Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0002700

Physical Location & Seq

Genomic Coordinates Forward (+)

8479368 .. 8484004

Gene Structure 4637 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G007920.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2571 bp

ATGATGTCCAAATCGTATACCAACCTTTTGGATCTAGCGTCCGGCAACTTTCCGATAATGGGTCGGGAAAGGAAGAGGCTTCCACGAGTAATGACCGTGGCCGGGGTTATATCGGAGCTTGACGATGATAACGCCAACAGTGTGTCGTCGGATGTTCCGTCGTCGATTGTGCAGGACCGGATTATTATTGTGGCTAATCAGCTGCCGGTAAAAGCTAAGCGTAGACCTGATAACAAAGGATGGAGTTTTAGTTGGGATGAGGACTCATTGCTATTGCAGTTAAAGGATGGTTTGCCCGAAGAAATGGAGGTTTTGTATGTAGGTTCTTTGAATGTAGAGGTGGATTCGAATGAACAAGATGATGTGTCACAGCTTCTGTTGGATAGGTTTAAGTGTGTTCCAGCCTTCCTGCCTACCGACATTTTGACCAAGTTCTATCATGGGTTTTGTAAGCAGCAGTTGTGGCCTTTGTTTCATTACATGCTTCCATTTTCAGCAAATCACGGTGGAAGGTTCGACCGGACTTTGTGGGAGGCGTATGTGGCTGCAAATAAGATCTTCTCACAAAGGGTGATTGAAGTCATAAATCCTGAGGATGATTATGTATGGATTCATGATTATCATTTAATGGTGCTGCCGACCTTCTTGAGGAGGAGGTTTAATAGATTGAGAATGGGGTTTTTTCTTCACAGCCCCTTCCCGTCATCAGAAATTTACAGGACTCTACCTGTCAGGGAAGAGATTCTTAAGGCTCTTTTAAATTCGGACCTTATTGGTTTCCACACTTTTGATTATGCTCGGCATTTCTTGTCTTGTTGCAGTCGAATGTTGGGTTTGGAGTATCAGTCAAAAAGAGGTTATATTGGGTTGGATTATTATGGAAGGACAGTCGGGATAAAGATCATGCCTGTTGGGATTCACATGGGGCAGATTCACTCAGTGTTAAAACTTGCAGATAAGGAGTGGAGGGTGGAAGAACTAAAACAAAAGTTTGAAGGAAAGACTGTGTTGCTTGGTGTTGATGATATGGATATCTTTAAAGGTGTCAATTTGAAGCTCTTGGCAATGGAACAGATGCTGAAGCAGCACCCTAAGTGGCAGGGGAGAGCAGTTTTGGTACAGATAGCAAATCCAGCTAGGGGAAGAGGGAAAGATCTTGAGGAAACACAGGCTGAAATCTATGCAAGCGTCAAGAGGATAAATGAAAAATATGGTCAGAATGGATATGAACCCATTGTCTTCATTGATAAACCAGTCTCTCTTAGTGAAAGAGTTGCGTATTACACAGTAGCCGAGTGTGTGGTGGTCACTGCTGTGAGGGATGGGATGAATCTTATTCCATATGAGTACATTGTATGCAGGCAAGGGAACTCTGCATCAGAATCTGAATCAGAATCAGAATCCAGTGGTCCCAAGAAGAGCATGCTGGTTGTATCAGAGTTCATTGGATGTTCACCTTCACTTAGTGGTGCAATTCGGGTTAACCCATGGAATGTTGAATCAACAGCTGAGGCCATGAATGAGGCAATTTCAATGGCTGAACCGGAGAAACAGTTGAGACATGAGAAGCATTATAGGTATGTTAGTACACATGATGTGGCTTACTGGTCGCGAAGTGTTTTCCAGGACATGGAGAGAACGTGCAAAGACCATTTCAGAAGACGTTGCTGGGGAATTGGTCTGGGTTTTGGCTTCAGGGTTATAGCACTGGATCCTAACTTCAGAAAACTGTCTATTGATGCCATTGTGAATGCCTATGTGAAATCTAAGAGGAGGGCTATATTGTTAGATTATGATGGCACCGTGATGCCTCAAACATCTATAAATAAGACCCCAAGTCAAGAGGTCATCTCCCTAATCAATACACTTTGTGGTGATGTTAAAAACACTGTTTTTGTGGTCAGTGGAAGAGGAAGGGATAGTTTGAGCAAGTGGTTTTCTCCTTGCAAGAAACTTGGAATTGCTGCTGAACACGGTTATTTTGTAAGGTGGTCTGCCGACAAGGATTGGGAAATTTGTGGACAGAGTAGTGATTTTGGGTGGATACAGATAGCTGAGCCAGTTATGAAATTGTATACAGAAGCCACTGATGGATCTTCTATTGAAACCAAGGAGAGTGCATTGGTTTGGCACCATCGAGATGCCGACCCGGGTTTTGGATCCAGCCAGGCTAAAGAATTGTTGGACCATCTAGAAAGTGTGTTGGCAAACGAACCAGTAGCTGCCAAGAGTGGTCAATATATTGTAGAAGTAAAGCCACAGGGTGTCAGTAAAGGCCTGGTCGCTGAAAAGGTATTCACATCGATGCACGAGAGTGGGAAGCAGGCAGATTTTGTTTTGTGCATTGGTGATGATAGATCTGATGAGGACATGTTTGAGATTATCGGCAATGCGCTCAATAATGGTGTCATCTCCTCAAATACGAGTGTTTTTGCATGCACCGTTGGACAGAAACCTAGTAAAGCCAAGTACTATTTGGATGACCCTACTGATGTCATAATGATGCTTGAAGCTCTTGCAGACGCTTCAGATTCTCCGCCTTCCTCAGACGGCGAAGCAGGAAGCCCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005975 GO:0005984 GO:0005991 GO:0005992 GO:0006793 GO:0006796 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009311 GO:0009312 GO:0009987 GO:0016051 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0033554 GO:0034637 GO:0042578 GO:0044237 GO:0044238 GO:0044249 GO:0044262 GO:0044424 GO:0044444 GO:0044464 GO:0046351 GO:0050896 GO:0051716 GO:0070413 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glyco_transf_20 Trehalose_PPase

Protein Analysis

856

Amino Acids

96.45

Weight (kDa)

5.82

Isoelectric Point (pI)

46.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_20	PF00982	60 - 545	1.4e-184	Glycosyltransferase family 20
Trehalose_PPase	PF02358	595 - 829	1.3e-80	Trehalose-phosphatase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002700)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06410 AT1G06410 AT1G06410
fragaria_vesca	FvH4_3g07260 FvH4_6g27760 FvH4_6g27760
malus_domestica	MD00G1008700.v1.1 MD09G1234800.v1.1 MD10G1275100.v1.1
prunus_persica	Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.3G113100_v2.0.a1 Prupe.4G067300_v2.0.a1
pyrus_communis	pycom05g27390 pycom09g15300 pycom10g22970
rosa_chinensis	RchiOBHm_Chr2g0131021 RchiOBHm_Chr5g0011801
rosa_laevigata	RLG00000019161 RLG00000031862
rosa_multiflora	Rmu_sc0003629.1_g000054 Rmu_ssc0000357.1_g000005
rosa_roxburghii	Rroxscaffold_1G00064760
rosa_rugosa	Rorug02G0294400 Rorug04G0459400
rosa_samantha	Rh2AG346700 Rh2BG354100 Rh2CG332700 Rh2DG372200 Rh5AG090700 Rh5BG086300 Rh5CG100100 Rh5DG086400
