Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0002700

Physical Location & Seq

Genomic Coordinates Reverse (-)

61183257 .. 61189880

Gene Structure 6624 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0459400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2265 bp

ATGTCAATATGCGTCGCAAGTAAAGGCGAAAACAGAGGCAGAGGGAATTGGAAGCGAGCGAGCGAGAGAGAGATGGAGAATTTGAAGTTGGGAATGTTGGATGGTTTCTTGACGAAAAGCCAACACAAGAGTCTGAAATCTCTTTTCCGCCGGAGCCGGAGCAGCAGCAGCACCACCACCGAAGATGACTCCCCTTCCTCTTCCTCTGCCGCCAATTCTCCCAAACCCATTCCTCACCTCTCTCCTTTCGCCAATTCCGTCGTCTCTCGCTGTTCCAAGATTCTTCGGATCCCTACTGAAGAATTACAGCATCATTTTGACACCCAGCTACCTGAAAGTGTAAAGGAACTTCTGACTTATGCTAGGAACTTTTTGGAATTTTGCTCATACCAAGCACTCCATGTAGTGAGTAGTCGCCCGGATTATTTGAGTGATAAGGACTTTCGTCATATGACCTTTGACATGATGCTTGCATGGGAATCACCTTGTGTTGAGAATATACAACTACACAAAGAAACCGCTTCTAGCAGTAACCAAGAAGTAGAGGATGAAGATGGTTGGTCGCTTTTTTATTCTAGTTCTACGAGTATGGCTGTCCAGGTTGATGACAAAAAAACTGTTGGGCCCGAAGCCTTTGCACGAATAGCACCTGGTTGTGCTGCTGTTGCAGATGTAATAACTGTCCACAACCTCTATGATGCACTCACAAGCACATCAGGCCATCATCGACTTCATTTCCTTGTATATGACAAATACATAAGAAGCCTAGACAAGGTTATTAAGGCTTCCAAAAGTACATTAGCTTCTTCCATTGGAAATCTTCAGCTCGTTGAGGGAGAAATCATCCTTGATGTTGATGGTACAGTTCCCACTCAACCAGTGCTCAAACATATTGGCAGGTCTATGTGGCCTGGACGGCTGTCACTGACCAATAGTGCGCTGTATTTTGAATCATTGGGAGTTGGTTTGTATGACAAAGCTGTTAGATATGATCTGGCAACAGATATGAAGCAGGTCATAAAACCAGAATTGACTGGACCGTTGGGTACTCGTCTTTTCGATAAAGCCATCATGTACAAATCGACGTCTGTAGAAGAGCCGGTCCATTTGGAGTTTCCTGAGTTCAAAGGCAATTCTCGCCGAGATTATTGGTTGGATATTTGTCTTGAAATCTTGCGTGCTCACAGGTTCATTCAGAAAAACAACCTTAAAGCAATTCAGAAATCAGAAGTACTGGCAAGGGCTATTTTAGGCATCTGGCGATATCGTGCAGTTCGAGAAGCCTTCCACTTCTTTTCATCCCATTATAAAACCTTACTTGCTTTCAACCTTGCTGAATGTCTTCCGGGAGGAGACTCGATTTTGAAAACTTTGTCTAGTCGATTGGTTATTTTGAATTCCAGTGCTTCCCAACATGATGTTTCTCCACATTCAAAACGGCAGGCAAAATTGTCTCCAATTTCACTTATAGCACTAACCCAGCTTGGATTCATATTGCAAAAGGAAGTCAACCTTGATGGAGAGGTAATAATAGTTGGAGAGGTTTGTGCTGGTGAAATTAACCCCTTGCAAATGGCAGTGAAACAGTCATTATTGGACACTGGAAGGGCTGAAGCTGCACAGGCAACTGTGGACCAAGTGAAAGTGGATGGGATTGATACAAATGTTGCAATAATGAAGGAGTTACTGTTTCCGGTTATTGAATTAGCCAATTGTGCTCAACGTTTGGCATCATGGGAAAAGCCTTACAAGTCAACAATTTTTCTGGTGTTGACCTGCTTCTTTATAGTAAGGGGCTGGTTCAGTTATGTATTGCCCTCCGTTTTTGTATTGGTAGCAGTTGTCATGCTCTGGTGCAGGCATTTCAACAAAGGGAAACCATTAAAACCATTCAGGATTACACCTCCCCATAACAATGCAGTAGAGCAGCTGCTGACATTACAAGAAGCCATCACTCAAGTTGAAGCATTACTTCGAGCTGGGAATATTATCCTACTGAAGATAAGAGCCCTCCTGTTTGCAGTTCTTCCTCAGGCATCGGACAAGATTGTTATACTGCTGGTTTTCATGGCAGCAATGTTTGCATTCGTGCCTCCACGATATATAATCCTGCTAGTATTTCTGGAGGCTTTTACAAGGGAAATGCCATATAGGAAAGAAAGCAGTGACACGTGGGTGAGGCGGATTAGAGAATGGTGGATTCGCATACCAGCAGCTCCTGTCCAGCTCATCAAACCTGAGGATAACAAGAAAAAGAAATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005984 GO:0005991 GO:0005992 GO:0006793 GO:0006796 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009311 GO:0009312 GO:0009987 GO:0016051 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0033554 GO:0034637 GO:0042578 GO:0044237 GO:0044238 GO:0044249 GO:0044262 GO:0044424 GO:0044444 GO:0044464 GO:0046351 GO:0050896 GO:0051716 GO:0070413 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glyco_transf_20 Trehalose_PPase

