Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002700

Physical Location & Seq

Genomic Coordinates Forward (+)

47117577 .. 47121379

Gene Structure 3803 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ50240

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2664 bp

ATGTCTTATGTATTGCCTGATATTTTCATTCTGAAATGGAATAAAGTGTCTCTTGTGAGGTTGTCCAGTTGTAAAAGGCTGAAAAAAAAAAAATCAAAAATGTCAAAGTCGTACATAAATCTTTTAGATTTGGCATCAGGGAACTTCCCTACAATGGAGGGGAGAAGGAAAAGGATGCCAAGGGTGAACACAGCTCCGGGAAATTTGTCAGATCTTGAGGATGATCAAGCACGCAGTGTGTCATCTGATCAACCATCCTCGATATCTTCAGATCGGGTGATTATTGTTGCAAACCAGCTTCCTTTGAAAGCAAAGCGAAGAGGGGATAATACCGGGTGGAATTTCAGTTGGAATGAGGATTCTTTGCTTTTGCAACTTAAGGATGGTCTGCCAGATGACATGGATGTTATTTATGTAGGGTCATTGAGGGTTCATGTTGATCCTGTTGACCAGGAGGATGTATCACATGTCTTACTAGATGAATTCAAGTGTGTTCCAACTTTTCTCCCGCCTGATATTCTGACTAAATTCTATGATGGTTTCTGCAAGAAGCATTTGTGGCCATTGTTTCATTACATGATGCCCTTTTCAGCTGAGCAAGGAGGTCGATTTGATCGGTCTTTGTGGGAAGCATATATTTCAGCTAATAAATTGTTTTTTCAAAGAGTGGTTGAGCTTATAAACCCAGATGAAGATTATATCTGGATTCATGATTACCATTTGATGGTGCTGCCAACCTTCTTGAGGAGGCGTTTTAGTCGGGTTAGGATGGGATTTTTCCTTCACAGCCCATTTCCTTCGTCTGAGATCTATAGAACTCTTCCTGTAAGAGAAGAAATACTTAAAGCGTTACTCAATTCAGATATTATTGGTTTCCACACCTTTGACTATGCTCGTCATTTCCTTACTTGTTGTAGCCGGATGTTGGGCTTGGTATATCAGTCAAGGAGAGGCTACTTAGGATTGGAATATTATGGAAGGACTATTAGGATCAAGATTATGCCAGTTGGAGTTCATATGGGTTGGATAGAGTCGGTGATGCAAATTGCAGATGAAGATTGTACTATGAGAGAGCTTGCACAAAAATTCAAAGGGAAAACAATGTTTCTTGGTGTAGATGATATGGACATTTTTAAAGGTATTAATTTGAAACTTTTAGCAATGGAGCAGATGCTCAAGCAACATCCTAACTGGCAGGGAAAGGCTGTGCTAGTCCAGATTGTAAACCCTGCTAGAGGTAAAGGGATAGATTTAGAGGAAATACGAGAAGAAATACAAGAAAACTGCCGGCAGATAAACGAAGAATTTGGGAAACCGGGCTATGAACCTATAATCATAATTGACAGGCCAGTTTCTATTAGTGAGAGAGTTTCCTATTACAACATTGCTGAGTGTGTTGTTGTGACAGCCGTTAGAGATGGGATGAACCTTACTCCTTACGAATATGTTGTCTGTAGGCAAGGAATATCTGGTTCCAAATCATGTTCAAACTTTGATGGCCCAAAGGAGAGCATGTTAGTGGTGTCAGAGTTTATTGGATGCTCTCCATCTCTTAGTGGGGCAATCCGTGTTAACCCATGGAATGTTGAAGCAACTGCAGAGGGAATGAATGTTGCTATATCAATGGAAGATTCAGAGAAACAATTACGGCACGAGAAGCATTACCGGTATATTAGTACGCACGATGTGGCTTATTGGTCACGCAGTTTCTTGCAAGACATGCAGAGAACTTGTGCAGACCATTTTAAGAGAAGATGTTGGGGAATTGGTTTTGGCTTTGGATTCAGAGTTGTGGCACTTGATCCTAATTTCAAAAAGCTTTCAATTGATGCTATTGTAACGGCTTACAAAGGAGCAAACACTAGAGCCATTATGTTGGATTATGATGGTACTGTAATGCCCCAGCACTCAATTGACAAGTCCCCTAGTCAGAAGGTAATCTCAATTATGAACACACTCTGTGCCGACCAAAAAAATACAGTTTTCATCGTCACTGGTAGAGGGAGGGAGAGCTTAAGCAAGTGGTTTTCTCCATGCCAGAGGCTTGGAATTGCAGCAGAACATGGATACTTCTTGAGATGGTCACAAAATGAGGAATGGGAAATCTGTCAGCAGAGTTTTGGGTTTGGTTGGATGAAAATTGCTGAACCAGTAATGAAATTGTATACTGAGGCTACTGATGGTTCTTCTATAGAAATTAAGGAAAGTGCTATGGTTTGGCAATATCGAGATGCAGACCCAGGGTTCGGGTCCTCCCAGGCAAAGGAGATGTTGGATCATCTAGAAAGTGTCTTGTCAAATGAACCTGTTGCTGTCAAGAAGGGTCAGTTTATTTTAGACGTCAAGCCTCAGGGAGTCAGTAAAGGGCTTGTTGCACAGAAGATTTTCACATCAATGGCTGAGAATGGAAAACATGCAGACTTTGTTCTTTGTATTGGTGATGACAGATCCGATGAGGACATGTTTGAGATATTTGGCCATGCGAAGTTGAAAGACATTCTTTCCCCCAATCCTGCAGTTTTTGCTTGCACAGTTGGACAAAAGCCAAGCAAGGCTACATATTACTTGGACGACACAACTGAAGTGATCACCATGCTTGAATCTCTTGCTGAAGCCTTTGATACTTTGCCACCCACTGACATAGGATATGAGAGCGATCCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005984 GO:0005991 GO:0005992 GO:0006793 GO:0006796 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009311 GO:0009312 GO:0009987 GO:0016051 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0033554 GO:0034637 GO:0042578 GO:0044237 GO:0044238 GO:0044249 GO:0044262 GO:0044424 GO:0044444 GO:0044464 GO:0046351 GO:0050896 GO:0051716 GO:0070413 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glyco_transf_20 Trehalose_PPase

