Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0002700

Physical Location & Seq

Genomic Coordinates Forward (+)

7517200 .. 7520600

Gene Structure 3401 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG086300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2565 bp

ATGATGTCCAAATCGTATACCAACCTTTTGGATCTAGCTTCCGGCAACTTTCCGATAATGGGTCGGGAAAGGAAGAGGCTTCCACGAGTAATGACCGTTGCCGGGGTTATATCGGAGCTTGACGATGATAACGCCAATAGTGTGTCGTCGGATGTTCCGTCGTCGATTGTGCAGGACCGGATTATTATTGTGGCTAATCAGCTGCCGGTAAAAGCCAAGCGTAGACCTGATAACAAAGGATGGAGTTTTAGTTGGGATGAGGACTCATTGCTATTGCAGTTAAAGGATGGTTTGCCCGAAGAAATGGAGGTTTTGTATGTAGGTTCTTTGAATGTAGAGGTGGATTCGAATGAACAAGATGATGTGTCGCAGCTTCTGTTGGATAGGTTTAAGTGTGTTCCAGCCTTCCTGCCGGCCGACATTTTGACCAAGTTCTATCATGGGTTTTGTAAGCAGCAGTTGTGGCCTTTGTTTCATTACATGCTTCCGTTTTCAGCAAATCACGGTGGAAGGTTCGACCGGACTTTGTGGGAGGCGTATGTGGCTGCAAATAAGATCTTCTCACAAAGGGTGATTGAAGTCATAAATCCTGAGGATGATTATGTATGGATTCATGATTACCATTTAATGGTGCTGCCGACCTTCTTGAGGAGGAGGTTCAATAGATTGAGAATGGGGTTTTTTCTTCACAGCCCCTTCCCGTCATCAGAAATTTACAGGACTCTACCTGTCAGGGAAGAGATTCTTAAGGCTCTTTTAAATTCGGACCTTATTGGTTTCCACACTTTTGATTATGCTCGGCATTTCTTGTCTTGTTGCAGTCGAATGTTGGGTTTGGAGTATCAGTCAAAAAGAGGTTATATTGGGCTGGATTATTATGGAAGGACAGTCGGGATAAAGATCATGCCTGTTGGGATTCACATGGGGCAGATTCACTCAGTGTTAAAACTTGCAGATAAGGAGTGGAGGGTAGGAGAACTAAAACAAAAGTTTGAAGGAAAGACTGTGTTGCTTGGTGTTGATGACATGGACATCTTTAAAGGTGTCAATTTGAAGCTCTTGGCAATGGAACAGATGCTGAAGCAGCACCCTAAGTGGCAGGGGAGAGCAGTTTTGGTACAGATAGCAAATCCAGCTAGGGGAAGAGGGAAAGATCTTGAGGAAACACAGGCTGAAATCTATGCAAGCGTCAAGAGGATAAATGAAAAATATGGTCTGAATGGATATGAACCCATTGTCTTCATTGATAAACCAGTCTCTCTTAGTGAAAGAGTTGCGTATTACACAGTAGCCGAGTGTGTGGTGGTCACTGCTGTGAGGGATGGGATGAATCTTATTCCATATGAGTACATTGTATGCAGGCAAGGGAACTCTGGATCAGAATCTGAATCAGAATCCAGTGGTCCCAAGAAGAGCATGCTGGTTGTATCAGAGTTCATTGGATGTTCACCTTCACTTAGTGGTGCAATTCGGGTTAACCCATGGAATGTTGAATCAACAGCTGAGGCCATGAATGAGGTAATTTCAATGGCTGAACCGGAGAAACAGTTGAGACATGAGAAGCATTATAGGTATGTTAGTACACATGATGTGGCTTACTGGTCACGAAGTGTTTTCCAGGACATGGAGAGGACGTGCAAAGACCATTTCAGAAGACGTTGCTGGGGAATTGGTCTGGGTTTTGGCTTCAGGGTTATAGCACTGGATCCTAACTTCAGAAAACTGTCTATTGATGCCATTGTGAATGCCTATGTGAAATCTAAGAGGAGGGCTATATTGTTAGATTATGATGGCACTGTGATGCCTCAAACATCTATAAATAAGACCCCAAGTCAAGAGGTCATCTCCCTAATCAATACACTTTGTGGTGATGTTAAAAACACTGTTTTTGTGGTCAGTGGAAGAGGAAGGGATAGTTTGAGCAAGTGGTTTTCTCCTTGCAAGAAACTTGGAATTGCTGCTGAACACGGTTATTTTGTAAGGTGGTCTGCCGACAAGGATTGGGAAATTTGTGGACAGAGTAGTGATTTTGGGTGGATACAGATAGCTGAGCCAGTTATGAAATTGTATACAGAAGCCACTGATGGATCTTCTATTGAAACCAAGGAGAGTGCATTGGTTTGGCACCATCGAGATGCCGACCCGGGTTTTGGATCCAGCCAGGCTAAAGAATTGTTGGACCATCTAGAAAGTGTGTTGGCAAACGAACCAGTAGCTGCCAAGAGTGGTCAATATATTGTAGAAGTAAAGCCACAGGGTGTTAGTAAAGGCCTGGTCGCTGAAAAGGTATTCACATCGATGCACGAGAGTGGGAAGCAGGCAGATTTTGTTTTGTGCATTGGTGATGATAGATCTGATGAGGACATGTTTGAGATTATCGACAATGCGCTCAATAATGATGTCATCTCCTCAAATACGAGTGTTTTTGCATGCACCGTTGGACAGAAACCTAGTAAAGCCAAGTACTATTTGGATGACCCTACTGATGTCATAATGATGCTTGAGGCTCTTGCAGACGCTTCAGATTCTCCGCCGTCCTCAGACGGCGAAGCAGGAAGCCCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005984 GO:0005991 GO:0005992 GO:0006793 GO:0006796 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009311 GO:0009312 GO:0009987 GO:0016051 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0033554 GO:0034637 GO:0042578 GO:0044237 GO:0044238 GO:0044249 GO:0044262 GO:0044424 GO:0044444 GO:0044464 GO:0046351 GO:0050896 GO:0051716 GO:0070413 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glyco_transf_20 Trehalose_PPase

Protein Analysis

854

Amino Acids

96.25

Weight (kDa)

5.82

Isoelectric Point (pI)

46.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_20	PF00982	60 - 543	3.7e-182	Glycosyltransferase family 20
Trehalose_PPase	PF02358	593 - 827	1e-80	Trehalose-phosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002700)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06410 AT1G06410 AT1G06410
fragaria_vesca	FvH4_3g07260 FvH4_6g27760 FvH4_6g27760
malus_domestica	MD00G1008700.v1.1 MD09G1234800.v1.1 MD10G1275100.v1.1
prunus_persica	Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.4G067300_v2.0.a1
pyrus_communis	pycom05g27390 pycom09g15300 pycom10g22970
rosa_chinensis	RchiOBHm_Chr2g0131021 RchiOBHm_Chr5g0011801
rosa_laevigata	RLG00000019161 RLG00000031862
rosa_multiflora	Rmu_sc0003629.1_g000054 Rmu_ssc0000357.1_g000005
rosa_roxburghii	Rroxscaffold_1G00064760
rosa_rugosa	Rorug02G0294400 Rorug04G0459400
rosa_samantha	Rh2AG346700 Rh2BG354100 Rh2CG332700 Rh2DG372200 Rh5AG090700 Rh5BG086300 Rh5CG100100 Rh5DG086400
rosa_wichuraiana	Rw0G018970 Rw2G028110 Rw2G028150 Rw5G007920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	2124
AccB7I	CCANNNNNTGG	2 cut(s)	628, 1624
AccI	GTMKAC	3 cut(s)	17, 223, 2069
AciI	CCGC	1 cut(s)	2531
