Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0002700

Physical Location & Seq

Genomic Coordinates Reverse (-)

86549903 .. 86554435

Gene Structure 4533 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00064760.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGTTGGGTTTGGAGTATCAATCAAAAAGAGGTTATATTGGGTTGGATTATTATGGAAGGACAGTCGGGATAAAGATCATGCCTGTTGGGATTCACATGGGGCAGATTCACTCAGTGTTAAAACTTGCAGATAAGGAGTGGAGGGTAGGAGAACTAAAACAAAAGTTTGAAGGAAAGACTGTGTTGCTTGGTGTTGATGATATGGACATCTTTAAAGGTGTCAATTTGAAGCTCTTGGCAATGGAACAGATGCTGAAGCAGCACCCTAAGTGGCAGGGGAGAGCAGTTTTGGTACAGATAGCAAATCCAGCTAGGGGCAGAGGGAAAGATCTTGAGGAAACACAGGCTGAAATCTATGCAAGCGTCAAGAGGATAAATGAAAAATATGGTCAGAATGGATATGAACCCATTGTTTTCATTGATAAACCAGTCTCTCTTAGTGAAAGAGTTGCGTATTACACAGTAGCCGAGTGTGTGGTGGTCACTGCTGTGAGGGATGGGATGAATCTTATTCCATATGAGTACATTGTATGCAGGCAAGGGAACTCTGCATCAGAATCTGAATCAGAATCCAGTGGTCCCAAGAAGAGCATGCTGGTTGTATCAGAGTTCATTGGATGTTCACCTTCACTTAGTGGTGCAATTCGGGTTAACCCATGGAATGTTGAATCAACAGCTGAGGCCATGAATGAGGCAATTTCAATGATTGAACCGGAGAAACAGTTGAGACATGAGAAGCATTATAGGTATGTTAGTACACATGATGTGGCTTACTGGTCACGAAGTGTTTTCCAGGACATGGAGAGGACGTGCAAAGACCATTTCAGAAGACGTTGCTGGGGAATTGGTCTGGGTTTTGGCTTCAGGGTTATAGCACTGGATCCTAACTTCAGAAAACTGTCTATTGATGCCATTGTGAATGCCTATGTGAAATCTAAGAGGAGGGCTATATTGTTAGATTATGATGGCACTGTGATGCCTCAAACATCTATAAATAAGACCCCAAGTCAAGAGGTCATCTCCCTAATCAATACACTTTGTGGTGATGTTAAAAACACTGTTTTTGTGGTCAGTGGAAGAGGAAGGGATAGTTTGACCAAGTGGTTTTCTCCTTGCAAGAAACTTGGAATTGCTGCTGAACACGGTTATTTTGTAAGGTGGTCTGCCGACAAGGATTGGGAAATTTGTGGACAGAGTAGTGATTTTGCGTGGATACAGATAGCTGAGCCAGTTATGAAATTGTATACAGAAGCCACTGATGGATCTTCTATTGAAACCAAGGAGAGTGCATTGGTTTGGCACCATCGAGATGCCGACCCGGGTTTTGGATCCAGCCAGGCTAAAGAATTGTTGGACCATCTAGAAAGTGTGTTGGCAAACGAACCAGTAGCTGCCAAGAGTGGTCAATATATTGTAGAAGTAAAGCCACAGGGTGTCAGTAAAGGCCTGGTCGCTGAAAAGGTATTCACATCGATGCACGAGAGTGGGAAGCAGGCAGATTTTGTTTTGTGCATTGGTGATGATAGATCTGATGAGGACATGTTTGAGATTATCGGCAATGCGCTCAATAATGGTGTCATCTCCTCAAATACGAGTGTTTTTGCATGCACCGTTGGACAGAAACCTAGTAAAGCCAAGTACTATTTGGATGACCCTACTGATGTCATAATGATGCTTGAAGCTCTTGCAGACGCTTCAGATTCTCCGCCTTCCTCAGACGGCGAAGCAGGAAGCCCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005984 GO:0005991 GO:0005992 GO:0006793 GO:0006796 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009311 GO:0009312 GO:0009987 GO:0016051 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0033554 GO:0034637 GO:0042578 GO:0044237 GO:0044238 GO:0044249 GO:0044262 GO:0044424 GO:0044444 GO:0044464 GO:0046351 GO:0050896 GO:0051716 GO:0070413 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glyco_transf_20 Trehalose_PPase

