Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0002700

Physical Location & Seq

Genomic Coordinates Reverse (-)

1116406 .. 1121013

Gene Structure 4608 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1008700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2565 bp

ATGATGTCCAAATCGTATACCAATCTTTTAGATCTAGCCTCCGGGAACTTTCCGGTAATGGGTCGCGAAAGACGGCGGCTTCCGCGTGTAATGACCGTTGCCGGTGTTATATCTGAGCTTGATGATGATCAGGCTGGTAGTGTGTCTTCGGATGTTCCGTCCTCGATCGTTCAGGACCGGATAATTATTGTTGCCAACCAGCTCCCTGTGAAAGCTAAGCGGAGACCGGATAATAAAGGATGGAGCTTTAGTTGGGATGAGGACTCATTGTTATTGCAGTTGAAGGACGGTTTACCTGAAGATATGGAGGTTTTGTATGTAGGTTCTTTGAGCGTCGAAGTGGATTCGAATGAACAGGACGATGTATCAGCGCTCCTGTTGGATAGATTCAAGAGTGTTCCAGCTTTTTTGCCGCCCGACATTTTGTCCAAGTTCTATCATGGGTTTTGTAAGCAGCATTTGTGGCCTTTGTTTCATTACATGCTTCCATTCTCAGCAACCCATGGTGGGAGGTTCGATCGGTCTTTGTGGGAAGCATATGTGGCTGCAAATAAGATTTTTTCACAAAGGGTGATCGAGGTAATAAATCCGGAGGATGACTATGTGTGGATTCATGATTACCATCTAATGGTGCTGCCTACCTTCTTGAGGAGGAGATTCAATAGATTGAGAATGGGGTTTTTTCTTCACAGCCCATTCCCTTCGTCTGAAATATATAGGACTCTACCGGTAAGGGAAGAGATCCTAAAGGCACTTCTAAATTCGGACCTTATTGGGTTCCACACATTTGATTACGCTCGACATTTCTTGTCTTGTTGTAGTCGGATGTTGGGTTTGGAGTATCAGTCAAAGCGGGGTTATATTGGGCTGGATTATTTTGGAAGGACAGTTGGGATAAAGATCATGCCTGTCGGGATTCATATGGGGCAGATTGGGTCAGTGTTGAAGCTTGCCGATAAGGAGTGGAGGGAAGGAGAACTTAAACAACAGTTTGAGGGGAAGACTGTGCTGCTGGGTGTTGATGATATGGACATCTTTAAAGGTGTCAACTTGAAGCTCTTGGCAATGGAACAGATGCTGAAGCAGCATCCGAAGTGGCAGGGGAAAGCGGTTCTGGTACAGATAGCAAACCCTGCTAGGGGAAGAGGGAAAGATCTTGAGGAAACGCAGGCTGAAATTCAGTCAAGCATCAAAAGAATTAATGAAAAATTTGGTCGGACTGGTTATGAACCCATTGTGTTTATTGATAGGCAAGTCTCTCTTAGTGAAAGAGTTGCATATTACACCATTGCCGAGTGTGTAGTTGTCACAGCTGTGAGAGATGGGATGAATCTTATTCCATATGAATACATTGTGTGCAGGCAAGGAAACTCTGTATCAGATTCTAATTCAGAACACAGTGGGCCGAAGAAGAGCATGCTAGTAGTATCAGAGTTTATTGGATGTTCCCCTTCACTAAGTGGTGCAATTCGGGTTAACCCATGGAATACTGAATCAACGGCTGAGGCGATGAATGAGGCAATTTCAATGGAGGAACCCGAGAAGCAGTTGCGCCATGAGAAGCATTATAGGTATGTTAGTACACATGATGTGGCATACTGGTCACGAAGTGTTTTCCAAGATATGGAGAGAACTTGCAAAGACCATTTCAGAAGGCGTTGCTGGGGTATTGGTTTGGGCTTCGGCTTCAGGGTTATAGCACTTGATCCTAACTTCAGAAAGCTGACTATTGATCACATTGTTTCTGCTTATTTGAGATCTAAAAATAGGGCAATTCTACTGGATTATGATGGCACTGTGATGCCTCAAACATCTATAAATAAGAGCCCGAGTCAAGAAGTGATCTCCCTCATTAATACGCTTTGTGGTGATGTTAAAAACACTGTTTTTGTGGTCAGTGGGAGAGGAAGGGATAGTTTGAGCAAGTGGTTTTCTCCTTGCAAGAAACTCGGAATTGCTGCTGAACATGGTTATTTTATGAGGTGGTCTGCTGACAAGGATTGGGAAGTTTGCGGGCAGAGCAATGACTTTGGTTGGATACAGATAGCTGAACCAGTTATGAAACTCTACACAGAAGCCACCGATGGTTCTAGCATTGAAACCAAGGAGAGTGCCTTGGTTTGGCACCATCGAGATGCAGATTCTGGTTTTGGATCCAGTCAGGCTAAAGAGTTGCTCGACCATTTAGAAAGTGTGCTAGCAAATGAACCAGTTGCTGTGAAGAGTGGTCAGTATATTGTAGAAGTGAAGCCACAGGGTGTCAGTAAAGGCGTGGTTGCAGAAAAGATCTTCACATCAATGCACGAGACGGGGAAGCAGGCTGACTTTGTACTGTGTGTTGGCGACGATAGATCTGATGAGGATATGTTTGAGATCATTGGTAGTGCTATGAGAAACGGCATCCTCTCCTCTAATACCAGTGTTTTCGCTTGTACTGTTGGACAGAAACCCAGTAAAGCCAAGTACTATTTGGATGACCCTAGTGATGTTATTACAATGCTCGACGCTCTTGCAGATGCTTCAGATTCTCCGCCTTGCTCAGATGGTGAACCAGGCTCCCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005984 GO:0005991 GO:0005992 GO:0006793 GO:0006796 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009311 GO:0009312 GO:0009987 GO:0016051 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0033554 GO:0034637 GO:0042578 GO:0044237 GO:0044238 GO:0044249 GO:0044262 GO:0044424 GO:0044444 GO:0044464 GO:0046351 GO:0050896 GO:0051716 GO:0070413 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glyco_transf_20 Trehalose_PPase

Protein Analysis

855

Amino Acids

96.2

Weight (kDa)

5.93

Isoelectric Point (pI)

46.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_20	PF00982	60 - 543	9.6e-182	Glycosyltransferase family 20
Trehalose_PPase	PF02358	593 - 828	1.8e-79	Trehalose-phosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002700)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06410 AT1G06410 AT1G06410
fragaria_vesca	FvH4_3g07260 FvH4_6g27760 FvH4_6g27760
malus_domestica	MD00G1008700.v1.1 MD09G1234800.v1.1 MD10G1275100.v1.1
prunus_persica	Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.4G067300_v2.0.a1
pyrus_communis	pycom05g27390 pycom09g15300 pycom10g22970
rosa_chinensis	RchiOBHm_Chr2g0131021 RchiOBHm_Chr5g0011801
rosa_laevigata	RLG00000019161 RLG00000031862
rosa_multiflora	Rmu_sc0003629.1_g000054 Rmu_ssc0000357.1_g000005
rosa_roxburghii	Rroxscaffold_1G00064760
rosa_rugosa	Rorug02G0294400 Rorug04G0459400
