AT2G32130

Plant protein of unknown function (DUF641)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0013266
Physical Location & Seq
Reverse (-)
13654805 .. 13655525
721 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G32130.1

Sequence Viewer

Length: 474 bp
ATGAGGAAGGTCTCCTCCAACAATGGAGTCGGAGTCGGTACGTTTAAGTCACAGAATCCAAATTTCGACGATGAAGATGACGACGGAGACTGCCTTTTTAAAGCGGTGGTTGCGAAGATCTTCGCTAGTACAACTTCCATTAAAGCTGCTTACGCAGAGCTTCAGAGGGCTCAAAGTCCGTACGATAGCGACGCTATACAAGCGGCGGATACGGTGGTAGTTAATGAACTAAAAACTTTATCGGAGCTTAAACGGAGTTTTATGAGGAAGGAATTGAATCTTTCACCAAAAGTTGCGATTATGTTAGCTGAGATCCATGAACAGCAGAGTTTGATGAGGACTTATGAAATCGCGATGAAGAGACTTGAATTTGAAGTTACGGAGAAGAAAGTGAAGATCGATGAGTTGAAGATGAATCTTGAAGAGAATTTGGTGATGAATAAATCGTTGGAGAAGAAACTCACAGCTACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF641

Protein Analysis

157

Amino Acids

17.7

Weight (kDa)

5.58

Isoelectric Point (pI)

