Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0002700

Physical Location & Seq

Genomic Coordinates Reverse (-)

9435820 .. 9440654

Gene Structure 4835 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G113100.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2523 bp

ATGTCGAAGTCATACGTAAATCTTTTAGATTTGGCATCAGGGAACTTCCCTACAATGGAGGGGAAAAGGAGACGGTTTCCGAGGGTGAATACAGCTCCGGGCAATTTGTCAGATGTTGATGATGATCAAGCACGTAGTGTGTCATCTGATCAGCCATCATCAATTGCTTCAGATCGGATGATTATTGTAGCAAACCAACTTCCTGTGAAAGCAAAGAGGAGAGAGGATAATAAAGGTTGGATTTTCAGTTGGAATGAGGATGCTTTGCTATTGCACCTTAAGGATGGGCTACCAGAAGACATGGAGGTTCTTTATGTAGGGTCATTGAAGGTCTCTGTTGATCCTAGAGAGCAGGATGATGTGTCCCAGGTCTTATTGGATAAATTTAGATGTGTTCCTACTTTTCTACCCCCTGATATTCTGTCAAAATTCTATGATGGTTTCTGCAAGAGGCATTTGTGGCCACTGTTTCATTACATGTTGCCATTTTCAGCTGATCAAGGAGGCCGATTTGATCGATCTTTGTGGGAAGCTTATATTTTAGCTAATAAGTTGTTTTTTCAAAAGGTAGTTGAGCTTATAAACCCCGATGAAGATTATGTCTGGATTCATGATTACCATTTGATGGTGCTGCCAACCTTTTTAAGGAGGCGTTTTAATCGGGTTAGGATCGGATTTTTCCTTCACAGCCCTTTTCCCTCATCTGAGATCTATAGCACTCTTACTGTAAGAGAAGAAATACTTAAGGCTTTACTCAACTCCGATGTTATTGGATTCCATACCTTTGACTATGCTCGTCATTTCCTCACTTGTTGCAGTCGGATGTTGGGCTTGGCATATCAGTCAAAGAGAGGTTACTTAGGATTGGAATTTTATGGAAGGACCATTAGGATCAAGATTATGCCAGTTGGGGTTCATATGGACTGGATAGAGTCGGTGATGAAAGTGGCGGATGAGGAGAGTAAAATGGCGGAGCTTAAACAAAAATTTCAAGGGAAAACAATGTTGCTTGGTGTAGATGATACTGACATTTTTAAGGGTATTAATTTGAAACTTCTAGCAATGGAACAAATGCTGAAGCAGCATCCCGGGTGGCAGGGAAAGGCTGTGCTGGTCCAGATTCTAAACCCTGCTAGAGGTAAAGGGATAGATTTTGAAGAAATACTTGCAGAAATACAAGAAAGCTGCCGGAGGATCAATGAACAATTTGGGAGACCAGGCTATGAGCCAATAATTCTTATTGACAGGGCAGTTTCCATTAATGAGAGGATTTGCTATTACAACATTGCTGAGTGTGTTGTTGTGACAGCTGTTAGAGATGGGATGAACCTTACTCCGTATGAATATGTTGTCTGTAGACAGGGAATAACTGGTTCTAAATCTTGTTCAAATTTCGATGGCCCAAAGAAGAGCATGTTAGTGGTGTCAGAATTTATTGGATGTTCTCCATCACTTAGTGGAGCAATCCGTATCAACCCATGGAATGTTGAAACAACTGGGGAGGCAATGAATGTCGCCATTTCAATGCTTGATTCAGAGAAAGAATTAAGACACGAGAAGCATTATCGGTATGTAAGTACACATGGTGTGGCTTATTGGTCCCGCAGTTTCTTGCAAGACATGCAGAGAGCTTGTGCAGACCATTTTAAGAGAAGATGCTGGGGAATTGGTTTTGGCTTCGGATTCAGAGTTGTGGCCCTTGATCCTAATTTCAGAAAGCTGTCACTTGATGCCATTATATCTGCTTATAGGGGGGCACAGACTAGGGCCATTCTGTTGGACTACGATGGTACTGTAATGCCCCAGAACTCAATTGACAAGTCCCCCAGTCAGAAGGTAATCTCAATTATGAACACACTTTGTACGGACCCAAAAAATACAGTTTTCATTGTCACTGGCAGAGGGAGGGAGAGCTTAAGCAAGTGGTTTTCTCCCTGTCAAAGGCTTGGAATTGCGGCAGAACATGGGTACTTCTTGAGATGGTCGCAAAATCAGGAGTGGGAAATCTGTCGTCAGGGTTTTGAGTTTGGCTGGATGAAAATCGTTGAACCAGTGATGCAATTGTATACCGAGTCTACTGATGGTTCTTCTATTGAAACTAAGGAAAGTGCTTTGGTTTGGCAATATCGTGATGCAGACCCAGGTTTTGGGTCCTCCCAGGCAAAGGAGATGTTAGACCATTTAGAGAGTGTCTTAGCAAATGAACCTGTTGCTGTCAAGAAGGGTCAGTTCATTGTAGAAGTAAAGCCTCAGGAAGTTAGTAAAGGGCACGTAGCAGAGAAGATTTTCTCATCAATGGCTGAGAATGGAAAACATGCAGACTTTGTGCTCTGTATTGGTGATGACAGATCTGATGAGGACATGTTTGAGATATTTGATAATGCTATGCTGAGAAGTACTCTCTCTCCCAATCCTTCAGTTTTCGCTTGCACGGTTGGACAAAAGCCTAGCAAGGCAACTTATTATTTGGATGATACAACGGAAGTGATAAACATGCTTAAATGTCTTTCTGAAAGCCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005984 GO:0005991 GO:0005992 GO:0006793 GO:0006796 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009311 GO:0009312 GO:0009987 GO:0016051 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0033554 GO:0034637 GO:0042578 GO:0044237 GO:0044238 GO:0044249 GO:0044262 GO:0044424 GO:0044444 GO:0044464 GO:0046351 GO:0050896 GO:0051716 GO:0070413 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glyco_transf_20 Trehalose_PPase