Protein Analysis

579

Amino Acids

64.31

Weight (kDa)

5.84

Isoelectric Point (pI)

37.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_20	PF00982	1 - 268	8e-91	Glycosyltransferase family 20
Trehalose_PPase	PF02358	318 - 552	2.7e-81	Trehalose-phosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002700)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06410 AT1G06410 AT1G06410
fragaria_vesca	FvH4_3g07260 FvH4_6g27760 FvH4_6g27760
malus_domestica	MD00G1008700.v1.1 MD09G1234800.v1.1 MD10G1275100.v1.1
prunus_persica	Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.4G067300_v2.0.a1
pyrus_communis	pycom05g27390 pycom09g15300 pycom10g22970
rosa_chinensis	RchiOBHm_Chr2g0131021 RchiOBHm_Chr5g0011801
rosa_laevigata	RLG00000019161 RLG00000031862
rosa_multiflora	Rmu_sc0003629.1_g000054 Rmu_ssc0000357.1_g000005
rosa_roxburghii	Rroxscaffold_1G00064760
rosa_rugosa	Rorug02G0294400 Rorug04G0459400
rosa_samantha	Rh2AG346700 Rh2BG354100 Rh2CG332700 Rh2DG372200 Rh5AG090700 Rh5BG086300 Rh5CG100100 Rh5DG086400
rosa_wichuraiana	Rw0G018970 Rw2G028110 Rw2G028150 Rw5G007920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1299
AccB7I	CCANNNNNTGG	1 cut(s)	799
AccI	GTMKAC	1 cut(s)	1244
AciI	CCGC	1 cut(s)	1706
AclWI	GGATC	5 cut(s)	875, 888, 1270, 1323, 1336
AcsI	RAATTY	1 cut(s)	1182
AcuI	CTGAAG	4 cut(s)	275, 847, 874, 1680
AdeI	CACNNNGTG	5 cut(s)	115, 635, 785, 1040, 1433
AfaI	GTAC	4 cut(s)	294, 524, 757, 1640
AfiI	CCNNNNNNNGG	3 cut(s)	314, 799, 1325
AflIII	ACRYGT	1 cut(s)	1539
AgsI	TTSAA	7 cut(s)	170, 229, 668, 702, 710, 1274, 1679
AhdI	GACNNNNNGTC	1 cut(s)	1005
AjiI	CACGTC	1 cut(s)	810
AjnI	CCWGG	3 cut(s)	792, 1335, 1446
AleI	CACNNNNGTG	2 cut(s)	488, 1482
AluBI	AGCT	6 cut(s)	232, 311, 677, 1223, 1391, 1682
AluI	AGCT	6 cut(s)	232, 311, 677, 1223, 1391, 1682
Alw26I	GTCTC	2 cut(s)	436, 721
AlwI	GGATC	5 cut(s)	875, 888, 1270, 1323, 1336
AlwNI	CAGNNNCTG	3 cut(s)	253, 560, 1391
Ama87I	CYCGRG	1 cut(s)	1318
AoxI	GGCC	2 cut(s)	681, 1444
ApeKI	GCWGC	3 cut(s)	259, 1133, 1391
ApoI	RAATTY	1 cut(s)	1182
