AT2G32970

No description available

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
13991317 .. 13995905
4589 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G32970.2

Sequence Viewer

Length: 1734 bp
ATGAAGAAGCTTAAGCAGTGGTTCTCATTGATAGATGCGACAACTTTTTCGAATAAGAAATTACCTGCAAAGAAACTGCAGAGCTCTTTGTATCTGAAAAAGCAACTGCACAAGACCTTGTATGGTTTCATCGTGTTTGAGATTGAATGGGCTAATGTGAGGGGTATCAACTACTTAAATGAGCTACAGACAGACACATCTCTTGCTATAGAAGCTAAGTTGATGCGAAGGTGGGAGTTTGAGAGTATCGATCAAGCTGTGAAAAGCATGTCTCAGTGGTTCTCTGGATCAAAAGCTGAAAAGTCTTGCTTGAGGGAATATCTCGACTCAACTATAGGAGAGGTTTTTCATGACACTGAAATGGAATTCTCAAAAACTACTCTCTCTGATGACGATGACAATCTTTCTGTTGAAAATGATTCTCCTTGCTGCTCCAGAAGTGTCTTCAACGTTAATCATTCTGCTGCAAATTATGATGAAAACGAGCCTCACACACCGCCTCTGACTGGACCGTACAAGAGAAGAAGAGTAACTAAGGCAATCAGCACCGGAGTTGAAGTTGACTATATGGAGGAAACACCCAGAAGAAAAGATAACTCGGTAGACCACTGGGAAAGCCATGTACCTGATTGTGACAACATCATTGAAGCAACCCAGTATAAGGATGTACTAGTTCTTGTTAGGTGTGGTGACCGTGATCTCCCTTTCAAGTTGCGAGAGGTTATAATGGCTGACATACGATTGCTTACTTTACTTGAAGCTGGTCTCCCTTCATGGGTCTTGTTTCTGCAGTCTTATCCCGGTTTCTGTCATCTTTATCGACCCTGGATGTGCCATTTCGCCAGAGCATTATATGTGATGATATCTGTCATCACTGTTGTGATTGGTTTTTATGACCTGTACAAAAATGTCCCTGTTCTGAAGGCTACTGCATCTCGGTTATGTGGGCCACTGTTCGATTGGGTTGAAACATGGGACATGGTATCCCGAATAAAGTACTTGGGAACGATGTTGTTTCTTCACAACTTCCAGAAAGCTGTCAAGTGGGCTCTGACTATGGCACGTGCTATGCAGTCATTTGTTTCTTTTTGCATAATGCCTCTGGTAAATCCTCTCTTAGACATTCTTGAATTGCTCCTACCGTTATGGAATTCGTTGGCGGAAACAGTGGCAAGCTTGGTTTCAGTGGTTTGGATAGTGATGGAGTCTGGTTGCAATCTTGTTGGTGATGTGGTAGAGTTGGTGCTTTTGCCCATCTCGCTAGTTTGGAACGTCACAAATACTGTTTTACTACCTCTATTCTGGATCATATGGGAAGTGGTATATGCACCGATCAGAGTGGTTGCTGCATTGGCCAATTGTTTAGCTGTTTCCTTCTCATACATATTCGATGTTATTGGAGATTTATGGAGGTATATGAGCAGTATACTTCAGCTTGCATCAGATTCTCAAGCAGCTGTGAAGACTTATGAAGTCTCCATGTGGCGTACACTTTGGAACGATCTCTTTTCTCATGTTTTTCGTGCTGTCAGGAGCATATTGAACGGTTTTGTAGCATTTTTTGCTGCCTGTAACAGACATCGGCTTAGTACATATAATCACATACAAGAGTTTATGGAGAGAGTACATGGACGAACCACGAGACCAGAATCTATAGACTCAAGACATGGCAAGTCTGTTAAGAACAATCAACGTACAGGAGACGAAACGAGAAGGAAATTGCACCTTGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

577

Amino Acids

66.47

Weight (kDa)

6.94

Isoelectric Point (pI)

