Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0005838

Physical Location & Seq

Genomic Coordinates Forward (+)

8795239 .. 8800918

Gene Structure 5680 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1103800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2181 bp

ATGAACTTGATGGGGAAAGGTGACGCTGCCCGCTGCATTTTCCCCCTCACCGGTTTGCAAATTGGAGACTTGCAGTCTTATCTTTCGGATCTTAGCCTTTTCCTGGCCCTCGAAAGCAAGAAATTCTATATCTTGGTGGACAATCGGCCATGGCTGGGCGACCTAGGTTCGCGGTCAGCACACTTGTGGCAATTGATGGTTACCAAGTCAAGGTTGTCTCCTTTTGCAAACACTAAGGCGCGGAAGGTGAGAACAGAAGGAAATGATGCTTGCCCCAGACCAAAGACTGCAAAACCAAAGAAGCTTGCTAGGTGGTTCTCATTAATCAAGCATCAGAAGAAGGTGTTGTTACCTGTAAAGAAGCTGCAGAGATCTTTGCTTCTAAGAAGGGAGTTACATAGGACCTTGTATGGTTTTATTGTATTCGAAGTTGCATGGAGCAATGTTCGAGGTATCAATTACATCAATGAGCTTCAGACTGATACGTCGCTGGCTATAGAGGCTAAATCCATGCAAAGATGGGAATTTGACAGTATTGCTCAAGCTGCAAGCTGCATATCTTCGTGGTTCTCAGGAACAATCTCTGAGCAGCTACAGTTAAAAGAGCATCTGAATTCTTCCGTAGGAGAAGTTTTCTATGATGCTGAAGAGTTTCCAGAGACAGAAACTATGGCGGTTGTTGATGACAATATCTGTCACAATAATCTGCCCACTGGGGAAGATTCTCTCCACTGCCTTAGTCGCAACTTTAGTGTTCATTCTGATATCTGTGAAAATAGGGCCGGTGTACCGCATTCACCGCCTCCACCTACTGGACCCTATAAGAGAAGGAAAATAACAGCGTGTATTAGTGCTGGAGTTGAAGTAGATACTTATTCAGAGGAAGTGCAAAGCCCTGCCTGTGACTCTGAAAGTTCTGAGACGTATAAATGTTACTTTGAAGAAGAAATGCAAAACTCTGAGACTTATTCCTGTTACTGTGGAGATGAAATGCAAAACTCTGAGACCAATACCTGTGATTCTGAAGATGAGATACCGGTGACTGCGAGGGCCTATATCAGTGATTCTGAAGGTGCTGTTAAAGCTACTCCGTTCAGCAAAGAAGCTATACCTGTAACTGTCAATACCTATACTAGTGATTGTCAAGATGCTGTTGAATCTACCCAGTACAGGGATGTGCTGATTTTGTTCAGGTTCAATCACCGTGACCTCCCATTTAAACTAAGAGAAATAATAATGTCTGATCTCCGGTTGCTGACTTTGCTTGAGGCCGGGCTTCCATCTTGGGTTATCTTCCTTCAGTCATACCCTGGGTTTTGCCATATCTATCGCCCATGGATGTGCCCTCTGGCAAGAGCATTGTATGTGCTGATCTCAGTTGTCACTGTTTTAATTGGATTTTATGACCTATACAAAAATGTTCCAGTTCTCAAGGCAACTGCATCTCGTCTTTGTGGGCCTCTATTTGATTGGATAGAGACCTGGTCGTGGTTTCTGGCAATCAGGAGTACCACGCGATCCTTTTTTTCAGTTCTAGCTCAGCCATTGGTAGAACCTCTTGTGGAGTGTTTTGGATTCCTCCTTCCAGTATGGAACATGCTTATTGATGTATTAGAGAGCCTCTTTTCAGTCATTTGGATTCTGATTGGATCTTCATGCAGTCTAGTCGGGAATCTGATTGAGGTTTTAGTGTTTCCAATATGGTTTCTCCTGTCAGCCATCTGGAGCATTGGAACTTCCATTGTATATCCTATATTTTGGATTCTATGGGAAGTACTCTATGCTCCGGTTCGCATGGTCCTTTCACTAGCCAATGTTATAGTTTTTATTGGTGCATGCATATATGATACACTTCGAGATATCTGGCAAGTTATTTGCAGCATATTCAAGTTTGCTTCAGCTTCCCAGGCAACTGTGAAAACGGTTGAAGTTTCCATATGGCGTTCACTTTGGAATGACCTCTTTTCTCAGGTTTTCCGAGCTGTCAGGAGTATATTAAATGGTTTTGTTGCATTCTTCGTAGCTTGTAACAGGCATCGCCTTAGCATTTATAATCATATACAAGAGTTCACCCAAAGATTCCTGGACCGAACCCAGAGATCACAGCGTGAAGTTTCAAGACGTTATAGGCGCAGCAGAGACTCGGAATTTGTTCGAAGTAAGAAGGAAAAACAACCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

727

Amino Acids

83.12

Weight (kDa)

6.86

Isoelectric Point (pI)

58.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005838)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32970 AT2G32970 AT2G32970 AT2G32970
fragaria_vesca	FvH4_6g42290 FvH4_6g42290 FvH4_6g42290 FvH4_6g42290 FvH4_6g42290 FvH4_6g42290
malus_domestica	MD09G1113700.v1.1 MD17G1103800.v1.1
prunus_persica	Prupe.3G210900_v2.0.a1 Prupe.3G210900_v2.0.a1 Prupe.3G210900_v2.0.a1 Prupe.3G210900_v2.0.a1
pyrus_communis	pycom17g09790
rosa_chinensis	RchiOBHm_Chr2g0158131
rosa_laevigata	RLG00000021062
rosa_multiflora	Rmu_sc0005982.1_g000008 Rmu_sc0018610.1_g000001 Rmu_sc0032555.1_g000002
rosa_roxburghii	Rroxscaffold_2G00091640
rosa_samantha	Rh2AG532300 Rh2BG546400 Rh2CG516200 Rh2DG554900
rosa_wichuraiana	Rw2G044010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2052
AasI	GACNNNNNNGTC	1 cut(s)	484
AccB7I	CCANNNNNTGG	1 cut(s)	812
AccII	CGCG	3 cut(s)	172, 241, 1516
AciI	CCGC	6 cut(s)	31, 172, 241, 674, 791, 800
AclWI	GGATC	3 cut(s)	96, 1512, 1657
AcoI	YGGCCR	1 cut(s)	146
AcsI	RAATTY	4 cut(s)	122, 524, 613, 2147
AcuI	CTGAAG	6 cut(s)	458, 666, 1044, 1089, 1283, 1881
AdeI	CACNNNGTG	1 cut(s)	2108
AfaI	GTAC	4 cut(s)	789, 1169, 1510, 1776
AfiI	CCNNNNNNNGG	8 cut(s)	50, 103, 155, 210, 812, 1170, 1171, 1488
AgeI	ACCGGT	2 cut(s)	50, 1036
AgsI	TTSAA	7 cut(s)	863, 941, 1157, 1198, 1888, 1928, 2118
AhdI	GACNNNNNGTC	1 cut(s)	73
AhlI	ACTAGT	1 cut(s)	1133
AjnI	CCWGG	5 cut(s)	102, 1309, 1481, 1905, 2082
AleI	CACNNNNGTG	1 cut(s)	184
Alw26I	GTCTC	8 cut(s)	60, 222, 653, 914, 956, 998, 1472, 2133
AlwI	GGATC	3 cut(s)	96, 1512, 1657
AoxI	GGCC	6 cut(s)	105, 146, 780, 1050, 1269, 1457
ApeKI	GCWGC	8 cut(s)	26, 33, 364, 545, 552, 589, 1878, 2133