AclWI	GGATC	7 cut(s)	39, 1384, 1700, 1713, 2095, 2148, 2161
AcoI	YGGCCR	1 cut(s)	414
AcsI	RAATTY	3 cut(s)	711, 760, 2007
AcuI	CTGAAG	4 cut(s)	1100, 1672, 1699, 2505
AdeI	CACNNNGTG	5 cut(s)	940, 1460, 1610, 1865, 2258
AfaI	GTAC	4 cut(s)	1119, 1349, 1582, 2465
AfiI	CCNNNNNNNGG	7 cut(s)	59, 102, 628, 648, 1139, 1624, 2150
AflII	CTTAAG	1 cut(s)	746
AflIII	ACRYGT	1 cut(s)	2364
AgsI	TTSAA	8 cut(s)	331, 578, 661, 995, 1054, 1493, 1527, 2099
AhdI	GACNNNNNGTC	1 cut(s)	1830
AjiI	CACGTC	1 cut(s)	1635
AjnI	CCWGG	3 cut(s)	1617, 2160, 2271
AleI	CACNNNNGTG	2 cut(s)	1313, 2307
AluBI	AGCT	9 cut(s)	38, 118, 202, 373, 1057, 1136, 1502, 2048, 2216
AluI	AGCT	9 cut(s)	38, 118, 202, 373, 1057, 1136, 1502, 2048, 2216
Alw26I	GTCTC	2 cut(s)	1261, 1546
AlwI	GGATC	7 cut(s)	39, 1384, 1700, 1713, 2095, 2148, 2161
AlwNI	CAGNNNCTG	4 cut(s)	376, 1078, 1385, 2216
Ama87I	CYCGRG	1 cut(s)	2143
AoxI	GGCC	4 cut(s)	414, 464, 1506, 2269
ApeKI	GCWGC	8 cut(s)	202, 370, 454, 545, 634, 1084, 1958, 2216
ApoI	RAATTY	3 cut(s)	711, 760, 2007
ArsI	GACNNNNNNTTYG	2 cut(s)	2132, 2164
Asp700I	GAANNNNTTC	1 cut(s)	741
AspLEI	GCGC	1 cut(s)	2389
AspS9I	GGNCC	4 cut(s)	175, 766, 1403, 2179
AsuC2I	CCSGG	3 cut(s)	103, 2144, 2145
AsuHPI	GGTGA	4 cut(s)	583, 1440, 1880, 2354
AsuII	TTCGAA	1 cut(s)	347
AvaI	CYCGRG	1 cut(s)	2143
AvaII	GGWCC	4 cut(s)	175, 766, 1403, 2179
AxyI	CCTNAGG	1 cut(s)	591
BamHI	GGATCC	2 cut(s)	1705, 2153
BanI	GGYRCC	1 cut(s)	2124
BauI	CACGAG	2 cut(s)	84, 2303
BbsI	GAAGAC	2 cut(s)	1231, 1660
BbvCI	CCTCAGC	1 cut(s)	1503
BbvI	GCAGC	8 cut(s)	189, 382, 466, 532, 621, 1096, 1945, 2203
BccI	CCATC	7 cut(s)	234, 281, 1316, 1784, 2078, 2136, 2190
BceAI	ACGGC	2 cut(s)	2518, 2560
BciT130I	CCWGG	3 cut(s)	1619, 2162, 2273
BciVI	GTATCC	1 cut(s)	2031
BcnI	CCSGG	3 cut(s)	103, 2144, 2145
BcoDI	GTCTC	2 cut(s)	1261, 1546
BfaI	CTAG	4 cut(s)	35, 1137, 2186, 2451
BfrI	CTTAAG	1 cut(s)	746
BfuI	GTATCC	1 cut(s)	2031
BglII	AGATCT	3 cut(s)	555, 1153, 2351
BisI	GCNGC	8 cut(s)	203, 371, 455, 546, 635, 1085, 1959, 2217
BlpI	GCTNAGC	1 cut(s)	2049
BlsI	GCNGC	8 cut(s)	204, 372, 456, 547, 636, 1086, 1960, 2218
BmcAI	AGTACT	1 cut(s)	2465
Bme1390I	CCNGG	6 cut(s)	103, 1619, 2144, 2145, 2162, 2273
Bme18I	GGWCC	4 cut(s)	175, 766, 1403, 2179
BmeRI	GACNNNNNGTC	1 cut(s)	1830
BmeT110I	CYCGRG	1 cut(s)	2143
BmgBI	CACGTC	1 cut(s)	1635
BmgT120I	GGNCC	4 cut(s)	175, 766, 1403, 2179
