Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0005838

Physical Location & Seq

Genomic Coordinates Reverse (-)

75492702 .. 75498900

Gene Structure 6199 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG546400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2055 bp

ATGGTTTTGACGGGGAAAAGTGACGCCGGCCGGTGCATTTTCCCCCTCACTGGATTGCAAATCGGAGACTTGCAATCGTATCTTTCGGATCTTAGCTTAGTGCTGGCTTCGGAAAGTAGGAAGTTCTATATTTTGGTGGACAATCGGCCATGGCTGAGAGGTTCTCGGCCAGCGCACTTCTGGCAATTGATGGTTACCAAGTCAAGGGAATCTCCTTTTGCAAACACTAAAGCGCGAAAGGACAGAAAACAAGGAAAGGATGCGAGCTCCAAGAGTGTTAAACCCAAAAAGTATACTAGGTGGGTCTCATTCATCAAGGAAGAAGCATTGTCTCGGAAGAGGGTTTTGCTACCTGTAAAGAAACTGCGCAATTCTTTTCTTTTAAGCAGTGAGATGCATAGGACCTTGTATGGTTTCATTGTGTTTGAAGTTGCGTGGAGCAATGTTCGAGGTATTAATTACTTGAATGAGCTTCAGACTGATACATCACTGGCTACAGAGGCTAAATTCATGCAAAGATGGGAATTCGACAGTATTGCTCAAGCTGCAAACTGTATATCTTCATGGTTCTCAGGAACAGTCTCTGAGAAGCGACAATTGGGAGAGTACCTGGATTCCCTAGGAGAGGTGTTTTATGATGCCCAAGTAACTATGCCAGTTGATGTTGAAGACGAATTTTCGTTTAATCGTCTTTCTATCGAGGAAAATTCTCTTCACAGCCTCAGTAGCAACTATAGTGTATGCTCTCCAACCAACGACGGTAGCACTAGTGTTCCTCATTCACCTCCTCCACCTACTGGACCTTACAAGAGAAGGAAAATAGCAAACTCCATTAATATTGGAGATGGAGTTGATGTAAATTCTGATGAGTTTCAAGATGGCGAGACCTATGCTAGTGACTACGAAGATGCTGTTGAAGATACCCAGGACATGAAAGATGATATACCAGTGAATGTAAAGACCTATATGGACAGTCAAGAGGCTTTTGATGCTACTCAGTACAGGGAAGATGGTATACCTGTGCATGTTGAGACATGTAACAGTGACTGTGAAGATGCTGTTGAAGCTACTCAGTACAGGGATGTCTTGATTTTGTTCAGGTTCAATGACCATGATCTCCCGTTTAAACTCAGGGATATAATAATGTCTGATCTCCGGTTATTGACCTTGCTAGAGGCTGGGCTTCCTTCTTGGGCTATCTTCCTTCAGTCTTACCCAGGGTTTTGCAAAATTTATCGCCCGTGGATGTGTCCTCTTGCAAGAGCTTTATATGTGGTGATCTCAGTTGCCACCGTCCTAATTGGATTTTATGACCTGTACAAAAATGTTCCAGTTCTCAAGGTAACTGCATCTCGTATTTGTGGGCCTCTATTTGATTGGATAGAGACCTGGTCGATGGTAACAAGGATCAAATACTTGGGAACAATGCTATTTCTGCATCACTCTCAGAAGGTTGTTCAGTGGTTCTTGACTATCAGGAGTACCACTCGATCCTTTTTTTCAGTTTTTGCCCGGCCGATGTTCGAACCTTTCGTAGAGTGCTTTAGTTTCCTTCTCCCAGTTTGGAATGTGTTTTTTGAGGTATTGGGGAGCATCTGTACAATGATTTTGTTTCTGATTGAGTCTTCTTGCAATATAGTGGAGAACCTGGTGGAGGTTTTACTGTTTCCAATATGGTTTTTCCTGTCGTCCATCTGGAGCATTGCCACTTCTGTCATATATCCTATATTTGGGATGCTGTGGGCAATACTCTATGCTCCAATTCACATGTTTCTTGCACTAGCCAATTTCATTGCCTTTCTTTTTACTTGTATATATGACACTCTTCGAGATACATGGAAGTTTATTGGCAGCATATTCCAGTTTGCTTCAGCCTCTCAGGCAACAGTGAGGACTGTTGAAGTTTCCATATGGCGTTCACTTTGGAATGACCTCTTTTCACAGATTTTCCGTGCTCTTAGGAGTATATTAAACGGTTTTGTTGCATTCTTCACAGCTTGTAACAGGCATCGGCTGAGGTGTGCTTATAGTTCCTTTGCTTTCCACACTACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

