Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0005838

Physical Location & Seq

Genomic Coordinates Forward (+)

8636305 .. 8641571

Gene Structure 5267 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1113700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2253 bp

ATGAATTTGATGAAGAAAGGTGACGGTGGCCGCTGCATTTTCCCCCTCACCGGTTTGCAAATTGGAGATTTGCAGTCTTACCTTTCGGATCTTAGCCTTTTCCTGGCCCTCGAGAGCAAGAAATTCTATATCTTGGTGGACAATCGGCCATGGCTGGGCGACCTAGGTTCGCGGTCAGCGCACTTGTGGCAATTGATGGTTACCAAGTCAAGGTTGTCTCCTTTTGCAAACACTAAAGTACGGAAGGTGAGAACGGAAGGAAATGATGCTTGCTCTAGACCTAAGCCTGCAAAACCAAAGAAGCTTGCTAGGTGGTTCTCATTAATCAAGCATCAGAAGAAGGTGTTGTTACCTGTAAAGAAGCTGCGGAGTTCTTTACTTTTAAGCAGGGAGTTGCATAGGACCTTGTATGGTTTTATTGTATTTGAAGTTGCATGGAGCAATGTCCGAGGTATCAATTACATCAATGAGCTTCAGACTGATACATCGCTGGCTATAGAGGCTAAAGTCATGCAAAGATGGGAATTTGACAGTATTGCTCAAGCTGCAAGCTGCATATCGTCATGGTTCTCAGGAACAGTCTCTGAGCAGCTACAGTTGAAAGAACTTCTGAATTCTGCCATAGGAGAAGTTTTCTATGATGCTGAAGAGTATCCAGAGACAGAAACTATGGCCGTTGTTGATGAAAATATCTCCTACAACAATCTAACGTCTGAGGAAGATTCTCTCCACTGCTTCAGTCACAATTTTAGTGTTCATTCTGACACCTGTGAAAATAGGGCCGCTGTACCACATTCACCACCTCCACCTACTGGACCCTATAAGAGAAGGAAAATAACCACGTGCAGTAGTGGTGGAGTTGAAGTAGATGCTTATTCTGAGGAAACGCAAAGCCCTGCCAGTGACTCTGAAAATTCCGAGATGTACAAATGTTACTGTGAAGATGAAATGCAAAATTCTGAGACGTATTCCTGTTACTGTGGAGATGAAATGCAAAACTCTGAGATGTATACCTGTGACTCTGAAGATGATATACCGGTTACCGCGAGGGCCTATATCAGTGACTCTGAAGATAGCGTTAAAGCTACTCTGTTCAGCAAAGATGCTATACCTGTAACTGTCAATACCTATACTAGTGAATGTCTAGATGCTGTTGGATCTACACAGTACAGGGATGTGCTGATTTTGTTCAGGTTCAATGATCGTGACCTCCCATTTAAACTTAGAGAAATAATAATGTCTGATCTCCGGTTACTGACTTTGCTTGAGGCTGGGCTTCCATCTTGGGTTATCTTCCTTCAGTCATACCCAGGGTTTTGCCATATCTATCGCCCGTGGATGTGCCCTCTTGCAAGAGCATTGTATGTGCTGATCTCAGTTGTCACTGTTCTAATTGGATTTTTTGACCTATACAAAAATGTTCCAGTTCTGAAGGTAACTGCATCTCGTCTTTGTGGACCTCTATTTGATTGGATAGAGACCTGGTCGATGATATCAAGGATTAAGTACTTGGGAACAATGCTATTTCTACACCACTCTCAGAAAGCTGTTCAGTGCTTTCTGGCGATCAAGAGTACCACTCTCTCCTTTTTTTCAGTACTAGCTCAGCCATTGGCAGAACCTCTTGTGGAGTGTTTTGGATTCCTCCTTCCAGTATGGAACATGCTTGTTGATGTGTTAGAGAACCTCTTTTCAGTCATTTGGATTCTGATTGGATCTGCACGCAGTCTAGTGGGGAACCTGGTACAGGTTTTAGTGTTTCCAATATTATTTCTCCTGTCCACTGTCTGGAGCATTGGAACTTCCATTGTATATCCTATATTTAGGATTCTATGGGAAGCACTCTATGCTCCAGTTCGCATGGTCCTTGCACTAGCCAATGTCATAGCCTTTATTGGTGCATGTATATATGATACGCTTCGAGATATATGGCAAGTTATTAGCAGCATATTCTGGTTTGCTTCAGCCTCTCAGGCAACTGTGAAAACGGTTGAAGTTTCCATATGGCGTTCACTTTGGAATGACCTCTTTTCTCAGGTTTTCCGTGCTGTCAGGAGTATATTAAATGGTTTTGCTGCATTCTTCATAGCTTGTAACAGGCATCGCCTTAGCATTTACAATCATATGCAAAAGTTTATCCAAAGAATCCTGGATCGAACCCGGAGATCATGGCGTGAAGTTTCAAGACGTTATAGGCCCACCGGAGAGACTCGGAATATGTTTGAAGTAACAAGGAAAATCAACATTGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

751

Amino Acids

85.71

Weight (kDa)

7.13

Isoelectric Point (pI)

50.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005838)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32970 AT2G32970 AT2G32970 AT2G32970
fragaria_vesca	FvH4_6g42290 FvH4_6g42290 FvH4_6g42290 FvH4_6g42290 FvH4_6g42290 FvH4_6g42290
malus_domestica	MD09G1113700.v1.1 MD17G1103800.v1.1
prunus_persica	Prupe.3G210900_v2.0.a1 Prupe.3G210900_v2.0.a1 Prupe.3G210900_v2.0.a1 Prupe.3G210900_v2.0.a1
pyrus_communis	pycom17g09790
rosa_chinensis	RchiOBHm_Chr2g0158131
rosa_laevigata	RLG00000021062
rosa_multiflora	Rmu_sc0005982.1_g000008 Rmu_sc0018610.1_g000001 Rmu_sc0032555.1_g000002
rosa_roxburghii	Rroxscaffold_2G00091640
rosa_samantha	Rh2AG532300 Rh2BG546400 Rh2CG516200 Rh2DG554900
rosa_wichuraiana	Rw2G044010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	812, 1788
AccI	GTMKAC	1 cut(s)	1010
AccII	CGCG	2 cut(s)	172, 1046
AciI	CCGC	5 cut(s)	31, 172, 367, 783, 1044
AclWI	GGATC	4 cut(s)	96, 1165, 1723, 2160
AcoI	YGGCCR	3 cut(s)	28, 146, 672
AcsI	RAATTY	6 cut(s)	4, 122, 524, 613, 913, 955
AcuI	CTGAAG	8 cut(s)	458, 666, 721, 1044, 1089, 1283, 1451, 1947
AcvI	CACGTG	1 cut(s)	843
AfaI	GTAC	8 cut(s)	240, 789, 926, 1169, 1508, 1576, 1599, 1746
AfiI	CCNNNNNNNGG	7 cut(s)	50, 103, 155, 210, 812, 1747, 1788
AgeI	ACCGGT	2 cut(s)	50, 1036
AgsI	TTSAA	8 cut(s)	428, 601, 863, 1198, 1994, 2184, 2225, 2249
AhlI	ACTAGT	1 cut(s)	1133
AjnI	CCWGG	5 cut(s)	102, 1309, 1481, 1740, 2148
Alw26I	GTCTC	6 cut(s)	222, 586, 653, 956, 1472, 2201
AlwI	GGATC	4 cut(s)	96, 1165, 1723, 2160
AlwNI	CAGNNNCTG	1 cut(s)	584