rosa_wichuraiana	Rw0G018970 Rw2G028110 Rw2G028150 Rw5G007920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	1799, 2130
AccB7I	CCANNNNNTGG	1 cut(s)	1630
AccI	GTMKAC	3 cut(s)	17, 223, 2075
AccII	CGCG	1 cut(s)	1612
AciI	CCGC	1 cut(s)	2537
AclWI	GGATC	6 cut(s)	39, 1706, 1719, 2101, 2154, 2167
AcoI	YGGCCR	1 cut(s)	99
AcsI	RAATTY	3 cut(s)	711, 760, 2013
AcuI	CTGAAG	4 cut(s)	1100, 1678, 1705, 2511
AdeI	CACNNNGTG	4 cut(s)	940, 1466, 1871, 2264
AfaI	GTAC	4 cut(s)	1119, 1349, 1588, 2471
AfiI	CCNNNNNNNGG	6 cut(s)	59, 102, 648, 1139, 1630, 2156
AflII	CTTAAG	1 cut(s)	746
AflIII	ACRYGT	1 cut(s)	2370
AgsI	TTSAA	8 cut(s)	331, 578, 995, 1054, 1499, 1533, 2105, 2510
AhdI	GACNNNNNGTC	1 cut(s)	1836
AjnI	CCWGG	3 cut(s)	1623, 2166, 2277
AleI	CACNNNNGTG	2 cut(s)	1313, 2313
Alw26I	GTCTC	2 cut(s)	1261, 1552
AlwI	GGATC	6 cut(s)	39, 1706, 1719, 2101, 2154, 2167
AlwNI	CAGNNNCTG	4 cut(s)	376, 1078, 1385, 2222
Ama87I	CYCGRG	1 cut(s)	2149
AoxI	GGCC	4 cut(s)	99, 464, 1512, 2275
ApeKI	GCWGC	7 cut(s)	202, 454, 545, 634, 1084, 1964, 2222
ApoI	RAATTY	3 cut(s)	711, 760, 2013
ArsI	GACNNNNNNTTYG	2 cut(s)	2138, 2170
Asp700I	GAANNNNTTC	1 cut(s)	741
AspLEI	GCGC	1 cut(s)	2395
AspS9I	GGNCC	4 cut(s)	175, 766, 1409, 2185
AsuC2I	CCSGG	3 cut(s)	103, 2150, 2151
AsuHPI	GGTGA	4 cut(s)	583, 1446, 1886, 2360
AsuII	TTCGAA	1 cut(s)	347
AvaI	CYCGRG	1 cut(s)	2149
AvaII	GGWCC	4 cut(s)	175, 766, 1409, 2185
AxyI	CCTNAGG	1 cut(s)	591
BamHI	GGATCC	2 cut(s)	1711, 2159
BanI	GGYRCC	2 cut(s)	1799, 2130
BauI	CACGAG	2 cut(s)	84, 2309
BbsI	GAAGAC	2 cut(s)	1231, 1666
BbvCI	CCTCAGC	1 cut(s)	1509
BbvI	GCAGC	7 cut(s)	189, 466, 532, 621, 1096, 1951, 2209
BccI	CCATC	7 cut(s)	234, 281, 1316, 1790, 2084, 2142, 2196
BceAI	ACGGC	1 cut(s)	2566
BciT130I	CCWGG	3 cut(s)	1625, 2168, 2279
BciVI	GTATCC	1 cut(s)	2037
BcnI	CCSGG	3 cut(s)	103, 2150, 2151
BcoDI	GTCTC	2 cut(s)	1261, 1552
BfaI	CTAG	4 cut(s)	35, 1137, 2192, 2457
BfrI	CTTAAG	1 cut(s)	746
BfuI	GTATCC	1 cut(s)	2037
BglII	AGATCT	3 cut(s)	555, 1153, 2357
BisI	GCNGC	7 cut(s)	203, 455, 546, 635, 1085, 1965, 2223
BlpI	GCTNAGC	2 cut(s)	216, 2055
BlsI	GCNGC	7 cut(s)	204, 456, 547, 636, 1086, 1966, 2224
BmcAI	AGTACT	1 cut(s)	2471
Bme1390I	CCNGG	6 cut(s)	103, 1625, 2150, 2151, 2168, 2279