Protein Analysis

841

Amino Acids

95.69

Weight (kDa)

6.19

Isoelectric Point (pI)

47.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002700)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06410 AT1G06410 AT1G06410
fragaria_vesca	FvH4_3g07260 FvH4_6g27760 FvH4_6g27760
malus_domestica	MD00G1008700.v1.1 MD09G1234800.v1.1 MD10G1275100.v1.1
prunus_persica	Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.4G067300_v2.0.a1
pyrus_communis	pycom05g27390 pycom09g15300 pycom10g22970
rosa_chinensis	RchiOBHm_Chr2g0131021 RchiOBHm_Chr5g0011801
rosa_laevigata	RLG00000019161 RLG00000031862
rosa_multiflora	Rmu_sc0003629.1_g000054 Rmu_ssc0000357.1_g000005
rosa_roxburghii	Rroxscaffold_1G00064760
rosa_rugosa	Rorug02G0294400 Rorug04G0459400
rosa_samantha	Rh2AG346700 Rh2BG354100 Rh2CG332700 Rh2DG372200 Rh5AG090700 Rh5BG086300 Rh5CG100100 Rh5DG086400
rosa_wichuraiana	Rw0G018970 Rw2G028110 Rw2G028150 Rw5G007920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	581
AccB7I	CCANNNNNTGG	2 cut(s)	625, 2147
AccI	GTMKAC	3 cut(s)	1357, 2066, 2075
AciI	CCGC	4 cut(s)	950, 971, 1603, 1955
AclWI	GGATC	5 cut(s)	335, 677, 899, 1202, 1697
AcoI	YGGCCR	1 cut(s)	461
AcsI	RAATTY	6 cut(s)	383, 428, 869, 986, 1390, 1430
AcuI	CTGAAG	3 cut(s)	153, 1097, 2400
AdeI	CACNNNGTG	3 cut(s)	137, 1457, 1586
AfaI	GTAC	5 cut(s)	1579, 1792, 1864, 1970, 2398
AfiI	CCNNNNNNNGG	7 cut(s)	55, 625, 645, 1136, 1941, 2147, 2164
AflII	CTTAAG	3 cut(s)	278, 743, 1915
AflIII	ACRYGT	2 cut(s)	477, 2361
AjnI	CCWGG	4 cut(s)	366, 1216, 2140, 2157
Alw21I	GWGCWC	1 cut(s)	2331
Alw26I	GTCTC	3 cut(s)	64, 337, 1207
AlwI	GGATC	5 cut(s)	335, 677, 899, 1202, 1697
Ama87I	CYCGRG	1 cut(s)	1088
AoxI	GGCC	5 cut(s)	461, 505, 1399, 1695, 1767
ApeKI	GCWGC	3 cut(s)	631, 1081, 1185
ApoI	RAATTY	6 cut(s)	383, 428, 869, 986, 1390, 1430
ArsI	GACNNNNNNTTYG	2 cut(s)	2129, 2161
AseI	ATTAAT	2 cut(s)	1044, 1260
Asp700I	GAANNNNTTC	1 cut(s)	2285
AspS9I	GGNCC	8 cut(s)	882, 1114, 1400, 1599, 1696, 1767, 1867, 2151
AsuC2I	CCSGG	3 cut(s)	99, 1089, 1090
AsuHPI	GGTGA	3 cut(s)	97, 949, 2351
AvaI	CYCGRG	1 cut(s)	1088
AvaII	GGWCC	5 cut(s)	882, 1114, 1599, 1867, 2151