Ama87I	CYCGRG	1 cut(s)	110
AoxI	GGCC	7 cut(s)	28, 105, 146, 672, 780, 1050, 2195
ApeKI	GCWGC	7 cut(s)	33, 364, 545, 552, 589, 1944, 2075
ApoI	RAATTY	6 cut(s)	4, 122, 524, 613, 913, 955
AseI	ATTAAT	1 cut(s)	323
AsiGI	ACCGGT	2 cut(s)	50, 1036
AspA2I	CCTAGG	1 cut(s)	163
AspLEI	GCGC	1 cut(s)	181
AspS9I	GGNCC	8 cut(s)	106, 402, 780, 815, 1050, 1457, 1864, 2196
AsuC2I	CCSGG	1 cut(s)	2161
AsuHPI	GGTGA	4 cut(s)	32, 40, 259, 789
AvaI	CYCGRG	1 cut(s)	110
AvaII	GGWCC	4 cut(s)	402, 815, 1457, 1864
AvrII	CCTAGG	1 cut(s)	163
BaeGI	GKGCMC	1 cut(s)	1346
BarI	GAAGNNNNNNTAC	2 cut(s)	1017, 1049
BbrPI	CACGTG	1 cut(s)	843
BbvI	GCAGC	7 cut(s)	20, 351, 532, 539, 601, 1956, 2062
BccI	CCATC	3 cut(s)	190, 513, 1288
BceAI	ACGGC	1 cut(s)	659
BciT130I	CCWGG	5 cut(s)	104, 1311, 1483, 1742, 2150
BciVI	GTATCC	1 cut(s)	663
BcnI	CCSGG	1 cut(s)	2161
BcoDI	GTCTC	6 cut(s)	222, 586, 653, 956, 1472, 2201
BcuI	ACTAGT	1 cut(s)	1133
BfaI	CTAG	8 cut(s)	164, 276, 309, 1134, 1145, 1601, 1730, 1874
BfmI	CTRYAG	2 cut(s)	495, 593
BfuI	GTATCC	1 cut(s)	663
BglI	GCCNNNNNGGC	1 cut(s)	1973
BisI	GCNGC	9 cut(s)	31, 34, 365, 546, 553, 590, 783, 1945, 2076
BlnI	CCTAGG	1 cut(s)	163
BlpI	GCTNAGC	1 cut(s)	1605
BlsI	GCNGC	9 cut(s)	32, 35, 366, 547, 554, 591, 784, 1946, 2077
BmcAI	AGTACT	2 cut(s)	1508, 1599
Bme1390I	CCNGG	6 cut(s)	104, 1311, 1483, 1742, 2150, 2161
Bme18I	GGWCC	4 cut(s)	402, 815, 1457, 1864
BmeT110I	CYCGRG	1 cut(s)	110
BmgT120I	GGNCC	8 cut(s)	106, 402, 780, 815, 1050, 1457, 1864, 2196
BmiI	GGNNCC	2 cut(s)	817, 1739
BmrFI	CCNGG	6 cut(s)	104, 1311, 1483, 1742, 2150, 2161
BmsI	GCATC	8 cut(s)	256, 340, 631, 859, 1093, 1138, 1451, 2110
BplI	GAGNNNNNCTC	2 cut(s)	1564, 1596
BpmI	CTGGAG	2 cut(s)	1810, 1836
Bpu10I	CCTNAGC	2 cut(s)	282, 2108
Bpu1102I	GCTNAGC	1 cut(s)	1605
BpuEI	CTTGAG	2 cut(s)	525, 1286
BpuMI	CCSGG	1 cut(s)	2161
BsaAI	YACGTR	1 cut(s)	843
BsaI	GGTCTC	1 cut(s)	1472
BsaJI	CCNNGG	6 cut(s)	149, 163, 448, 1309, 1310, 1334
BsaWI	WCCGGW	4 cut(s)	50, 1036, 1248, 2201
BsaXI	ACNNNNNCTCC	2 cut(s)	849, 879
Bsc4I	CCNNNNNNNGG	7 cut(s)	50, 103, 155, 210, 812, 1747, 1788
Bse118I	RCCGGY	2 cut(s)	50, 1036