BmiI	GGNNCC	4 cut(s)	1405, 1707, 2126, 2155
BmrFI	CCNGG	6 cut(s)	103, 1619, 2144, 2145, 2162, 2273
BmsI	GCATC	6 cut(s)	1065, 1723, 1791, 2125, 2289, 2487
BpiI	GAAGAC	2 cut(s)	1231, 1660
BplI	GAGNNNNNCTC	2 cut(s)	1829, 1861
Bpu10I	CCTNAGC	1 cut(s)	1503
Bpu1102I	GCTNAGC	1 cut(s)	2049
Bpu14I	TTCGAA	1 cut(s)	347
BpuEI	CTTGAG	3 cut(s)	667, 1178, 2522
BpuMI	CCSGG	3 cut(s)	103, 2144, 2145
Bsa29I	ATCGAT	1 cut(s)	2297
BsaBI	GATNNNNATC	2 cut(s)	899, 1381
BsaJI	CCNNGG	4 cut(s)	102, 1481, 2103, 2143
BsaWI	WCCGGW	3 cut(s)	177, 519, 1537
Bsc4I	CCNNNNNNNGG	7 cut(s)	59, 102, 628, 648, 1139, 1624, 2150
Bse118I	RCCGGY	2 cut(s)	205, 412
Bse1I	ACTGG	6 cut(s)	1253, 1398, 1604, 1707, 2054, 2210
Bse21I	CCTNAGG	1 cut(s)	591
Bse3DI	GCAATG	2 cut(s)	266, 1071
Bse8I	GATNNNNATC	2 cut(s)	899, 1381
BseBI	CCWGG	3 cut(s)	1619, 2162, 2273
BseCI	ATCGAT	1 cut(s)	2297
BseDI	CCNNGG	4 cut(s)	102, 1481, 2103, 2143
BseGI	GGATG	9 cut(s)	157, 245, 262, 292, 601, 1327, 1332, 1448, 2479
BseJI	GATNNNNATC	2 cut(s)	899, 1381
BseLI	CCNNNNNNNGG	7 cut(s)	59, 102, 628, 648, 1139, 1624, 2150
BseMI	GCAATG	2 cut(s)	266, 1071
BseMII	CTCAG	5 cut(s)	582, 951, 1494, 2040, 2553
BseNI	ACTGG	6 cut(s)	1253, 1398, 1604, 1707, 2054, 2210
BseRI	GAGGAG	4 cut(s)	664, 667, 1780, 2398
BseX3I	CGGCCG	1 cut(s)	414
BseXI	GCAGC	8 cut(s)	189, 382, 466, 532, 621, 1096, 1945, 2203
BseYI	CCCAGC	1 cut(s)	1662
BsgI	GTGCAG	1 cut(s)	191
Bsh1285I	CGRYCG	2 cut(s)	417, 520
BshFI	GGCC	4 cut(s)	416, 466, 1508, 2271
BshNI	GGYRCC	1 cut(s)	2124
BshVI	ATCGAT	1 cut(s)	2297
BsiEI	CGRYCG	2 cut(s)	417, 520
BsiHKCI	CYCGRG	1 cut(s)	2143
BsiSI	CCGG	8 cut(s)	42, 102, 178, 206, 413, 520, 1538, 2144
BslFI	GGGAC	1 cut(s)	1389
BslI	CCNNNNNNNGG	7 cut(s)	59, 102, 628, 648, 1139, 1624, 2150
BsmAI	GTCTC	2 cut(s)	1261, 1546
BsmFI	GGGAC	1 cut(s)	1389
BsmI	GAATGC	1 cut(s)	1750
BsnI	GGCC	4 cut(s)	416, 466, 1508, 2271
BsoBI	CYCGRG	1 cut(s)	2143
Bsp119I	TTCGAA	1 cut(s)	347
Bsp143I	GATC	9 cut(s)	31, 555, 900, 1153, 1376, 1705, 2087, 2153, 2351
Bsp1720I	GCTNAGC	1 cut(s)	2049
Bsp19I	CCATGG	1 cut(s)	1481
BspACI	CCGC	1 cut(s)	2531
BspANI	GGCC	4 cut(s)	416, 466, 1508, 2271
BspCNI	CTCAG	5 cut(s)	583, 950, 1495, 2041, 2552
BspDI	ATCGAT	1 cut(s)	2297
BspHI	TCATGA	1 cut(s)	613
BspLI	GGNNCC	4 cut(s)	1405, 1707, 2126, 2155
BspPI	GGATC	7 cut(s)	39, 1384, 1700, 1713, 2095, 2148, 2161