Bme18I	GGWCC	4 cut(s)	175, 766, 1409, 2185
BmeRI	GACNNNNNGTC	1 cut(s)	1836
BmeT110I	CYCGRG	1 cut(s)	2149
BmgT120I	GGNCC	4 cut(s)	175, 766, 1409, 2185
BmiI	GGNNCC	5 cut(s)	1411, 1713, 1801, 2132, 2161
BmrFI	CCNGG	6 cut(s)	103, 1625, 2150, 2151, 2168, 2279
BmsI	GCATC	7 cut(s)	1065, 1385, 1729, 1797, 2131, 2295, 2493
BpiI	GAAGAC	2 cut(s)	1231, 1666
BplI	GAGNNNNNCTC	2 cut(s)	1835, 1867
Bpu10I	CCTNAGC	1 cut(s)	1509
Bpu1102I	GCTNAGC	2 cut(s)	216, 2055
Bpu14I	TTCGAA	1 cut(s)	347
BpuEI	CTTGAG	2 cut(s)	667, 1178
BpuMI	CCSGG	3 cut(s)	103, 2150, 2151
Bsa29I	ATCGAT	1 cut(s)	2303
BsaBI	GATNNNNATC	1 cut(s)	899
BsaJI	CCNNGG	5 cut(s)	96, 102, 1487, 2109, 2149
BsaWI	WCCGGW	3 cut(s)	177, 519, 1543
Bsc4I	CCNNNNNNNGG	6 cut(s)	59, 102, 648, 1139, 1630, 2156
Bse118I	RCCGGY	1 cut(s)	205
Bse1I	ACTGG	6 cut(s)	1253, 1404, 1610, 1713, 2060, 2216
Bse21I	CCTNAGG	1 cut(s)	591
Bse3DI	GCAATG	3 cut(s)	266, 1071, 2395
Bse8I	GATNNNNATC	1 cut(s)	899
BseBI	CCWGG	3 cut(s)	1625, 2168, 2279
BseCI	ATCGAT	1 cut(s)	2303
BseDI	CCNNGG	5 cut(s)	96, 102, 1487, 2109, 2149
BseGI	GGATG	9 cut(s)	157, 245, 262, 292, 601, 1327, 1332, 1454, 2485
BseJI	GATNNNNATC	1 cut(s)	899
BseLI	CCNNNNNNNGG	6 cut(s)	59, 102, 648, 1139, 1630, 2156
BseMI	GCAATG	3 cut(s)	266, 1071, 2395
BseMII	CTCAG	5 cut(s)	582, 951, 1500, 2046, 2559
BseNI	ACTGG	6 cut(s)	1253, 1404, 1610, 1713, 2060, 2216
BseRI	GAGGAG	4 cut(s)	664, 667, 1786, 2404
BseXI	GCAGC	7 cut(s)	189, 466, 532, 621, 1096, 1951, 2209
BseYI	CCCAGC	1 cut(s)	1668
BsgI	GTGCAG	1 cut(s)	191
Bsh1236I	CGCG	1 cut(s)	1612
Bsh1285I	CGRYCG	1 cut(s)	520
BshFI	GGCC	4 cut(s)	101, 466, 1514, 2277
BshNI	GGYRCC	2 cut(s)	1799, 2130
BshVI	ATCGAT	1 cut(s)	2303
BsiEI	CGRYCG	1 cut(s)	520
BsiHKCI	CYCGRG	1 cut(s)	2149
BsiSI	CCGG	7 cut(s)	42, 102, 178, 206, 520, 1544, 2150
BslFI	GGGAC	1 cut(s)	1395
BslI	CCNNNNNNNGG	6 cut(s)	59, 102, 648, 1139, 1630, 2156
BsmAI	GTCTC	2 cut(s)	1261, 1552
BsmFI	GGGAC	1 cut(s)	1395
BsmI	GAATGC	1 cut(s)	1756
BsnI	GGCC	4 cut(s)	101, 466, 1514, 2277
BsoBI	CYCGRG	1 cut(s)	2149
Bsp119I	TTCGAA	1 cut(s)	347
Bsp143I	GATC	8 cut(s)	31, 555, 900, 1153, 1711, 2093, 2159, 2357
Bsp1720I	GCTNAGC	2 cut(s)	216, 2055
Bsp19I	CCATGG	1 cut(s)	1487
Bsp68I	TCGCGA	1 cut(s)	1612