Protein Analysis

754

Amino Acids

84.92

Weight (kDa)

8.97

Isoelectric Point (pI)

44.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF639	PF04842	520 - 744	1.4e-62	Plant protein of unknown function (DUF639)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002700)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06410 AT1G06410 AT1G06410
fragaria_vesca	FvH4_3g07260 FvH4_6g27760 FvH4_6g27760
malus_domestica	MD00G1008700.v1.1 MD09G1234800.v1.1 MD10G1275100.v1.1
prunus_persica	Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.4G067300_v2.0.a1
pyrus_communis	pycom05g27390 pycom09g15300 pycom10g22970
rosa_chinensis	RchiOBHm_Chr2g0131021 RchiOBHm_Chr5g0011801
rosa_laevigata	RLG00000019161 RLG00000031862
rosa_multiflora	Rmu_sc0003629.1_g000054 Rmu_ssc0000357.1_g000005
rosa_roxburghii	Rroxscaffold_1G00064760
rosa_rugosa	Rorug02G0294400 Rorug04G0459400
rosa_samantha	Rh2AG346700 Rh2BG354100 Rh2CG332700 Rh2DG372200 Rh5AG090700 Rh5BG086300 Rh5CG100100 Rh5DG086400
rosa_wichuraiana	Rw0G018970 Rw2G028110 Rw2G028150 Rw5G007920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1308
AatII	GACGTC	1 cut(s)	1088
Acc36I	ACCTGC	3 cut(s)	888, 1003, 1784
AciI	CCGC	4 cut(s)	148, 210, 519, 2182
AclI	AACGTT	1 cut(s)	1723
AclWI	GGATC	2 cut(s)	283, 296
AcsI	RAATTY	3 cut(s)	79, 377, 1396
AcuI	CTGAAG	4 cut(s)	318, 806, 1632, 2018
AcvI	CACGTG	1 cut(s)	2172
AcyI	GRCGYC	1 cut(s)	1085
AdeI	CACNNNGTG	1 cut(s)	488
AfaI	GTAC	5 cut(s)	796, 862, 1048, 1076, 1233
AfiI	CCNNNNNNNGG	1 cut(s)	772
AflIII	ACRYGT	1 cut(s)	2169
AjnI	CCWGG	3 cut(s)	597, 649, 910
AjuI	GAANNNNNNNTTGG	2 cut(s)	71, 103
AleI	CACNNNNGTG	1 cut(s)	2174
Alw21I	GWGCWC	3 cut(s)	885, 1183, 1720
Alw26I	GTCTC	3 cut(s)	268, 1347, 1458
AlwI	GGATC	2 cut(s)	283, 296
AlwNI	CAGNNNCTG	2 cut(s)	1933, 2219
AoxI	GGCC	3 cut(s)	623, 718, 908
ApaI	GGGCCC	1 cut(s)	627
ApeKI	GCWGC	9 cut(s)	162, 165, 168, 659, 1616, 1927, 1930, 2072, 2213
ApoI	RAATTY	3 cut(s)	79, 377, 1396
Asp700I	GAANNNNTTC	1 cut(s)	1341
AspLEI	GCGC	1 cut(s)	940
AspS9I	GGNCC	5 cut(s)	623, 624, 1037, 1102, 1633