ApoI	RAATTY	4 cut(s)	122, 524, 613, 2147
ArsI	GACNNNNNNTTYG	2 cut(s)	2132, 2164
AseI	ATTAAT	1 cut(s)	323
AsiGI	ACCGGT	2 cut(s)	50, 1036
Asp700I	GAANNNNTTC	2 cut(s)	651, 2151
AspA2I	CCTAGG	1 cut(s)	163
AspLEI	GCGC	2 cut(s)	241, 2133
AspS9I	GGNCC	8 cut(s)	106, 402, 780, 815, 1050, 1457, 1798, 2086
AsuC2I	CCSGG	1 cut(s)	1273
AsuHPI	GGTGA	7 cut(s)	32, 40, 259, 789, 1051, 1193, 2062
AsuII	TTCGAA	2 cut(s)	426, 2155
AvaII	GGWCC	4 cut(s)	402, 815, 1798, 2086
AvrII	CCTAGG	1 cut(s)	163
BaeGI	GKGCMC	1 cut(s)	1346
BarI	GAAGNNNNNNTAC	2 cut(s)	1017, 1049
BbvI	GCAGC	8 cut(s)	13, 20, 351, 532, 539, 601, 1890, 2145
BccI	CCATC	5 cut(s)	4, 190, 513, 1288, 1727
BcgI	CGANNNNNNTGC	2 cut(s)	1648, 1682
BciT130I	CCWGG	5 cut(s)	104, 1311, 1483, 1907, 2084
BcnI	CCSGG	1 cut(s)	1273
BcoDI	GTCTC	8 cut(s)	60, 222, 653, 914, 956, 998, 1472, 2133
BcuI	ACTAGT	1 cut(s)	1133
BfaI	CTAG	6 cut(s)	164, 309, 1134, 1535, 1664, 1808
BfmI	CTRYAG	3 cut(s)	365, 495, 593
BglII	AGATCT	1 cut(s)	371
BisI	GCNGC	8 cut(s)	27, 34, 365, 546, 553, 590, 1879, 2134
BlnI	CCTAGG	1 cut(s)	163
BlpI	GCTNAGC	1 cut(s)	1539
BlsI	GCNGC	8 cut(s)	28, 35, 366, 547, 554, 591, 1880, 2135
BmcAI	AGTACT	1 cut(s)	1776
Bme1390I	CCNGG	6 cut(s)	104, 1273, 1311, 1483, 1907, 2084
Bme18I	GGWCC	4 cut(s)	402, 815, 1798, 2086
BmeRI	GACNNNNNGTC	1 cut(s)	73
BmgT120I	GGNCC	8 cut(s)	106, 402, 780, 815, 1050, 1457, 1798, 2086
BmiI	GGNNCC	1 cut(s)	817
BmrFI	CCNGG	6 cut(s)	104, 1273, 1311, 1483, 1907, 2084
BmrI	ACTGGG	2 cut(s)	723, 1159
BmsI	GCATC	7 cut(s)	256, 340, 616, 631, 1138, 1451, 2044
BmuI	ACTGGG	2 cut(s)	723, 1159
BpmI	CTGGAG	2 cut(s)	876, 1744
Bpu10I	CCTNAGC	1 cut(s)	2042
Bpu1102I	GCTNAGC	1 cut(s)	1539
Bpu14I	TTCGAA	2 cut(s)	426, 2155
BpuEI	CTTGAG	3 cut(s)	525, 1286, 1415
BpuMI	CCSGG	1 cut(s)	1273
BsaI	GGTCTC	2 cut(s)	998, 1472
BsaJI	CCNNGG	6 cut(s)	149, 163, 1309, 1310, 1334, 1905
BsaWI	WCCGGW	4 cut(s)	50, 1036, 1248, 1786
BsaXI	ACNNNNNCTCC	2 cut(s)	849, 879
Bsc4I	CCNNNNNNNGG	8 cut(s)	50, 103, 155, 210, 812, 1170, 1171, 1488
Bse118I	RCCGGY	3 cut(s)	50, 782, 1036
Bse1I	ACTGG	5 cut(s)	718, 817, 1165, 1424, 1586
Bse3DI	GCAATG	1 cut(s)	448
