Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0002700

Physical Location & Seq

Genomic Coordinates Forward (+)

48662195 .. 48667191

Gene Structure 4997 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG354100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2715 bp

ATGAGTTCAACCAAGAGGAAGACAACTAGGCTTCATTTCTCATTGCCTTTAATAATACAGAGATTGCCTGATATTTTCATTCTGAAATGGAATAAAGTGTCTCTTGTGAGGTTGTCCAGTTGTAAAAGGCTGAAAAAAAAAAAATCAAAAATGTCAAAGTCGTACATAAATCTTTTAGATTTGGCATCAGGGAACTTCCCTACAATGGAGGGGAGAAGGAAAAGGATGCCAAGGGTGAACACAGCTCCGGGAAATTTGTCAGATCTTGAGGATGATCAAGCACGCAGTGTGTCATCTGATCAACCATCCTCGATATCTTCAGATCGGGTGATTATTGTTGCAAACCAGCTTCCTTTGAAAGCAAAGCGAAGAGGGGATAATACCGGGTGGAATTTCAGTTGGAATGAGGATTCTTTGCTTTTGCAACTTAAGGATGGTCTGCCAGATGACATGGATGTTATTTATGTAGGGTCATTGAGGGTTCATGTTGATCCTGTTGACCAGGAGGATGTATCACATGTCTTACTAGATGAATTCAAGTGTGTTCCAACTTTTCTCCCGCCTGATATTCTGACTAAATTCTATGATGGTTTCTGCAAGAAGCATTTGTGGCCATTGTTTCATTACATGATGCCCTTTTCAGCTGAGCAAGGAGGTCGATTTGATCGGTCTTTGTGGGAAGCATATATTTCAGCTAATAAATTGTTTTTTCAAAGAGTGGTTGAGCTTATAAACCCAGATGAAGATTATATCTGGATTCATGATTACCATTTGATGGTGCTGCCAACCTTCTTGAGGAGGCGTTTTAGTCGGGTTAGGATGGGATTTTTCCTTCACAGCCCATTTCCTTCGTCTGAGATCTATAGAACTCTTCCTGTAAGAGAAGAAATACTTAAAGCGTTACTCAATTCAGATATTATTGGTTTCCACACCTTTGACTATGCTCGTCATTTCCTTACTTGTTGTAGCCGGATGTTGGGCTTGGTATATCAGTCAAGGAGAGGCTACTTAGGATTGGAATATTATGGAAGGACTATTAGGATCAAGATTATGCCAGTTGGAGTTCATATGGGTTGGATAGAGTCGGTGATGCAAATTGCAGATGAAGATTGTACTATGAGAGAGCTTGCACAAAAATTCAAAGGGAAAACAATGTTTCTTGGTGTAGATGATATGGACATTTTTAAAGGTATTAATTTGAAACTTTTAGCAATGGAGCAGATGCTCAAGCAACATCCTAACTGGCAGGGAAAGGCTGTGCTAGTCCAGATTGTAAACCCTGCTAGAGGTAAAGGGATAGATTTAGAGGAAATACGAGAAGAAATACAAGAAAACTGCCGGCAGATAAACGAAGAATTTGGGAAACCGGGCTATGAACCTATAATCATAATTGACAGGCCAGTTTCTATTAGTGAGAGAGTTTCCTATTACAACATTGCTGAGTGTGTTGTTGTGACAGCCGTTAGAGATGGGATGAACCTTACTCCTTACGAATATGTTGTCTGTAGGCAAGGAATATCTGGTTCCAAATCATGTTCAAACTTTGATGGCCCAAAGGAGAGCATGTTAGTGGTGTCAGAGTTTATTGGATGCTCTCCATCTCTTAGTGGGGCAATCCGTGTTAACCCATGGAATGTTGAAGCAACTGCAGAGGGAATGAATGTTGCTATATCAATGGAAGATTCAGAGAAACAATTACGGCACGAGAAGCATTACCGGTATATTAGTACGCACGATGTGGCTTATTGGTCACGCAGTTTCTTGCAAGACATGCAGAGAACTTGTGCAGACCATTTTAAGAGAAGATGTTGGGGAATTGGTTTTGGCTTTGGATTCAGAGTTGTGGCACTTGATCCTAATTTCAAAAAGCTTTCAATTGATGCTATTGTAACGGCTTACAAAGGAGCAAACACTAGAGCCATTATGTTGGATTATGATGGTACTGTAATGCCCCAGCACTCAATTGACAAGTCCCCTAGTCAGAAGGTAATCTCAATTATGAACACACTCTGTGCCGACCAAAAAAATACAGTTTTCATCGTCACTGGTAGAGGGAGGGAGAGCTTAAGCAAGTGGTTTTCTCCATGCCAGAGGCTTGGAATTGCAGCAGAACATGGATACTTCTTGAGATGGTCACAAAATGAGGAATGGGAAATCTGTCAGCAGAGTTTTGGGTTTGGTTGGATGAAAATTGCTGAACCAGTAATGAAATTGTATACTGAGGCTACTGATGGTTCTTCTATAGAAATTAAGGAAAGTGCTATGGTTTGGCAATATCGAGATGCAGACCCAGGGTTCGGGTCCTCCCAGGCAAAGGAGATGTTGGATCATCTAGAAAGTGTCTTGTCAAATGAACCTGTTGCTGTCAAGAAGGGTCAGTTTATTTTAGACGTCAAGCCTCAGGGAGTCAGTAAAGGGCTTGTTGCACAGAAGATTTTCACATCAATGGCTGAGAATGGAAAACATGCAGACTTTGTTCTTTGTATTGGTGATGACAGATCCGATGAGGACATGTTTGAGATATTTGGCCATGCGAAGTTGAAAGACATTCTTTCCCCCAATCCTGCAGTTTTTGCTTGCACAGTTGGACAAAAGCCAAGCAAGGCTACATATTACTTGGACGACACAACTGAAGTGATCACCATGCTTGAATCTCTTGCTGAAGCCTTTGATACTTTGCCACCCACTGACATAGGATATGAGAGCGATCCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005984 GO:0005991 GO:0005992 GO:0006793 GO:0006796 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009311 GO:0009312 GO:0009987 GO:0016051 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0033554 GO:0034637 GO:0042578 GO:0044237 GO:0044238 GO:0044249 GO:0044262 GO:0044424 GO:0044444 GO:0044464 GO:0046351 GO:0050896 GO:0051716 GO:0070413 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glyco_transf_20 Trehalose_PPase