46.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 725
Acc36I ACCTGC 1 cut(s) 73
AccI GTMKAC 2 cut(s) 603, 1426
AciI CCGC 2 cut(s) 497, 1160
AclI AACGTT 1 cut(s) 450
AclWI GGATC 2 cut(s) 295, 1313
AcoI YGGCCR 1 cut(s) 1353
AcsI RAATTY 2 cut(s) 365, 1150
AcuI CTGAAG 2 cut(s) 941, 1415
AcvI CACGTG 1 cut(s) 1064
AfaI GTAC 9 cut(s) 515, 624, 669, 902, 998, 1489, 1591, 1626, 1696
AfiI CCNNNNNNNGG 3 cut(s) 506, 661, 775
AflII CTTAAG 1 cut(s) 11
AhlI ACTAGT 1 cut(s) 670
AjnI CCWGG 1 cut(s) 824
AleI CACNNNNGTG 1 cut(s) 878
Alw21I GWGCWC 1 cut(s) 86
Alw26I GTCTC 5 cut(s) 276, 770, 1480, 1636, 1695
AlwI GGATC 2 cut(s) 295, 1313
AoxI GGCC 2 cut(s) 947, 1353
ApeKI GCWGC 5 cut(s) 429, 464, 1346, 1454, 1565
ApoI RAATTY 2 cut(s) 365, 1150
ArsI GACNNNNNNTTYG 2 cut(s) 31, 63
AspS9I GGNCC 2 cut(s) 509, 947
AsuC2I CCSGG 1 cut(s) 801
AsuHPI GGTGA 2 cut(s) 701, 1238
AsuII TTCGAA 1 cut(s) 50
AvaII GGWCC 1 cut(s) 509
BalI TGGCCA 1 cut(s) 1355
BanII GRGCYC 2 cut(s) 86, 1051
BauI CACGAG 1 cut(s) 1639
BbrPI CACGTG 1 cut(s) 1064
BbsI GAAGAC 2 cut(s) 436, 1469
Bbv12I GWGCWC 1 cut(s) 86
BbvI GCAGC 5 cut(s) 416, 451, 1333, 1466, 1552
BccI CCATC 2 cut(s) 1195, 1262
BciT130I CCWGG 1 cut(s) 826
BciVI GTATCC 1 cut(s) 994
BcnI CCSGG 1 cut(s) 801
BcoDI GTCTC 5 cut(s) 276, 770, 1480, 1636, 1695
BcuI ACTAGT 1 cut(s) 670
BfaI CTAG 2 cut(s) 671, 1262
BfmI CTRYAG 6 cut(s) 77, 185, 207, 333, 788, 1653
BfrI CTTAAG 1 cut(s) 11
BfuAI ACCTGC 1 cut(s) 73
BfuI GTATCC 1 cut(s) 994
BisI GCNGC 5 cut(s) 430, 465, 1347, 1455, 1566
BlsI GCNGC 5 cut(s) 431, 466, 1348, 1456, 1567
BmcAI AGTACT 1 cut(s) 998
Bme1390I CCNGG 2 cut(s) 801, 826
Bme18I GGWCC 1 cut(s) 509
BmgT120I GGNCC 2 cut(s) 509, 947
BmrFI CCNGG 2 cut(s) 801, 826
BmrI ACTGGG 2 cut(s) 619, 649
BmsI GCATC 4 cut(s) 25, 213, 941, 1448
BmuI ACTGGG 2 cut(s) 619, 649
BpiI GAAGAC 2 cut(s) 436, 1469
BpmI CTGGAG 1 cut(s) 418
Bpu14I TTCGAA 1 cut(s) 50
BpuEI CTTGAG 3 cut(s) 331, 1434, 1645
BpuMI CCSGG 1 cut(s) 801
Bsa29I ATCGAT 1 cut(s) 249
BsaAI YACGTR 1 cut(s) 1064
BsaBI GATNNNNATC 1 cut(s) 399
BsaI GGTCTC 2 cut(s) 770, 1636
BsaJI CCNNGG 1 cut(s) 824