BseBI	CCWGG	5 cut(s)	104, 1311, 1483, 1907, 2084
BseDI	CCNNGG	6 cut(s)	149, 163, 1309, 1310, 1334, 1905
BseGI	GGATG	2 cut(s)	1180, 1344
BseLI	CCNNNNNNNGG	8 cut(s)	50, 103, 155, 210, 812, 1170, 1171, 1488
BseMI	GCAATG	1 cut(s)	448
BseMII	CTCAG	8 cut(s)	576, 585, 909, 951, 993, 1389, 1553, 1982
BseNI	ACTGG	5 cut(s)	718, 817, 1165, 1424, 1586
BseSI	GKGCMC	1 cut(s)	1346
BseXI	GCAGC	8 cut(s)	13, 20, 351, 532, 539, 601, 1890, 2145
BseYI	CCCAGC	1 cut(s)	154
Bsh1236I	CGCG	3 cut(s)	172, 241, 1516
BshFI	GGCC	6 cut(s)	107, 148, 782, 1052, 1271, 1459
BshTI	ACCGGT	2 cut(s)	50, 1036
BsiSI	CCGG	6 cut(s)	51, 783, 1037, 1249, 1272, 1787
BslI	CCNNNNNNNGG	8 cut(s)	50, 103, 155, 210, 812, 1170, 1171, 1488
BsmAI	GTCTC	8 cut(s)	60, 222, 653, 914, 956, 998, 1472, 2133
BsmBI	CGTCTC	1 cut(s)	914
BsmI	GAATGC	2 cut(s)	793, 2012
BsnI	GGCC	6 cut(s)	107, 148, 782, 1052, 1271, 1459
Bso31I	GGTCTC	2 cut(s)	998, 1472
Bsp119I	TTCGAA	2 cut(s)	426, 2155
Bsp1286I	GDGCHC	1 cut(s)	1346
Bsp143I	GATC	7 cut(s)	88, 371, 1243, 1371, 1517, 1649, 2099
Bsp1720I	GCTNAGC	1 cut(s)	1539
Bsp19I	CCATGG	2 cut(s)	149, 1334
BspACI	CCGC	6 cut(s)	31, 172, 241, 674, 791, 800
BspANI	GGCC	6 cut(s)	107, 148, 782, 1052, 1271, 1459
BspCNI	CTCAG	8 cut(s)	577, 584, 910, 952, 994, 1388, 1552, 1981
BspFNI	CGCG	3 cut(s)	172, 241, 1516
BspLI	GGNNCC	1 cut(s)	817
BspMAI	CTGCAG	1 cut(s)	369
BspPI	GGATC	3 cut(s)	96, 1512, 1657
BspT104I	TTCGAA	2 cut(s)	426, 2155
BspTNI	GGTCTC	2 cut(s)	998, 1472
BsrDI	GCAATG	1 cut(s)	448
BsrFI	RCCGGY	3 cut(s)	50, 782, 1036
BsrI	ACTGG	5 cut(s)	718, 817, 1165, 1424, 1586
BssAI	RCCGGY	3 cut(s)	50, 782, 1036
BssECI	CCNNGG	6 cut(s)	149, 163, 1309, 1310, 1334, 1905
BssMI	GATC	7 cut(s)	88, 371, 1243, 1371, 1517, 1649, 2099
BssT1I	CCWWGG	3 cut(s)	149, 163, 1334
Bst2UI	CCWGG	5 cut(s)	104, 1311, 1483, 1907, 2084
Bst4CI	ACNGT	8 cut(s)	533, 597, 980, 1120, 1205, 1387, 1915, 1924
Bst6I	CTCTTC	1 cut(s)	642
BstBI	TTCGAA	2 cut(s)	426, 2155
BstC8I	GCNNGC	6 cut(s)	31, 271, 306, 492, 550, 1837
BstDSI	CCRYGG	2 cut(s)	149, 1334
BstEII	GGTNACC	1 cut(s)	199
BstF5I	GGATG	2 cut(s)	1180, 1344
BstFNI	CGCG	3 cut(s)	172, 241, 1516
