Prupe.5G243300_v2.0.a1

type 1 phosphatases regulator

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
18264717 .. 18265061
345 bp
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UTR
Exon/CDS
Intron
Prupe.5G243300.1

Sequence Viewer

Length: 345 bp
ATGAGCGGCGGCGGCAGAGCACAACCGATAACGAGAGGGAGCGTGACGACCACCATCACCCTTGAGAATCCCGACGCATCGGCATCGGCATCGGCATCGGCATCTTCATCATCGCAATCGGAAGCTTTGGTTTTGCGGCTGAATCGGAAGAAGAAGAAGCAAGTGACATGGAAGGAGGGGACGGTGGACAACGAGTTCATGCAAAAGAAGAGCTCCAAAAAGTGTTGCATCTTCCACAAGCAGAAGCCCTTCGACGAAGACGACAGCGATGATGAGGATCACCACCATCAGCATCACCCCTCACCTTCGGGCCATCAAAACAACGTCTGTTCTGATGAATCGTAG

Protein Analysis

115

Amino Acids

12.51

Weight (kDa)

6.64

Isoelectric Point (pI)

47.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0017940)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G31305
fragaria_vesca FvH4_5g18370
malus_domestica MD06G1239400.v1.1
prunus_persica Prupe.5G243300_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0177221
rosa_multiflora Rmu_sc0001235.1_g000007 Rmu_sc0005310.1_g000016 Rmu_sc0035487.1_g000001
rosa_roxburghii Rroxscaffold_3G00276040
rosa_rugosa Rorug06G0403900
rosa_samantha Rh7AG003900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 6
AciI CCGC 4 cut(s) 6, 9, 12, 136
AclWI GGATC 1 cut(s) 285
AloI GAACNNNNNNTCC 2 cut(s) 179, 211
AluBI AGCT 2 cut(s) 125, 213
AluI AGCT 2 cut(s) 125, 213
Alw21I GWGCWC 2 cut(s) 22, 215
AlwI GGATC 1 cut(s) 285
AoxI GGCC 1 cut(s) 310
Asp700I GAANNNNTTC 1 cut(s) 248
AspS9I GGNCC 1 cut(s) 310
AsuHPI GGTGA 4 cut(s) 49, 272, 287, 294
BanII GRGCYC 1 cut(s) 215
BbsI GAAGAC 1 cut(s) 264
Bbv12I GWGCWC 2 cut(s) 22, 215
BccI CCATC 3 cut(s) 62, 294, 321
BcgI CGANNNNNNTGC 6 cut(s) 66, 72, 78, 100, 106, 112
BisI GCNGC 4 cut(s) 7, 10, 13, 137
BlsI GCNGC 4 cut(s) 8, 11, 14, 138
BmgT120I GGNCC 1 cut(s) 310
BmsI GCATC 7 cut(s) 86, 92, 98, 104, 110, 237, 301
BpiI GAAGAC 1 cut(s) 264
BpuEI CTTGAG 1 cut(s) 83
BsaBI GATNNNNATC 1 cut(s) 276
Bse8I GATNNNNATC 1 cut(s) 276
BseJI GATNNNNATC 1 cut(s) 276
BshFI GGCC 1 cut(s) 312
BsiHKAI GWGCWC 2 cut(s) 22, 215
BslFI GGGAC 1 cut(s) 193
BsmFI GGGAC 1 cut(s) 193
BsnI GGCC 1 cut(s) 312
Bsp1286I GDGCHC 2 cut(s) 22, 215
Bsp143I GATC 1 cut(s) 277
BspACI CCGC 4 cut(s) 6, 9, 12, 136
BspANI GGCC 1 cut(s) 312
BspPI GGATC 1 cut(s) 285
BspQI GCTCTTC 1 cut(s) 203
BsrBI CCGCTC 1 cut(s) 6
BssMI GATC 1 cut(s) 277
Bst4CI ACNGT 1 cut(s) 184
Bst6I CTCTTC 1 cut(s) 203
BstKTI GATC 1 cut(s) 280
BstMBI GATC 1 cut(s) 277
BstMWI GCNNNNNNNGC 1 cut(s) 12
BstV2I GAAGAC 1 cut(s) 264
BsuRI GGCC 1 cut(s) 312
BtgZI GCGATG 2 cut(s) 96, 282
Cfr13I GGNCC 1 cut(s) 310