ArsI	GACNNNNNNTTYG	2 cut(s)	1307, 1339
AspLEI	GCGC	1 cut(s)	1564
AspS9I	GGNCC	2 cut(s)	578, 1354
AsuC2I	CCSGG	2 cut(s)	1319, 1320
AsuHPI	GGTGA	3 cut(s)	615, 1055, 1529
AvaI	CYCGRG	1 cut(s)	1318
AvaII	GGWCC	2 cut(s)	578, 1354
BamHI	GGATCC	2 cut(s)	880, 1328
BanI	GGYRCC	1 cut(s)	1299
BauI	CACGAG	1 cut(s)	1478
BbsI	GAAGAC	1 cut(s)	835
BbvCI	CCTCAGC	1 cut(s)	678
BbvI	GCAGC	3 cut(s)	271, 1120, 1378
BccI	CCATC	5 cut(s)	491, 959, 1253, 1311, 1365
BceAI	ACGGC	1 cut(s)	1735
BciT130I	CCWGG	3 cut(s)	794, 1337, 1448
BciVI	GTATCC	1 cut(s)	1206
BcnI	CCSGG	2 cut(s)	1319, 1320
BcoDI	GTCTC	2 cut(s)	436, 721
BfaI	CTAG	3 cut(s)	312, 1361, 1626
BfuI	GTATCC	1 cut(s)	1206
BglII	AGATCT	2 cut(s)	328, 1526
BisI	GCNGC	3 cut(s)	260, 1134, 1392
BlpI	GCTNAGC	1 cut(s)	1224
BlsI	GCNGC	3 cut(s)	261, 1135, 1393
BmcAI	AGTACT	1 cut(s)	1640
Bme1390I	CCNGG	5 cut(s)	794, 1319, 1320, 1337, 1448
Bme18I	GGWCC	2 cut(s)	578, 1354
BmeRI	GACNNNNNGTC	1 cut(s)	1005
BmeT110I	CYCGRG	1 cut(s)	1318
BmgBI	CACGTC	1 cut(s)	810
BmgT120I	GGNCC	2 cut(s)	578, 1354
BmiI	GGNNCC	4 cut(s)	580, 882, 1301, 1330
BmrFI	CCNGG	5 cut(s)	794, 1319, 1320, 1337, 1448
BmsI	GCATC	7 cut(s)	240, 560, 898, 966, 1300, 1464, 1662
BpiI	GAAGAC	1 cut(s)	835
BplI	GAGNNNNNCTC	2 cut(s)	1004, 1036
Bpu10I	CCTNAGC	1 cut(s)	678
Bpu1102I	GCTNAGC	1 cut(s)	1224
BpuEI	CTTGAG	1 cut(s)	353
BpuMI	CCSGG	2 cut(s)	1319, 1320
Bsa29I	ATCGAT	1 cut(s)	1472
BsaBI	GATNNNNATC	1 cut(s)	74
BsaJI	CCNNGG	3 cut(s)	656, 1278, 1318
BsaWI	WCCGGW	1 cut(s)	712
BsaXI	ACNNNNNCTCC	4 cut(s)	707, 737, 794, 824
Bsc4I	CCNNNNNNNGG	3 cut(s)	314, 799, 1325
Bse1I	ACTGG	6 cut(s)	428, 573, 779, 882, 1229, 1385
Bse3DI	GCAATG	2 cut(s)	246, 1564
Bse8I	GATNNNNATC	1 cut(s)	74
BseBI	CCWGG	3 cut(s)	794, 1337, 1448
BseCI	ATCGAT	1 cut(s)	1472
BseDI	CCNNGG	3 cut(s)	656, 1278, 1318
BseGI	GGATG	4 cut(s)	502, 507, 623, 1654
BseJI	GATNNNNATC	1 cut(s)	74
BseLI	CCNNNNNNNGG	3 cut(s)	314, 799, 1325
BseMI	GCAATG	2 cut(s)	246, 1564
BseMII	CTCAG	4 cut(s)	126, 669, 1215, 1728
BseNI	ACTGG	6 cut(s)	428, 573, 779, 882, 1229, 1385
BseRI	GAGGAG	2 cut(s)	955, 1573