BstHHI	GCGC	2 cut(s)	241, 2133
BstKTI	GATC	7 cut(s)	91, 374, 1246, 1374, 1520, 1652, 2102
BstMAI	GTCTC	8 cut(s)	60, 222, 653, 914, 956, 998, 1472, 2133
BstMBI	GATC	7 cut(s)	88, 371, 1243, 1371, 1517, 1649, 2099
BstMWI	GCNNNNNNNGC	7 cut(s)	500, 545, 741, 799, 1082, 1261, 1907
BstNI	CCWGG	5 cut(s)	104, 1311, 1483, 1907, 2084
BstNSI	RCATGY	2 cut(s)	1600, 1839
BstPI	GGTNACC	1 cut(s)	199
BstSCI	CCNGG	6 cut(s)	102, 1271, 1309, 1481, 1905, 2082
BstSFI	CTRYAG	3 cut(s)	365, 495, 593
BstSLI	GKGCMC	1 cut(s)	1346
BstUI	CGCG	3 cut(s)	172, 241, 1516
BstV1I	GCAGC	8 cut(s)	13, 20, 351, 532, 539, 601, 1890, 2145
BstX2I	RGATCY	3 cut(s)	88, 371, 1649
BstYI	RGATCY	3 cut(s)	88, 371, 1649
BsuRI	GGCC	6 cut(s)	107, 148, 782, 1052, 1271, 1459
BtgI	CCRYGG	2 cut(s)	149, 1334
BtgZI	GCGATG	1 cut(s)	2021
BtsCI	GGATG	2 cut(s)	1180, 1344
BtsI	GCAGTG	1 cut(s)	730
BtsIMutI	CAGTG	4 cut(s)	711, 730, 1066, 1383
Cac8I	GCNNGC	6 cut(s)	31, 271, 306, 492, 550, 1837
CfoI	GCGC	2 cut(s)	241, 2133
Cfr10I	RCCGGY	3 cut(s)	50, 782, 1036
Cfr13I	GGNCC	8 cut(s)	106, 402, 780, 815, 1050, 1457, 1798, 2086
CseI	GACGC	1 cut(s)	32
CsiI	ACCWGGT	1 cut(s)	1481
Csp6I	GTAC	4 cut(s)	788, 1168, 1509, 1775
CspAI	ACCGGT	2 cut(s)	50, 1036
CviAII	CATG	8 cut(s)	150, 435, 511, 1335, 1597, 1656, 1795, 1836
CviQI	GTAC	4 cut(s)	788, 1168, 1509, 1775
DpnI	GATC	7 cut(s)	90, 373, 1245, 1373, 1519, 1651, 2101
DpnII	GATC	7 cut(s)	88, 371, 1243, 1371, 1517, 1649, 2099
DraI	TTTAAA	1 cut(s)	1219
DraIII	CACNNNGTG	1 cut(s)	2108
DrdI	GACNNNNNNGTC	1 cut(s)	484
DriI	GACNNNNNGTC	1 cut(s)	73
DseDI	GACNNNNNNGTC	1 cut(s)	484
EaeI	YGGCCR	1 cut(s)	146
Eam1104I	CTCTTC	1 cut(s)	642
Eam1105I	GACNNNNNGTC	1 cut(s)	73
EarI	CTCTTC	1 cut(s)	642
Eco130I	CCWWGG	3 cut(s)	149, 163, 1334
Eco31I	GGTCTC	2 cut(s)	998, 1472
Eco32I	GATATC	2 cut(s)	766, 1861
Eco47I	GGWCC	4 cut(s)	402, 815, 1798, 2086
Eco57I	CTGAAG	6 cut(s)	458, 666, 1044, 1089, 1283, 1881
Eco91I	GGTNACC	1 cut(s)	199
EcoO109I	RGGNCCY	2 cut(s)	402, 1050
EcoO65I	GGTNACC	1 cut(s)	199
EcoRI	GAATTC	1 cut(s)	613
EcoRII	CCWGG	5 cut(s)	102, 1309, 1481, 1905, 2082
EcoRV	GATATC	2 cut(s)	766, 1861
EcoT14I	CCWWGG	3 cut(s)	149, 163, 1334