Protein Analysis

904

Amino Acids

103.09

Weight (kDa)

6.62

Isoelectric Point (pI)

46.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_20	PF00982	109 - 592	1e-172	Glycosyltransferase family 20
Trehalose_PPase	PF02358	642 - 876	3.4e-76	Trehalose-phosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002700)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06410 AT1G06410 AT1G06410
fragaria_vesca	FvH4_3g07260 FvH4_6g27760 FvH4_6g27760
malus_domestica	MD00G1008700.v1.1 MD09G1234800.v1.1 MD10G1275100.v1.1
prunus_persica	Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.4G067300_v2.0.a1
pyrus_communis	pycom05g27390 pycom09g15300 pycom10g22970
rosa_chinensis	RchiOBHm_Chr2g0131021 RchiOBHm_Chr5g0011801
rosa_laevigata	RLG00000019161 RLG00000031862
rosa_multiflora	Rmu_sc0003629.1_g000054 Rmu_ssc0000357.1_g000005
rosa_roxburghii	Rroxscaffold_1G00064760
rosa_rugosa	Rorug02G0294400 Rorug04G0459400
rosa_samantha	Rh2AG346700 Rh2BG354100 Rh2CG332700 Rh2DG372200 Rh5AG090700 Rh5BG086300 Rh5CG100100 Rh5DG086400
rosa_wichuraiana	Rw0G018970 Rw2G028110 Rw2G028150 Rw5G007920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	731
AatII	GACGTC	1 cut(s)	2394
AccB7I	CCANNNNNTGG	1 cut(s)	775
AccI	GTMKAC	1 cut(s)	2216
AciI	CCGC	1 cut(s)	560
AclWI	GGATC	6 cut(s)	485, 1049, 1847, 2334, 2493, 2702
AcoI	YGGCCR	2 cut(s)	611, 2527
AcsI	RAATTY	6 cut(s)	253, 391, 533, 578, 1136, 1355
AcuI	CTGAAG	3 cut(s)	303, 2652, 2682
AcyI	GRCGYC	1 cut(s)	2391
AdeI	CACNNNGTG	3 cut(s)	287, 1738, 2012
AfaI	GTAC	4 cut(s)	164, 1114, 1729, 1942
AfiI	CCNNNNNNNGG	7 cut(s)	205, 775, 795, 976, 1286, 2297, 2314
AflII	CTTAAG	2 cut(s)	428, 2065
AflIII	ACRYGT	2 cut(s)	517, 2511
AgeI	ACCGGT	1 cut(s)	1716
AjnI	CCWGG	3 cut(s)	501, 2290, 2307
AluBI	AGCT	8 cut(s)	245, 349, 644, 695, 727, 1126, 1870, 2064
AluI	AGCT	8 cut(s)	245, 349, 644, 695, 727, 1126, 1870, 2064
Alw26I	GTCTC	1 cut(s)	105
AlwI	GGATC	6 cut(s)	485, 1049, 1847, 2334, 2493, 2702
AoxI	GGCC	4 cut(s)	611, 1397, 1549, 2527
ApeKI	GCWGC	2 cut(s)	781, 2105
ApoI	RAATTY	6 cut(s)	253, 391, 533, 578, 1136, 1355
ArsI	GACNNNNNNTTYG	4 cut(s)	1485, 1517, 2279, 2311
AseI	ATTAAT	1 cut(s)	1194
AsiGI	ACCGGT	1 cut(s)	1716
Asp700I	GAANNNNTTC	1 cut(s)	2435
AspS9I	GGNCC	2 cut(s)	1550, 2301
AsuC2I	CCSGG	3 cut(s)	249, 385, 1368
AsuHPI	GGTGA	5 cut(s)	247, 340, 1099, 2501, 2632
AvaII	GGWCC	1 cut(s)	2301
AxyI	CCTNAGG	1 cut(s)	2400
BalI	TGGCCA	2 cut(s)	613, 2529
BauI	CACGAG	1 cut(s)	1703
BbsI	GAAGAC	1 cut(s)	26
BbvI	GCAGC	2 cut(s)	768, 2117