BsaWI WCCGGW 1 cut(s) 548
BsaXI ACNNNNNCTCC 2 cut(s) 543, 573
Bsc4I CCNNNNNNNGG 3 cut(s) 506, 661, 775
Bse1I ACTGG 3 cut(s) 511, 614, 655
Bse8I GATNNNNATC 1 cut(s) 399
BseBI CCWGG 1 cut(s) 826
BseCI ATCGAT 1 cut(s) 249
BseDI CCNNGG 1 cut(s) 824
BseGI GGATG 2 cut(s) 670, 834
BseJI GATNNNNATC 1 cut(s) 399
BseLI CCNNNNNNNGG 3 cut(s) 506, 661, 775
BseMII CTCAG 1 cut(s) 287
BseNI ACTGG 3 cut(s) 511, 614, 655
BseXI GCAGC 5 cut(s) 416, 451, 1333, 1466, 1552
BsgI GTGCAG 1 cut(s) 92
BshFI GGCC 2 cut(s) 949, 1355
BshVI ATCGAT 1 cut(s) 249
BsiHKAI GWGCWC 1 cut(s) 86
BsiSI CCGG 2 cut(s) 549, 801
BslFI GGGAC 2 cut(s) 896, 989
BslI CCNNNNNNNGG 3 cut(s) 506, 661, 775
BsmAI GTCTC 5 cut(s) 276, 770, 1480, 1636, 1695
BsmBI CGTCTC 1 cut(s) 1695
BsmFI GGGAC 2 cut(s) 896, 989
BsnI GGCC 2 cut(s) 949, 1355
Bso31I GGTCTC 2 cut(s) 770, 1636
Bsp119I TTCGAA 1 cut(s) 50
Bsp1286I GDGCHC 2 cut(s) 86, 1051
Bsp1407I TGTACA 1 cut(s) 900
Bsp143I GATC 6 cut(s) 250, 287, 697, 1305, 1332, 1501
BspACI CCGC 2 cut(s) 497, 1160
BspANI GGCC 2 cut(s) 949, 1355
BspCNI CTCAG 1 cut(s) 286
BspDI ATCGAT 1 cut(s) 249
BspHI TCATGA 1 cut(s) 349
BspMAI CTGCAG 2 cut(s) 81, 792
BspMI ACCTGC 1 cut(s) 73
BspPI GGATC 2 cut(s) 295, 1313
BspT104I TTCGAA 1 cut(s) 50
BspTI CTTAAG 1 cut(s) 11
BspTNI GGTCTC 2 cut(s) 770, 1636
BsrGI TGTACA 1 cut(s) 900
BsrI ACTGG 3 cut(s) 511, 614, 655
BssECI CCNNGG 1 cut(s) 824
BssMI GATC 6 cut(s) 250, 287, 697, 1305, 1332, 1501
BssNAI GTATAC 1 cut(s) 1427
BssSI CACGAG 1 cut(s) 1639
Bst1107I GTATAC 1 cut(s) 1427
Bst2BI CACGAG 1 cut(s) 1639
Bst2UI CCWGG 1 cut(s) 826
Bst4CI ACNGT 8 cut(s) 513, 695, 877, 954, 1143, 1168, 1285, 1547
Bst6I CTCTTC 1 cut(s) 520
BstAFI CTTAAG 1 cut(s) 11
BstAPI GCANNNNNTGC 1 cut(s) 1562
BstAUI TGTACA 1 cut(s) 900
BstBAI YACGTR 1 cut(s) 1064
BstBI TTCGAA 1 cut(s) 50
BstC8I GCNNGC 2 cut(s) 1174, 1437
BstDEI CTNAG 5 cut(s) 216, 273, 534, 1117, 1586
BstEII GGTNACC 1 cut(s) 689
BstF5I GGATG 2 cut(s) 670, 834
BstKTI GATC 6 cut(s) 253, 290, 700, 1308, 1335, 1504
BstMAI GTCTC 5 cut(s) 276, 770, 1480, 1636, 1695
BstMBI GATC 6 cut(s) 250, 287, 697, 1305, 1332, 1501