Bse1I	ACTGG	5 cut(s)	817, 900, 1424, 1652, 1853
Bse3DI	GCAATG	1 cut(s)	448
BseBI	CCWGG	5 cut(s)	104, 1311, 1483, 1742, 2150
BseDI	CCNNGG	6 cut(s)	149, 163, 448, 1309, 1310, 1334
BseGI	GGATG	2 cut(s)	1180, 1344
BseLI	CCNNNNNNNGG	7 cut(s)	50, 103, 155, 210, 812, 1747, 1788
BseMI	GCAATG	1 cut(s)	448
BseNI	ACTGG	5 cut(s)	817, 900, 1424, 1652, 1853
BseSI	GKGCMC	1 cut(s)	1346
BseXI	GCAGC	7 cut(s)	20, 351, 532, 539, 601, 1956, 2062
BseYI	CCCAGC	2 cut(s)	154, 1271
BsgI	GTGCAG	2 cut(s)	865, 1704
Bsh1236I	CGCG	2 cut(s)	172, 1046
BshFI	GGCC	7 cut(s)	30, 107, 148, 674, 782, 1052, 2197
BshTI	ACCGGT	2 cut(s)	50, 1036
BsiHKCI	CYCGRG	1 cut(s)	110
BsiSI	CCGG	5 cut(s)	51, 1037, 1249, 2161, 2202
BslI	CCNNNNNNNGG	7 cut(s)	50, 103, 155, 210, 812, 1747, 1788
BsmAI	GTCTC	6 cut(s)	222, 586, 653, 956, 1472, 2201
BsmBI	CGTCTC	1 cut(s)	956
BsmI	GAATGC	1 cut(s)	2078
BsnI	GGCC	7 cut(s)	30, 107, 148, 674, 782, 1052, 2197
Bso31I	GGTCTC	1 cut(s)	1472
BsoBI	CYCGRG	1 cut(s)	110
Bsp1286I	GDGCHC	1 cut(s)	1346
Bsp1407I	TGTACA	1 cut(s)	924
Bsp143I	GATC	9 cut(s)	88, 1157, 1201, 1243, 1371, 1566, 1715, 2152, 2165
Bsp1720I	GCTNAGC	1 cut(s)	1605
Bsp19I	CCATGG	1 cut(s)	149
BspACI	CCGC	5 cut(s)	31, 172, 367, 783, 1044
BspANI	GGCC	7 cut(s)	30, 107, 148, 674, 782, 1052, 2197
BspFNI	CGCG	2 cut(s)	172, 1046
BspLI	GGNNCC	2 cut(s)	817, 1739
BspPI	GGATC	4 cut(s)	96, 1165, 1723, 2160
BspTNI	GGTCTC	1 cut(s)	1472
BsrDI	GCAATG	1 cut(s)	448
BsrFI	RCCGGY	2 cut(s)	50, 1036
BsrGI	TGTACA	1 cut(s)	924
BsrI	ACTGG	5 cut(s)	817, 900, 1424, 1652, 1853
BssAI	RCCGGY	2 cut(s)	50, 1036
BssECI	CCNNGG	6 cut(s)	149, 163, 448, 1309, 1310, 1334
BssMI	GATC	9 cut(s)	88, 1157, 1201, 1243, 1371, 1566, 1715, 2152, 2165
BssNAI	GTATAC	1 cut(s)	1011
BssT1I	CCWWGG	2 cut(s)	149, 163
Bst1107I	GTATAC	1 cut(s)	1011
Bst2UI	CCWGG	5 cut(s)	104, 1311, 1483, 1742, 2150
Bst6I	CTCTTC	1 cut(s)	642
BstAPI	GCANNNNNTGC	1 cut(s)	1847
BstAUI	TGTACA	1 cut(s)	924
BstBAI	YACGTR	1 cut(s)	843
BstC8I	GCNNGC	6 cut(s)	271, 288, 306, 492, 550, 1723
BstDSI	CCRYGG	2 cut(s)	149, 1334
BstEII	GGTNACC	2 cut(s)	199, 1039
BstENI	CCTNNNNNAGG	1 cut(s)	1745
BstF5I	GGATG	2 cut(s)	1180, 1344