EcoT22I	ATGCAT	1 cut(s)	1841
ErhI	CCWWGG	3 cut(s)	149, 163, 1334
Esp3I	CGTCTC	1 cut(s)	914
FaeI	CATG	8 cut(s)	153, 438, 514, 1338, 1600, 1659, 1798, 1839
FatI	CATG	8 cut(s)	149, 434, 510, 1334, 1596, 1655, 1794, 1835
FauI	CCCGC	1 cut(s)	38
FauNDI	CATATG	1 cut(s)	1937
Fnu4HI	GCNGC	8 cut(s)	27, 34, 365, 546, 553, 590, 1879, 2134
FokI	GGATG	2 cut(s)	1187, 1351
Fsp4HI	GCNGC	8 cut(s)	27, 34, 365, 546, 553, 590, 1879, 2134
FspBI	CTAG	6 cut(s)	164, 309, 1134, 1535, 1664, 1808
GlaI	GCGC	2 cut(s)	240, 2132
GluI	GCNGC	8 cut(s)	27, 34, 365, 546, 553, 590, 1879, 2134
GsaI	CCCAGC	1 cut(s)	158
GsuI	CTGGAG	2 cut(s)	876, 1744
HaeIII	GGCC	6 cut(s)	107, 148, 782, 1052, 1271, 1459
HapII	CCGG	6 cut(s)	51, 783, 1037, 1249, 1272, 1787
HgaI	GACGC	1 cut(s)	32
HhaI	GCGC	2 cut(s)	241, 2133
Hin1II	CATG	8 cut(s)	153, 438, 514, 1338, 1600, 1659, 1798, 1839
Hin6I	GCGC	2 cut(s)	239, 2131
HinP1I	GCGC	2 cut(s)	239, 2131
HindIII	AAGCTT	1 cut(s)	302
HpaII	CCGG	6 cut(s)	51, 783, 1037, 1249, 1272, 1787
HphI	GGTGA	7 cut(s)	32, 40, 259, 789, 1051, 1193, 2062
Hpy166II	GTNNAC	4 cut(s)	139, 788, 1946, 2070
Hpy188III	TCNNGA	9 cut(s)	573, 656, 1145, 1504, 1669, 1723, 1856, 1987, 2118
Hpy8I	GTNNAC	4 cut(s)	139, 788, 1946, 2070
Hpy99I	CGWCG	1 cut(s)	490
HpyAV	CCTTC	9 cut(s)	238, 251, 334, 381, 822, 1064, 1307, 1592, 2158
HpyCH4III	ACNGT	8 cut(s)	533, 597, 980, 1120, 1205, 1387, 1915, 1924
HpyCH4IV	ACGT	3 cut(s)	485, 923, 2122
HpyF10VI	GCNNNNNNNGC	7 cut(s)	500, 545, 741, 799, 1082, 1261, 1907
HpySE526I	ACGT	3 cut(s)	485, 923, 2122
Hsp92II	CATG	8 cut(s)	153, 438, 514, 1338, 1600, 1659, 1798, 1839
HspAI	GCGC	2 cut(s)	239, 2131
Kzo9I	GATC	7 cut(s)	88, 371, 1243, 1371, 1517, 1649, 2099
LmnI	GCTCC	3 cut(s)	438, 1725, 1789
Lsp1109I	GCAGC	8 cut(s)	13, 20, 351, 532, 539, 601, 1890, 2145
LweI	GCATC	7 cut(s)	256, 340, 616, 631, 1138, 1451, 2044
MabI	ACCWGGT	1 cut(s)	1481
MaeI	CTAG	6 cut(s)	164, 309, 1134, 1535, 1664, 1808
MaeII	ACGT	3 cut(s)	485, 923, 2122
MalI	GATC	7 cut(s)	90, 373, 1245, 1373, 1519, 1651, 2101
MboI	GATC	7 cut(s)	88, 371, 1243, 1371, 1517, 1649, 2099
MfeI	CAATTG	1 cut(s)	191