AxyI	CCTNAGG	1 cut(s)	2250
BaeGI	GKGCMC	2 cut(s)	1759, 2271
BalI	TGGCCA	1 cut(s)	463
BauI	CACGAG	1 cut(s)	1553
BbsI	GAAGAC	1 cut(s)	303
Bbv12I	GWGCWC	1 cut(s)	2331
BbvI	GCAGC	3 cut(s)	618, 1093, 1172
BciT130I	CCWGG	4 cut(s)	368, 1218, 2142, 2159
BclI	TGATCA	3 cut(s)	124, 148, 496
BcnI	CCSGG	3 cut(s)	99, 1089, 1090
BcoDI	GTCTC	3 cut(s)	64, 337, 1207
BfaI	CTAG	5 cut(s)	345, 1058, 1134, 1764, 2448
BfmI	CTRYAG	2 cut(s)	712, 1354
BfrI	CTTAAG	3 cut(s)	278, 743, 1915
BglII	AGATCT	2 cut(s)	708, 2348
BisI	GCNGC	4 cut(s)	632, 1082, 1186, 1956
BlsI	GCNGC	4 cut(s)	633, 1083, 1187, 1957
BmcAI	AGTACT	1 cut(s)	2398
Bme1390I	CCNGG	7 cut(s)	99, 368, 1089, 1090, 1218, 2142, 2159
Bme18I	GGWCC	5 cut(s)	882, 1114, 1599, 1867, 2151
BmeT110I	CYCGRG	1 cut(s)	1088
BmgT120I	GGNCC	8 cut(s)	882, 1114, 1400, 1599, 1696, 1767, 1867, 2151
BmiI	GGNNCC	3 cut(s)	1601, 1869, 2152
BmrFI	CCNGG	7 cut(s)	99, 368, 1089, 1090, 1218, 2142, 2159
BmrI	ACTGGG	2 cut(s)	1506, 1821
BmsI	GCATC	7 cut(s)	44, 250, 1093, 1646, 1720, 2046, 2122
BmuI	ACTGGG	2 cut(s)	1506, 1821
BpiI	GAAGAC	1 cut(s)	303
BplI	GAGNNNNNCTC	2 cut(s)	2383, 2415
BpuEI	CTTGAG	1 cut(s)	1996
BpuMI	CCSGG	3 cut(s)	99, 1089, 1090
Bsa29I	ATCGAT	1 cut(s)	517
BsaAI	YACGTR	3 cut(s)	16, 134, 2272
BsaBI	GATNNNNATC	2 cut(s)	123, 2039
BsaI	GGTCTC	2 cut(s)	337, 1207
BsaJI	CCNNGG	6 cut(s)	80, 366, 1088, 1478, 2140, 2157
BsaXI	ACNNNNNCTCC	2 cut(s)	2389, 2419
Bsc4I	CCNNNNNNNGG	7 cut(s)	55, 625, 645, 1136, 1941, 2147, 2164
Bse1I	ACTGG	7 cut(s)	905, 929, 1375, 1501, 1827, 1900, 2051
Bse21I	CCTNAGG	1 cut(s)	2250
Bse3DI	GCAATG	3 cut(s)	1068, 1284, 1512
Bse8I	GATNNNNATC	2 cut(s)	123, 2039
BseBI	CCWGG	4 cut(s)	368, 1218, 2142, 2159
BseCI	ATCGAT	1 cut(s)	517
BseDI	CCNNGG	6 cut(s)	80, 366, 1088, 1478, 2140, 2157
BseJI	GATNNNNATC	2 cut(s)	123, 2039
BseLI	CCNNNNNNNGG	7 cut(s)	55, 625, 645, 1136, 1941, 2147, 2164
BseMI	GCAATG	3 cut(s)	1068, 1284, 1512
BseMII	CTCAG	5 cut(s)	696, 1281, 2264, 2292, 2381
BseNI	ACTGG	7 cut(s)	905, 929, 1375, 1501, 1827, 1900, 2051
BseRI	GAGGAG	2 cut(s)	232, 971
BseSI	GKGCMC	2 cut(s)	1759, 2271
BseXI	GCAGC	3 cut(s)	618, 1093, 1172