39.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF641 PF04859 33 - 153 1.2e-42 Plant protein of unknown function (DUF641)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013266)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G29300 AT2G32130
fragaria_vesca FvH4_3g07250 FvH4_3g07250
malus_domestica MD00G1008600.v1.1 MD10G1275000.v1.1
prunus_persica Prupe.4G067400_v2.0.a1
pyrus_communis pycom05g27380 pycom10g22960
rosa_chinensis RchiOBHm_Chr5g0011811
rosa_laevigata RLG00000031863
rosa_multiflora Rmu_ssc0000357.1_g000004
rosa_rugosa Rorug04G0459400
rosa_samantha Rh5AG090900 Rh5BG086500 Rh5CG100300 Rh5DG086500
rosa_wichuraiana Rw5G007930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 353
AciI CCGC 3 cut(s) 104, 203, 206
AclWI GGATC 1 cut(s) 307
AcsI RAATTY 3 cut(s) 61, 368, 427
AcuI CTGAAG 1 cut(s) 146
AfaI GTAC 3 cut(s) 40, 130, 182
AgsI TTSAA 5 cut(s) 277, 368, 374, 409, 422
AjuI GAANNNNNNNTTGG 2 cut(s) 431, 463
AluBI AGCT 5 cut(s) 146, 160, 247, 308, 467
AluI AGCT 5 cut(s) 146, 160, 247, 308, 467
Alw26I GTCTC 3 cut(s) 16, 81, 355
AlwI GGATC 1 cut(s) 307
ApeKI GCWGC 1 cut(s) 146
ApoI RAATTY 3 cut(s) 61, 368, 427
Asp700I GAANNNNTTC 1 cut(s) 119
AsuHPI GGTGA 2 cut(s) 276, 445
BaeI ACNNNNGTAYC 2 cut(s) 201, 234
BanII GRGCYC 1 cut(s) 172
BbvI GCAGC 1 cut(s) 133
BciVI GTATCC 1 cut(s) 202
BcoDI GTCTC 3 cut(s) 16, 81, 355
BfaI CTAG 1 cut(s) 126
BfuI GTATCC 1 cut(s) 202
BglII AGATCT 1 cut(s) 117
BisI GCNGC 2 cut(s) 147, 204
BlsI GCNGC 2 cut(s) 148, 205
Bsa29I ATCGAT 1 cut(s) 399
BsaI GGTCTC 1 cut(s) 16
BsaXI ACNNNNNCTCC 2 cut(s) 18, 48
BseCI ATCGAT 1 cut(s) 399
BseMII CTCAG 1 cut(s) 300
BseRI GAGGAG 1 cut(s) 4
BseXI GCAGC 1 cut(s) 133
Bsh1236I CGCG 1 cut(s) 353
BshVI ATCGAT 1 cut(s) 399
BsiWI CGTACG 1 cut(s) 180
BsmAI GTCTC 3 cut(s) 16, 81, 355
Bso31I GGTCTC 1 cut(s) 16
Bsp1286I GDGCHC 1 cut(s) 172
Bsp143I GATC 3 cut(s) 117, 312, 396
Bsp68I TCGCGA 1 cut(s) 353
BspACI CCGC 3 cut(s) 104, 203, 206
BspCNI CTCAG 1 cut(s) 301
BspDI ATCGAT 1 cut(s) 399
BspFNI CGCG 1 cut(s) 353
BspPI GGATC 1 cut(s) 307
BspTNI GGTCTC 1 cut(s) 16
BssMI GATC 3 cut(s) 117, 312, 396
Bst4CI ACNGT 1 cut(s) 214
Bst6I CTCTTC 2 cut(s) 353, 417
BstDEI CTNAG 1 cut(s) 309
BstFNI CGCG 1 cut(s) 353
BstKTI GATC 3 cut(s) 120, 315, 399
BstMAI GTCTC 3 cut(s) 16, 81, 355
BstMBI GATC 3 cut(s) 117, 312, 396
BstMWI GCNNNNNNNGC 3 cut(s) 110, 152, 200
BstUI CGCG 1 cut(s) 353
BstV1I GCAGC 1 cut(s) 133
BstX2I RGATCY 2 cut(s) 117, 312
BstYI RGATCY 2 cut(s) 117, 312
Bsu15I ATCGAT 1 cut(s) 399
BsuI GTATCC 1 cut(s) 202
BsuTUI ATCGAT 1 cut(s) 399
BtgZI GCGATG 1 cut(s) 368
BtuMI TCGCGA 1 cut(s) 353
ClaI ATCGAT 1 cut(s) 399
CseI GACGC 1 cut(s) 200
Csp6I GTAC 3 cut(s) 39, 129, 181
CviAII CATG 1 cut(s) 317
CviJI RGCY 6 cut(s) 146, 160, 170, 247, 308, 467
CviKI_1 RGCY 6 cut(s) 146, 160, 170, 247, 308, 467
CviQI GTAC 3 cut(s) 39, 129, 181
DdeI CTNAG 1 cut(s) 309
DpnI GATC 3 cut(s) 119, 314, 398