rosa_samantha	Rh2AG346700 Rh2BG354100 Rh2CG332700 Rh2DG372200 Rh5AG090700 Rh5BG086300 Rh5CG100100 Rh5DG086400
rosa_wichuraiana	Rw0G018970 Rw2G028110 Rw2G028150 Rw5G007920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	2124
AccB7I	CCANNNNNTGG	2 cut(s)	628, 1624
AccI	GTMKAC	1 cut(s)	17
AccII	CGCG	2 cut(s)	66, 85
AccIII	TCCGGA	1 cut(s)	589
AciI	CCGC	8 cut(s)	76, 83, 220, 413, 853, 1109, 2013, 2531
AclWI	GGATC	4 cut(s)	736, 1700, 2148, 2161
AcsI	RAATTY	3 cut(s)	760, 1176, 1208
AcuI	CTGAAG	5 cut(s)	318, 1100, 1672, 1699, 2505
AdeI	CACNNNGTG	3 cut(s)	1460, 1610, 2258
AfaI	GTAC	5 cut(s)	1119, 1582, 2331, 2434, 2465
AfeI	AGCGCT	1 cut(s)	372
AfiI	CCNNNNNNNGG	8 cut(s)	59, 507, 628, 648, 1138, 1139, 1624, 2121
AgeI	ACCGGT	1 cut(s)	727
AgsI	TTSAA	7 cut(s)	283, 391, 661, 946, 1054, 1527, 2099
AhdI	GACNNNNNGTC	1 cut(s)	424
AjnI	CCWGG	1 cut(s)	2551
AleI	CACNNNNGTG	1 cut(s)	1313
Alw26I	GTCTC	3 cut(s)	217, 1261, 2300
AlwI	GGATC	4 cut(s)	736, 1700, 2148, 2161
AlwNI	CAGNNNCTG	3 cut(s)	1078, 2144, 2216
Ama87I	CYCGRG	2 cut(s)	1538, 1828
Aor13HI	TCCGGA	1 cut(s)	589
Aor51HI	AGCGCT	1 cut(s)	372
AoxI	GGCC	2 cut(s)	464, 1403
ApeKI	GCWGC	6 cut(s)	454, 545, 634, 1009, 1084, 1958
ApoI	RAATTY	3 cut(s)	760, 1176, 1208
AseI	ATTAAT	2 cut(s)	1200, 1854
AsiGI	ACCGGT	1 cut(s)	727
AspLEI	GCGC	2 cut(s)	373, 1554
AspS9I	GGNCC	3 cut(s)	175, 766, 1403
AsuC2I	CCSGG	1 cut(s)	43
AsuHPI	GGTGA	3 cut(s)	583, 1880, 2558
AsuII	TTCGAA	1 cut(s)	347
AsuNHI	GCTAGC	1 cut(s)	2197
AvaI	CYCGRG	2 cut(s)	1538, 1828
AvaII	GGWCC	2 cut(s)	175, 766
BamHI	GGATCC	1 cut(s)	2153
BanI	GGYRCC	1 cut(s)	2124
BanII	GRGCYC	1 cut(s)	1829
BarI	GAAGNNNNNNTAC	2 cut(s)	130, 162
BauI	CACGAG	1 cut(s)	2303
BbsI	GAAGAC	2 cut(s)	138, 1007
BbvCI	CCTCAGC	1 cut(s)	1503
BbvI	GCAGC	6 cut(s)	466, 532, 621, 996, 1096, 1945
BccI	CCATC	7 cut(s)	234, 630, 1316, 1784, 2078, 2136, 2537
BceAI	ACGGC	3 cut(s)	89, 1515, 2413
BcgI	CGANNNNNNTGC	4 cut(s)	1930, 1964, 2492, 2526
BciT130I	CCWGG	1 cut(s)	2553
BciVI	GTATCC	1 cut(s)	2031
BclI	TGATCA	2 cut(s)	127, 1732
BcnI	CCSGG	1 cut(s)	43
BcoDI	GTCTC	3 cut(s)	217, 1261, 2300
BfaI	CTAG	6 cut(s)	35, 1137, 1421, 2091, 2198, 2481