BspQI	GCTCTTC	1 cut(s)	1406
BspT104I	TTCGAA	1 cut(s)	347
BspT107I	GGYRCC	1 cut(s)	2124
BspTI	CTTAAG	1 cut(s)	746
BsrDI	GCAATG	2 cut(s)	266, 1071
BsrFI	RCCGGY	2 cut(s)	205, 412
BsrI	ACTGG	6 cut(s)	1253, 1398, 1604, 1707, 2054, 2210
BssAI	RCCGGY	2 cut(s)	205, 412
BssECI	CCNNGG	4 cut(s)	102, 1481, 2103, 2143
BssMI	GATC	9 cut(s)	31, 555, 900, 1153, 1376, 1705, 2087, 2153, 2351
BssNAI	GTATAC	2 cut(s)	18, 2070
BssSI	CACGAG	2 cut(s)	84, 2303
BssT1I	CCWWGG	2 cut(s)	1481, 2103
Bst1107I	GTATAC	2 cut(s)	18, 2070
Bst2BI	CACGAG	2 cut(s)	84, 2303
Bst2UI	CCWGG	3 cut(s)	1619, 2162, 2273
Bst6I	CTCTTC	5 cut(s)	68, 732, 1138, 1406, 1897
BstAFI	CTTAAG	1 cut(s)	746
BstBI	TTCGAA	1 cut(s)	347
BstC8I	GCNNGC	6 cut(s)	414, 1186, 1361, 1418, 2319, 2431
BstDEI	CTNAG	9 cut(s)	591, 937, 1092, 1262, 1457, 1503, 1761, 2049, 2539
BstDSI	CCRYGG	1 cut(s)	1481
BstENI	CCTNNNNNAGG	1 cut(s)	646
BstF5I	GGATG	9 cut(s)	157, 245, 262, 292, 601, 1327, 1332, 1448, 2479
BstHHI	GCGC	1 cut(s)	2389
BstKTI	GATC	9 cut(s)	34, 558, 903, 1156, 1379, 1708, 2090, 2156, 2354
BstMAI	GTCTC	2 cut(s)	1261, 1546
BstMBI	GATC	9 cut(s)	31, 555, 900, 1153, 1376, 1705, 2087, 2153, 2351
BstMCI	CGRYCG	2 cut(s)	417, 520
BstMWI	GCNNNNNNNGC	4 cut(s)	463, 542, 1084, 1133
BstNI	CCWGG	3 cut(s)	1619, 2162, 2273
BstNSI	RCATGY	4 cut(s)	484, 1420, 2368, 2433
BstSCI	CCNGG	6 cut(s)	101, 1617, 2142, 2143, 2160, 2271
BstV1I	GCAGC	8 cut(s)	189, 382, 466, 532, 621, 1096, 1945, 2203
BstV2I	GAAGAC	2 cut(s)	1231, 1660
BstX2I	RGATCY	7 cut(s)	31, 555, 1153, 1705, 2087, 2153, 2351
BstXI	CCANNNNNNTGG	1 cut(s)	28
BstYI	RGATCY	7 cut(s)	31, 555, 1153, 1705, 2087, 2153, 2351
BstZ17I	GTATAC	2 cut(s)	18, 2070
BstZI	CGGCCG	1 cut(s)	414
Bsu15I	ATCGAT	1 cut(s)	2297
Bsu36I	CCTNAGG	1 cut(s)	591
BsuI	GTATCC	1 cut(s)	2031
BsuRI	GGCC	4 cut(s)	416, 466, 1508, 2271
BsuTUI	ATCGAT	1 cut(s)	2297
BtgI	CCRYGG	1 cut(s)	1481
BtrI	CACGTC	1 cut(s)	1635
BtsCI	GGATG	9 cut(s)	157, 245, 262, 292, 601, 1327, 1332, 1448, 2479
BtsI	GCAGTG	1 cut(s)	1308
BtsIMutI	CAGTG	8 cut(s)	945, 1308, 1405, 1700, 1794, 1881, 1903, 2079
Cac8I	GCNNGC	6 cut(s)	414, 1186, 1361, 1418, 2319, 2431
CaiI	CAGNNNCTG	4 cut(s)	376, 1078, 1385, 2216
CciI	TCATGA	1 cut(s)	613
CfoI	GCGC	1 cut(s)	2389
Cfr10I	RCCGGY	2 cut(s)	205, 412
Cfr13I	GGNCC	4 cut(s)	175, 766, 1403, 2179
Cfr9I	CCCGGG	1 cut(s)	2143