DpnII GATC 3 cut(s) 117, 312, 396
DraI TTTAAA 1 cut(s) 100
Eam1104I CTCTTC 2 cut(s) 353, 417
EarI CTCTTC 2 cut(s) 353, 417
EciI GGCGGA 1 cut(s) 221
Eco24I GRGCYC 1 cut(s) 172
Eco31I GGTCTC 1 cut(s) 16
Eco57I CTGAAG 1 cut(s) 146
EcoT38I GRGCYC 1 cut(s) 172
FaeI CATG 1 cut(s) 320
FaiI YATR 5 cut(s) 197, 263, 302, 318, 345
FatI CATG 1 cut(s) 316
Fnu4HI GCNGC 2 cut(s) 147, 204
FriOI GRGCYC 1 cut(s) 172
Fsp4HI GCNGC 2 cut(s) 147, 204
FspBI CTAG 1 cut(s) 126
GluI GCNGC 2 cut(s) 147, 204
HgaI GACGC 1 cut(s) 200
Hin1II CATG 1 cut(s) 320
HinfI GANTC 5 cut(s) 27, 33, 55, 277, 415
HphI GGTGA 2 cut(s) 276, 445
Hpy188I TCNGA 3 cut(s) 32, 165, 244
Hpy188III TCNNGA 2 cut(s) 352, 419
Hpy99I CGWCG 3 cut(s) 71, 86, 194
HpyAV CCTTC 1 cut(s) 262
HpyCH4III ACNGT 1 cut(s) 214
HpyCH4IV ACGT 1 cut(s) 41
HpyF10VI GCNNNNNNNGC 3 cut(s) 110, 152, 200
HpyF3I CTNAG 1 cut(s) 309
HpySE526I ACGT 1 cut(s) 41
Hsp92II CATG 1 cut(s) 320
Kzo9I GATC 3 cut(s) 117, 312, 396
LmnI GCTCC 1 cut(s) 244
Lsp1109I GCAGC 1 cut(s) 133
MaeI CTAG 1 cut(s) 126
MaeII ACGT 1 cut(s) 41
MaeIII GTNAC 2 cut(s) 48, 376
MalI GATC 3 cut(s) 119, 314, 398
MboI GATC 3 cut(s) 117, 312, 396
MboII GAAGA 9 cut(s) 86, 112, 127, 370, 397, 406, 421, 434, 466
MflI RGATCY 2 cut(s) 117, 312
MhlI GDGCHC 1 cut(s) 172
MluCI AATT 4 cut(s) 61, 272, 368, 427
MlyI GAGTC 2 cut(s) 36, 42
MmeI TCCRAC 3 cut(s) 10, 42, 429
MnlI CCTC 4 cut(s) 25, 159, 258, 330
MroXI GAANNNNTTC 1 cut(s) 119
MseI TTAA 5 cut(s) 45, 99, 141, 222, 249
MvnI CGCG 1 cut(s) 353
MwoI GCNNNNNNNGC 3 cut(s) 110, 152, 200
NdeII GATC 3 cut(s) 117, 312, 396
NlaIII CATG 1 cut(s) 320
NmuCI GTSAC 1 cut(s) 48
NruI TCGCGA 1 cut(s) 353
PdmI GAANNNNTTC 1 cut(s) 119
PfeI GAWTC 3 cut(s) 55, 277, 415
Pfl23II CGTACG 1 cut(s) 180
PkrI GCNGC 2 cut(s) 148, 205
PleI GAGTC 2 cut(s) 35, 41
PpsI GAGTC 2 cut(s) 35, 41
PspLI CGTACG 1 cut(s) 180
PsuI RGATCY 2 cut(s) 117, 312
RruI TCGCGA 1 cut(s) 353
RsaI GTAC 3 cut(s) 40, 130, 182
RsaNI GTAC 3 cut(s) 39, 129, 181
SaqAI TTAA 5 cut(s) 45, 99, 141, 222, 249
SatI GCNGC 2 cut(s) 147, 204
Sau3AI GATC 3 cut(s) 117, 312, 396
SchI GAGTC 2 cut(s) 36, 42
SduI GDGCHC 1 cut(s) 172
SetI ASST 7 cut(s) 12, 44, 148, 162, 249, 310, 469
SgeI CNNG 6 cut(s) 138, 212, 329, 364, 377, 431
Sse9I AATT 4 cut(s) 61, 272, 368, 427
SsiI CCGC 3 cut(s) 104, 203, 206
SspMI CTAG 1 cut(s) 126
TaaI ACNGT 1 cut(s) 214
TaiI ACGT 1 cut(s) 44
TaqI TCGA 2 cut(s) 66, 399
TasI AATT 4 cut(s) 61, 272, 368, 427
TatI WGTACW 1 cut(s) 128
TauI GCSGC 1 cut(s) 206
TfiI GAWTC 3 cut(s) 55, 277, 415
Tru1I TTAA 5 cut(s) 45, 99, 141, 222, 249
Tru9I TTAA 5 cut(s) 45, 99, 141, 222, 249
TseFI GTSAC 1 cut(s) 48
TseI GCWGC 1 cut(s) 146
Tsp45I GTSAC 1 cut(s) 48
TspDTI ATGAA 7 cut(s) 87, 240, 333, 360, 371, 428, 452
TspGWI ACGGA 4 cut(s) 99, 168, 268, 395
XapI RAATTY 3 cut(s) 61, 368, 427
XmnI GAANNNNTTC 1 cut(s) 119
XspI CTAG 1 cut(s) 126
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.