BspACI	CCGC	1 cut(s)	2537
BspANI	GGCC	4 cut(s)	101, 466, 1514, 2277
BspCNI	CTCAG	5 cut(s)	583, 950, 1501, 2047, 2558
BspDI	ATCGAT	1 cut(s)	2303
BspFNI	CGCG	1 cut(s)	1612
BspHI	TCATGA	1 cut(s)	613
BspLI	GGNNCC	5 cut(s)	1411, 1713, 1801, 2132, 2161
BspPI	GGATC	6 cut(s)	39, 1706, 1719, 2101, 2154, 2167
BspQI	GCTCTTC	1 cut(s)	1412
BspT104I	TTCGAA	1 cut(s)	347
BspT107I	GGYRCC	2 cut(s)	1799, 2130
BspTI	CTTAAG	1 cut(s)	746
BsrDI	GCAATG	3 cut(s)	266, 1071, 2395
BsrFI	RCCGGY	1 cut(s)	205
BsrI	ACTGG	6 cut(s)	1253, 1404, 1610, 1713, 2060, 2216
BssAI	RCCGGY	1 cut(s)	205
BssECI	CCNNGG	5 cut(s)	96, 102, 1487, 2109, 2149
BssMI	GATC	8 cut(s)	31, 555, 900, 1153, 1711, 2093, 2159, 2357
BssNAI	GTATAC	2 cut(s)	18, 2076
BssSI	CACGAG	2 cut(s)	84, 2309
BssT1I	CCWWGG	2 cut(s)	1487, 2109
Bst1107I	GTATAC	2 cut(s)	18, 2076
Bst2BI	CACGAG	2 cut(s)	84, 2309
Bst2UI	CCWGG	3 cut(s)	1625, 2168, 2279
Bst6I	CTCTTC	5 cut(s)	68, 732, 1138, 1412, 1903
BstAFI	CTTAAG	1 cut(s)	746
BstBI	TTCGAA	1 cut(s)	347
BstC8I	GCNNGC	5 cut(s)	1186, 1361, 1424, 2325, 2437
BstDSI	CCRYGG	2 cut(s)	96, 1487
BstENI	CCTNNNNNAGG	1 cut(s)	646
BstF5I	GGATG	9 cut(s)	157, 245, 262, 292, 601, 1327, 1332, 1454, 2485
BstFNI	CGCG	1 cut(s)	1612
BstHHI	GCGC	1 cut(s)	2395
BstKTI	GATC	8 cut(s)	34, 558, 903, 1156, 1714, 2096, 2162, 2360
BstMAI	GTCTC	2 cut(s)	1261, 1552
BstMBI	GATC	8 cut(s)	31, 555, 900, 1153, 1711, 2093, 2159, 2357
BstMCI	CGRYCG	1 cut(s)	520
BstMWI	GCNNNNNNNGC	4 cut(s)	463, 542, 1084, 1133
BstNI	CCWGG	3 cut(s)	1625, 2168, 2279
BstNSI	RCATGY	4 cut(s)	484, 1426, 2374, 2439
BstSCI	CCNGG	6 cut(s)	101, 1623, 2148, 2149, 2166, 2277
BstUI	CGCG	1 cut(s)	1612
BstV1I	GCAGC	7 cut(s)	189, 466, 532, 621, 1096, 1951, 2209
BstV2I	GAAGAC	2 cut(s)	1231, 1666
BstX2I	RGATCY	7 cut(s)	31, 555, 1153, 1711, 2093, 2159, 2357
BstXI	CCANNNNNNTGG	1 cut(s)	28
BstYI	RGATCY	7 cut(s)	31, 555, 1153, 1711, 2093, 2159, 2357
BstZ17I	GTATAC	2 cut(s)	18, 2076
Bsu15I	ATCGAT	1 cut(s)	2303
Bsu36I	CCTNAGG	1 cut(s)	591
BsuI	GTATCC	1 cut(s)	2037
BsuRI	GGCC	4 cut(s)	101, 466, 1514, 2277
BsuTUI	ATCGAT	1 cut(s)	2303
BtgI	CCRYGG	2 cut(s)	96, 1487
BtsCI	GGATG	9 cut(s)	157, 245, 262, 292, 601, 1327, 1332, 1454, 2485
BtsI	GCAGTG	1 cut(s)	1308