Protein Analysis

887

Amino Acids

101.08

Weight (kDa)

6.18

Isoelectric Point (pI)

46.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_20	PF00982	92 - 575	1e-172	Glycosyltransferase family 20
Trehalose_PPase	PF02358	625 - 859	3.2e-76	Trehalose-phosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002700)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06410 AT1G06410 AT1G06410
fragaria_vesca	FvH4_3g07260 FvH4_6g27760 FvH4_6g27760
malus_domestica	MD00G1008700.v1.1 MD09G1234800.v1.1 MD10G1275100.v1.1
prunus_persica	Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.4G067300_v2.0.a1
pyrus_communis	pycom05g27390 pycom09g15300 pycom10g22970
rosa_chinensis	RchiOBHm_Chr2g0131021 RchiOBHm_Chr5g0011801
rosa_laevigata	RLG00000019161 RLG00000031862
rosa_multiflora	Rmu_sc0003629.1_g000054 Rmu_ssc0000357.1_g000005
rosa_roxburghii	Rroxscaffold_1G00064760
rosa_rugosa	Rorug02G0294400 Rorug04G0459400
rosa_samantha	Rh2AG346700 Rh2BG354100 Rh2CG332700 Rh2DG372200 Rh5AG090700 Rh5BG086300 Rh5CG100100 Rh5DG086400
rosa_wichuraiana	Rw0G018970 Rw2G028110 Rw2G028150 Rw5G007920