BseXI	GCAGC	3 cut(s)	271, 1120, 1378
BseYI	CCCAGC	1 cut(s)	837
BshFI	GGCC	2 cut(s)	683, 1446
BshNI	GGYRCC	1 cut(s)	1299
BshVI	ATCGAT	1 cut(s)	1472
BsiHKCI	CYCGRG	1 cut(s)	1318
BsiSI	CCGG	2 cut(s)	713, 1319
BslFI	GGGAC	1 cut(s)	564
BslI	CCNNNNNNNGG	3 cut(s)	314, 799, 1325
BsmAI	GTCTC	2 cut(s)	436, 721
BsmFI	GGGAC	1 cut(s)	564
BsmI	GAATGC	1 cut(s)	925
BsnI	GGCC	2 cut(s)	683, 1446
BsoBI	CYCGRG	1 cut(s)	1318
Bsp143I	GATC	6 cut(s)	75, 328, 880, 1262, 1328, 1526
Bsp1720I	GCTNAGC	1 cut(s)	1224
Bsp19I	CCATGG	1 cut(s)	656
BspACI	CCGC	1 cut(s)	1706
BspANI	GGCC	2 cut(s)	683, 1446
BspCNI	CTCAG	4 cut(s)	125, 670, 1216, 1727
BspDI	ATCGAT	1 cut(s)	1472
BspLI	GGNNCC	4 cut(s)	580, 882, 1301, 1330
BspPI	GGATC	5 cut(s)	875, 888, 1270, 1323, 1336
BspQI	GCTCTTC	1 cut(s)	581
BspT107I	GGYRCC	1 cut(s)	1299
BsrDI	GCAATG	2 cut(s)	246, 1564
BsrI	ACTGG	6 cut(s)	428, 573, 779, 882, 1229, 1385
BssECI	CCNNGG	3 cut(s)	656, 1278, 1318
BssMI	GATC	6 cut(s)	75, 328, 880, 1262, 1328, 1526
BssNAI	GTATAC	1 cut(s)	1245
BssSI	CACGAG	1 cut(s)	1478
BssT1I	CCWWGG	2 cut(s)	656, 1278
Bst1107I	GTATAC	1 cut(s)	1245
Bst2BI	CACGAG	1 cut(s)	1478
Bst2UI	CCWGG	3 cut(s)	794, 1337, 1448
Bst4CI	ACNGT	9 cut(s)	64, 181, 463, 723, 900, 973, 1060, 1145, 1612
Bst6I	CTCTTC	2 cut(s)	581, 1072
BstC8I	GCNNGC	5 cut(s)	361, 536, 593, 1494, 1606
BstDEI	CTNAG	8 cut(s)	112, 267, 437, 632, 678, 936, 1224, 1714
BstDSI	CCRYGG	1 cut(s)	656
BstF5I	GGATG	4 cut(s)	502, 507, 623, 1654
BstHHI	GCGC	1 cut(s)	1564
BstKTI	GATC	6 cut(s)	78, 331, 883, 1265, 1331, 1529
BstMAI	GTCTC	2 cut(s)	436, 721
BstMBI	GATC	6 cut(s)	75, 328, 880, 1262, 1328, 1526
BstMWI	GCNNNNNNNGC	2 cut(s)	259, 308
BstNI	CCWGG	3 cut(s)	794, 1337, 1448
BstNSI	RCATGY	3 cut(s)	595, 1543, 1608
BstSCI	CCNGG	5 cut(s)	792, 1317, 1318, 1335, 1446
BstV1I	GCAGC	3 cut(s)	271, 1120, 1378
BstV2I	GAAGAC	1 cut(s)	835
BstX2I	RGATCY	5 cut(s)	328, 880, 1262, 1328, 1526
BstYI	RGATCY	5 cut(s)	328, 880, 1262, 1328, 1526
BstZ17I	GTATAC	1 cut(s)	1245
Bsu15I	ATCGAT	1 cut(s)	1472
BsuI	GTATCC	1 cut(s)	1206
BsuRI	GGCC	2 cut(s)	683, 1446