BstFNI	CGCG	2 cut(s)	172, 1046
BstHHI	GCGC	1 cut(s)	181
BstKTI	GATC	9 cut(s)	91, 1160, 1204, 1246, 1374, 1569, 1718, 2155, 2168
BstMAI	GTCTC	6 cut(s)	222, 586, 653, 956, 1472, 2201
BstMBI	GATC	9 cut(s)	88, 1157, 1201, 1243, 1371, 1566, 1715, 2152, 2165
BstMWI	GCNNNNNNNGC	6 cut(s)	178, 187, 500, 545, 1847, 1973
BstNI	CCWGG	5 cut(s)	104, 1311, 1483, 1742, 2150
BstNSI	RCATGY	2 cut(s)	1666, 1905
BstPI	GGTNACC	2 cut(s)	199, 1039
BstSCI	CCNGG	6 cut(s)	102, 1309, 1481, 1740, 2148, 2159
BstSFI	CTRYAG	2 cut(s)	495, 593
BstSLI	GKGCMC	1 cut(s)	1346
BstUI	CGCG	2 cut(s)	172, 1046
BstV1I	GCAGC	7 cut(s)	20, 351, 532, 539, 601, 1956, 2062
BstX2I	RGATCY	3 cut(s)	88, 1157, 1715
BstYI	RGATCY	3 cut(s)	88, 1157, 1715
BstZ17I	GTATAC	1 cut(s)	1011
BsuI	GTATCC	1 cut(s)	663
BsuRI	GGCC	7 cut(s)	30, 107, 148, 674, 782, 1052, 2197
BtgI	CCRYGG	2 cut(s)	149, 1334
BtgZI	GCGATG	2 cut(s)	471, 2087
BtsCI	GGATG	2 cut(s)	1180, 1344
BtsI	GCAGTG	1 cut(s)	730
BtsIMutI	CAGTG	6 cut(s)	730, 907, 1066, 1383, 1559, 1782
Cac8I	GCNNGC	6 cut(s)	271, 288, 306, 492, 550, 1723
CaiI	CAGNNNCTG	1 cut(s)	584
CfoI	GCGC	1 cut(s)	181
Cfr10I	RCCGGY	2 cut(s)	50, 1036
Cfr13I	GGNCC	8 cut(s)	106, 402, 780, 815, 1050, 1457, 1864, 2196
CsiI	ACCWGGT	2 cut(s)	1481, 1740
Csp6I	GTAC	8 cut(s)	239, 788, 925, 1168, 1507, 1575, 1598, 1745
CspAI	ACCGGT	2 cut(s)	50, 1036
CviAII	CATG	8 cut(s)	150, 435, 511, 564, 1663, 1861, 1902, 2169
CviQI	GTAC	8 cut(s)	239, 788, 925, 1168, 1507, 1575, 1598, 1745
DpnI	GATC	9 cut(s)	90, 1159, 1203, 1245, 1373, 1568, 1717, 2154, 2167
DpnII	GATC	9 cut(s)	88, 1157, 1201, 1243, 1371, 1566, 1715, 2152, 2165
DraI	TTTAAA	1 cut(s)	1219
EaeI	YGGCCR	3 cut(s)	28, 146, 672
Eam1104I	CTCTTC	1 cut(s)	642
EarI	CTCTTC	1 cut(s)	642
Eco130I	CCWWGG	2 cut(s)	149, 163
Eco31I	GGTCTC	1 cut(s)	1472
Eco32I	GATATC	1 cut(s)	1494
Eco47I	GGWCC	4 cut(s)	402, 815, 1457, 1864
Eco57I	CTGAAG	8 cut(s)	458, 666, 721, 1044, 1089, 1283, 1451, 1947
Eco72I	CACGTG	1 cut(s)	843
Eco88I	CYCGRG	1 cut(s)	110
Eco91I	GGTNACC	2 cut(s)	199, 1039
EcoNI	CCTNNNNNAGG	1 cut(s)	1745
EcoO109I	RGGNCCY	2 cut(s)	402, 1050
EcoO65I	GGTNACC	2 cut(s)	199, 1039