ClaI	ATCGAT	1 cut(s)	2297
CseI	GACGC	2 cut(s)	1177, 2525
Csp6I	GTAC	4 cut(s)	1118, 1348, 1581, 2464
CviQI	GTAC	4 cut(s)	1118, 1348, 1581, 2464
DdeI	CTNAG	9 cut(s)	591, 937, 1092, 1262, 1457, 1503, 1761, 2049, 2539
DpnI	GATC	9 cut(s)	33, 557, 902, 1155, 1378, 1707, 2089, 2155, 2353
DpnII	GATC	9 cut(s)	31, 555, 900, 1153, 1376, 1705, 2087, 2153, 2351
DraI	TTTAAA	2 cut(s)	759, 1039
DraIII	CACNNNGTG	5 cut(s)	940, 1460, 1610, 1865, 2258
DriI	GACNNNNNGTC	1 cut(s)	1830
EaeI	YGGCCR	1 cut(s)	414
EagI	CGGCCG	1 cut(s)	414
Eam1104I	CTCTTC	5 cut(s)	68, 732, 1138, 1406, 1897
Eam1105I	GACNNNNNGTC	1 cut(s)	1830
EarI	CTCTTC	5 cut(s)	68, 732, 1138, 1406, 1897
EciI	GGCGGA	1 cut(s)	2520
EclXI	CGGCCG	1 cut(s)	414
Eco130I	CCWWGG	2 cut(s)	1481, 2103
Eco147I	AGGCCT	1 cut(s)	2271
Eco47I	GGWCC	4 cut(s)	175, 766, 1403, 2179
Eco52I	CGGCCG	1 cut(s)	414
Eco57I	CTGAAG	4 cut(s)	1100, 1672, 1699, 2505
Eco81I	CCTNAGG	1 cut(s)	591
Eco88I	CYCGRG	1 cut(s)	2143
EcoNI	CCTNNNNNAGG	1 cut(s)	646
EcoRII	CCWGG	3 cut(s)	1617, 2160, 2271
EcoT14I	CCWWGG	2 cut(s)	1481, 2103
ErhI	CCWWGG	2 cut(s)	1481, 2103
FalI	AAGNNNNNCTT	2 cut(s)	729, 761
FaqI	GGGAC	1 cut(s)	1389
FauNDI	CATATG	1 cut(s)	1342
FblI	GTMKAC	3 cut(s)	17, 223, 2069
Fnu4HI	GCNGC	8 cut(s)	203, 371, 455, 546, 635, 1085, 1959, 2217
FokI	GGATG	9 cut(s)	164, 252, 269, 299, 608, 1334, 1339, 1455, 2486
Fsp4HI	GCNGC	8 cut(s)	203, 371, 455, 546, 635, 1085, 1959, 2217
FspBI	CTAG	4 cut(s)	35, 1137, 2186, 2451
GlaI	GCGC	1 cut(s)	2388
GluI	GCNGC	8 cut(s)	203, 371, 455, 546, 635, 1085, 1959, 2217
GsaI	CCCAGC	1 cut(s)	1666
HaeIII	GGCC	4 cut(s)	416, 466, 1508, 2271
HapII	CCGG	8 cut(s)	42, 102, 178, 206, 413, 520, 1538, 2144
HgaI	GACGC	2 cut(s)	1177, 2525
HhaI	GCGC	1 cut(s)	2389
Hin6I	GCGC	1 cut(s)	2387
HinP1I	GCGC	1 cut(s)	2387
HincII	GTYRAC	1 cut(s)	1477
HindII	GTYRAC	1 cut(s)	1477
HpaI	GTTAAC	1 cut(s)	1477
HpaII	CCGG	8 cut(s)	42, 102, 178, 206, 413, 520, 1538, 2144
HphI	GGTGA	4 cut(s)	583, 1440, 1880, 2354
Hpy166II	GTNNAC	7 cut(s)	18, 224, 1448, 1477, 1583, 2015, 2070
Hpy8I	GTNNAC	7 cut(s)	18, 224, 1448, 1477, 1583, 2015, 2070
Hpy99I	CGWCG	3 cut(s)	151, 163, 166
HpyAV	CCTTC	8 cut(s)	415, 504, 652, 706, 876, 989, 1461, 1902
HpyCH4IV	ACGT	2 cut(s)	1634, 1657
HpyF10VI	GCNNNNNNNGC	4 cut(s)	463, 542, 1084, 1133
HpyF3I	CTNAG	9 cut(s)	591, 937, 1092, 1262, 1457, 1503, 1761, 2049, 2539