BsuTUI	ATCGAT	1 cut(s)	1472
BtgI	CCRYGG	1 cut(s)	656
BtrI	CACGTC	1 cut(s)	810
BtsCI	GGATG	4 cut(s)	502, 507, 623, 1654
BtsI	GCAGTG	1 cut(s)	483
BtsIMutI	CAGTG	8 cut(s)	120, 483, 580, 875, 969, 1056, 1078, 1254
Cac8I	GCNNGC	5 cut(s)	361, 536, 593, 1494, 1606
CaiI	CAGNNNCTG	3 cut(s)	253, 560, 1391
CfoI	GCGC	1 cut(s)	1564
Cfr13I	GGNCC	2 cut(s)	578, 1354
Cfr9I	CCCGGG	1 cut(s)	1318
ClaI	ATCGAT	1 cut(s)	1472
CseI	GACGC	2 cut(s)	352, 1700
Csp6I	GTAC	4 cut(s)	293, 523, 756, 1639
CviQI	GTAC	4 cut(s)	293, 523, 756, 1639
DdeI	CTNAG	8 cut(s)	112, 267, 437, 632, 678, 936, 1224, 1714
DpnI	GATC	6 cut(s)	77, 330, 882, 1264, 1330, 1528
DpnII	GATC	6 cut(s)	75, 328, 880, 1262, 1328, 1526
DraI	TTTAAA	1 cut(s)	214
DraIII	CACNNNGTG	5 cut(s)	115, 635, 785, 1040, 1433
DriI	GACNNNNNGTC	1 cut(s)	1005
Eam1104I	CTCTTC	2 cut(s)	581, 1072
Eam1105I	GACNNNNNGTC	1 cut(s)	1005
EarI	CTCTTC	2 cut(s)	581, 1072
EciI	GGCGGA	1 cut(s)	1695
Eco130I	CCWWGG	2 cut(s)	656, 1278
Eco147I	AGGCCT	1 cut(s)	1446
Eco47I	GGWCC	2 cut(s)	578, 1354
Eco57I	CTGAAG	4 cut(s)	275, 847, 874, 1680
Eco88I	CYCGRG	1 cut(s)	1318
EcoRII	CCWGG	3 cut(s)	792, 1335, 1446
EcoT14I	CCWWGG	2 cut(s)	656, 1278
ErhI	CCWWGG	2 cut(s)	656, 1278
FaqI	GGGAC	1 cut(s)	564
FauNDI	CATATG	1 cut(s)	517
FblI	GTMKAC	1 cut(s)	1244
Fnu4HI	GCNGC	3 cut(s)	260, 1134, 1392
FokI	GGATG	4 cut(s)	509, 514, 630, 1661
Fsp4HI	GCNGC	3 cut(s)	260, 1134, 1392
FspBI	CTAG	3 cut(s)	312, 1361, 1626
GlaI	GCGC	1 cut(s)	1563
GluI	GCNGC	3 cut(s)	260, 1134, 1392
GsaI	CCCAGC	1 cut(s)	841
HaeIII	GGCC	2 cut(s)	683, 1446
HapII	CCGG	2 cut(s)	713, 1319
HgaI	GACGC	2 cut(s)	352, 1700
HhaI	GCGC	1 cut(s)	1564
Hin6I	GCGC	1 cut(s)	1562
HinP1I	GCGC	1 cut(s)	1562
HincII	GTYRAC	1 cut(s)	652
HindII	GTYRAC	1 cut(s)	652
HinfI	GANTC	8 cut(s)	91, 106, 505, 557, 563, 569, 668, 1700
HpaI	GTTAAC	1 cut(s)	652
HpaII	CCGG	2 cut(s)	713, 1319
HphI	GGTGA	3 cut(s)	615, 1055, 1529
Hpy166II	GTNNAC	5 cut(s)	623, 652, 758, 1190, 1245
Hpy188III	TCNNGA	7 cut(s)	67, 332, 367, 780, 1010, 1307, 1361
Hpy8I	GTNNAC	5 cut(s)	623, 652, 758, 1190, 1245