BtsIMutI	CAGTG	8 cut(s)	145, 945, 1308, 1411, 1706, 1887, 1909, 2085
BtuMI	TCGCGA	1 cut(s)	1612
Cac8I	GCNNGC	5 cut(s)	1186, 1361, 1424, 2325, 2437
CaiI	CAGNNNCTG	4 cut(s)	376, 1078, 1385, 2222
CciI	TCATGA	1 cut(s)	613
CfoI	GCGC	1 cut(s)	2395
Cfr10I	RCCGGY	1 cut(s)	205
Cfr13I	GGNCC	4 cut(s)	175, 766, 1409, 2185
Cfr9I	CCCGGG	1 cut(s)	2149
ClaI	ATCGAT	1 cut(s)	2303
CseI	GACGC	3 cut(s)	27, 1177, 2531
Csp6I	GTAC	4 cut(s)	1118, 1348, 1587, 2470
CviQI	GTAC	4 cut(s)	1118, 1348, 1587, 2470
DpnI	GATC	8 cut(s)	33, 557, 902, 1155, 1713, 2095, 2161, 2359
DpnII	GATC	8 cut(s)	31, 555, 900, 1153, 1711, 2093, 2159, 2357
DraI	TTTAAA	2 cut(s)	759, 1039
DraIII	CACNNNGTG	4 cut(s)	940, 1466, 1871, 2264
DriI	GACNNNNNGTC	1 cut(s)	1836
EaeI	YGGCCR	1 cut(s)	99
Eam1104I	CTCTTC	5 cut(s)	68, 732, 1138, 1412, 1903
Eam1105I	GACNNNNNGTC	1 cut(s)	1836
EarI	CTCTTC	5 cut(s)	68, 732, 1138, 1412, 1903
EciI	GGCGGA	1 cut(s)	2526
Eco130I	CCWWGG	2 cut(s)	1487, 2109
Eco147I	AGGCCT	1 cut(s)	2277
Eco32I	GATATC	1 cut(s)	1033
Eco47I	GGWCC	4 cut(s)	175, 766, 1409, 2185
Eco57I	CTGAAG	4 cut(s)	1100, 1678, 1705, 2511
Eco81I	CCTNAGG	1 cut(s)	591
Eco88I	CYCGRG	1 cut(s)	2149
EcoNI	CCTNNNNNAGG	1 cut(s)	646
EcoRII	CCWGG	3 cut(s)	1623, 2166, 2277
EcoRV	GATATC	1 cut(s)	1033
EcoT14I	CCWWGG	2 cut(s)	1487, 2109
ErhI	CCWWGG	2 cut(s)	1487, 2109
FalI	AAGNNNNNCTT	2 cut(s)	729, 761
FaqI	GGGAC	1 cut(s)	1395
FauNDI	CATATG	1 cut(s)	1342
FblI	GTMKAC	3 cut(s)	17, 223, 2075
Fnu4HI	GCNGC	7 cut(s)	203, 455, 546, 635, 1085, 1965, 2223
FokI	GGATG	9 cut(s)	164, 252, 269, 299, 608, 1334, 1339, 1461, 2492
Fsp4HI	GCNGC	7 cut(s)	203, 455, 546, 635, 1085, 1965, 2223
FspBI	CTAG	4 cut(s)	35, 1137, 2192, 2457
GlaI	GCGC	1 cut(s)	2394
GluI	GCNGC	7 cut(s)	203, 455, 546, 635, 1085, 1965, 2223
GsaI	CCCAGC	1 cut(s)	1672
HaeIII	GGCC	4 cut(s)	101, 466, 1514, 2277
HapII	CCGG	7 cut(s)	42, 102, 178, 206, 520, 1544, 2150
HgaI	GACGC	3 cut(s)	27, 1177, 2531
HhaI	GCGC	1 cut(s)	2395
Hin6I	GCGC	1 cut(s)	2393
HinP1I	GCGC	1 cut(s)	2393
HincII	GTYRAC	1 cut(s)	1483
HindII	GTYRAC	1 cut(s)	1483
HpaI	GTTAAC	1 cut(s)	1483
HpaII	CCGG	7 cut(s)	42, 102, 178, 206, 520, 1544, 2150
HphI	GGTGA	4 cut(s)	583, 1446, 1886, 2360
Hpy166II	GTNNAC	7 cut(s)	18, 224, 1454, 1483, 1589, 2021, 2076