AsuC2I	CCSGG	2 cut(s)	419, 1347
AsuHPI	GGTGA	4 cut(s)	227, 474, 1565, 2188
AvaII	GGWCC	3 cut(s)	1037, 1102, 1633
AxyI	CCTNAGG	2 cut(s)	2031, 2238
BaeGI	GKGCMC	1 cut(s)	627
BaeI	ACNNNNGTAYC	2 cut(s)	1650, 1683
BamHI	GGATCC	1 cut(s)	288
BanII	GRGCYC	2 cut(s)	627, 2011
BarI	GAAGNNNNNNTAC	4 cut(s)	333, 365, 787, 819
BbrPI	CACGTG	1 cut(s)	2172
BbsI	GAAGAC	1 cut(s)	1334
Bbv12I	GWGCWC	3 cut(s)	885, 1183, 1720
BbvI	GCAGC	9 cut(s)	174, 177, 180, 646, 1603, 1917, 1939, 2084, 2225
BccI	CCATC	9 cut(s)	67, 95, 548, 729, 851, 1076, 1511, 1643, 1958
BceAI	ACGGC	2 cut(s)	932, 1454
BcgI	CGANNNNNNTGC	2 cut(s)	617, 651
BciT130I	CCWGG	3 cut(s)	599, 651, 912
BcnI	CCSGG	2 cut(s)	419, 1347
BcoDI	GTCTC	3 cut(s)	268, 1347, 1458
BfaI	CTAG	6 cut(s)	363, 525, 576, 767, 1377, 2114
BfmI	CTRYAG	1 cut(s)	1089
BfuAI	ACCTGC	3 cut(s)	888, 1003, 1784
BglI	GCCNNNNNGGC	1 cut(s)	916
BmcAI	AGTACT	1 cut(s)	1233
Bme1390I	CCNGG	5 cut(s)	419, 599, 651, 912, 1347
Bme18I	GGWCC	3 cut(s)	1037, 1102, 1633
BmgT120I	GGNCC	5 cut(s)	623, 624, 1037, 1102, 1633
BmiI	GGNNCC	3 cut(s)	155, 290, 625
BmrFI	CCNGG	5 cut(s)	419, 599, 651, 912, 1347
BmsI	GCATC	6 cut(s)	319, 456, 688, 1263, 1739, 2045
BoxI	GACNNNNGTC	2 cut(s)	444, 919
BpiI	GAAGAC	1 cut(s)	1334
BpmI	CTGGAG	1 cut(s)	2144
BpuEI	CTTGAG	1 cut(s)	1941
BpuMI	CCSGG	2 cut(s)	419, 1347
BsaAI	YACGTR	1 cut(s)	2172
BsaHI	GRCGYC	1 cut(s)	1085
BsaWI	WCCGGW	1 cut(s)	1693
BsaXI	ACNNNNNCTCC	2 cut(s)	1673, 1703
Bsc4I	CCNNNNNNNGG	1 cut(s)	772
Bse118I	RCCGGY	1 cut(s)	1099
Bse1I	ACTGG	5 cut(s)	878, 1039, 1239, 1401, 1606
Bse21I	CCTNAGG	2 cut(s)	2031, 2238
Bse3DI	GCAATG	1 cut(s)	2082
BseBI	CCWGG	3 cut(s)	599, 651, 912
BseGI	GGATG	5 cut(s)	106, 553, 843, 1298, 1654
BseLI	CCNNNNNNNGG	1 cut(s)	772
BseMI	GCAATG	1 cut(s)	2082
BseMII	CTCAG	3 cut(s)	1110, 2045, 2229
BseNI	ACTGG	5 cut(s)	878, 1039, 1239, 1401, 1606
BseRI	GAGGAG	1 cut(s)	1365
BseSI	GKGCMC	1 cut(s)	627
BseXI	GCAGC	9 cut(s)	174, 177, 180, 646, 1603, 1917, 1939, 2084, 2225
BseYI	CCCAGC	3 cut(s)	324, 1479, 1979
BsgI	GTGCAG	3 cut(s)	1290, 1602, 1876
BshFI	GGCC	3 cut(s)	625, 720, 910