BfoI	RGCGCY	1 cut(s)	374
BfuI	GTATCC	1 cut(s)	2031
BglII	AGATCT	5 cut(s)	31, 1153, 1757, 2286, 2351
BisI	GCNGC	8 cut(s)	77, 413, 455, 546, 635, 1010, 1085, 1959
BlpI	GCTNAGC	1 cut(s)	216
BlsI	GCNGC	8 cut(s)	78, 414, 456, 547, 636, 1011, 1086, 1960
BmcAI	AGTACT	1 cut(s)	2465
Bme1390I	CCNGG	2 cut(s)	43, 2553
Bme18I	GGWCC	2 cut(s)	175, 766
BmeRI	GACNNNNNGTC	1 cut(s)	424
BmeT110I	CYCGRG	2 cut(s)	1538, 1828
BmgT120I	GGNCC	3 cut(s)	175, 766, 1403
BmiI	GGNNCC	5 cut(s)	779, 1536, 2126, 2155, 2557
BmrFI	CCNGG	2 cut(s)	43, 2553
BmrI	ACTGGG	1 cut(s)	2445
BmsI	GCATC	7 cut(s)	1065, 1096, 1197, 1791, 2125, 2409, 2506
BmtI	GCTAGC	1 cut(s)	2201
BmuI	ACTGGG	1 cut(s)	2445
BpiI	GAAGAC	2 cut(s)	138, 1007
Bpu10I	CCTNAGC	1 cut(s)	1503
Bpu1102I	GCTNAGC	1 cut(s)	216
Bpu14I	TTCGAA	1 cut(s)	347
BpuEI	CTTGAG	2 cut(s)	667, 1178
BpuMI	CCSGG	1 cut(s)	43
BsaBI	GATNNNNATC	3 cut(s)	126, 621, 899
BsaI	GGTCTC	1 cut(s)	217
BsaJI	CCNNGG	4 cut(s)	502, 1481, 2103, 2115
BsaWI	WCCGGW	5 cut(s)	52, 177, 226, 589, 727
BsaXI	ACNNNNNCTCC	6 cut(s)	235, 265, 299, 329, 830, 860
Bsc4I	CCNNNNNNNGG	8 cut(s)	59, 507, 628, 648, 1138, 1139, 1624, 2121
Bse118I	RCCGGY	2 cut(s)	101, 727
Bse1I	ACTGG	8 cut(s)	1225, 1604, 1785, 2054, 2157, 2210, 2418, 2451
Bse3DI	GCAATG	3 cut(s)	1071, 1287, 2029
Bse8I	GATNNNNATC	3 cut(s)	126, 621, 899
BseAI	TCCGGA	1 cut(s)	589
BseBI	CCWGG	1 cut(s)	2553
BseDI	CCNNGG	4 cut(s)	502, 1481, 2103, 2115
BseJI	GATNNNNATC	3 cut(s)	126, 621, 899
BseLI	CCNNNNNNNGG	8 cut(s)	59, 507, 628, 648, 1138, 1139, 1624, 2121
BseMI	GCAATG	3 cut(s)	1071, 1287, 2029
BseMII	CTCAG	4 cut(s)	105, 507, 1494, 2553
BseNI	ACTGG	8 cut(s)	1225, 1604, 1785, 2054, 2157, 2210, 2418, 2451
BseRI	GAGGAG	3 cut(s)	664, 667, 2398
BseXI	GCAGC	6 cut(s)	466, 532, 621, 996, 1096, 1945
BseYI	CCCAGC	2 cut(s)	1012, 1662
BsgI	GTGCAG	1 cut(s)	1378
Bsh1236I	CGCG	2 cut(s)	66, 85
Bsh1285I	CGRYCG	2 cut(s)	168, 520
BshFI	GGCC	2 cut(s)	466, 1405
BshNI	GGYRCC	1 cut(s)	2124
BshTI	ACCGGT	1 cut(s)	727
BsiEI	CGRYCG	2 cut(s)	168, 520
BsiHKCI	CYCGRG	2 cut(s)	1538, 1828
BsiSI	CCGG	7 cut(s)	42, 53, 102, 178, 227, 590, 728
BslI	CCNNNNNNNGG	8 cut(s)	59, 507, 628, 648, 1138, 1139, 1624, 2121