BceAI	ACGGC	3 cut(s)	1445, 1715, 1908
BcgI	CGANNNNNNTGC	2 cut(s)	638, 672
BciT130I	CCWGG	3 cut(s)	503, 2292, 2309
BciVI	GTATCC	1 cut(s)	2111
BclI	TGATCA	3 cut(s)	274, 298, 2637
BcnI	CCSGG	3 cut(s)	249, 385, 1368
BcoDI	GTCTC	1 cut(s)	105
BfaI	CTAG	7 cut(s)	27, 527, 1262, 1284, 1914, 1977, 2333
BfmI	CTRYAG	5 cut(s)	862, 1504, 1647, 2241, 2565
BfrI	CTTAAG	2 cut(s)	428, 2065
BfuI	GTATCC	1 cut(s)	2111
BglII	AGATCT	2 cut(s)	262, 858
BisI	GCNGC	2 cut(s)	782, 2106
BlpI	GCTNAGC	1 cut(s)	645
BlsI	GCNGC	2 cut(s)	783, 2107
Bme1390I	CCNGG	6 cut(s)	249, 385, 503, 1368, 2292, 2309
Bme18I	GGWCC	1 cut(s)	2301
BmgT120I	GGNCC	2 cut(s)	1550, 2301
BmiI	GGNNCC	2 cut(s)	1525, 2302
BmrFI	CCNGG	6 cut(s)	249, 385, 503, 1368, 2292, 2309
BmsI	GCATC	8 cut(s)	194, 216, 621, 1080, 1212, 1580, 1870, 2272
BpiI	GAAGAC	1 cut(s)	26
Bpu1102I	GCTNAGC	1 cut(s)	645
BpuEI	CTTGAG	4 cut(s)	287, 814, 1211, 2146
BpuMI	CCSGG	3 cut(s)	249, 385, 1368
BsaHI	GRCGYC	1 cut(s)	2391
BsaJI	CCNNGG	5 cut(s)	230, 1628, 2290, 2291, 2307
BsaWI	WCCGGW	1 cut(s)	1716
BsaXI	ACNNNNNCTCC	2 cut(s)	1550, 1580
Bsc4I	CCNNNNNNNGG	7 cut(s)	205, 775, 795, 976, 1286, 2297, 2314
Bse118I	RCCGGY	2 cut(s)	1338, 1716
Bse1I	ACTGG	6 cut(s)	117, 1055, 1247, 1400, 2050, 2201
Bse21I	CCTNAGG	1 cut(s)	2400
Bse3DI	GCAATG	3 cut(s)	41, 1218, 1434
BseBI	CCWGG	3 cut(s)	503, 2292, 2309
BseDI	CCNNGG	5 cut(s)	230, 1628, 2290, 2291, 2307
BseLI	CCNNNNNNNGG	7 cut(s)	205, 775, 795, 976, 1286, 2297, 2314
BseMI	GCAATG	3 cut(s)	41, 1218, 1434
BseMII	CTCAG	6 cut(s)	636, 846, 1431, 2211, 2414, 2442
BseNI	ACTGG	6 cut(s)	117, 1055, 1247, 1400, 2050, 2201
BseRI	GAGGAG	1 cut(s)	811
BseXI	GCAGC	2 cut(s)	768, 2117
BseYI	CCCAGC	1 cut(s)	1953
BsgI	GTGCAG	1 cut(s)	1806
BshFI	GGCC	4 cut(s)	613, 1399, 1551, 2529
BshTI	ACCGGT	1 cut(s)	1716
BsiSI	CCGG	6 cut(s)	248, 384, 970, 1339, 1367, 1717
BslFI	GGGAC	1 cut(s)	1957
BslI	CCNNNNNNNGG	7 cut(s)	205, 775, 795, 976, 1286, 2297, 2314
BsmAI	GTCTC	1 cut(s)	105
BsmFI	GGGAC	1 cut(s)	1957
BsnI	GGCC	4 cut(s)	613, 1399, 1551, 2529
Bsp1720I	GCTNAGC	1 cut(s)	645
Bsp19I	CCATGG	1 cut(s)	1628
BspACI	CCGC	1 cut(s)	560
BspANI	GGCC	4 cut(s)	613, 1399, 1551, 2529
BspCNI	CTCAG	6 cut(s)	637, 847, 1432, 2212, 2413, 2443
BspHI	TCATGA	1 cut(s)	760
BspLI	GGNNCC	2 cut(s)	1525, 2302
BspMAI	CTGCAG	2 cut(s)	1651, 2569
BspPI	GGATC	6 cut(s)	485, 1049, 1847, 2334, 2493, 2702
BspTI	CTTAAG	2 cut(s)	428, 2065
BsrDI	GCAATG	3 cut(s)	41, 1218, 1434
BsrFI	RCCGGY	2 cut(s)	1338, 1716
BsrI	ACTGG	6 cut(s)	117, 1055, 1247, 1400, 2050, 2201