BsiHKAI	GWGCWC	3 cut(s)	885, 1183, 1720
BsiSI	CCGG	6 cut(s)	151, 157, 419, 1100, 1346, 1694
BslI	CCNNNNNNNGG	1 cut(s)	772
BsmAI	GTCTC	3 cut(s)	268, 1347, 1458
BsmBI	CGTCTC	1 cut(s)	268
BsmI	GAATGC	1 cut(s)	2084
BsnI	GGCC	3 cut(s)	625, 720, 910
Bsp120I	GGGCCC	1 cut(s)	623
Bsp1286I	GDGCHC	5 cut(s)	627, 885, 1183, 1720, 2011
Bsp1407I	TGTACA	1 cut(s)	1074
Bsp143I	GATC	2 cut(s)	288, 991
BspACI	CCGC	4 cut(s)	148, 210, 519, 2182
BspANI	GGCC	3 cut(s)	625, 720, 910
BspCNI	CTCAG	3 cut(s)	1111, 2044, 2230
BspLI	GGNNCC	3 cut(s)	155, 290, 625
BspMI	ACCTGC	3 cut(s)	888, 1003, 1784
BspPI	GGATC	2 cut(s)	283, 296
BspQI	GCTCTTC	1 cut(s)	1089
BsrDI	GCAATG	1 cut(s)	2082
BsrFI	RCCGGY	1 cut(s)	1099
BsrGI	TGTACA	1 cut(s)	1074
BsrI	ACTGG	5 cut(s)	878, 1039, 1239, 1401, 1606
BssAI	RCCGGY	1 cut(s)	1099
BssMI	GATC	2 cut(s)	288, 991
BssNI	GRCGYC	1 cut(s)	1085
Bst2UI	CCWGG	3 cut(s)	599, 651, 912
Bst4CI	ACNGT	7 cut(s)	619, 682, 865, 1041, 1587, 1630, 1689
Bst6I	CTCTTC	2 cut(s)	205, 1089
BstACI	GRCGYC	1 cut(s)	1085
BstAPI	GCANNNNNTGC	1 cut(s)	2081
BstAUI	TGTACA	1 cut(s)	1074
BstBAI	YACGTR	1 cut(s)	2172
BstC8I	GCNNGC	6 cut(s)	57, 61, 471, 1179, 1443, 1859
BstDEI	CTNAG	3 cut(s)	1119, 2031, 2238
BstENI	CCTNNNNNAGG	1 cut(s)	770
BstF5I	GGATG	5 cut(s)	106, 553, 843, 1298, 1654
BstHHI	GCGC	1 cut(s)	940
BstKTI	GATC	2 cut(s)	291, 994
BstMAI	GTCTC	3 cut(s)	268, 1347, 1458
BstMBI	GATC	2 cut(s)	288, 991
BstNI	CCWGG	3 cut(s)	599, 651, 912
BstPAI	GACNNNNGTC	2 cut(s)	444, 919
BstSCI	CCNGG	5 cut(s)	417, 597, 649, 910, 1345
BstSFI	CTRYAG	1 cut(s)	1089
BstSLI	GKGCMC	1 cut(s)	627
BstV1I	GCAGC	9 cut(s)	174, 177, 180, 646, 1603, 1917, 1939, 2084, 2225
BstV2I	GAAGAC	1 cut(s)	1334
BstX2I	RGATCY	1 cut(s)	288
BstYI	RGATCY	1 cut(s)	288
Bsu36I	CCTNAGG	2 cut(s)	2031, 2238
BsuRI	GGCC	3 cut(s)	625, 720, 910
BtsCI	GGATG	5 cut(s)	106, 553, 843, 1298, 1654
BtsI	GCAGTG	2 cut(s)	1584, 2170
BtsIMutI	CAGTG	6 cut(s)	885, 923, 1408, 1584, 1599, 2170
BveI	ACCTGC	3 cut(s)	888, 1003, 1784
Cac8I	GCNNGC	6 cut(s)	57, 61, 471, 1179, 1443, 1859
CaiI	CAGNNNCTG	2 cut(s)	1933, 2219
CfoI	GCGC	1 cut(s)	940