BsmAI	GTCTC	3 cut(s)	217, 1261, 2300
BsmBI	CGTCTC	1 cut(s)	2300
BsnI	GGCC	2 cut(s)	466, 1405
Bso31I	GGTCTC	1 cut(s)	217
BsoBI	CYCGRG	2 cut(s)	1538, 1828
Bsp119I	TTCGAA	1 cut(s)	347
Bsp1286I	GDGCHC	1 cut(s)	1829
Bsp13I	TCCGGA	1 cut(s)	589
Bsp1720I	GCTNAGC	1 cut(s)	216
Bsp19I	CCATGG	2 cut(s)	502, 1481
Bsp68I	TCGCGA	1 cut(s)	66
BspACI	CCGC	8 cut(s)	76, 83, 220, 413, 853, 1109, 2013, 2531
BspANI	GGCC	2 cut(s)	466, 1405
BspCNI	CTCAG	4 cut(s)	106, 506, 1495, 2552
BspEI	TCCGGA	1 cut(s)	589
BspFNI	CGCG	2 cut(s)	66, 85
BspHI	TCATGA	1 cut(s)	613
BspLI	GGNNCC	5 cut(s)	779, 1536, 2126, 2155, 2557
BspOI	GCTAGC	1 cut(s)	2201
BspPI	GGATC	4 cut(s)	736, 1700, 2148, 2161
BspQI	GCTCTTC	1 cut(s)	1406
BspT104I	TTCGAA	1 cut(s)	347
BspT107I	GGYRCC	1 cut(s)	2124
BspTNI	GGTCTC	1 cut(s)	217
BsrDI	GCAATG	3 cut(s)	1071, 1287, 2029
BsrFI	RCCGGY	2 cut(s)	101, 727
BsrI	ACTGG	8 cut(s)	1225, 1604, 1785, 2054, 2157, 2210, 2418, 2451
BssAI	RCCGGY	2 cut(s)	101, 727
BssECI	CCNNGG	4 cut(s)	502, 1481, 2103, 2115
BssNAI	GTATAC	1 cut(s)	18
BssSI	CACGAG	1 cut(s)	2303
BssT1I	CCWWGG	4 cut(s)	502, 1481, 2103, 2115
Bst1107I	GTATAC	1 cut(s)	18
Bst2BI	CACGAG	1 cut(s)	2303
Bst2UI	CCWGG	1 cut(s)	2553
Bst6I	CTCTTC	4 cut(s)	732, 1138, 1406, 2216
BstAPI	GCANNNNNTGC	1 cut(s)	1133
BstBI	TTCGAA	1 cut(s)	347
BstC8I	GCNNGC	7 cut(s)	951, 1170, 1361, 1418, 2015, 2199, 2319
BstDEI	CTNAG	7 cut(s)	114, 216, 493, 1262, 1457, 1503, 2539
BstDSI	CCRYGG	2 cut(s)	502, 1481
BstENI	CCTNNNNNAGG	1 cut(s)	646
BstFNI	CGCG	2 cut(s)	66, 85
BstH2I	RGCGCY	1 cut(s)	374
BstHHI	GCGC	2 cut(s)	373, 1554
BstMAI	GTCTC	3 cut(s)	217, 1261, 2300
BstMCI	CGRYCG	2 cut(s)	168, 520
BstMWI	GCNNNNNNNGC	6 cut(s)	82, 463, 542, 1084, 1133, 2019
BstNI	CCWGG	1 cut(s)	2553
BstNSI	RCATGY	2 cut(s)	484, 1420
BstSCI	CCNGG	2 cut(s)	41, 2551
BstUI	CGCG	2 cut(s)	66, 85
BstV1I	GCAGC	6 cut(s)	466, 532, 621, 996, 1096, 1945
BstV2I	GAAGAC	2 cut(s)	138, 1007
BstX2I	RGATCY	7 cut(s)	31, 741, 1153, 1757, 2153, 2286, 2351
BstYI	RGATCY	7 cut(s)	31, 741, 1153, 1757, 2153, 2286, 2351
BstZ17I	GTATAC	1 cut(s)	18
BsuI	GTATCC	1 cut(s)	2031
BsuRI	GGCC	2 cut(s)	466, 1405