BseYI	CCCAGC	1 cut(s)	1659
BsgI	GTGCAG	1 cut(s)	1656
BshFI	GGCC	5 cut(s)	463, 507, 1401, 1697, 1769
BshVI	ATCGAT	1 cut(s)	517
BsiHKAI	GWGCWC	1 cut(s)	2331
BsiHKCI	CYCGRG	1 cut(s)	1088
BsiSI	CCGG	3 cut(s)	98, 1089, 1189
BslFI	GGGAC	3 cut(s)	349, 1585, 1807
BslI	CCNNNNNNNGG	7 cut(s)	55, 625, 645, 1136, 1941, 2147, 2164
BsmAI	GTCTC	3 cut(s)	64, 337, 1207
BsmBI	CGTCTC	1 cut(s)	64
BsmFI	GGGAC	3 cut(s)	349, 1585, 1807
BsnI	GGCC	5 cut(s)	463, 507, 1401, 1697, 1769
Bso31I	GGTCTC	2 cut(s)	337, 1207
BsoBI	CYCGRG	1 cut(s)	1088
Bsp1286I	GDGCHC	3 cut(s)	1759, 2271, 2331
Bsp19I	CCATGG	1 cut(s)	1478
BspACI	CCGC	4 cut(s)	950, 971, 1603, 1955
BspANI	GGCC	5 cut(s)	463, 507, 1401, 1697, 1769
BspCNI	CTCAG	5 cut(s)	697, 1282, 2263, 2293, 2382
BspDI	ATCGAT	1 cut(s)	517
BspHI	TCATGA	1 cut(s)	610
BspLI	GGNNCC	3 cut(s)	1601, 1869, 2152
BspPI	GGATC	5 cut(s)	335, 677, 899, 1202, 1697
BspQI	GCTCTTC	1 cut(s)	1403
BspTI	CTTAAG	3 cut(s)	278, 743, 1915
BspTNI	GGTCTC	2 cut(s)	337, 1207
BsrDI	GCAATG	3 cut(s)	1068, 1284, 1512
BsrI	ACTGG	7 cut(s)	905, 929, 1375, 1501, 1827, 1900, 2051
BssECI	CCNNGG	6 cut(s)	80, 366, 1088, 1478, 2140, 2157
BssNAI	GTATAC	1 cut(s)	2067
BssSI	CACGAG	1 cut(s)	1553
BssT1I	CCWWGG	1 cut(s)	1478
Bst1107I	GTATAC	1 cut(s)	2067
Bst2BI	CACGAG	1 cut(s)	1553
Bst2UI	CCWGG	4 cut(s)	368, 1218, 2142, 2159
Bst4CI	ACNGT	6 cut(s)	75, 468, 727, 1795, 1882, 2434
Bst6I	CTCTTC	1 cut(s)	1403
BstAFI	CTTAAG	3 cut(s)	278, 743, 1915
BstAPI	GCANNNNNTGC	1 cut(s)	1621
BstBAI	YACGTR	3 cut(s)	16, 134, 2272
BstC8I	GCNNGC	1 cut(s)	2428
BstDEI	CTNAG	9 cut(s)	705, 859, 1290, 1454, 2100, 2194, 2250, 2301, 2390
BstDSI	CCRYGG	1 cut(s)	1478
BstENI	CCTNNNNNAGG	3 cut(s)	643, 1134, 1939
BstMAI	GTCTC	3 cut(s)	64, 337, 1207
BstMWI	GCNNNNNNNGC	3 cut(s)	460, 1081, 1621
BstNI	CCWGG	4 cut(s)	368, 1218, 2142, 2159
BstNSI	RCATGY	6 cut(s)	481, 1417, 1624, 2318, 2365, 2497
BstSCI	CCNGG	7 cut(s)	97, 366, 1087, 1088, 1216, 2140, 2157
BstSFI	CTRYAG	2 cut(s)	712, 1354
BstSLI	GKGCMC	2 cut(s)	1759, 2271
BstSNI	TACGTA	1 cut(s)	16
BstV1I	GCAGC	3 cut(s)	618, 1093, 1172
BstV2I	GAAGAC	1 cut(s)	303
BstX2I	RGATCY	2 cut(s)	708, 2348