684

Amino Acids

78.53

Weight (kDa)

6.18

Isoelectric Point (pI)

48.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005838)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32970 AT2G32970 AT2G32970 AT2G32970
fragaria_vesca	FvH4_6g42290 FvH4_6g42290 FvH4_6g42290 FvH4_6g42290 FvH4_6g42290 FvH4_6g42290
malus_domestica	MD09G1113700.v1.1 MD17G1103800.v1.1
prunus_persica	Prupe.3G210900_v2.0.a1 Prupe.3G210900_v2.0.a1 Prupe.3G210900_v2.0.a1 Prupe.3G210900_v2.0.a1
pyrus_communis	pycom17g09790
rosa_chinensis	RchiOBHm_Chr2g0158131
rosa_laevigata	RLG00000021062
rosa_multiflora	Rmu_sc0005982.1_g000008 Rmu_sc0018610.1_g000001 Rmu_sc0032555.1_g000002
rosa_roxburghii	Rroxscaffold_2G00091640
rosa_samantha	Rh2AG532300 Rh2BG546400 Rh2CG516200 Rh2DG554900
rosa_wichuraiana	Rw2G044010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	368
AccB7I	CCANNNNNTGG	1 cut(s)	797
AccI	GTMKAC	2 cut(s)	293, 1015
AccII	CGCG	1 cut(s)	235
AclWI	GGATC	3 cut(s)	96, 1415, 1485
AcoI	YGGCCR	4 cut(s)	28, 146, 167, 1514
AcsI	RAATTY	6 cut(s)	506, 524, 674, 706, 859, 1230
AcuI	CTGAAG	3 cut(s)	458, 1190, 1854
AcyI	GRCGYC	1 cut(s)	24
AfaI	GTAC	6 cut(s)	608, 1001, 1076, 1319, 1483, 1600
AfiI	CCNNNNNNNGG	6 cut(s)	50, 204, 625, 797, 1654, 1730
AflIII	ACRYGT	2 cut(s)	1034, 1767
AgsI	TTSAA	8 cut(s)	428, 466, 668, 875, 917, 1064, 1105, 1901
AhlI	ACTAGT	1 cut(s)	767
AjnI	CCWGG	5 cut(s)	609, 924, 1216, 1388, 1647
AjuI	GAANNNNNNNTTGG	2 cut(s)	581, 613
AluBI	AGCT	7 cut(s)	96, 267, 472, 545, 1067, 1265, 1997
AluI	AGCT	7 cut(s)	96, 267, 472, 545, 1067, 1265, 1997
Alw21I	GWGCWC	2 cut(s)	269, 1957
Alw26I	GTCTC	7 cut(s)	60, 310, 336, 586, 878, 1025, 1379
AlwI	GGATC	3 cut(s)	96, 1415, 1485
AlwNI	CAGNNNCTG	2 cut(s)	584, 1047
AoxI	GGCC	5 cut(s)	28, 146, 167, 1364, 1514
ApeKI	GCWGC	2 cut(s)	545, 1851
ApoI	RAATTY	6 cut(s)	506, 524, 674, 706, 859, 1230
AseI	ATTAAT	2 cut(s)	456, 834