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	680
AatII	GACGTC	1 cut(s)	2343
AccB7I	CCANNNNNTGG	1 cut(s)	724
AccI	GTMKAC	1 cut(s)	2165
AciI	CCGC	1 cut(s)	509
AclWI	GGATC	6 cut(s)	434, 998, 1796, 2283, 2442, 2651
AcoI	YGGCCR	2 cut(s)	560, 2476
AcsI	RAATTY	6 cut(s)	202, 340, 482, 527, 1085, 1304
AcuI	CTGAAG	3 cut(s)	252, 2601, 2631
AcyI	GRCGYC	1 cut(s)	2340
AdeI	CACNNNGTG	3 cut(s)	236, 1687, 1961
AfaI	GTAC	4 cut(s)	113, 1063, 1678, 1891
AfiI	CCNNNNNNNGG	7 cut(s)	154, 724, 744, 925, 1235, 2246, 2263
AflII	CTTAAG	2 cut(s)	377, 2014
AflIII	ACRYGT	2 cut(s)	466, 2460
AgeI	ACCGGT	1 cut(s)	1665
AjnI	CCWGG	3 cut(s)	450, 2239, 2256
AluBI	AGCT	8 cut(s)	194, 298, 593, 644, 676, 1075, 1819, 2013
AluI	AGCT	8 cut(s)	194, 298, 593, 644, 676, 1075, 1819, 2013
Alw26I	GTCTC	1 cut(s)	54
AlwI	GGATC	6 cut(s)	434, 998, 1796, 2283, 2442, 2651
AoxI	GGCC	4 cut(s)	560, 1346, 1498, 2476
ApeKI	GCWGC	2 cut(s)	730, 2054
ApoI	RAATTY	6 cut(s)	202, 340, 482, 527, 1085, 1304
ArsI	GACNNNNNNTTYG	4 cut(s)	1434, 1466, 2228, 2260
AseI	ATTAAT	1 cut(s)	1143
AsiGI	ACCGGT	1 cut(s)	1665
Asp700I	GAANNNNTTC	1 cut(s)	2384
AspS9I	GGNCC	2 cut(s)	1499, 2250
AsuC2I	CCSGG	3 cut(s)	198, 334, 1317
AsuHPI	GGTGA	5 cut(s)	196, 289, 1048, 2450, 2581
AvaII	GGWCC	1 cut(s)	2250
AxyI	CCTNAGG	1 cut(s)	2349
BalI	TGGCCA	2 cut(s)	562, 2478
BauI	CACGAG	1 cut(s)	1652
BbvI	GCAGC	2 cut(s)	717, 2066
BceAI	ACGGC	3 cut(s)	1394, 1664, 1857
BcgI	CGANNNNNNTGC	2 cut(s)	587, 621
BciT130I	CCWGG	3 cut(s)	452, 2241, 2258
BciVI	GTATCC	1 cut(s)	2060
BclI	TGATCA	3 cut(s)	223, 247, 2586
BcnI	CCSGG	3 cut(s)	198, 334, 1317
BcoDI	GTCTC	1 cut(s)	54
BfaI	CTAG	6 cut(s)	476, 1211, 1233, 1863, 1926, 2282
BfmI	CTRYAG	5 cut(s)	811, 1453, 1596, 2190, 2514
BfrI	CTTAAG	2 cut(s)	377, 2014
BfuI	GTATCC	1 cut(s)	2060
BglII	AGATCT	2 cut(s)	211, 807
BisI	GCNGC	2 cut(s)	731, 2055
BlpI	GCTNAGC	1 cut(s)	594
BlsI	GCNGC	2 cut(s)	732, 2056
Bme1390I	CCNGG	6 cut(s)	198, 334, 452, 1317, 2241, 2258
Bme18I	GGWCC	1 cut(s)	2250
BmgT120I	GGNCC	2 cut(s)	1499, 2250
BmiI	GGNNCC	2 cut(s)	1474, 2251
BmrFI	CCNGG	6 cut(s)	198, 334, 452, 1317, 2241, 2258
BmsI	GCATC	8 cut(s)	143, 165, 570, 1029, 1161, 1529, 1819, 2221
Bpu1102I	GCTNAGC	1 cut(s)	594
BpuEI	CTTGAG	4 cut(s)	236, 763, 1160, 2095