HpySE526I	ACGT	2 cut(s)	1634, 1657
HspAI	GCGC	1 cut(s)	2387
KroI	GCCGGC	1 cut(s)	412
KroNI	GCCGGC	1 cut(s)	414
KspAI	GTTAAC	1 cut(s)	1477
Kzo9I	GATC	9 cut(s)	31, 555, 900, 1153, 1376, 1705, 2087, 2153, 2351
LguI	GCTCTTC	1 cut(s)	1406
LmnI	GCTCC	1 cut(s)	115
Lsp1109I	GCAGC	8 cut(s)	189, 382, 466, 532, 621, 1096, 1945, 2203
LweI	GCATC	6 cut(s)	1065, 1723, 1791, 2125, 2289, 2487
MaeI	CTAG	4 cut(s)	35, 1137, 2186, 2451
MaeII	ACGT	2 cut(s)	1634, 1657
MaeIII	GTNAC	2 cut(s)	1306, 1602
MalI	GATC	9 cut(s)	33, 557, 902, 1155, 1378, 1707, 2089, 2155, 2353
MboI	GATC	9 cut(s)	31, 555, 900, 1153, 1376, 1705, 2087, 2153, 2351
MflI	RGATCY	7 cut(s)	31, 555, 1153, 1705, 2087, 2153, 2351
MlyI	GAGTC	2 cut(s)	257, 715
MmeI	TCCRAC	4 cut(s)	129, 360, 2157, 2419
MroNI	GCCGGC	1 cut(s)	412
MroXI	GAANNNNTTC	1 cut(s)	741
MseI	TTAA	9 cut(s)	281, 390, 626, 747, 758, 944, 1038, 1476, 1875
MslI	CAYNNNNRTG	6 cut(s)	1313, 1799, 2133, 2297, 2307, 2495
MspA1I	CMGCKG	2 cut(s)	202, 1502
MspCI	CTTAAG	1 cut(s)	746
MspI	CCGG	8 cut(s)	42, 102, 178, 206, 413, 520, 1538, 2144
MspR9I	CCNGG	6 cut(s)	103, 1619, 2144, 2145, 2162, 2273
Mva1269I	GAATGC	1 cut(s)	1750
MvaI	CCWGG	3 cut(s)	1619, 2162, 2273
MwoI	GCNNNNNNNGC	4 cut(s)	463, 542, 1084, 1133
NaeI	GCCGGC	1 cut(s)	414
NciI	CCSGG	3 cut(s)	103, 2144, 2145
NcoI	CCATGG	1 cut(s)	1481
NdeI	CATATG	1 cut(s)	1342
NdeII	GATC	9 cut(s)	31, 555, 900, 1153, 1376, 1705, 2087, 2153, 2351
NgoMIV	GCCGGC	1 cut(s)	412
NlaIV	GGNNCC	4 cut(s)	1405, 1707, 2126, 2155
NmeAIII	GCCGAG	2 cut(s)	778, 1318
NmuCI	GTSAC	2 cut(s)	1306, 1602
NspI	RCATGY	4 cut(s)	484, 1420, 2368, 2433
NspV	TTCGAA	1 cut(s)	347
OliI	CACNNNNGTG	2 cut(s)	1313, 2307
PaeI	GCATGC	2 cut(s)	1420, 2433
PagI	TCATGA	1 cut(s)	613
PceI	AGGCCT	1 cut(s)	2271
PciI	ACATGT	1 cut(s)	2364
PciSI	GCTCTTC	1 cut(s)	1406
PcsI	WCGNNNNNNNCGW	1 cut(s)	155
PctI	GAATGC	1 cut(s)	1750
PdiI	GCCGGC	1 cut(s)	414
PdmI	GAANNNNTTC	1 cut(s)	741
PflMI	CCANNNNNTGG	2 cut(s)	628, 1624
PfoI	TCCNGGA	1 cut(s)	1617
PkrI	GCNGC	8 cut(s)	204, 372, 456, 547, 636, 1086, 1960, 2218
PleI	GAGTC	2 cut(s)	257, 715
PpsI	GAGTC	2 cut(s)	257, 715
PscI	ACATGT	1 cut(s)	2364
Psp6I	CCWGG	3 cut(s)	1617, 2160, 2271
PspFI	CCCAGC	1 cut(s)	1662
PspGI	CCWGG	3 cut(s)	1617, 2160, 2271
PspN4I	GGNNCC	4 cut(s)	1405, 1707, 2126, 2155
PspPI	GGNCC	4 cut(s)	175, 766, 1403, 2179