HpyAV	CCTTC	5 cut(s)	51, 164, 636, 1077, 1719
HpyCH4III	ACNGT	9 cut(s)	64, 181, 463, 723, 900, 973, 1060, 1145, 1612
HpyCH4IV	ACGT	2 cut(s)	809, 832
HpyF10VI	GCNNNNNNNGC	2 cut(s)	259, 308
HpyF3I	CTNAG	8 cut(s)	112, 267, 437, 632, 678, 936, 1224, 1714
HpySE526I	ACGT	2 cut(s)	809, 832
HspAI	GCGC	1 cut(s)	1562
KspAI	GTTAAC	1 cut(s)	652
Kzo9I	GATC	6 cut(s)	75, 328, 880, 1262, 1328, 1526
LguI	GCTCTTC	1 cut(s)	581
Lsp1109I	GCAGC	3 cut(s)	271, 1120, 1378
LweI	GCATC	7 cut(s)	240, 560, 898, 966, 1300, 1464, 1662
MaeI	CTAG	3 cut(s)	312, 1361, 1626
MaeII	ACGT	2 cut(s)	809, 832
MaeIII	GTNAC	2 cut(s)	481, 777
MalI	GATC	6 cut(s)	77, 330, 882, 1264, 1330, 1528
MboI	GATC	6 cut(s)	75, 328, 880, 1262, 1328, 1526
MboII	GAAGA	4 cut(s)	598, 840, 1089, 1257
MflI	RGATCY	5 cut(s)	328, 880, 1262, 1328, 1526
MluCI	AATT	8 cut(s)	223, 642, 696, 843, 1128, 1182, 1238, 1346
MmeI	TCCRAC	3 cut(s)	24, 1332, 1594
MseI	TTAA	4 cut(s)	119, 213, 651, 1050
MslI	CAYNNNNRTG	6 cut(s)	488, 974, 1308, 1472, 1482, 1670
MspA1I	CMGCKG	1 cut(s)	677
MspI	CCGG	2 cut(s)	713, 1319
MspR9I	CCNGG	5 cut(s)	794, 1319, 1320, 1337, 1448
Mva1269I	GAATGC	1 cut(s)	925
MvaI	CCWGG	3 cut(s)	794, 1337, 1448
MwoI	GCNNNNNNNGC	2 cut(s)	259, 308
NciI	CCSGG	2 cut(s)	1319, 1320
NcoI	CCATGG	1 cut(s)	656
NdeI	CATATG	1 cut(s)	517
NdeII	GATC	6 cut(s)	75, 328, 880, 1262, 1328, 1526
NlaIV	GGNNCC	4 cut(s)	580, 882, 1301, 1330
NmeAIII	GCCGAG	1 cut(s)	493
NmuCI	GTSAC	2 cut(s)	481, 777
NspI	RCATGY	3 cut(s)	595, 1543, 1608
OliI	CACNNNNGTG	2 cut(s)	488, 1482
PaeI	GCATGC	2 cut(s)	595, 1608
PceI	AGGCCT	1 cut(s)	1446
PciI	ACATGT	1 cut(s)	1539
PciSI	GCTCTTC	1 cut(s)	581
PctI	GAATGC	1 cut(s)	925
PfeI	GAWTC	8 cut(s)	91, 106, 505, 557, 563, 569, 668, 1700
PflMI	CCANNNNNTGG	1 cut(s)	799
PfoI	TCCNGGA	1 cut(s)	792
PkrI	GCNGC	3 cut(s)	261, 1135, 1393
PscI	ACATGT	1 cut(s)	1539
Psp6I	CCWGG	3 cut(s)	792, 1335, 1446
PspFI	CCCAGC	1 cut(s)	837
PspGI	CCWGG	3 cut(s)	792, 1335, 1446
PspN4I	GGNNCC	4 cut(s)	580, 882, 1301, 1330
PspPI	GGNCC	2 cut(s)	578, 1354
PstNI	CAGNNNCTG	3 cut(s)	253, 560, 1391