BstXI	CCANNNNNNTGG	1 cut(s)	1777
BstYI	RGATCY	2 cut(s)	708, 2348
BstZ17I	GTATAC	1 cut(s)	2067
Bsu15I	ATCGAT	1 cut(s)	517
Bsu36I	CCTNAGG	1 cut(s)	2250
BsuRI	GGCC	5 cut(s)	463, 507, 1401, 1697, 1769
BsuTUI	ATCGAT	1 cut(s)	517
BtgI	CCRYGG	1 cut(s)	1478
BtsIMutI	CAGTG	3 cut(s)	464, 1893, 2058
Cac8I	GCNNGC	1 cut(s)	2428
CciI	TCATGA	1 cut(s)	610
Cfr13I	GGNCC	8 cut(s)	882, 1114, 1400, 1599, 1696, 1767, 1867, 2151
Cfr9I	CCCGGG	1 cut(s)	1088
ClaI	ATCGAT	1 cut(s)	517
Csp6I	GTAC	5 cut(s)	1578, 1791, 1863, 1969, 2397
CviQI	GTAC	5 cut(s)	1578, 1791, 1863, 1969, 2397
DdeI	CTNAG	9 cut(s)	705, 859, 1290, 1454, 2100, 2194, 2250, 2301, 2390
DraIII	CACNNNGTG	3 cut(s)	137, 1457, 1586
EaeI	YGGCCR	1 cut(s)	461
Eam1104I	CTCTTC	1 cut(s)	1403
EarI	CTCTTC	1 cut(s)	1403
EciI	GGCGGA	2 cut(s)	965, 986
Eco105I	TACGTA	1 cut(s)	16
Eco130I	CCWWGG	1 cut(s)	1478
Eco31I	GGTCTC	2 cut(s)	337, 1207
Eco47I	GGWCC	5 cut(s)	882, 1114, 1599, 1867, 2151
Eco57I	CTGAAG	3 cut(s)	153, 1097, 2400
Eco81I	CCTNAGG	1 cut(s)	2250
Eco88I	CYCGRG	1 cut(s)	1088
EcoNI	CCTNNNNNAGG	3 cut(s)	643, 1134, 1939
EcoO109I	RGGNCCY	1 cut(s)	2151
EcoRII	CCWGG	4 cut(s)	366, 1216, 2140, 2157
EcoT14I	CCWWGG	1 cut(s)	1478
ErhI	CCWWGG	1 cut(s)	1478
Esp3I	CGTCTC	1 cut(s)	64
FalI	AAGNNNNNCTT	4 cut(s)	726, 758, 1149, 1181
FaqI	GGGAC	3 cut(s)	349, 1585, 1807
FauI	CCCGC	1 cut(s)	1610
FauNDI	CATATG	1 cut(s)	918
FbaI	TGATCA	3 cut(s)	124, 148, 496
FblI	GTMKAC	3 cut(s)	1357, 2066, 2075
Fnu4HI	GCNGC	4 cut(s)	632, 1082, 1186, 1956
Fsp4HI	GCNGC	4 cut(s)	632, 1082, 1186, 1956
FspBI	CTAG	5 cut(s)	345, 1058, 1134, 1764, 2448
GluI	GCNGC	4 cut(s)	632, 1082, 1186, 1956
GsaI	CCCAGC	1 cut(s)	1663
HaeIII	GGCC	5 cut(s)	463, 507, 1401, 1697, 1769
HapII	CCGG	3 cut(s)	98, 1089, 1189
HindIII	AAGCTT	1 cut(s)	531
HinfI	GANTC	7 cut(s)	607, 774, 932, 1120, 1532, 1683, 2072
HpaII	CCGG	3 cut(s)	98, 1089, 1189
HphI	GGTGA	3 cut(s)	97, 949, 2351
Hpy166II	GTNNAC	4 cut(s)	1358, 1580, 2067, 2076
Hpy188III	TCNNGA	9 cut(s)	604, 611, 895, 1117, 1975, 1994, 2129, 2218, 2252
Hpy8I	GTNNAC	4 cut(s)	1358, 1580, 2067, 2076
HpyAV	CCTTC	6 cut(s)	322, 692, 873, 1828, 2215, 2424