EcoRI	GAATTC	1 cut(s)	613
EcoRII	CCWGG	5 cut(s)	102, 1309, 1481, 1740, 2148
EcoRV	GATATC	1 cut(s)	1494
EcoT14I	CCWWGG	2 cut(s)	149, 163
ErhI	CCWWGG	2 cut(s)	149, 163
Esp3I	CGTCTC	1 cut(s)	956
FaeI	CATG	8 cut(s)	153, 438, 514, 567, 1666, 1864, 1905, 2172
FatI	CATG	8 cut(s)	149, 434, 510, 563, 1662, 1860, 1901, 2168
FauNDI	CATATG	2 cut(s)	2003, 2124
FblI	GTMKAC	1 cut(s)	1010
Fnu4HI	GCNGC	9 cut(s)	31, 34, 365, 546, 553, 590, 783, 1945, 2076
FokI	GGATG	2 cut(s)	1187, 1351
Fsp4HI	GCNGC	9 cut(s)	31, 34, 365, 546, 553, 590, 783, 1945, 2076
FspBI	CTAG	8 cut(s)	164, 276, 309, 1134, 1145, 1601, 1730, 1874
GlaI	GCGC	1 cut(s)	180
GluI	GCNGC	9 cut(s)	31, 34, 365, 546, 553, 590, 783, 1945, 2076
GsaI	CCCAGC	2 cut(s)	158, 1275
GsuI	CTGGAG	2 cut(s)	1810, 1836
HaeIII	GGCC	7 cut(s)	30, 107, 148, 674, 782, 1052, 2197
HapII	CCGG	5 cut(s)	51, 1037, 1249, 2161, 2202
HhaI	GCGC	1 cut(s)	181
Hin1II	CATG	8 cut(s)	153, 438, 514, 567, 1666, 1864, 1905, 2172
Hin6I	GCGC	1 cut(s)	179
HinP1I	GCGC	1 cut(s)	179
HindIII	AAGCTT	1 cut(s)	302
HinfI	GANTC	9 cut(s)	722, 905, 1019, 1064, 1641, 1705, 1828, 2145, 2209
HpaII	CCGG	5 cut(s)	51, 1037, 1249, 2161, 2202
HphI	GGTGA	4 cut(s)	32, 40, 259, 789
Hpy166II	GTNNAC	5 cut(s)	139, 1011, 1457, 1782, 2012
Hpy8I	GTNNAC	5 cut(s)	139, 1011, 1457, 1782, 2012
HpyAV	CCTTC	7 cut(s)	238, 251, 334, 822, 1307, 1426, 1658
HpyCH4IV	ACGT	4 cut(s)	710, 842, 965, 2188
HpyF10VI	GCNNNNNNNGC	6 cut(s)	178, 187, 500, 545, 1847, 1973
HpySE526I	ACGT	4 cut(s)	710, 842, 965, 2188
Hsp92II	CATG	8 cut(s)	153, 438, 514, 567, 1666, 1864, 1905, 2172
HspAI	GCGC	1 cut(s)	179
Kzo9I	GATC	9 cut(s)	88, 1157, 1201, 1243, 1371, 1566, 1715, 2152, 2165
LmnI	GCTCC	3 cut(s)	438, 1791, 1855
Lsp1109I	GCAGC	7 cut(s)	20, 351, 532, 539, 601, 1956, 2062
LweI	GCATC	8 cut(s)	256, 340, 631, 859, 1093, 1138, 1451, 2110
MabI	ACCWGGT	2 cut(s)	1481, 1740
MaeI	CTAG	8 cut(s)	164, 276, 309, 1134, 1145, 1601, 1730, 1874
MaeII	ACGT	4 cut(s)	710, 842, 965, 2188
MalI	GATC	9 cut(s)	90, 1159, 1203, 1245, 1373, 1568, 1717, 2154, 2167
MboI	GATC	9 cut(s)	88, 1157, 1201, 1243, 1371, 1566, 1715, 2152, 2165