BssAI	RCCGGY	2 cut(s)	1338, 1716
BssECI	CCNNGG	5 cut(s)	230, 1628, 2290, 2291, 2307
BssNAI	GTATAC	1 cut(s)	2217
BssNI	GRCGYC	1 cut(s)	2391
BssSI	CACGAG	1 cut(s)	1703
BssT1I	CCWWGG	2 cut(s)	230, 1628
Bst1107I	GTATAC	1 cut(s)	2217
Bst2BI	CACGAG	1 cut(s)	1703
Bst2UI	CCWGG	3 cut(s)	503, 2292, 2309
Bst4CI	ACNGT	3 cut(s)	1945, 2032, 2584
Bst6I	CTCTTC	2 cut(s)	364, 876
BstACI	GRCGYC	1 cut(s)	2391
BstAFI	CTTAAG	2 cut(s)	428, 2065
BstAPI	GCANNNNNTGC	2 cut(s)	1771, 2573
BstC8I	GCNNGC	4 cut(s)	283, 1128, 1340, 2578
BstDEI	CTNAG	8 cut(s)	645, 855, 1009, 1440, 1604, 2220, 2400, 2451
BstDSI	CCRYGG	1 cut(s)	1628
BstENI	CCTNNNNNAGG	2 cut(s)	793, 1284
BstMAI	GTCTC	1 cut(s)	105
BstMWI	GCNNNNNNNGC	4 cut(s)	610, 1708, 1771, 2573
BstNI	CCWGG	3 cut(s)	503, 2292, 2309
BstNSI	RCATGY	5 cut(s)	521, 1567, 1774, 2468, 2515
BstSCI	CCNGG	6 cut(s)	247, 383, 501, 1366, 2290, 2307
BstSFI	CTRYAG	5 cut(s)	862, 1504, 1647, 2241, 2565
BstV1I	GCAGC	2 cut(s)	768, 2117
BstV2I	GAAGAC	1 cut(s)	26
BstX2I	RGATCY	3 cut(s)	262, 858, 2498
BstXI	CCANNNNNNTGG	2 cut(s)	1927, 2096
BstYI	RGATCY	3 cut(s)	262, 858, 2498
BstZ17I	GTATAC	1 cut(s)	2217
Bsu36I	CCTNAGG	1 cut(s)	2400
BsuI	GTATCC	1 cut(s)	2111
BsuRI	GGCC	4 cut(s)	613, 1399, 1551, 2529
BtgI	CCRYGG	1 cut(s)	1628
BtsI	GCAGTG	1 cut(s)	292
BtsIMutI	CAGTG	3 cut(s)	292, 2043, 2685
Cac8I	GCNNGC	4 cut(s)	283, 1128, 1340, 2578
CciI	TCATGA	1 cut(s)	760
Cfr10I	RCCGGY	2 cut(s)	1338, 1716
Cfr13I	GGNCC	2 cut(s)	1550, 2301
Csp6I	GTAC	4 cut(s)	163, 1113, 1728, 1941
CspAI	ACCGGT	1 cut(s)	1716
CviQI	GTAC	4 cut(s)	163, 1113, 1728, 1941
DdeI	CTNAG	8 cut(s)	645, 855, 1009, 1440, 1604, 2220, 2400, 2451
DraI	TTTAAA	1 cut(s)	1186
DraIII	CACNNNGTG	3 cut(s)	287, 1738, 2012
EaeI	YGGCCR	2 cut(s)	611, 2527
Eam1104I	CTCTTC	2 cut(s)	364, 876
EarI	CTCTTC	2 cut(s)	364, 876
Eco130I	CCWWGG	2 cut(s)	230, 1628
Eco32I	GATATC	1 cut(s)	315
Eco47I	GGWCC	1 cut(s)	2301
Eco57I	CTGAAG	3 cut(s)	303, 2652, 2682
Eco81I	CCTNAGG	1 cut(s)	2400
EcoNI	CCTNNNNNAGG	2 cut(s)	793, 1284
EcoO109I	RGGNCCY	1 cut(s)	2301
EcoRI	GAATTC	1 cut(s)	533
EcoRII	CCWGG	3 cut(s)	501, 2290, 2307
EcoRV	GATATC	1 cut(s)	315
EcoT14I	CCWWGG	2 cut(s)	230, 1628
ErhI	CCWWGG	2 cut(s)	230, 1628
FalI	AAGNNNNNCTT	6 cut(s)	87, 119, 876, 908, 2535, 2567
FaqI	GGGAC	1 cut(s)	1957
FauI	CCCGC	1 cut(s)	567
FauNDI	CATATG	1 cut(s)	1068
FbaI	TGATCA	3 cut(s)	274, 298, 2637
FblI	GTMKAC	1 cut(s)	2216
Fnu4HI	GCNGC	2 cut(s)	782, 2106
Fsp4HI	GCNGC	2 cut(s)	782, 2106
FspBI	CTAG	7 cut(s)	27, 527, 1262, 1284, 1914, 1977, 2333