CseI GACGC 1 cut(s) 83
CviAII CATG 2 cut(s) 168, 199
CviJI RGCY 5 cut(s) 125, 139, 213, 247, 312
CviKI_1 RGCY 5 cut(s) 125, 139, 213, 247, 312
DpnI GATC 1 cut(s) 279
DpnII GATC 1 cut(s) 277
Eam1104I CTCTTC 1 cut(s) 203
EarI CTCTTC 1 cut(s) 203
Ecl136II GAGCTC 1 cut(s) 213
Eco24I GRGCYC 1 cut(s) 215
Eco53kI GAGCTC 1 cut(s) 213
EcoICRI GAGCTC 1 cut(s) 213
EcoT38I GRGCYC 1 cut(s) 215
FaeI CATG 2 cut(s) 171, 202
FaiI YATR 2 cut(s) 169, 200
FaqI GGGAC 1 cut(s) 193
FatI CATG 2 cut(s) 167, 198
Fnu4HI GCNGC 4 cut(s) 7, 10, 13, 137
FriOI GRGCYC 1 cut(s) 215
Fsp4HI GCNGC 4 cut(s) 7, 10, 13, 137
GluI GCNGC 4 cut(s) 7, 10, 13, 137
HaeIII GGCC 1 cut(s) 312
HgaI GACGC 1 cut(s) 83
Hin1II CATG 2 cut(s) 171, 202
HindIII AAGCTT 1 cut(s) 123
HinfI GANTC 3 cut(s) 67, 142, 338
HphI GGTGA 4 cut(s) 49, 272, 287, 294
Hpy166II GTNNAC 1 cut(s) 187
Hpy188I TCNGA 3 cut(s) 121, 147, 334
Hpy188III TCNNGA 1 cut(s) 71
Hpy8I GTNNAC 1 cut(s) 187
Hpy99I CGWCG 2 cut(s) 77, 257
HpyAV CCTTC 3 cut(s) 166, 259, 315
HpyCH4III ACNGT 1 cut(s) 184
HpyCH4IV ACGT 1 cut(s) 324
HpyCH4V TGCA 2 cut(s) 202, 228
HpyF10VI GCNNNNNNNGC 1 cut(s) 12
HpySE526I ACGT 1 cut(s) 324
Hsp92II CATG 2 cut(s) 171, 202
Kzo9I GATC 1 cut(s) 277
LguI GCTCTTC 1 cut(s) 203
LmnI GCTCC 2 cut(s) 39, 218
LweI GCATC 7 cut(s) 86, 92, 98, 104, 110, 237, 301
MaeII ACGT 1 cut(s) 324
MaeIII GTNAC 2 cut(s) 43, 163
MalI GATC 1 cut(s) 279
MbiI CCGCTC 1 cut(s) 6
MboI GATC 1 cut(s) 277
MboII GAAGA 7 cut(s) 96, 160, 163, 166, 220, 223, 269
MhlI GDGCHC 2 cut(s) 22, 215
MnlI CCTC 4 cut(s) 29, 169, 268, 310
MroXI GAANNNNTTC 1 cut(s) 248
MwoI GCNNNNNNNGC 1 cut(s) 12
NdeII GATC 1 cut(s) 277
NlaIII CATG 2 cut(s) 171, 202
NmuCI GTSAC 2 cut(s) 43, 163
PciSI GCTCTTC 1 cut(s) 203
PcsI WCGNNNNNNNCGW 1 cut(s) 258
PdmI GAANNNNTTC 1 cut(s) 248
PfeI GAWTC 3 cut(s) 67, 142, 338
PkrI GCNGC 4 cut(s) 8, 11, 14, 138
Psp124BI GAGCTC 1 cut(s) 215
PspPI GGNCC 1 cut(s) 310
SacI GAGCTC 1 cut(s) 215
SapI GCTCTTC 1 cut(s) 203
SatI GCNGC 4 cut(s) 7, 10, 13, 137
Sau3AI GATC 1 cut(s) 277
Sau96I GGNCC 1 cut(s) 310
SduI GDGCHC 2 cut(s) 22, 215
SetI ASST 4 cut(s) 127, 215, 307, 327
SfaNI GCATC 7 cut(s) 86, 92, 98, 104, 110, 237, 301
SmlI CTYRAG 1 cut(s) 62
SmoI CTYRAG 1 cut(s) 62
SsiI CCGC 4 cut(s) 6, 9, 12, 136
SstI GAGCTC 1 cut(s) 215
TaaI ACNGT 1 cut(s) 184
TaiI ACGT 1 cut(s) 327
TaqI TCGA 1 cut(s) 252
TauI GCSGC 4 cut(s) 9, 12, 15, 139
TfiI GAWTC 3 cut(s) 67, 142, 338
TseFI GTSAC 2 cut(s) 43, 163
Tsp45I GTSAC 2 cut(s) 43, 163
TspDTI ATGAA 2 cut(s) 96, 187
XmnI GAANNNNTTC 1 cut(s) 248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.