BpuMI	CCSGG	3 cut(s)	198, 334, 1317
BsaHI	GRCGYC	1 cut(s)	2340
BsaJI	CCNNGG	5 cut(s)	179, 1577, 2239, 2240, 2256
BsaWI	WCCGGW	1 cut(s)	1665
BsaXI	ACNNNNNCTCC	2 cut(s)	1499, 1529
Bsc4I	CCNNNNNNNGG	7 cut(s)	154, 724, 744, 925, 1235, 2246, 2263
Bse118I	RCCGGY	2 cut(s)	1287, 1665
Bse1I	ACTGG	6 cut(s)	66, 1004, 1196, 1349, 1999, 2150
Bse21I	CCTNAGG	1 cut(s)	2349
Bse3DI	GCAATG	2 cut(s)	1167, 1383
BseBI	CCWGG	3 cut(s)	452, 2241, 2258
BseDI	CCNNGG	5 cut(s)	179, 1577, 2239, 2240, 2256
BseLI	CCNNNNNNNGG	7 cut(s)	154, 724, 744, 925, 1235, 2246, 2263
BseMI	GCAATG	2 cut(s)	1167, 1383
BseMII	CTCAG	6 cut(s)	585, 795, 1380, 2160, 2363, 2391
BseNI	ACTGG	6 cut(s)	66, 1004, 1196, 1349, 1999, 2150
BseRI	GAGGAG	1 cut(s)	760
BseXI	GCAGC	2 cut(s)	717, 2066
BseYI	CCCAGC	1 cut(s)	1902
BsgI	GTGCAG	1 cut(s)	1755
BshFI	GGCC	4 cut(s)	562, 1348, 1500, 2478
BshTI	ACCGGT	1 cut(s)	1665
BsiSI	CCGG	6 cut(s)	197, 333, 919, 1288, 1316, 1666
BslFI	GGGAC	1 cut(s)	1906
BslI	CCNNNNNNNGG	7 cut(s)	154, 724, 744, 925, 1235, 2246, 2263
BsmAI	GTCTC	1 cut(s)	54
BsmFI	GGGAC	1 cut(s)	1906
BsnI	GGCC	4 cut(s)	562, 1348, 1500, 2478
Bsp1720I	GCTNAGC	1 cut(s)	594
Bsp19I	CCATGG	1 cut(s)	1577
BspACI	CCGC	1 cut(s)	509
BspANI	GGCC	4 cut(s)	562, 1348, 1500, 2478
BspCNI	CTCAG	6 cut(s)	586, 796, 1381, 2161, 2362, 2392
BspHI	TCATGA	1 cut(s)	709
BspLI	GGNNCC	2 cut(s)	1474, 2251
BspMAI	CTGCAG	2 cut(s)	1600, 2518
BspPI	GGATC	6 cut(s)	434, 998, 1796, 2283, 2442, 2651
BspTI	CTTAAG	2 cut(s)	377, 2014
BsrDI	GCAATG	2 cut(s)	1167, 1383
BsrFI	RCCGGY	2 cut(s)	1287, 1665
BsrI	ACTGG	6 cut(s)	66, 1004, 1196, 1349, 1999, 2150
BssAI	RCCGGY	2 cut(s)	1287, 1665
BssECI	CCNNGG	5 cut(s)	179, 1577, 2239, 2240, 2256
BssNAI	GTATAC	1 cut(s)	2166
BssNI	GRCGYC	1 cut(s)	2340
BssSI	CACGAG	1 cut(s)	1652
BssT1I	CCWWGG	2 cut(s)	179, 1577
Bst1107I	GTATAC	1 cut(s)	2166
Bst2BI	CACGAG	1 cut(s)	1652
Bst2UI	CCWGG	3 cut(s)	452, 2241, 2258
Bst4CI	ACNGT	3 cut(s)	1894, 1981, 2533
Bst6I	CTCTTC	2 cut(s)	313, 825
BstACI	GRCGYC	1 cut(s)	2340
BstAFI	CTTAAG	2 cut(s)	377, 2014
BstAPI	GCANNNNNTGC	2 cut(s)	1720, 2522
BstC8I	GCNNGC	4 cut(s)	232, 1077, 1289, 2527
BstDEI	CTNAG	8 cut(s)	594, 804, 958, 1389, 1553, 2169, 2349, 2400
BstDSI	CCRYGG	1 cut(s)	1577
BstENI	CCTNNNNNAGG	2 cut(s)	742, 1233
BstMAI	GTCTC	1 cut(s)	54