BtgI	CCRYGG	2 cut(s)	502, 1481
BtgZI	GCGATG	1 cut(s)	1523
BtsIMutI	CAGTG	6 cut(s)	945, 1405, 1794, 1881, 1903, 2425
BtuMI	TCGCGA	1 cut(s)	66
Cac8I	GCNNGC	7 cut(s)	951, 1170, 1361, 1418, 2015, 2199, 2319
CaiI	CAGNNNCTG	3 cut(s)	1078, 2144, 2216
CciI	TCATGA	1 cut(s)	613
CfoI	GCGC	2 cut(s)	373, 1554
Cfr10I	RCCGGY	2 cut(s)	101, 727
Cfr13I	GGNCC	3 cut(s)	175, 766, 1403
CseI	GACGC	2 cut(s)	322, 2513
Csp6I	GTAC	5 cut(s)	1118, 1581, 2330, 2433, 2464
CspAI	ACCGGT	1 cut(s)	727
CviQI	GTAC	5 cut(s)	1118, 1581, 2330, 2433, 2464
DdeI	CTNAG	7 cut(s)	114, 216, 493, 1262, 1457, 1503, 2539
DraI	TTTAAA	1 cut(s)	1039
DraIII	CACNNNGTG	3 cut(s)	1460, 1610, 2258
DriI	GACNNNNNGTC	1 cut(s)	424
Eam1104I	CTCTTC	4 cut(s)	732, 1138, 1406, 2216
Eam1105I	GACNNNNNGTC	1 cut(s)	424
EarI	CTCTTC	4 cut(s)	732, 1138, 1406, 2216
EciI	GGCGGA	1 cut(s)	2520
Eco130I	CCWWGG	4 cut(s)	502, 1481, 2103, 2115
Eco24I	GRGCYC	1 cut(s)	1829
Eco31I	GGTCTC	1 cut(s)	217
Eco47I	GGWCC	2 cut(s)	175, 766
Eco47III	AGCGCT	1 cut(s)	372
Eco57I	CTGAAG	5 cut(s)	318, 1100, 1672, 1699, 2505
Eco88I	CYCGRG	2 cut(s)	1538, 1828
EcoNI	CCTNNNNNAGG	1 cut(s)	646
EcoRII	CCWGG	1 cut(s)	2551
EcoT14I	CCWWGG	4 cut(s)	502, 1481, 2103, 2115
EcoT38I	GRGCYC	1 cut(s)	1829
ErhI	CCWWGG	4 cut(s)	502, 1481, 2103, 2115
Esp3I	CGTCTC	1 cut(s)	2300
FalI	AAGNNNNNCTT	4 cut(s)	963, 995, 1245, 1277
FauI	CCCGC	2 cut(s)	846, 2006
FauNDI	CATATG	3 cut(s)	538, 921, 1342
FbaI	TGATCA	2 cut(s)	127, 1732
FblI	GTMKAC	1 cut(s)	17
Fnu4HI	GCNGC	8 cut(s)	77, 413, 455, 546, 635, 1010, 1085, 1959
FriOI	GRGCYC	1 cut(s)	1829
Fsp4HI	GCNGC	8 cut(s)	77, 413, 455, 546, 635, 1010, 1085, 1959
FspBI	CTAG	6 cut(s)	35, 1137, 1421, 2091, 2198, 2481
GlaI	GCGC	2 cut(s)	372, 1553
GluI	GCNGC	8 cut(s)	77, 413, 455, 546, 635, 1010, 1085, 1959
GsaI	CCCAGC	2 cut(s)	1016, 1666
HaeII	RGCGCY	1 cut(s)	374
HaeIII	GGCC	2 cut(s)	466, 1405
HapII	CCGG	7 cut(s)	42, 53, 102, 178, 227, 590, 728
HgaI	GACGC	2 cut(s)	322, 2513
HhaI	GCGC	2 cut(s)	373, 1554
Hin6I	GCGC	2 cut(s)	371, 1552
HinP1I	GCGC	2 cut(s)	371, 1552
HincII	GTYRAC	2 cut(s)	1048, 1477
HindII	GTYRAC	2 cut(s)	1048, 1477
HindIII	AAGCTT	1 cut(s)	947
HpaI	GTTAAC	1 cut(s)	1477