GluI	GCNGC	2 cut(s)	782, 2106
GsaI	CCCAGC	1 cut(s)	1957
HaeIII	GGCC	4 cut(s)	613, 1399, 1551, 2529
HapII	CCGG	6 cut(s)	248, 384, 970, 1339, 1367, 1717
Hin1I	GRCGYC	1 cut(s)	2391
HincII	GTYRAC	2 cut(s)	499, 1624
HindII	GTYRAC	2 cut(s)	499, 1624
HindIII	AAGCTT	1 cut(s)	1868
HinfI	GANTC	7 cut(s)	410, 757, 1082, 1682, 1833, 2406, 2651
HpaI	GTTAAC	1 cut(s)	1624
HpaII	CCGG	6 cut(s)	248, 384, 970, 1339, 1367, 1717
HphI	GGTGA	5 cut(s)	247, 340, 1099, 2501, 2632
Hpy166II	GTNNAC	5 cut(s)	238, 499, 1276, 1624, 2217
Hpy8I	GTNNAC	5 cut(s)	238, 499, 1276, 1624, 2217
HpyAV	CCTTC	7 cut(s)	210, 799, 842, 858, 1023, 1978, 2365
HpyCH4III	ACNGT	3 cut(s)	1945, 2032, 2584
HpyCH4IV	ACGT	1 cut(s)	2391
HpyF10VI	GCNNNNNNNGC	4 cut(s)	610, 1708, 1771, 2573
HpyF3I	CTNAG	8 cut(s)	645, 855, 1009, 1440, 1604, 2220, 2400, 2451
HpySE526I	ACGT	1 cut(s)	2391
Hsp92I	GRCGYC	1 cut(s)	2391
KroI	GCCGGC	1 cut(s)	1338
KroNI	GCCGGC	1 cut(s)	1340
Ksp22I	TGATCA	3 cut(s)	274, 298, 2637
KspAI	GTTAAC	1 cut(s)	1624
LmnI	GCTCC	3 cut(s)	250, 1216, 1904
Lsp1109I	GCAGC	2 cut(s)	768, 2117
LweI	GCATC	8 cut(s)	194, 216, 621, 1080, 1212, 1580, 1870, 2272
MaeI	CTAG	7 cut(s)	27, 527, 1262, 1284, 1914, 1977, 2333
MaeII	ACGT	1 cut(s)	2391
MaeIII	GTNAC	6 cut(s)	900, 1453, 1749, 1888, 2041, 2133
MfeI	CAATTG	2 cut(s)	1875, 1962
MflI	RGATCY	3 cut(s)	262, 858, 2498
MlsI	TGGCCA	2 cut(s)	613, 2529
MluNI	TGGCCA	2 cut(s)	613, 2529
MlyI	GAGTC	2 cut(s)	1091, 2415
MmeI	TCCRAC	8 cut(s)	380, 572, 1039, 1055, 1908, 2162, 2304, 2566
Mox20I	TGGCCA	2 cut(s)	613, 2529
MroNI	GCCGGC	1 cut(s)	1338
MroXI	GAANNNNTTC	1 cut(s)	2435
MscI	TGGCCA	2 cut(s)	613, 2529
MseI	TTAA	9 cut(s)	50, 429, 894, 1185, 1194, 1623, 1797, 2066, 2250
MslI	CAYNNNNRTG	2 cut(s)	1568, 2444
Msp20I	TGGCCA	2 cut(s)	613, 2529
MspA1I	CMGCKG	1 cut(s)	644
MspCI	CTTAAG	2 cut(s)	428, 2065
MspI	CCGG	6 cut(s)	248, 384, 970, 1339, 1367, 1717
MspR9I	CCNGG	6 cut(s)	249, 385, 503, 1368, 2292, 2309
MunI	CAATTG	2 cut(s)	1875, 1962
MvaI	CCWGG	3 cut(s)	503, 2292, 2309
MwoI	GCNNNNNNNGC	4 cut(s)	610, 1708, 1771, 2573
NaeI	GCCGGC	1 cut(s)	1340
NciI	CCSGG	3 cut(s)	249, 385, 1368
NcoI	CCATGG	1 cut(s)	1628
NdeI	CATATG	1 cut(s)	1068
NgoMIV	GCCGGC	1 cut(s)	1338
NlaIV	GGNNCC	2 cut(s)	1525, 2302
NmuCI	GTSAC	4 cut(s)	1453, 1749, 2041, 2133
NspI	RCATGY	5 cut(s)	521, 1567, 1774, 2468, 2515
PagI	TCATGA	1 cut(s)	760
PasI	CCCWGGG	1 cut(s)	2291
PciI	ACATGT	2 cut(s)	517, 2511
PdiI	GCCGGC	1 cut(s)	1340
PdmI	GAANNNNTTC	1 cut(s)	2435
PfeI	GAWTC	5 cut(s)	410, 757, 1682, 1833, 2651