Cfr10I	RCCGGY	1 cut(s)	1099
Cfr13I	GGNCC	5 cut(s)	623, 624, 1037, 1102, 1633
CsiI	ACCWGGT	1 cut(s)	649
Csp6I	GTAC	5 cut(s)	795, 861, 1047, 1075, 1232
CviAII	CATG	8 cut(s)	401, 463, 474, 1072, 1415, 1734, 1846, 2068
CviQI	GTAC	5 cut(s)	795, 861, 1047, 1075, 1232
DdeI	CTNAG	3 cut(s)	1119, 2031, 2238
DpnI	GATC	2 cut(s)	290, 993
DpnII	GATC	2 cut(s)	288, 991
DraIII	CACNNNGTG	1 cut(s)	488
Eam1104I	CTCTTC	2 cut(s)	205, 1089
EarI	CTCTTC	2 cut(s)	205, 1089
EciI	GGCGGA	2 cut(s)	137, 2197
Eco24I	GRGCYC	2 cut(s)	627, 2011
Eco32I	GATATC	1 cut(s)	1265
Eco47I	GGWCC	3 cut(s)	1037, 1102, 1633
Eco57I	CTGAAG	4 cut(s)	318, 806, 1632, 2018
Eco72I	CACGTG	1 cut(s)	2172
Eco81I	CCTNAGG	2 cut(s)	2031, 2238
EcoNI	CCTNNNNNAGG	1 cut(s)	770
EcoRI	GAATTC	1 cut(s)	1396
EcoRII	CCWGG	3 cut(s)	597, 649, 910
EcoRV	GATATC	1 cut(s)	1265
EcoT38I	GRGCYC	2 cut(s)	627, 2011
Esp3I	CGTCTC	1 cut(s)	268
FaeI	CATG	8 cut(s)	404, 466, 477, 1075, 1418, 1737, 1849, 2071
FalI	AAGNNNNNCTT	4 cut(s)	1497, 1529, 1956, 1988
FatI	CATG	8 cut(s)	400, 462, 473, 1071, 1414, 1733, 1845, 2067
FauNDI	CATATG	1 cut(s)	450
FokI	GGATG	5 cut(s)	113, 560, 830, 1285, 1661
FriOI	GRGCYC	2 cut(s)	627, 2011
FspBI	CTAG	6 cut(s)	363, 525, 576, 767, 1377, 2114
GlaI	GCGC	1 cut(s)	939
GsaI	CCCAGC	3 cut(s)	328, 1483, 1983
GsuI	CTGGAG	1 cut(s)	2144
HaeIII	GGCC	3 cut(s)	625, 720, 910
HapII	CCGG	6 cut(s)	151, 157, 419, 1100, 1346, 1694
HhaI	GCGC	1 cut(s)	940
Hin1I	GRCGYC	1 cut(s)	1085
Hin1II	CATG	8 cut(s)	404, 466, 477, 1075, 1418, 1737, 1849, 2071
Hin6I	GCGC	1 cut(s)	938
HinP1I	GCGC	1 cut(s)	938
HincII	GTYRAC	3 cut(s)	1510, 1755, 1773
HindII	GTYRAC	3 cut(s)	1510, 1755, 1773
HinfI	GANTC	8 cut(s)	130, 188, 280, 479, 950, 1355, 1488, 2200
HpaII	CCGG	6 cut(s)	151, 157, 419, 1100, 1346, 1694
HphI	GGTGA	4 cut(s)	227, 474, 1565, 2188
Hpy166II	GTNNAC	5 cut(s)	685, 1510, 1633, 1755, 1773
Hpy188I	TCNGA	7 cut(s)	135, 288, 354, 1197, 1221, 1228, 2041
Hpy188III	TCNNGA	6 cut(s)	109, 1118, 1166, 1277, 1894, 2123
Hpy8I	GTNNAC	5 cut(s)	685, 1510, 1633, 1755, 1773
Hpy99I	CGWCG	3 cut(s)	17, 263, 1087