BstMWI GCNNNNNNNGC 4 cut(s) 212, 1258, 1352, 1562
BstNI CCWGG 1 cut(s) 826
BstNSI RCATGY 1 cut(s) 271
BstPI GGTNACC 1 cut(s) 689
BstSCI CCNGG 2 cut(s) 799, 824
BstSFI CTRYAG 6 cut(s) 77, 185, 207, 333, 788, 1653
BstV1I GCAGC 5 cut(s) 416, 451, 1333, 1466, 1552
BstV2I GAAGAC 2 cut(s) 436, 1469
BstZ17I GTATAC 1 cut(s) 1427
Bsu15I ATCGAT 1 cut(s) 249
BsuI GTATCC 1 cut(s) 994
BsuRI GGCC 2 cut(s) 949, 1355
BsuTUI ATCGAT 1 cut(s) 249
BtsCI GGATG 2 cut(s) 670, 834
BtsI GCAGTG 1 cut(s) 23
BtsIMutI CAGTG 8 cut(s) 23, 281, 354, 607, 873, 950, 1173, 1191
BveI ACCTGC 1 cut(s) 73
Cac8I GCNNGC 2 cut(s) 1174, 1437
CciI TCATGA 1 cut(s) 349
Cfr13I GGNCC 2 cut(s) 509, 947
ClaI ATCGAT 1 cut(s) 249
Csp6I GTAC 9 cut(s) 514, 623, 668, 901, 997, 1488, 1590, 1625, 1695
CviQI GTAC 9 cut(s) 514, 623, 668, 901, 997, 1488, 1590, 1625, 1695
DdeI CTNAG 5 cut(s) 216, 273, 534, 1117, 1586
DpnI GATC 6 cut(s) 252, 289, 699, 1307, 1334, 1503
DpnII GATC 6 cut(s) 250, 287, 697, 1305, 1332, 1501
EaeI YGGCCR 1 cut(s) 1353
Eam1104I CTCTTC 1 cut(s) 520
EarI CTCTTC 1 cut(s) 520
EciI GGCGGA 1 cut(s) 1175
Ecl136II GAGCTC 1 cut(s) 84
Eco24I GRGCYC 2 cut(s) 86, 1051
Eco31I GGTCTC 2 cut(s) 770, 1636
Eco32I GATATC 1 cut(s) 864
Eco47I GGWCC 1 cut(s) 509
Eco53kI GAGCTC 1 cut(s) 84
Eco57I CTGAAG 2 cut(s) 941, 1415
Eco72I CACGTG 1 cut(s) 1064
Eco91I GGTNACC 1 cut(s) 689
EcoICRI GAGCTC 1 cut(s) 84
EcoO65I GGTNACC 1 cut(s) 689
EcoRI GAATTC 2 cut(s) 365, 1150
EcoRII CCWGG 1 cut(s) 824
EcoRV GATATC 1 cut(s) 864
EcoT38I GRGCYC 2 cut(s) 86, 1051
Esp3I CGTCTC 1 cut(s) 1695
FalI AAGNNNNNCTT 2 cut(s) 293, 325
FaqI GGGAC 2 cut(s) 896, 989
FauNDI CATATG 1 cut(s) 1310
FblI GTMKAC 2 cut(s) 603, 1426
Fnu4HI GCNGC 5 cut(s) 430, 465, 1347, 1455, 1566
FokI GGATG 2 cut(s) 677, 841
FriOI GRGCYC 2 cut(s) 86, 1051
Fsp4HI GCNGC 5 cut(s) 430, 465, 1347, 1455, 1566
FspBI CTAG 2 cut(s) 671, 1262
GluI GCNGC 5 cut(s) 430, 465, 1347, 1455, 1566
GsuI CTGGAG 1 cut(s) 418
HaeIII GGCC 2 cut(s) 949, 1355
HapII CCGG 2 cut(s) 549, 801
HincII GTYRAC 1 cut(s) 562
HindII GTYRAC 1 cut(s) 562
HindIII AAGCTT 2 cut(s) 8, 1174
HinfI GANTC 6 cut(s) 326, 419, 1205, 1445, 1649, 1658