BstMWI	GCNNNNNNNGC	4 cut(s)	559, 1657, 1720, 2522
BstNI	CCWGG	3 cut(s)	452, 2241, 2258
BstNSI	RCATGY	5 cut(s)	470, 1516, 1723, 2417, 2464
BstSCI	CCNGG	6 cut(s)	196, 332, 450, 1315, 2239, 2256
BstSFI	CTRYAG	5 cut(s)	811, 1453, 1596, 2190, 2514
BstV1I	GCAGC	2 cut(s)	717, 2066
BstX2I	RGATCY	3 cut(s)	211, 807, 2447
BstXI	CCANNNNNNTGG	2 cut(s)	1876, 2045
BstYI	RGATCY	3 cut(s)	211, 807, 2447
BstZ17I	GTATAC	1 cut(s)	2166
Bsu36I	CCTNAGG	1 cut(s)	2349
BsuI	GTATCC	1 cut(s)	2060
BsuRI	GGCC	4 cut(s)	562, 1348, 1500, 2478
BtgI	CCRYGG	1 cut(s)	1577
BtsI	GCAGTG	1 cut(s)	241
BtsIMutI	CAGTG	3 cut(s)	241, 1992, 2634
Cac8I	GCNNGC	4 cut(s)	232, 1077, 1289, 2527
CciI	TCATGA	1 cut(s)	709
Cfr10I	RCCGGY	2 cut(s)	1287, 1665
Cfr13I	GGNCC	2 cut(s)	1499, 2250
Csp6I	GTAC	4 cut(s)	112, 1062, 1677, 1890
CspAI	ACCGGT	1 cut(s)	1665
CviQI	GTAC	4 cut(s)	112, 1062, 1677, 1890
DdeI	CTNAG	8 cut(s)	594, 804, 958, 1389, 1553, 2169, 2349, 2400
DraI	TTTAAA	1 cut(s)	1135
DraIII	CACNNNGTG	3 cut(s)	236, 1687, 1961
EaeI	YGGCCR	2 cut(s)	560, 2476
Eam1104I	CTCTTC	2 cut(s)	313, 825
EarI	CTCTTC	2 cut(s)	313, 825
Eco130I	CCWWGG	2 cut(s)	179, 1577
Eco32I	GATATC	1 cut(s)	264
Eco47I	GGWCC	1 cut(s)	2250
Eco57I	CTGAAG	3 cut(s)	252, 2601, 2631
Eco81I	CCTNAGG	1 cut(s)	2349
EcoNI	CCTNNNNNAGG	2 cut(s)	742, 1233
EcoO109I	RGGNCCY	1 cut(s)	2250
EcoRI	GAATTC	1 cut(s)	482
EcoRII	CCWGG	3 cut(s)	450, 2239, 2256
EcoRV	GATATC	1 cut(s)	264
EcoT14I	CCWWGG	2 cut(s)	179, 1577
ErhI	CCWWGG	2 cut(s)	179, 1577
FalI	AAGNNNNNCTT	6 cut(s)	36, 68, 825, 857, 2484, 2516
FaqI	GGGAC	1 cut(s)	1906
FauI	CCCGC	1 cut(s)	516
FauNDI	CATATG	1 cut(s)	1017
FbaI	TGATCA	3 cut(s)	223, 247, 2586
FblI	GTMKAC	1 cut(s)	2165
Fnu4HI	GCNGC	2 cut(s)	731, 2055
Fsp4HI	GCNGC	2 cut(s)	731, 2055
FspBI	CTAG	6 cut(s)	476, 1211, 1233, 1863, 1926, 2282
GluI	GCNGC	2 cut(s)	731, 2055
GsaI	CCCAGC	1 cut(s)	1906
HaeIII	GGCC	4 cut(s)	562, 1348, 1500, 2478
HapII	CCGG	6 cut(s)	197, 333, 919, 1288, 1316, 1666
Hin1I	GRCGYC	1 cut(s)	2340
HincII	GTYRAC	2 cut(s)	448, 1573
HindII	GTYRAC	2 cut(s)	448, 1573
HindIII	AAGCTT	1 cut(s)	1817
HinfI	GANTC	7 cut(s)	359, 706, 1031, 1631, 1782, 2355, 2600
HpaI	GTTAAC	1 cut(s)	1573
HpaII	CCGG	6 cut(s)	197, 333, 919, 1288, 1316, 1666
HphI	GGTGA	5 cut(s)	196, 289, 1048, 2450, 2581