PsuI	RGATCY	5 cut(s)	328, 880, 1262, 1328, 1526
PvuII	CAGCTG	1 cut(s)	677
RsaI	GTAC	4 cut(s)	294, 524, 757, 1640
RsaNI	GTAC	4 cut(s)	293, 523, 756, 1639
RseI	CAYNNNNRTG	6 cut(s)	488, 974, 1308, 1472, 1482, 1670
SapI	GCTCTTC	1 cut(s)	581
SaqAI	TTAA	4 cut(s)	119, 213, 651, 1050
SatI	GCNGC	3 cut(s)	260, 1134, 1392
Sau3AI	GATC	6 cut(s)	75, 328, 880, 1262, 1328, 1526
Sau96I	GGNCC	2 cut(s)	578, 1354
ScaI	AGTACT	1 cut(s)	1640
ScrFI	CCNGG	5 cut(s)	794, 1319, 1320, 1337, 1448
SfaNI	GCATC	7 cut(s)	240, 560, 898, 966, 1300, 1464, 1662
SinI	GGWCC	2 cut(s)	578, 1354
SmaI	CCCGGG	1 cut(s)	1320
SmiMI	CAYNNNNRTG	6 cut(s)	488, 974, 1308, 1472, 1482, 1670
SmlI	CTYRAG	1 cut(s)	332
SmoI	CTYRAG	1 cut(s)	332
SphI	GCATGC	2 cut(s)	595, 1608
Sse9I	AATT	8 cut(s)	223, 642, 696, 843, 1128, 1182, 1238, 1346
SseBI	AGGCCT	1 cut(s)	1446
SsiI	CCGC	1 cut(s)	1706
SspMI	CTAG	3 cut(s)	312, 1361, 1626
StuI	AGGCCT	1 cut(s)	1446
StyD4I	CCNGG	5 cut(s)	792, 1317, 1318, 1335, 1446
StyI	CCWWGG	2 cut(s)	656, 1278
TaaI	ACNGT	9 cut(s)	64, 181, 463, 723, 900, 973, 1060, 1145, 1612
TaiI	ACGT	2 cut(s)	812, 835
TaqI	TCGA	2 cut(s)	1306, 1472
TasI	AATT	8 cut(s)	223, 642, 696, 843, 1128, 1182, 1238, 1346
TatI	WGTACW	3 cut(s)	522, 755, 1638
TfiI	GAWTC	8 cut(s)	91, 106, 505, 557, 563, 569, 668, 1700
Tru1I	TTAA	4 cut(s)	119, 213, 651, 1050
Tru9I	TTAA	4 cut(s)	119, 213, 651, 1050
TscAI	CASTG	8 cut(s)	120, 490, 580, 882, 976, 1063, 1078, 1261
TseFI	GTSAC	2 cut(s)	481, 777
TseI	GCWGC	3 cut(s)	259, 1133, 1391
Tsp45I	GTSAC	2 cut(s)	481, 777
TspDTI	ATGAA	7 cut(s)	393, 406, 417, 518, 601, 701, 1250
TspMI	CCCGGG	1 cut(s)	1318
TspRI	CASTG	8 cut(s)	120, 490, 580, 882, 976, 1063, 1078, 1261
Van91I	CCANNNNNTGG	1 cut(s)	799
VpaK11BI	GGWCC	2 cut(s)	578, 1354
XapI	RAATTY	1 cut(s)	1182
XbaI	TCTAGA	1 cut(s)	1360
XceI	RCATGY	3 cut(s)	595, 1543, 1608
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1642
XmaI	CCCGGG	1 cut(s)	1318
XmiI	GTMKAC	1 cut(s)	1244
XspI	CTAG	3 cut(s)	312, 1361, 1626
ZrmI	AGTACT	1 cut(s)	1640

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.