HpaII CCGG 2 cut(s) 549, 801
HphI GGTGA 2 cut(s) 701, 1238
Hpy166II GTNNAC 4 cut(s) 562, 604, 1427, 1490
Hpy188I TCNGA 7 cut(s) 96, 388, 504, 921, 1053, 1337, 1444
Hpy8I GTNNAC 4 cut(s) 562, 604, 1427, 1490
HpyAV CCTTC 5 cut(s) 222, 780, 916, 1384, 1707
HpyCH4III ACNGT 8 cut(s) 513, 695, 877, 954, 1143, 1168, 1285, 1547
HpyCH4IV ACGT 4 cut(s) 450, 1063, 1272, 1693
HpyF10VI GCNNNNNNNGC 4 cut(s) 212, 1258, 1352, 1562
HpyF3I CTNAG 5 cut(s) 216, 273, 534, 1117, 1586
HpySE526I ACGT 4 cut(s) 450, 1063, 1272, 1693
Kzo9I GATC 6 cut(s) 250, 287, 697, 1305, 1332, 1501
LmnI GCTCC 3 cut(s) 437, 1140, 1533
Lsp1109I GCAGC 5 cut(s) 416, 451, 1333, 1466, 1552
LweI GCATC 4 cut(s) 25, 213, 941, 1448
MaeI CTAG 2 cut(s) 671, 1262
MaeII ACGT 4 cut(s) 450, 1063, 1272, 1693
MaeIII GTNAC 5 cut(s) 529, 632, 689, 1273, 1571
MalI GATC 6 cut(s) 252, 289, 699, 1307, 1334, 1503
MboI GATC 6 cut(s) 250, 287, 697, 1305, 1332, 1501
MboII GAAGA 7 cut(s) 16, 436, 534, 537, 597, 1010, 1474
MfeI CAATTG 1 cut(s) 1357
MhlI GDGCHC 2 cut(s) 86, 1051
MlsI TGGCCA 1 cut(s) 1355
MluCI AATT 7 cut(s) 59, 365, 469, 1130, 1150, 1357, 1718
MluNI TGGCCA 1 cut(s) 1355
MlyI GAGTC 3 cut(s) 320, 1214, 1652
Mox20I TGGCCA 1 cut(s) 1355
MscI TGGCCA 1 cut(s) 1355
MseI TTAA 4 cut(s) 12, 176, 453, 1680
MslI CAYNNNNRTG 2 cut(s) 359, 878
Msp20I TGGCCA 1 cut(s) 1355
MspA1I CMGCKG 1 cut(s) 1457
MspCI CTTAAG 1 cut(s) 11
MspI CCGG 2 cut(s) 549, 801
MspR9I CCNGG 2 cut(s) 801, 826
MunI CAATTG 1 cut(s) 1357
MvaI CCWGG 1 cut(s) 826
MwoI GCNNNNNNNGC 4 cut(s) 212, 1258, 1352, 1562
NciI CCSGG 1 cut(s) 801
NdeI CATATG 1 cut(s) 1310
NdeII GATC 6 cut(s) 250, 287, 697, 1305, 1332, 1501
NmuCI GTSAC 3 cut(s) 632, 689, 1273
NspI RCATGY 1 cut(s) 271
NspV TTCGAA 1 cut(s) 50
OliI CACNNNNGTG 1 cut(s) 878
PagI TCATGA 1 cut(s) 349
PfeI GAWTC 3 cut(s) 419, 1445, 1649
PkrI GCNGC 5 cut(s) 431, 466, 1348, 1456, 1567
PleI GAGTC 3 cut(s) 320, 1213, 1652
PmaCI CACGTG 1 cut(s) 1064
PmlI CACGTG 1 cut(s) 1064
PpsI GAGTC 3 cut(s) 320, 1213, 1652
Ppu21I YACGTR 1 cut(s) 1064
PsiI TTATAA 1 cut(s) 725
Psp124BI GAGCTC 1 cut(s) 86