HpyAV	CCTTC	4 cut(s)	204, 1294, 1599, 1672
HpyCH4III	ACNGT	7 cut(s)	619, 682, 865, 1041, 1587, 1630, 1689
HpyCH4IV	ACGT	3 cut(s)	1085, 1723, 2171
HpyF3I	CTNAG	3 cut(s)	1119, 2031, 2238
HpySE526I	ACGT	3 cut(s)	1085, 1723, 2171
Hsp92I	GRCGYC	1 cut(s)	1085
Hsp92II	CATG	8 cut(s)	404, 466, 477, 1075, 1418, 1737, 1849, 2071
HspAI	GCGC	1 cut(s)	938
Kzo9I	GATC	2 cut(s)	288, 991
LguI	GCTCTTC	1 cut(s)	1089
LmnI	GCTCC	3 cut(s)	153, 159, 2221
Lsp1109I	GCAGC	9 cut(s)	174, 177, 180, 646, 1603, 1917, 1939, 2084, 2225
LweI	GCATC	6 cut(s)	319, 456, 688, 1263, 1739, 2045
MabI	ACCWGGT	1 cut(s)	649
MaeI	CTAG	6 cut(s)	363, 525, 576, 767, 1377, 2114
MaeII	ACGT	3 cut(s)	1085, 1723, 2171
MaeIII	GTNAC	4 cut(s)	530, 921, 1683, 2165
MalI	GATC	2 cut(s)	290, 993
MboI	GATC	2 cut(s)	288, 991
MfeI	CAATTG	1 cut(s)	1711
MflI	RGATCY	1 cut(s)	288
MhlI	GDGCHC	5 cut(s)	627, 885, 1183, 1720, 2011
MlyI	GAGTC	3 cut(s)	139, 182, 1349
MmeI	TCCRAC	3 cut(s)	78, 1134, 1516
MroXI	GAANNNNTTC	1 cut(s)	1341
MseI	TTAA	4 cut(s)	780, 1209, 1560, 1883
MslI	CAYNNNNRTG	2 cut(s)	1914, 2174
MspA1I	CMGCKG	1 cut(s)	1930
MspI	CCGG	6 cut(s)	151, 157, 419, 1100, 1346, 1694
MspR9I	CCNGG	5 cut(s)	419, 599, 651, 912, 1347
MunI	CAATTG	1 cut(s)	1711
Mva1269I	GAATGC	1 cut(s)	2084
MvaI	CCWGG	3 cut(s)	599, 651, 912
NciI	CCSGG	2 cut(s)	419, 1347
NdeI	CATATG	1 cut(s)	450
NdeII	GATC	2 cut(s)	288, 991
NlaIII	CATG	8 cut(s)	404, 466, 477, 1075, 1418, 1737, 1849, 2071
NlaIV	GGNNCC	3 cut(s)	155, 290, 625
NmeAIII	GCCGAG	1 cut(s)	1166
NmuCI	GTSAC	2 cut(s)	921, 2165
OliI	CACNNNNGTG	1 cut(s)	2174
PciSI	GCTCTTC	1 cut(s)	1089
PcsI	WCGNNNNNNNCGW	2 cut(s)	255, 1273
PctI	GAATGC	1 cut(s)	2084
PdmI	GAANNNNTTC	1 cut(s)	1341
PfeI	GAWTC	5 cut(s)	280, 479, 950, 1488, 2200
PfoI	TCCNGGA	1 cut(s)	1345
PleI	GAGTC	3 cut(s)	138, 182, 1349
PmaCI	CACGTG	1 cut(s)	2172
PmlI	CACGTG	1 cut(s)	2172
PpsI	GAGTC	3 cut(s)	138, 182, 1349
Ppu21I	YACGTR	1 cut(s)	2172
PshAI	GACNNNNGTC	2 cut(s)	444, 919
PsiI	TTATAA	1 cut(s)	1308
Psp1406I	AACGTT	1 cut(s)	1723
Psp6I	CCWGG	3 cut(s)	597, 649, 910
PspCI	CACGTG	1 cut(s)	2172
PspFI	CCCAGC	3 cut(s)	324, 1479, 1979