HpaII	CCGG	7 cut(s)	42, 53, 102, 178, 227, 590, 728
HphI	GGTGA	3 cut(s)	583, 1880, 2558
Hpy166II	GTNNAC	6 cut(s)	18, 293, 1048, 1477, 1583, 2549
Hpy8I	GTNNAC	6 cut(s)	18, 293, 1048, 1477, 1583, 2549
Hpy99I	CGWCG	3 cut(s)	338, 2348, 2507
HpyAV	CCTTC	8 cut(s)	277, 652, 711, 876, 965, 1461, 1647, 1902
HpyF10VI	GCNNNNNNNGC	6 cut(s)	82, 463, 542, 1084, 1133, 2019
HpyF3I	CTNAG	7 cut(s)	114, 216, 493, 1262, 1457, 1503, 2539
HspAI	GCGC	2 cut(s)	371, 1552
Kpn2I	TCCGGA	1 cut(s)	589
Ksp22I	TGATCA	2 cut(s)	127, 1732
KspAI	GTTAAC	1 cut(s)	1477
LguI	GCTCTTC	1 cut(s)	1406
LmnI	GCTCC	4 cut(s)	207, 243, 378, 2561
Lsp1109I	GCAGC	6 cut(s)	466, 532, 621, 996, 1096, 1945
LweI	GCATC	7 cut(s)	1065, 1096, 1197, 1791, 2125, 2409, 2506
MaeI	CTAG	6 cut(s)	35, 1137, 1421, 2091, 2198, 2481
MaeIII	GTNAC	2 cut(s)	1306, 1602
MflI	RGATCY	7 cut(s)	31, 741, 1153, 1757, 2153, 2286, 2351
MhlI	GDGCHC	1 cut(s)	1829
MlyI	GAGTC	3 cut(s)	257, 715, 1840
MmeI	TCCRAC	5 cut(s)	360, 803, 1196, 2015, 2419
MroI	TCCGGA	1 cut(s)	589
MseI	TTAA	6 cut(s)	981, 1038, 1200, 1476, 1854, 1875
MslI	CAYNNNNRTG	4 cut(s)	1313, 1799, 2133, 2297
MspA1I	CMGCKG	1 cut(s)	1313
MspI	CCGG	7 cut(s)	42, 53, 102, 178, 227, 590, 728
MspR9I	CCNGG	2 cut(s)	43, 2553
MvaI	CCWGG	1 cut(s)	2553
MvnI	CGCG	2 cut(s)	66, 85
MwoI	GCNNNNNNNGC	6 cut(s)	82, 463, 542, 1084, 1133, 2019
NciI	CCSGG	1 cut(s)	43
NcoI	CCATGG	2 cut(s)	502, 1481
NdeI	CATATG	3 cut(s)	538, 921, 1342
NheI	GCTAGC	1 cut(s)	2197
NlaIV	GGNNCC	5 cut(s)	779, 1536, 2126, 2155, 2557
NmeAIII	GCCGAG	1 cut(s)	1318
NmuCI	GTSAC	2 cut(s)	1306, 1602
NruI	TCGCGA	1 cut(s)	66
NspI	RCATGY	2 cut(s)	484, 1420
NspV	TTCGAA	1 cut(s)	347
OliI	CACNNNNGTG	1 cut(s)	1313
PaeI	GCATGC	1 cut(s)	1420
PagI	TCATGA	1 cut(s)	613
PciSI	GCTCTTC	1 cut(s)	1406
PcsI	WCGNNNNNNNCGW	2 cut(s)	155, 1505
PflMI	CCANNNNNTGG	2 cut(s)	628, 1624
PfoI	TCCNGGA	1 cut(s)	41
PinAI	ACCGGT	1 cut(s)	727
PkrI	GCNGC	8 cut(s)	78, 414, 456, 547, 636, 1011, 1086, 1960
Ple19I	CGATCG	2 cut(s)	168, 520
PleI	GAGTC	3 cut(s)	257, 715, 1839
PpsI	GAGTC	3 cut(s)	257, 715, 1839
PshBI	ATTAAT	2 cut(s)	1200, 1854
Psp6I	CCWGG	1 cut(s)	2551
PspFI	CCCAGC	2 cut(s)	1012, 1662
