT	3 cut(s)	142, 224, 254
Bst6I	CTCTTC	2 cut(s)	31, 161
BstBI	TTCGAA	1 cut(s)	173
BstF5I	GGATG	1 cut(s)	223
BstKTI	GATC	1 cut(s)	259
BstMBI	GATC	1 cut(s)	256
BstSFI	CTRYAG	1 cut(s)	141
BsuRI	GGCC	1 cut(s)	19
BtsCI	GGATG	1 cut(s)	223
BtsIMutI	CAGTG	2 cut(s)	229, 250
CviAII	CATG	2 cut(s)	126, 266
CviJI	RGCY	3 cut(s)	19, 205, 314
CviKI_1	RGCY	3 cut(s)	19, 205, 314
DpnI	GATC	1 cut(s)	258
DpnII	GATC	1 cut(s)	256
Eam1104I	CTCTTC	2 cut(s)	31, 161
EarI	CTCTTC	2 cut(s)	31, 161
Eco147I	AGGCCT	1 cut(s)	19
Eco57I	CTGAAG	1 cut(s)	12
FaeI	CATG	2 cut(s)	129, 269
FaiI	YATR	6 cut(s)	47, 127, 158, 195, 261, 267
FaqI	GGGAC	1 cut(s)	151
FatI	CATG	2 cut(s)	125, 265
FbaI	TGATCA	1 cut(s)	256
FblI	GTMKAC	1 cut(s)	144
FokI	GGATG	1 cut(s)	230
HaeIII	GGCC	1 cut(s)	19
HapII	CCGG	1 cut(s)	106
Hin1II	CATG	2 cut(s)	129, 269
HincII	GTYRAC	1 cut(s)	319
HindII	GTYRAC	1 cut(s)	319
HinfI	GANTC	2 cut(s)	278, 305
HpaII	CCGG	1 cut(s)	106
HphI	GGTGA	1 cut(s)	296
Hpy166II	GTNNAC	2 cut(s)	145, 319
Hpy188I	TCNGA	1 cut(s)	277
Hpy8I	GTNNAC	2 cut(s)	145, 319
HpyAV	CCTTC	1 cut(s)	30
HpyCH4III	ACNGT	3 cut(s)	142, 224, 254
HpyCH4V	TGCA	2 cut(s)	160, 186
Hsp92II	CATG	2 cut(s)	129, 269
Ksp22I	TGATCA	1 cut(s)	256
Kzo9I	GATC	1 cut(s)	256
LpnPI	CCDG	3 cut(s)	72, 119, 267
LweI	GCATC	2 cut(s)	195, 299
MalI	GATC	1 cut(s)	258
MboI	GATC	1 cut(s)	256
MhlI	GDGCHC	1 cut(s)	8
MnlI	CCTC	3 cut(s)	34, 208, 280
MslI	CAYNNNNRTG	2 cut(s)	252, 264
MspI	CCGG	1 cut(s)	106
NdeII	GATC	1 cut(s)	256
NlaIII	CATG	2 cut(s)	129, 269
NspV	TTCGAA	1 cut(s)	173
PceI	AGGCCT	1 cut(s)	19
PfeI	GAWTC	2 cut(s)	278, 305
RseI	CAYNNNNRTG	2 cut(s)	252, 264
Sau3AI	GATC	1 cut(s)	256
SduI	GDGCHC	1 cut(s)	8
SetI	ASST	1 cut(s)	79
SfaNI	GCATC	2 cut(s)	195, 299
SfcI	CTRYAG	1 cut(s)	141
SfuI	TTCGAA	1 cut(s)	173
SgeI	CNNG	6 cut(s)	27, 71, 118, 138, 278, 294
SmiMI	CAYNNNNRTG	2 cut(s)	252, 264
SseBI	AGGCCT	1 cut(s)	19
StuI	AGGCCT	1 cut(s)	19
TaaI	ACNGT	3 cut(s)	142, 224, 254
TaqI	TCGA	1 cut(s)	173
TfiI	GAWTC	2 cut(s)	278, 305
TscAI	CASTG	2 cut(s)	229, 257
TspDTI	ATGAA	3 cut(s)	114, 182, 282
TspRI	CASTG	2 cut(s)	229, 257
XmiI	GTMKAC	1 cut(s)	144

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.