PflMI	CCANNNNNTGG	1 cut(s)	775
PfoI	TCCNGGA	1 cut(s)	247
PinAI	ACCGGT	1 cut(s)	1716
PkrI	GCNGC	2 cut(s)	783, 2107
PleI	GAGTC	2 cut(s)	1090, 2414
PpsI	GAGTC	2 cut(s)	1090, 2414
PpuMI	RGGWCCY	1 cut(s)	2301
PscI	ACATGT	2 cut(s)	517, 2511
PshBI	ATTAAT	1 cut(s)	1194
PsiI	TTATAA	1 cut(s)	731
Psp5II	RGGWCCY	1 cut(s)	2301
Psp6I	CCWGG	3 cut(s)	501, 2290, 2307
PspFI	CCCAGC	1 cut(s)	1953
PspGI	CCWGG	3 cut(s)	501, 2290, 2307
PspN4I	GGNNCC	2 cut(s)	1525, 2302
PspPI	GGNCC	2 cut(s)	1550, 2301
PspPPI	RGGWCCY	1 cut(s)	2301
PstI	CTGCAG	2 cut(s)	1651, 2569
PsuI	RGATCY	3 cut(s)	262, 858, 2498
PvuII	CAGCTG	1 cut(s)	644
RsaI	GTAC	4 cut(s)	164, 1114, 1729, 1942
RsaNI	GTAC	4 cut(s)	163, 1113, 1728, 1941
RseI	CAYNNNNRTG	2 cut(s)	1568, 2444
SaqAI	TTAA	9 cut(s)	50, 429, 894, 1185, 1194, 1623, 1797, 2066, 2250
SatI	GCNGC	2 cut(s)	782, 2106
Sau96I	GGNCC	2 cut(s)	1550, 2301
SchI	GAGTC	2 cut(s)	1091, 2415
ScrFI	CCNGG	6 cut(s)	249, 385, 503, 1368, 2292, 2309
SfaNI	GCATC	8 cut(s)	194, 216, 621, 1080, 1212, 1580, 1870, 2272
SfcI	CTRYAG	5 cut(s)	862, 1504, 1647, 2241, 2565
SinI	GGWCC	1 cut(s)	2301
SmiMI	CAYNNNNRTG	2 cut(s)	1568, 2444
SmlI	CTYRAG	6 cut(s)	266, 428, 793, 1226, 2065, 2125
SmoI	CTYRAG	6 cut(s)	266, 428, 793, 1226, 2065, 2125
SsiI	CCGC	1 cut(s)	560
SspI	AATATT	1 cut(s)	1022
SspMI	CTAG	7 cut(s)	27, 527, 1262, 1284, 1914, 1977, 2333
StyD4I	CCNGG	6 cut(s)	247, 383, 501, 1366, 2290, 2307
StyI	CCWWGG	2 cut(s)	230, 1628
TaaI	ACNGT	3 cut(s)	1945, 2032, 2584
TaiI	ACGT	1 cut(s)	2394
TaqI	TCGA	3 cut(s)	311, 658, 2278
TaqII	GACCGA	1 cut(s)	657
TatI	WGTACW	1 cut(s)	1112
TfiI	GAWTC	5 cut(s)	410, 757, 1682, 1833, 2651
Tru1I	TTAA	9 cut(s)	50, 429, 894, 1185, 1194, 1623, 1797, 2066, 2250
Tru9I	TTAA	9 cut(s)	50, 429, 894, 1185, 1194, 1623, 1797, 2066, 2250
TscAI	CASTG	3 cut(s)	292, 2050, 2692
TseFI	GTSAC	4 cut(s)	1453, 1749, 2041, 2133
TseI	GCWGC	2 cut(s)	781, 2105
Tsp45I	GTSAC	4 cut(s)	1453, 1749, 2041, 2133
TspGWI	ACGGA	2 cut(s)	1607, 2700
TspRI	CASTG	3 cut(s)	292, 2050, 2692
Van91I	CCANNNNNTGG	1 cut(s)	775
Vha464I	CTTAAG	2 cut(s)	428, 2065
VpaK11BI	GGWCC	1 cut(s)	2301
VspI	ATTAAT	1 cut(s)	1194
XagI	CCTNNNNNAGG	2 cut(s)	793, 1284
XapI	RAATTY	6 cut(s)	253, 391, 533, 578, 1136, 1355
XbaI	TCTAGA	1 cut(s)	2332
XceI	RCATGY	5 cut(s)	521, 1567, 1774, 2468, 2515
XmiI	GTMKAC	1 cut(s)	2216
XmnI	GAANNNNTTC	1 cut(s)	2435
XspI	CTAG	7 cut(s)	27, 527, 1262, 1284, 1914, 1977, 2333
ZraI	GACGTC	1 cut(s)	2392

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.