MflI	RGATCY	3 cut(s)	88, 371, 1649
MhlI	GDGCHC	1 cut(s)	1346
MluCI	AATT	8 cut(s)	60, 122, 191, 457, 524, 613, 1392, 2147
MlyI	GAGTC	2 cut(s)	899, 2135
Mph1103I	ATGCAT	1 cut(s)	1841
MroXI	GAANNNNTTC	2 cut(s)	651, 2151
MseI	TTAA	6 cut(s)	323, 599, 1080, 1218, 1391, 1997
MslI	CAYNNNNRTG	2 cut(s)	184, 1339
MspA1I	CMGCKG	1 cut(s)	33
MspI	CCGG	6 cut(s)	51, 783, 1037, 1249, 1272, 1787
MspR9I	CCNGG	6 cut(s)	104, 1273, 1311, 1483, 1907, 2084
MunI	CAATTG	1 cut(s)	191
Mva1269I	GAATGC	2 cut(s)	793, 2012
MvaI	CCWGG	5 cut(s)	104, 1311, 1483, 1907, 2084
MvnI	CGCG	3 cut(s)	172, 241, 1516
MwoI	GCNNNNNNNGC	7 cut(s)	500, 545, 741, 799, 1082, 1261, 1907
NciI	CCSGG	1 cut(s)	1273
NcoI	CCATGG	2 cut(s)	149, 1334
NdeI	CATATG	1 cut(s)	1937
NdeII	GATC	7 cut(s)	88, 371, 1243, 1371, 1517, 1649, 2099
NlaIII	CATG	8 cut(s)	153, 438, 514, 1338, 1600, 1659, 1798, 1839
NlaIV	GGNNCC	1 cut(s)	817
NmuCI	GTSAC	6 cut(s)	20, 695, 902, 1039, 1205, 1381
NsiI	ATGCAT	1 cut(s)	1841
NspI	RCATGY	2 cut(s)	1600, 1839
NspV	TTCGAA	2 cut(s)	426, 2155
OliI	CACNNNNGTG	1 cut(s)	184
PaeI	GCATGC	1 cut(s)	1839
PasI	CCCWGGG	1 cut(s)	1310
PctI	GAATGC	2 cut(s)	793, 2012
PdmI	GAANNNNTTC	2 cut(s)	651, 2151
PfeI	GAWTC	9 cut(s)	722, 1019, 1064, 1157, 1575, 1639, 1672, 1762, 2079
PflFI	GACNNNGTC	1 cut(s)	1483
PflMI	CCANNNNNTGG	1 cut(s)	812
PfoI	TCCNGGA	1 cut(s)	2082
PinAI	ACCGGT	2 cut(s)	50, 1036
PkrI	GCNGC	8 cut(s)	28, 35, 366, 547, 554, 591, 1880, 2135
PleI	GAGTC	2 cut(s)	899, 2135
PpsI	GAGTC	2 cut(s)	899, 2135
PpuMI	RGGWCCY	1 cut(s)	402
PshBI	ATTAAT	1 cut(s)	323
PsiI	TTATAA	1 cut(s)	2052
Psp5II	RGGWCCY	1 cut(s)	402
Psp6I	CCWGG	5 cut(s)	102, 1309, 1481, 1905, 2082
PspEI	GGTNACC	1 cut(s)	199
PspFI	CCCAGC	1 cut(s)	154
PspGI	CCWGG	5 cut(s)	102, 1309, 1481, 1905, 2082
PspN4I	GGNNCC	1 cut(s)	817
PspPI	GGNCC	8 cut(s)	106, 402, 780, 815, 1050, 1457, 1798, 2086
PspPPI	RGGWCCY	1 cut(s)	402
PstI	CTGCAG	1 cut(s)	369
PsuI	RGATCY	3 cut(s)	88, 371, 1649
PsyI	GACNNNGTC	1 cut(s)	1483
RsaI	GTAC	4 cut(s)	789, 1169, 1510, 1776
RsaNI	GTAC	4 cut(s)	788, 1168, 1509, 1775
RseI	CAYNNNNRTG	2 cut(s)	184, 1339
SaqAI	TTAA	6 cut(s)	323, 599, 1080, 1218, 1391, 1997