Hpy8I	GTNNAC	7 cut(s)	18, 224, 1454, 1483, 1589, 2021, 2076
Hpy99I	CGWCG	3 cut(s)	151, 163, 166
HpyAV	CCTTC	9 cut(s)	415, 504, 652, 706, 876, 989, 1467, 1908, 2550
HpyCH4IV	ACGT	2 cut(s)	1640, 1663
HpyF10VI	GCNNNNNNNGC	4 cut(s)	463, 542, 1084, 1133
HpySE526I	ACGT	2 cut(s)	1640, 1663
HspAI	GCGC	1 cut(s)	2393
KspAI	GTTAAC	1 cut(s)	1483
Kzo9I	GATC	8 cut(s)	31, 555, 900, 1153, 1711, 2093, 2159, 2357
LguI	GCTCTTC	1 cut(s)	1412
LmnI	GCTCC	1 cut(s)	115
Lsp1109I	GCAGC	7 cut(s)	189, 466, 532, 621, 1096, 1951, 2209
LweI	GCATC	7 cut(s)	1065, 1385, 1729, 1797, 2131, 2295, 2493
MaeI	CTAG	4 cut(s)	35, 1137, 2192, 2457
MaeII	ACGT	2 cut(s)	1640, 1663
MaeIII	GTNAC	2 cut(s)	366, 1306
MalI	GATC	8 cut(s)	33, 557, 902, 1155, 1713, 2095, 2161, 2359
MboI	GATC	8 cut(s)	31, 555, 900, 1153, 1711, 2093, 2159, 2357
MflI	RGATCY	7 cut(s)	31, 555, 1153, 1711, 2093, 2159, 2357
MlyI	GAGTC	2 cut(s)	257, 715
MmeI	TCCRAC	5 cut(s)	129, 360, 849, 2163, 2425
MroXI	GAANNNNTTC	1 cut(s)	741
MslI	CAYNNNNRTG	6 cut(s)	1313, 1805, 2139, 2303, 2313, 2501
MspA1I	CMGCKG	2 cut(s)	202, 1508
MspCI	CTTAAG	1 cut(s)	746
MspI	CCGG	7 cut(s)	42, 102, 178, 206, 520, 1544, 2150
MspR9I	CCNGG	6 cut(s)	103, 1625, 2150, 2151, 2168, 2279
Mva1269I	GAATGC	1 cut(s)	1756
MvaI	CCWGG	3 cut(s)	1625, 2168, 2279
MvnI	CGCG	1 cut(s)	1612
MwoI	GCNNNNNNNGC	4 cut(s)	463, 542, 1084, 1133
NciI	CCSGG	3 cut(s)	103, 2150, 2151
NcoI	CCATGG	1 cut(s)	1487
NdeI	CATATG	1 cut(s)	1342
NdeII	GATC	8 cut(s)	31, 555, 900, 1153, 1711, 2093, 2159, 2357
NlaIV	GGNNCC	5 cut(s)	1411, 1713, 1801, 2132, 2161
NmeAIII	GCCGAG	2 cut(s)	778, 1318
NmuCI	GTSAC	2 cut(s)	366, 1306
NruI	TCGCGA	1 cut(s)	1612
NspI	RCATGY	4 cut(s)	484, 1426, 2374, 2439
NspV	TTCGAA	1 cut(s)	347
OliI	CACNNNNGTG	2 cut(s)	1313, 2313
PaeI	GCATGC	2 cut(s)	1426, 2439
PagI	TCATGA	1 cut(s)	613
PceI	AGGCCT	1 cut(s)	2277
PciI	ACATGT	1 cut(s)	2370
PciSI	GCTCTTC	1 cut(s)	1412
PcsI	WCGNNNNNNNCGW	1 cut(s)	155
PctI	GAATGC	1 cut(s)	1756
PdmI	GAANNNNTTC	1 cut(s)	741
PflMI	CCANNNNNTGG	1 cut(s)	1630
PfoI	TCCNGGA	1 cut(s)	1623
PkrI	GCNGC	7 cut(s)	204, 456, 547, 636, 1086, 1966, 2224
PleI	GAGTC	2 cut(s)	257, 715
PpsI	GAGTC	2 cut(s)	257, 715
PscI	ACATGT	1 cut(s)	2370
Psp6I	CCWGG	3 cut(s)	1623, 2166, 2277
PspFI	CCCAGC	1 cut(s)	1668