HpyCH4III	ACNGT	6 cut(s)	75, 468, 727, 1795, 1882, 2434
HpyCH4IV	ACGT	3 cut(s)	15, 133, 2271
HpyF10VI	GCNNNNNNNGC	3 cut(s)	460, 1081, 1621
HpyF3I	CTNAG	9 cut(s)	705, 859, 1290, 1454, 2100, 2194, 2250, 2301, 2390
HpySE526I	ACGT	3 cut(s)	15, 133, 2271
Ksp22I	TGATCA	3 cut(s)	124, 148, 496
LguI	GCTCTTC	1 cut(s)	1403
LmnI	GCTCC	3 cut(s)	100, 973, 1460
Lsp1109I	GCAGC	3 cut(s)	618, 1093, 1172
LweI	GCATC	7 cut(s)	44, 250, 1093, 1646, 1720, 2046, 2122
MaeI	CTAG	5 cut(s)	345, 1058, 1134, 1764, 2448
MaeII	ACGT	3 cut(s)	15, 133, 2271
MaeIII	GTNAC	4 cut(s)	854, 1303, 1722, 1891
MboII	GAAGA	8 cut(s)	308, 605, 746, 1169, 1420, 1665, 2079, 2293
MfeI	CAATTG	3 cut(s)	162, 1812, 2060
MflI	RGATCY	2 cut(s)	708, 2348
MhlI	GDGCHC	3 cut(s)	1759, 2271, 2331
MlsI	TGGCCA	1 cut(s)	463
MluNI	TGGCCA	1 cut(s)	463
MlyI	GAGTC	2 cut(s)	941, 2081
MmeI	TCCRAC	5 cut(s)	218, 230, 800, 1758, 2416
Mox20I	TGGCCA	1 cut(s)	463
MroXI	GAANNNNTTC	1 cut(s)	2285
MscI	TGGCCA	1 cut(s)	463
MslI	CAYNNNNRTG	2 cut(s)	1418, 1523
Msp20I	TGGCCA	1 cut(s)	463
MspA1I	CMGCKG	2 cut(s)	494, 1310
MspCI	CTTAAG	3 cut(s)	278, 743, 1915
MspI	CCGG	3 cut(s)	98, 1089, 1189
MspR9I	CCNGG	7 cut(s)	99, 368, 1089, 1090, 1218, 2142, 2159
MunI	CAATTG	3 cut(s)	162, 1812, 2060
MvaI	CCWGG	4 cut(s)	368, 1218, 2142, 2159
MwoI	GCNNNNNNNGC	3 cut(s)	460, 1081, 1621
NciI	CCSGG	3 cut(s)	99, 1089, 1090
NcoI	CCATGG	1 cut(s)	1478
NdeI	CATATG	1 cut(s)	918
NlaIV	GGNNCC	3 cut(s)	1601, 1869, 2152
NmuCI	GTSAC	3 cut(s)	1303, 1722, 1891
NspI	RCATGY	6 cut(s)	481, 1417, 1624, 2318, 2365, 2497
PagI	TCATGA	1 cut(s)	610
PciI	ACATGT	2 cut(s)	477, 2361
PciSI	GCTCTTC	1 cut(s)	1403
PdmI	GAANNNNTTC	1 cut(s)	2285
PfeI	GAWTC	5 cut(s)	607, 774, 1120, 1532, 1683
PflMI	CCANNNNNTGG	2 cut(s)	625, 2147
PkrI	GCNGC	4 cut(s)	633, 1083, 1187, 1957
PleI	GAGTC	2 cut(s)	940, 2080
PpsI	GAGTC	2 cut(s)	940, 2080
Ppu21I	YACGTR	3 cut(s)	16, 134, 2272
PpuMI	RGGWCCY	1 cut(s)	2151
PscI	ACATGT	2 cut(s)	477, 2361
PshBI	ATTAAT	2 cut(s)	1044, 1260
PsiI	TTATAA	1 cut(s)	581
Psp5II	RGGWCCY	1 cut(s)	2151
Psp6I	CCWGG	4 cut(s)	366, 1216, 2140, 2157
PspFI	CCCAGC	1 cut(s)	1659
PspGI	CCWGG	4 cut(s)	366, 1216, 2140, 2157