PspGI	CCWGG	1 cut(s)	2551
PspN4I	GGNNCC	5 cut(s)	779, 1536, 2126, 2155, 2557
PspPI	GGNCC	3 cut(s)	175, 766, 1403
PstNI	CAGNNNCTG	3 cut(s)	1078, 2144, 2216
PsuI	RGATCY	7 cut(s)	31, 741, 1153, 1757, 2153, 2286, 2351
PvuI	CGATCG	2 cut(s)	168, 520
PvuII	CAGCTG	1 cut(s)	1313
RruI	TCGCGA	1 cut(s)	66
RsaI	GTAC	5 cut(s)	1119, 1582, 2331, 2434, 2465
RsaNI	GTAC	5 cut(s)	1118, 1581, 2330, 2433, 2464
RseI	CAYNNNNRTG	4 cut(s)	1313, 1799, 2133, 2297
SapI	GCTCTTC	1 cut(s)	1406
SaqAI	TTAA	6 cut(s)	981, 1038, 1200, 1476, 1854, 1875
SatI	GCNGC	8 cut(s)	77, 413, 455, 546, 635, 1010, 1085, 1959
Sau96I	GGNCC	3 cut(s)	175, 766, 1403
ScaI	AGTACT	1 cut(s)	2465
SchI	GAGTC	3 cut(s)	257, 715, 1840
ScrFI	CCNGG	2 cut(s)	43, 2553
SduI	GDGCHC	1 cut(s)	1829
SfaNI	GCATC	7 cut(s)	1065, 1096, 1197, 1791, 2125, 2409, 2506
SfuI	TTCGAA	1 cut(s)	347
SinI	GGWCC	2 cut(s)	175, 766
SmiMI	CAYNNNNRTG	4 cut(s)	1313, 1799, 2133, 2297
SmlI	CTYRAG	2 cut(s)	646, 1157
SmoI	CTYRAG	2 cut(s)	646, 1157
SphI	GCATGC	1 cut(s)	1420
SsiI	CCGC	8 cut(s)	76, 83, 220, 413, 853, 1109, 2013, 2531
SspMI	CTAG	6 cut(s)	35, 1137, 1421, 2091, 2198, 2481
StyD4I	CCNGG	2 cut(s)	41, 2551
StyI	CCWWGG	4 cut(s)	502, 1481, 2103, 2115
TaqI	TCGA	9 cut(s)	164, 336, 347, 516, 576, 799, 2131, 2178, 2502
TaqII	GACCGA	1 cut(s)	510
TatI	WGTACW	4 cut(s)	1580, 2329, 2432, 2463
TauI	GCSGC	2 cut(s)	79, 415
Tru1I	TTAA	6 cut(s)	981, 1038, 1200, 1476, 1854, 1875
Tru9I	TTAA	6 cut(s)	981, 1038, 1200, 1476, 1854, 1875
TscAI	CASTG	6 cut(s)	945, 1405, 1801, 1888, 1903, 2425
TseFI	GTSAC	2 cut(s)	1306, 1602
TseI	GCWGC	6 cut(s)	454, 545, 634, 1009, 1084, 1958
Tsp45I	GTSAC	2 cut(s)	1306, 1602
TspGWI	ACGGA	1 cut(s)	147
TspRI	CASTG	6 cut(s)	945, 1405, 1801, 1888, 1903, 2425
Van91I	CCANNNNNTGG	2 cut(s)	628, 1624
VpaK11BI	GGWCC	2 cut(s)	175, 766
VspI	ATTAAT	2 cut(s)	1200, 1854
XagI	CCTNNNNNAGG	1 cut(s)	646
XapI	RAATTY	3 cut(s)	760, 1176, 1208
XceI	RCATGY	2 cut(s)	484, 1420
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2467
XmiI	GTMKAC	1 cut(s)	17
XspI	CTAG	6 cut(s)	35, 1137, 1421, 2091, 2198, 2481
ZrmI	AGTACT	1 cut(s)	2465

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.