Hpy166II	GTNNAC	5 cut(s)	187, 448, 1225, 1573, 2166
Hpy8I	GTNNAC	5 cut(s)	187, 448, 1225, 1573, 2166
HpyAV	CCTTC	7 cut(s)	159, 748, 791, 807, 972, 1927, 2314
HpyCH4III	ACNGT	3 cut(s)	1894, 1981, 2533
HpyCH4IV	ACGT	1 cut(s)	2340
HpyF10VI	GCNNNNNNNGC	4 cut(s)	559, 1657, 1720, 2522
HpyF3I	CTNAG	8 cut(s)	594, 804, 958, 1389, 1553, 2169, 2349, 2400
HpySE526I	ACGT	1 cut(s)	2340
Hsp92I	GRCGYC	1 cut(s)	2340
KroI	GCCGGC	1 cut(s)	1287
KroNI	GCCGGC	1 cut(s)	1289
Ksp22I	TGATCA	3 cut(s)	223, 247, 2586
KspAI	GTTAAC	1 cut(s)	1573
LmnI	GCTCC	3 cut(s)	199, 1165, 1853
Lsp1109I	GCAGC	2 cut(s)	717, 2066
LweI	GCATC	8 cut(s)	143, 165, 570, 1029, 1161, 1529, 1819, 2221
MaeI	CTAG	6 cut(s)	476, 1211, 1233, 1863, 1926, 2282
MaeII	ACGT	1 cut(s)	2340
MaeIII	GTNAC	6 cut(s)	849, 1402, 1698, 1837, 1990, 2082
MfeI	CAATTG	2 cut(s)	1824, 1911
MflI	RGATCY	3 cut(s)	211, 807, 2447
MlsI	TGGCCA	2 cut(s)	562, 2478
MluNI	TGGCCA	2 cut(s)	562, 2478
MlyI	GAGTC	2 cut(s)	1040, 2364
MmeI	TCCRAC	8 cut(s)	329, 521, 988, 1004, 1857, 2111, 2253, 2515
Mox20I	TGGCCA	2 cut(s)	562, 2478
MroNI	GCCGGC	1 cut(s)	1287
MroXI	GAANNNNTTC	1 cut(s)	2384
MscI	TGGCCA	2 cut(s)	562, 2478
MseI	TTAA	8 cut(s)	378, 843, 1134, 1143, 1572, 1746, 2015, 2199
MslI	CAYNNNNRTG	2 cut(s)	1517, 2393
Msp20I	TGGCCA	2 cut(s)	562, 2478
MspA1I	CMGCKG	1 cut(s)	593
MspCI	CTTAAG	2 cut(s)	377, 2014
MspI	CCGG	6 cut(s)	197, 333, 919, 1288, 1316, 1666
MspR9I	CCNGG	6 cut(s)	198, 334, 452, 1317, 2241, 2258
MunI	CAATTG	2 cut(s)	1824, 1911
MvaI	CCWGG	3 cut(s)	452, 2241, 2258
MwoI	GCNNNNNNNGC	4 cut(s)	559, 1657, 1720, 2522
NaeI	GCCGGC	1 cut(s)	1289
NciI	CCSGG	3 cut(s)	198, 334, 1317
NcoI	CCATGG	1 cut(s)	1577
NdeI	CATATG	1 cut(s)	1017
NgoMIV	GCCGGC	1 cut(s)	1287
NlaIV	GGNNCC	2 cut(s)	1474, 2251
NmuCI	GTSAC	4 cut(s)	1402, 1698, 1990, 2082
NspI	RCATGY	5 cut(s)	470, 1516, 1723, 2417, 2464
PagI	TCATGA	1 cut(s)	709
PasI	CCCWGGG	1 cut(s)	2240
PciI	ACATGT	2 cut(s)	466, 2460
PdiI	GCCGGC	1 cut(s)	1289
PdmI	GAANNNNTTC	1 cut(s)	2384
PfeI	GAWTC	5 cut(s)	359, 706, 1631, 1782, 2600
PflMI	CCANNNNNTGG	1 cut(s)	724
PfoI	TCCNGGA	1 cut(s)	196
PinAI	ACCGGT	1 cut(s)	1665
PkrI	GCNGC	2 cut(s)	732, 2056
PleI	GAGTC	2 cut(s)	1039, 2363
PpsI	GAGTC	2 cut(s)	1039, 2363
PpuMI	RGGWCCY	1 cut(s)	2250