PstNI	CAGNNNCTG	4 cut(s)	376, 1078, 1385, 2216
PsuI	RGATCY	7 cut(s)	31, 555, 1153, 1705, 2087, 2153, 2351
PvuII	CAGCTG	2 cut(s)	202, 1502
RsaI	GTAC	4 cut(s)	1119, 1349, 1582, 2465
RsaNI	GTAC	4 cut(s)	1118, 1348, 1581, 2464
RseI	CAYNNNNRTG	6 cut(s)	1313, 1799, 2133, 2297, 2307, 2495
SapI	GCTCTTC	1 cut(s)	1406
SaqAI	TTAA	9 cut(s)	281, 390, 626, 747, 758, 944, 1038, 1476, 1875
SatI	GCNGC	8 cut(s)	203, 371, 455, 546, 635, 1085, 1959, 2217
Sau3AI	GATC	9 cut(s)	31, 555, 900, 1153, 1376, 1705, 2087, 2153, 2351
Sau96I	GGNCC	4 cut(s)	175, 766, 1403, 2179
ScaI	AGTACT	1 cut(s)	2465
SchI	GAGTC	2 cut(s)	257, 715
ScrFI	CCNGG	6 cut(s)	103, 1619, 2144, 2145, 2162, 2273
SfaNI	GCATC	6 cut(s)	1065, 1723, 1791, 2125, 2289, 2487
SfuI	TTCGAA	1 cut(s)	347
SinI	GGWCC	4 cut(s)	175, 766, 1403, 2179
SmaI	CCCGGG	1 cut(s)	2145
SmiMI	CAYNNNNRTG	6 cut(s)	1313, 1799, 2133, 2297, 2307, 2495
SmlI	CTYRAG	4 cut(s)	646, 746, 1157, 2501
SmoI	CTYRAG	4 cut(s)	646, 746, 1157, 2501
SphI	GCATGC	2 cut(s)	1420, 2433
SseBI	AGGCCT	1 cut(s)	2271
SsiI	CCGC	1 cut(s)	2531
SspMI	CTAG	4 cut(s)	35, 1137, 2186, 2451
StuI	AGGCCT	1 cut(s)	2271
StyD4I	CCNGG	6 cut(s)	101, 1617, 2142, 2143, 2160, 2271
StyI	CCWWGG	2 cut(s)	1481, 2103
TaiI	ACGT	2 cut(s)	1637, 1660
TaqI	TCGA	7 cut(s)	164, 347, 516, 823, 2131, 2297, 2379
TatI	WGTACW	3 cut(s)	1347, 1580, 2463
Tru1I	TTAA	9 cut(s)	281, 390, 626, 747, 758, 944, 1038, 1476, 1875
Tru9I	TTAA	9 cut(s)	281, 390, 626, 747, 758, 944, 1038, 1476, 1875
TscAI	CASTG	8 cut(s)	945, 1315, 1405, 1707, 1801, 1888, 1903, 2086
TseFI	GTSAC	2 cut(s)	1306, 1602
TseI	GCWGC	8 cut(s)	202, 370, 454, 545, 634, 1084, 1958, 2216
Tsp45I	GTSAC	2 cut(s)	1306, 1602
TspGWI	ACGGA	2 cut(s)	147, 477
TspMI	CCCGGG	1 cut(s)	2143
TspRI	CASTG	8 cut(s)	945, 1315, 1405, 1707, 1801, 1888, 1903, 2086
Van91I	CCANNNNNTGG	2 cut(s)	628, 1624
Vha464I	CTTAAG	1 cut(s)	746
VpaK11BI	GGWCC	4 cut(s)	175, 766, 1403, 2179
XagI	CCTNNNNNAGG	1 cut(s)	646
XapI	RAATTY	3 cut(s)	711, 760, 2007
XbaI	TCTAGA	1 cut(s)	2185
XceI	RCATGY	4 cut(s)	484, 1420, 2368, 2433
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2467
XmaI	CCCGGG	1 cut(s)	2143
XmiI	GTMKAC	3 cut(s)	17, 223, 2069
XmnI	GAANNNNTTC	1 cut(s)	741
XspI	CTAG	4 cut(s)	35, 1137, 2186, 2451
ZrmI	AGTACT	1 cut(s)	2465

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.