PspGI	CCWGG	3 cut(s)	597, 649, 910
PspN4I	GGNNCC	3 cut(s)	155, 290, 625
PspOMI	GGGCCC	1 cut(s)	623
PspPI	GGNCC	5 cut(s)	623, 624, 1037, 1102, 1633
PstNI	CAGNNNCTG	2 cut(s)	1933, 2219
PsuI	RGATCY	1 cut(s)	288
PvuII	CAGCTG	1 cut(s)	1930
RsaI	GTAC	5 cut(s)	796, 862, 1048, 1076, 1233
RsaNI	GTAC	5 cut(s)	795, 861, 1047, 1075, 1232
RseI	CAYNNNNRTG	2 cut(s)	1914, 2174
SapI	GCTCTTC	1 cut(s)	1089
SaqAI	TTAA	4 cut(s)	780, 1209, 1560, 1883
Sau3AI	GATC	2 cut(s)	288, 991
Sau96I	GGNCC	5 cut(s)	623, 624, 1037, 1102, 1633
ScaI	AGTACT	1 cut(s)	1233
SchI	GAGTC	3 cut(s)	139, 182, 1349
ScrFI	CCNGG	5 cut(s)	419, 599, 651, 912, 1347
SduI	GDGCHC	5 cut(s)	627, 885, 1183, 1720, 2011
SexAI	ACCWGGT	1 cut(s)	649
SfaNI	GCATC	6 cut(s)	319, 456, 688, 1263, 1739, 2045
SfcI	CTRYAG	1 cut(s)	1089
SinI	GGWCC	3 cut(s)	1037, 1102, 1633
SmiMI	CAYNNNNRTG	2 cut(s)	1914, 2174
SmlI	CTYRAG	1 cut(s)	1956
SmoI	CTYRAG	1 cut(s)	1956
SsiI	CCGC	4 cut(s)	148, 210, 519, 2182
SspI	AATATT	1 cut(s)	1987
SspMI	CTAG	6 cut(s)	363, 525, 576, 767, 1377, 2114
StyD4I	CCNGG	5 cut(s)	417, 597, 649, 910, 1345
TaaI	ACNGT	7 cut(s)	619, 682, 865, 1041, 1587, 1630, 1689
TaiI	ACGT	3 cut(s)	1088, 1726, 2174
TaqI	TCGA	7 cut(s)	727, 1059, 1082, 1276, 1358, 1381, 1975
TatI	WGTACW	3 cut(s)	794, 1074, 1231
TauI	GCSGC	1 cut(s)	212
TfiI	GAWTC	5 cut(s)	280, 479, 950, 1488, 2200
Tru1I	TTAA	4 cut(s)	780, 1209, 1560, 1883
Tru9I	TTAA	4 cut(s)	780, 1209, 1560, 1883
TscAI	CASTG	6 cut(s)	885, 930, 1408, 1584, 1606, 2170
TseFI	GTSAC	2 cut(s)	921, 2165
TseI	GCWGC	9 cut(s)	162, 165, 168, 659, 1616, 1927, 1930, 2072, 2213
Tsp45I	GTSAC	2 cut(s)	921, 2165
TspDTI	ATGAA	8 cut(s)	564, 722, 1022, 1180, 1287, 1480, 1691, 2056
TspGWI	ACGGA	2 cut(s)	247, 1810
TspRI	CASTG	6 cut(s)	885, 930, 1408, 1584, 1606, 2170
VpaK11BI	GGWCC	3 cut(s)	1037, 1102, 1633
XagI	CCTNNNNNAGG	1 cut(s)	770
XapI	RAATTY	3 cut(s)	79, 377, 1396
XmnI	GAANNNNTTC	1 cut(s)	1341
XspI	CTAG	6 cut(s)	363, 525, 576, 767, 1377, 2114
ZraI	GACGTC	1 cut(s)	1086
ZrmI	AGTACT	1 cut(s)	1233

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.