PspN4I	GGNNCC	3 cut(s)	1601, 1869, 2152
PspPI	GGNCC	8 cut(s)	882, 1114, 1400, 1599, 1696, 1767, 1867, 2151
PspPPI	RGGWCCY	1 cut(s)	2151
PsuI	RGATCY	2 cut(s)	708, 2348
PvuII	CAGCTG	2 cut(s)	494, 1310
RsaI	GTAC	5 cut(s)	1579, 1792, 1864, 1970, 2398
RsaNI	GTAC	5 cut(s)	1578, 1791, 1863, 1969, 2397
RseI	CAYNNNNRTG	2 cut(s)	1418, 1523
SapI	GCTCTTC	1 cut(s)	1403
SatI	GCNGC	4 cut(s)	632, 1082, 1186, 1956
Sau96I	GGNCC	8 cut(s)	882, 1114, 1400, 1599, 1696, 1767, 1867, 2151
ScaI	AGTACT	1 cut(s)	2398
SchI	GAGTC	2 cut(s)	941, 2081
ScrFI	CCNGG	7 cut(s)	99, 368, 1089, 1090, 1218, 2142, 2159
SduI	GDGCHC	3 cut(s)	1759, 2271, 2331
SfaNI	GCATC	7 cut(s)	44, 250, 1093, 1646, 1720, 2046, 2122
SfcI	CTRYAG	2 cut(s)	712, 1354
SinI	GGWCC	5 cut(s)	882, 1114, 1599, 1867, 2151
SmaI	CCCGGG	1 cut(s)	1090
SmiMI	CAYNNNNRTG	2 cut(s)	1418, 1523
SmlI	CTYRAG	4 cut(s)	278, 743, 1915, 1975
SmoI	CTYRAG	4 cut(s)	278, 743, 1915, 1975
SnaBI	TACGTA	1 cut(s)	16
SsiI	CCGC	4 cut(s)	950, 971, 1603, 1955
SspMI	CTAG	5 cut(s)	345, 1058, 1134, 1764, 2448
StyD4I	CCNGG	7 cut(s)	97, 366, 1087, 1088, 1216, 2140, 2157
StyI	CCWWGG	1 cut(s)	1478
TaaI	ACNGT	6 cut(s)	75, 468, 727, 1795, 1882, 2434
TaiI	ACGT	3 cut(s)	18, 136, 2274
TaqI	TCGA	3 cut(s)	5, 517, 1395
TatI	WGTACW	2 cut(s)	1577, 2396
TauI	GCSGC	1 cut(s)	1958
TfiI	GAWTC	5 cut(s)	607, 774, 1120, 1532, 1683
TscAI	CASTG	3 cut(s)	471, 1900, 2058
TseFI	GTSAC	3 cut(s)	1303, 1722, 1891
TseI	GCWGC	3 cut(s)	631, 1081, 1185
Tsp45I	GTSAC	3 cut(s)	1303, 1722, 1891
TspGWI	ACGGA	4 cut(s)	1326, 1457, 1880, 2495
TspMI	CCCGGG	1 cut(s)	1088
TspRI	CASTG	3 cut(s)	471, 1900, 2058
Van91I	CCANNNNNTGG	2 cut(s)	625, 2147
Vha464I	CTTAAG	3 cut(s)	278, 743, 1915
VpaK11BI	GGWCC	5 cut(s)	882, 1114, 1599, 1867, 2151
VspI	ATTAAT	2 cut(s)	1044, 1260
XagI	CCTNNNNNAGG	3 cut(s)	643, 1134, 1939
XapI	RAATTY	6 cut(s)	383, 428, 869, 986, 1390, 1430
XceI	RCATGY	6 cut(s)	481, 1417, 1624, 2318, 2365, 2497
XmaI	CCCGGG	1 cut(s)	1088
XmiI	GTMKAC	3 cut(s)	1357, 2066, 2075
XmnI	GAANNNNTTC	1 cut(s)	2285
XspI	CTAG	5 cut(s)	345, 1058, 1134, 1764, 2448
ZrmI	AGTACT	1 cut(s)	2398

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.