MboII	GAAGA	9 cut(s)	25, 349, 659, 731, 953, 1037, 1082, 1285, 2074
MfeI	CAATTG	1 cut(s)	191
MflI	RGATCY	3 cut(s)	88, 1157, 1715
MhlI	GDGCHC	1 cut(s)	1346
MlyI	GAGTC	4 cut(s)	899, 1013, 1058, 2203
MmeI	TCCRAC	1 cut(s)	1135
MseI	TTAA	6 cut(s)	323, 383, 1080, 1218, 1503, 2063
MspA1I	CMGCKG	2 cut(s)	33, 785
MspI	CCGG	5 cut(s)	51, 1037, 1249, 2161, 2202
MspR9I	CCNGG	6 cut(s)	104, 1311, 1483, 1742, 2150, 2161
MunI	CAATTG	1 cut(s)	191
Mva1269I	GAATGC	1 cut(s)	2078
MvaI	CCWGG	5 cut(s)	104, 1311, 1483, 1742, 2150
MvnI	CGCG	2 cut(s)	172, 1046
MwoI	GCNNNNNNNGC	6 cut(s)	178, 187, 500, 545, 1847, 1973
NciI	CCSGG	1 cut(s)	2161
NcoI	CCATGG	1 cut(s)	149
NdeI	CATATG	2 cut(s)	2003, 2124
NdeII	GATC	9 cut(s)	88, 1157, 1201, 1243, 1371, 1566, 1715, 2152, 2165
NlaIII	CATG	8 cut(s)	153, 438, 514, 567, 1666, 1864, 1905, 2172
NlaIV	GGNNCC	2 cut(s)	817, 1739
NmuCI	GTSAC	7 cut(s)	20, 740, 902, 1016, 1061, 1205, 1381
NspI	RCATGY	2 cut(s)	1666, 1905
PaeR7I	CTCGAG	1 cut(s)	110
PasI	CCCWGGG	1 cut(s)	1310
PctI	GAATGC	1 cut(s)	2078
PfeI	GAWTC	5 cut(s)	722, 1641, 1705, 1828, 2145
PflFI	GACNNNGTC	1 cut(s)	1483
PflMI	CCANNNNNTGG	2 cut(s)	812, 1788
PfoI	TCCNGGA	1 cut(s)	2148
PinAI	ACCGGT	2 cut(s)	50, 1036
PkrI	GCNGC	9 cut(s)	32, 35, 366, 547, 554, 591, 784, 1946, 2077
PleI	GAGTC	4 cut(s)	899, 1013, 1058, 2203
PmaCI	CACGTG	1 cut(s)	843
PmlI	CACGTG	1 cut(s)	843
PpsI	GAGTC	4 cut(s)	899, 1013, 1058, 2203
Ppu21I	YACGTR	1 cut(s)	843
PpuMI	RGGWCCY	1 cut(s)	402
PshBI	ATTAAT	1 cut(s)	323
Psp5II	RGGWCCY	1 cut(s)	402
Psp6I	CCWGG	5 cut(s)	102, 1309, 1481, 1740, 2148
PspCI	CACGTG	1 cut(s)	843
PspEI	GGTNACC	2 cut(s)	199, 1039
PspFI	CCCAGC	2 cut(s)	154, 1271
PspGI	CCWGG	5 cut(s)	102, 1309, 1481, 1740, 2148
PspN4I	GGNNCC	2 cut(s)	817, 1739
PspPI	GGNCC	8 cut(s)	106, 402, 780, 815, 1050, 1457, 1864, 2196
PspPPI	RGGWCCY	1 cut(s)	402
PstNI	CAGNNNCTG	1 cut(s)	584
PsuI	RGATCY	3 cut(s)	88, 1157, 1715
PsyI	GACNNNGTC	1 cut(s)	1483
RsaI	GTAC	8 cut(s)	240, 789, 926, 1169, 1508, 1576, 1599, 1746
RsaNI	GTAC	8 cut(s)	239, 788, 925, 1168, 1507, 1575, 1598, 1745
SaqAI	TTAA	6 cut(s)	323, 383, 1080, 1218, 1503, 2063