SatI	GCNGC	8 cut(s)	27, 34, 365, 546, 553, 590, 1879, 2134
Sau3AI	GATC	7 cut(s)	88, 371, 1243, 1371, 1517, 1649, 2099
Sau96I	GGNCC	8 cut(s)	106, 402, 780, 815, 1050, 1457, 1798, 2086
ScaI	AGTACT	1 cut(s)	1776
SchI	GAGTC	2 cut(s)	899, 2135
ScrFI	CCNGG	6 cut(s)	104, 1273, 1311, 1483, 1907, 2084
SduI	GDGCHC	1 cut(s)	1346
SexAI	ACCWGGT	1 cut(s)	1481
SfaNI	GCATC	7 cut(s)	256, 340, 616, 631, 1138, 1451, 2044
SfcI	CTRYAG	3 cut(s)	365, 495, 593
SfuI	TTCGAA	2 cut(s)	426, 2155
SinI	GGWCC	4 cut(s)	402, 815, 1798, 2086
SmiMI	CAYNNNNRTG	2 cut(s)	184, 1339
SmlI	CTYRAG	3 cut(s)	540, 1265, 1430
SmoI	CTYRAG	3 cut(s)	540, 1265, 1430
SpeI	ACTAGT	1 cut(s)	1133
SphI	GCATGC	1 cut(s)	1839
Sse9I	AATT	8 cut(s)	60, 122, 191, 457, 524, 613, 1392, 2147
SsiI	CCGC	6 cut(s)	31, 172, 241, 674, 791, 800
SspMI	CTAG	6 cut(s)	164, 309, 1134, 1535, 1664, 1808
StyD4I	CCNGG	6 cut(s)	102, 1271, 1309, 1481, 1905, 2082
StyI	CCWWGG	3 cut(s)	149, 163, 1334
TaaI	ACNGT	8 cut(s)	533, 597, 980, 1120, 1205, 1387, 1915, 1924
TaiI	ACGT	3 cut(s)	488, 926, 2125
TaqI	TCGA	5 cut(s)	111, 426, 448, 1855, 2155
TaqII	GACCGA	1 cut(s)	2103
TasI	AATT	8 cut(s)	60, 122, 191, 457, 524, 613, 1392, 2147
TatI	WGTACW	2 cut(s)	1167, 1774
TfiI	GAWTC	9 cut(s)	722, 1019, 1064, 1157, 1575, 1639, 1672, 1762, 2079
Tru1I	TTAA	6 cut(s)	323, 599, 1080, 1218, 1391, 1997
Tru9I	TTAA	6 cut(s)	323, 599, 1080, 1218, 1391, 1997
TscAI	CASTG	4 cut(s)	718, 737, 1066, 1390
TseFI	GTSAC	6 cut(s)	20, 695, 902, 1039, 1205, 1381
TseI	GCWGC	8 cut(s)	26, 33, 364, 545, 552, 589, 1878, 2133
Tsp45I	GTSAC	6 cut(s)	20, 695, 902, 1039, 1205, 1381
TspDTI	ATGAA	4 cut(s)	17, 746, 1002, 1644
TspGWI	ACGGA	2 cut(s)	610, 1080
TspRI	CASTG	4 cut(s)	718, 737, 1066, 1390
Tth111I	GACNNNGTC	1 cut(s)	1483
Van91I	CCANNNNNTGG	1 cut(s)	812
VpaK11BI	GGWCC	4 cut(s)	402, 815, 1798, 2086
VspI	ATTAAT	1 cut(s)	323
XapI	RAATTY	4 cut(s)	122, 524, 613, 2147
XceI	RCATGY	2 cut(s)	1600, 1839
XmaJI	CCTAGG	1 cut(s)	163
XmnI	GAANNNNTTC	2 cut(s)	651, 2151
XspI	CTAG	6 cut(s)	164, 309, 1134, 1535, 1664, 1808
ZrmI	AGTACT	1 cut(s)	1776
Zsp2I	ATGCAT	1 cut(s)	1841

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.