Psp1406I AACGTT 1 cut(s) 450
Psp6I CCWGG 1 cut(s) 824
PspCI CACGTG 1 cut(s) 1064
PspEI GGTNACC 1 cut(s) 689
PspGI CCWGG 1 cut(s) 824
PspPI GGNCC 2 cut(s) 509, 947
PstI CTGCAG 2 cut(s) 81, 792
PvuII CAGCTG 1 cut(s) 1457
RsaI GTAC 9 cut(s) 515, 624, 669, 902, 998, 1489, 1591, 1626, 1696
RsaNI GTAC 9 cut(s) 514, 623, 668, 901, 997, 1488, 1590, 1625, 1695
RseI CAYNNNNRTG 2 cut(s) 359, 878
SacI GAGCTC 1 cut(s) 86
SaqAI TTAA 4 cut(s) 12, 176, 453, 1680
SatI GCNGC 5 cut(s) 430, 465, 1347, 1455, 1566
Sau3AI GATC 6 cut(s) 250, 287, 697, 1305, 1332, 1501
Sau96I GGNCC 2 cut(s) 509, 947
ScaI AGTACT 1 cut(s) 998
SchI GAGTC 3 cut(s) 320, 1214, 1652
ScrFI CCNGG 2 cut(s) 801, 826
SduI GDGCHC 2 cut(s) 86, 1051
SfaNI GCATC 4 cut(s) 25, 213, 941, 1448
SfcI CTRYAG 6 cut(s) 77, 185, 207, 333, 788, 1653
SfuI TTCGAA 1 cut(s) 50
SinI GGWCC 1 cut(s) 509
SmiMI CAYNNNNRTG 2 cut(s) 359, 878
SmlI CTYRAG 4 cut(s) 11, 310, 1449, 1660
SmoI CTYRAG 4 cut(s) 11, 310, 1449, 1660
SpeI ACTAGT 1 cut(s) 670
Sse9I AATT 7 cut(s) 59, 365, 469, 1130, 1150, 1357, 1718
SsiI CCGC 2 cut(s) 497, 1160
SspMI CTAG 2 cut(s) 671, 1262
SstI GAGCTC 1 cut(s) 86
StyD4I CCNGG 2 cut(s) 799, 824
TaaI ACNGT 8 cut(s) 513, 695, 877, 954, 1143, 1168, 1285, 1547
TaiI ACGT 4 cut(s) 453, 1066, 1275, 1696
TaqI TCGA 6 cut(s) 50, 249, 324, 820, 957, 1389
TasI AATT 7 cut(s) 59, 365, 469, 1130, 1150, 1357, 1718
TatI WGTACW 5 cut(s) 667, 900, 996, 1589, 1624
TfiI GAWTC 3 cut(s) 419, 1445, 1649
Tru1I TTAA 4 cut(s) 12, 176, 453, 1680
Tru9I TTAA 4 cut(s) 12, 176, 453, 1680
TscAI CASTG 8 cut(s) 23, 281, 361, 614, 880, 957, 1173, 1191
TseFI GTSAC 3 cut(s) 632, 689, 1273
TseI GCWGC 5 cut(s) 429, 464, 1346, 1454, 1565
Tsp45I GTSAC 3 cut(s) 632, 689, 1273
TspDTI ATGAA 6 cut(s) 17, 118, 338, 492, 762, 1485
TspRI CASTG 8 cut(s) 23, 281, 361, 614, 880, 957, 1173, 1191
Vha464I CTTAAG 1 cut(s) 11
VpaK11BI GGWCC 1 cut(s) 509
XapI RAATTY 2 cut(s) 365, 1150
XceI RCATGY 1 cut(s) 271
XcmI CCANNNNNNNNNTGG 1 cut(s) 957
XmiI GTMKAC 2 cut(s) 603, 1426
XspI CTAG 2 cut(s) 671, 1262
ZrmI AGTACT 1 cut(s) 998
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.