SatI	GCNGC	9 cut(s)	31, 34, 365, 546, 553, 590, 783, 1945, 2076
Sau3AI	GATC	9 cut(s)	88, 1157, 1201, 1243, 1371, 1566, 1715, 2152, 2165
Sau96I	GGNCC	8 cut(s)	106, 402, 780, 815, 1050, 1457, 1864, 2196
ScaI	AGTACT	2 cut(s)	1508, 1599
SchI	GAGTC	4 cut(s)	899, 1013, 1058, 2203
ScrFI	CCNGG	6 cut(s)	104, 1311, 1483, 1742, 2150, 2161
SduI	GDGCHC	1 cut(s)	1346
SexAI	ACCWGGT	2 cut(s)	1481, 1740
SfaNI	GCATC	8 cut(s)	256, 340, 631, 859, 1093, 1138, 1451, 2110
SfcI	CTRYAG	2 cut(s)	495, 593
Sfr274I	CTCGAG	1 cut(s)	110
SinI	GGWCC	4 cut(s)	402, 815, 1457, 1864
SlaI	CTCGAG	1 cut(s)	110
SmlI	CTYRAG	3 cut(s)	110, 540, 1265
SmoI	CTYRAG	3 cut(s)	110, 540, 1265
SpeI	ACTAGT	1 cut(s)	1133
SsiI	CCGC	5 cut(s)	31, 172, 367, 783, 1044
SspI	AATATT	1 cut(s)	1767
SspMI	CTAG	8 cut(s)	164, 276, 309, 1134, 1145, 1601, 1730, 1874
StyD4I	CCNGG	6 cut(s)	102, 1309, 1481, 1740, 2148, 2159
StyI	CCWWGG	2 cut(s)	149, 163
TaiI	ACGT	4 cut(s)	713, 845, 968, 2191
TaqI	TCGA	4 cut(s)	111, 1487, 1921, 2155
TatI	WGTACW	4 cut(s)	924, 1167, 1506, 1597
TauI	GCSGC	2 cut(s)	33, 785
TfiI	GAWTC	5 cut(s)	722, 1641, 1705, 1828, 2145
Tru1I	TTAA	6 cut(s)	323, 383, 1080, 1218, 1503, 2063
Tru9I	TTAA	6 cut(s)	323, 383, 1080, 1218, 1503, 2063
TscAI	CASTG	6 cut(s)	737, 907, 1066, 1390, 1559, 1789
TseFI	GTSAC	7 cut(s)	20, 740, 902, 1016, 1061, 1205, 1381
TseI	GCWGC	7 cut(s)	33, 364, 545, 552, 589, 1944, 2075
Tsp45I	GTSAC	7 cut(s)	20, 740, 902, 1016, 1061, 1205, 1381
TspDTI	ATGAA	7 cut(s)	17, 26, 699, 746, 960, 1002, 2074
TspGWI	ACGGA	3 cut(s)	256, 269, 2033
TspRI	CASTG	6 cut(s)	737, 907, 1066, 1390, 1559, 1789
Tth111I	GACNNNGTC	1 cut(s)	1483
Van91I	CCANNNNNTGG	2 cut(s)	812, 1788
VpaK11BI	GGWCC	4 cut(s)	402, 815, 1457, 1864
VspI	ATTAAT	1 cut(s)	323
XagI	CCTNNNNNAGG	1 cut(s)	1745
XapI	RAATTY	6 cut(s)	4, 122, 524, 613, 913, 955
XbaI	TCTAGA	2 cut(s)	275, 1144
XceI	RCATGY	2 cut(s)	1666, 1905
XhoI	CTCGAG	1 cut(s)	110
XmaJI	CCTAGG	1 cut(s)	163
XmiI	GTMKAC	1 cut(s)	1010
XspI	CTAG	8 cut(s)	164, 276, 309, 1134, 1145, 1601, 1730, 1874
ZrmI	AGTACT	2 cut(s)	1508, 1599

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.