PscI	ACATGT	2 cut(s)	466, 2460
PshBI	ATTAAT	1 cut(s)	1143
PsiI	TTATAA	1 cut(s)	680
Psp5II	RGGWCCY	1 cut(s)	2250
Psp6I	CCWGG	3 cut(s)	450, 2239, 2256
PspFI	CCCAGC	1 cut(s)	1902
PspGI	CCWGG	3 cut(s)	450, 2239, 2256
PspN4I	GGNNCC	2 cut(s)	1474, 2251
PspPI	GGNCC	2 cut(s)	1499, 2250
PspPPI	RGGWCCY	1 cut(s)	2250
PstI	CTGCAG	2 cut(s)	1600, 2518
PsuI	RGATCY	3 cut(s)	211, 807, 2447
PvuII	CAGCTG	1 cut(s)	593
RsaI	GTAC	4 cut(s)	113, 1063, 1678, 1891
RsaNI	GTAC	4 cut(s)	112, 1062, 1677, 1890
RseI	CAYNNNNRTG	2 cut(s)	1517, 2393
SaqAI	TTAA	8 cut(s)	378, 843, 1134, 1143, 1572, 1746, 2015, 2199
SatI	GCNGC	2 cut(s)	731, 2055
Sau96I	GGNCC	2 cut(s)	1499, 2250
SchI	GAGTC	2 cut(s)	1040, 2364
ScrFI	CCNGG	6 cut(s)	198, 334, 452, 1317, 2241, 2258
SfaNI	GCATC	8 cut(s)	143, 165, 570, 1029, 1161, 1529, 1819, 2221
SfcI	CTRYAG	5 cut(s)	811, 1453, 1596, 2190, 2514
SinI	GGWCC	1 cut(s)	2250
SmiMI	CAYNNNNRTG	2 cut(s)	1517, 2393
SmlI	CTYRAG	6 cut(s)	215, 377, 742, 1175, 2014, 2074
SmoI	CTYRAG	6 cut(s)	215, 377, 742, 1175, 2014, 2074
SsiI	CCGC	1 cut(s)	509
SspI	AATATT	1 cut(s)	971
SspMI	CTAG	6 cut(s)	476, 1211, 1233, 1863, 1926, 2282
StyD4I	CCNGG	6 cut(s)	196, 332, 450, 1315, 2239, 2256
StyI	CCWWGG	2 cut(s)	179, 1577
TaaI	ACNGT	3 cut(s)	1894, 1981, 2533
TaiI	ACGT	1 cut(s)	2343
TaqI	TCGA	3 cut(s)	260, 607, 2227
TaqII	GACCGA	1 cut(s)	606
TatI	WGTACW	1 cut(s)	1061
TfiI	GAWTC	5 cut(s)	359, 706, 1631, 1782, 2600
Tru1I	TTAA	8 cut(s)	378, 843, 1134, 1143, 1572, 1746, 2015, 2199
Tru9I	TTAA	8 cut(s)	378, 843, 1134, 1143, 1572, 1746, 2015, 2199
TscAI	CASTG	3 cut(s)	241, 1999, 2641
TseFI	GTSAC	4 cut(s)	1402, 1698, 1990, 2082
TseI	GCWGC	2 cut(s)	730, 2054
Tsp45I	GTSAC	4 cut(s)	1402, 1698, 1990, 2082
TspGWI	ACGGA	2 cut(s)	1556, 2649
TspRI	CASTG	3 cut(s)	241, 1999, 2641
Van91I	CCANNNNNTGG	1 cut(s)	724
Vha464I	CTTAAG	2 cut(s)	377, 2014
VpaK11BI	GGWCC	1 cut(s)	2250
VspI	ATTAAT	1 cut(s)	1143
XagI	CCTNNNNNAGG	2 cut(s)	742, 1233
XapI	RAATTY	6 cut(s)	202, 340, 482, 527, 1085, 1304
XbaI	TCTAGA	1 cut(s)	2281
XceI	RCATGY	5 cut(s)	470, 1516, 1723, 2417, 2464
XmiI	GTMKAC	1 cut(s)	2165
XmnI	GAANNNNTTC	1 cut(s)	2384
XspI	CTAG	6 cut(s)	476, 1211, 1233, 1863, 1926, 2282
ZraI	GACGTC	1 cut(s)	2341

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.