PspGI	CCWGG	3 cut(s)	1623, 2166, 2277
PspN4I	GGNNCC	5 cut(s)	1411, 1713, 1801, 2132, 2161
PspPI	GGNCC	4 cut(s)	175, 766, 1409, 2185
PstNI	CAGNNNCTG	4 cut(s)	376, 1078, 1385, 2222
PsuI	RGATCY	7 cut(s)	31, 555, 1153, 1711, 2093, 2159, 2357
PvuII	CAGCTG	2 cut(s)	202, 1508
RruI	TCGCGA	1 cut(s)	1612
RsaI	GTAC	4 cut(s)	1119, 1349, 1588, 2471
RsaNI	GTAC	4 cut(s)	1118, 1348, 1587, 2470
RseI	CAYNNNNRTG	6 cut(s)	1313, 1805, 2139, 2303, 2313, 2501
SapI	GCTCTTC	1 cut(s)	1412
SatI	GCNGC	7 cut(s)	203, 455, 546, 635, 1085, 1965, 2223
Sau3AI	GATC	8 cut(s)	31, 555, 900, 1153, 1711, 2093, 2159, 2357
Sau96I	GGNCC	4 cut(s)	175, 766, 1409, 2185
ScaI	AGTACT	1 cut(s)	2471
SchI	GAGTC	2 cut(s)	257, 715
ScrFI	CCNGG	6 cut(s)	103, 1625, 2150, 2151, 2168, 2279
SfaNI	GCATC	7 cut(s)	1065, 1385, 1729, 1797, 2131, 2295, 2493
SfuI	TTCGAA	1 cut(s)	347
SinI	GGWCC	4 cut(s)	175, 766, 1409, 2185
SmaI	CCCGGG	1 cut(s)	2151
SmiMI	CAYNNNNRTG	6 cut(s)	1313, 1805, 2139, 2303, 2313, 2501
SmlI	CTYRAG	3 cut(s)	646, 746, 1157
SmoI	CTYRAG	3 cut(s)	646, 746, 1157
SphI	GCATGC	2 cut(s)	1426, 2439
SseBI	AGGCCT	1 cut(s)	2277
SsiI	CCGC	1 cut(s)	2537
SspMI	CTAG	4 cut(s)	35, 1137, 2192, 2457
StuI	AGGCCT	1 cut(s)	2277
StyD4I	CCNGG	6 cut(s)	101, 1623, 2148, 2149, 2166, 2277
StyI	CCWWGG	2 cut(s)	1487, 2109
TaiI	ACGT	2 cut(s)	1643, 1666
TaqI	TCGA	6 cut(s)	164, 347, 516, 823, 2137, 2303
TatI	WGTACW	3 cut(s)	1347, 1586, 2469
TscAI	CASTG	8 cut(s)	145, 945, 1315, 1411, 1713, 1894, 1909, 2092
TseFI	GTSAC	2 cut(s)	366, 1306
TseI	GCWGC	7 cut(s)	202, 454, 545, 634, 1084, 1964, 2222
Tsp45I	GTSAC	2 cut(s)	366, 1306
TspGWI	ACGGA	1 cut(s)	147
TspMI	CCCGGG	1 cut(s)	2149
TspRI	CASTG	8 cut(s)	145, 945, 1315, 1411, 1713, 1894, 1909, 2092
Van91I	CCANNNNNTGG	1 cut(s)	1630
Vha464I	CTTAAG	1 cut(s)	746
VpaK11BI	GGWCC	4 cut(s)	175, 766, 1409, 2185
XagI	CCTNNNNNAGG	1 cut(s)	646
XapI	RAATTY	3 cut(s)	711, 760, 2013
XbaI	TCTAGA	1 cut(s)	2191
XceI	RCATGY	4 cut(s)	484, 1426, 2374, 2439
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2473
XmaI	CCCGGG	1 cut(s)	2149
XmiI	GTMKAC	3 cut(s)	17, 223, 2075
XmnI	GAANNNNTTC	1 cut(s)	741
XspI	CTAG	4 cut(s)	35, 1137, 2192, 2457
ZrmI	AGTACT	1 cut(s)	2471

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.