AspA2I	CCTAGG	1 cut(s)	619
AspLEI	GCGC	3 cut(s)	175, 235, 369
AspS9I	GGNCC	3 cut(s)	402, 800, 1364
AsuC2I	CCSGG	1 cut(s)	1513
AsuHPI	GGTGA	2 cut(s)	774, 1288
AsuII	TTCGAA	1 cut(s)	1524
AvaII	GGWCC	2 cut(s)	402, 800
AvrII	CCTAGG	1 cut(s)	619
BanII	GRGCYC	1 cut(s)	269
BarI	GAAGNNNNNNTAC	2 cut(s)	999, 1031
BbsI	GAAGAC	2 cut(s)	675, 1617
Bbv12I	GWGCWC	2 cut(s)	269, 1957
BbvCI	CCTCAGC	1 cut(s)	2015
BbvI	GCAGC	2 cut(s)	532, 1863
BccI	CCATC	7 cut(s)	184, 513, 839, 872, 1004, 1390, 1700
BcgI	CGANNNNNNTGC	4 cut(s)	518, 552, 872, 906
BciT130I	CCWGG	5 cut(s)	611, 926, 1218, 1390, 1649
BcnI	CCSGG	1 cut(s)	1513
BcoDI	GTCTC	7 cut(s)	60, 310, 336, 586, 878, 1025, 1379
BcuI	ACTAGT	1 cut(s)	767
BfaI	CTAG	6 cut(s)	297, 620, 768, 894, 1172, 1781
BfmI	CTRYAG	2 cut(s)	495, 733
BglI	GCCNNNNNGGC	1 cut(s)	1880
BisI	GCNGC	2 cut(s)	546, 1852
BlnI	CCTAGG	1 cut(s)	619
BlsI	GCNGC	2 cut(s)	547, 1853
Bme1390I	CCNGG	6 cut(s)	611, 926, 1218, 1390, 1513, 1649
Bme18I	GGWCC	2 cut(s)	402, 800
BmgT120I	GGNCC	3 cut(s)	402, 800, 1364
BmrFI	CCNGG	6 cut(s)	611, 926, 1218, 1390, 1513, 1649
BmrI	ACTGGG	1 cut(s)	1553
BmuI	ACTGGG	1 cut(s)	1553
BpiI	GAAGAC	2 cut(s)	675, 1617
BplI	GAGNNNNNCTC	4 cut(s)	148, 180, 1471, 1503
BpmI	CTGGAG	1 cut(s)	1717
Bpu10I	CCTNAGC	1 cut(s)	2015
Bpu14I	TTCGAA	1 cut(s)	1524
BpuEI	CTTGAG	2 cut(s)	525, 1322
BpuMI	CCSGG	1 cut(s)	1513
BsaHI	GRCGYC	1 cut(s)	24
BsaI	GGTCTC	3 cut(s)	310, 878, 1379
BsaJI	CCNNGG	6 cut(s)	149, 619, 924, 1216, 1217, 1241
BsaWI	WCCGGW	1 cut(s)	1155
BsaXI	ACNNNNNCTCC	6 cut(s)	834, 840, 864, 870, 1582, 1612
Bsc4I	CCNNNNNNNGG	6 cut(s)	50, 204, 625, 797, 1654, 1730
Bse118I	RCCGGY	2 cut(s)	26, 30
Bse1I	ACTGG	8 cut(s)	55, 495, 656, 802, 947, 1331, 1559, 1861
Bse3DI	GCAATG	3 cut(s)	448, 1701, 1791
BseBI	CCWGG	5 cut(s)	611, 926, 1218, 1390, 1649
BseDI	CCNNGG	6 cut(s)	149, 619, 924, 1216, 1217, 1241
BseGI	GGATG	4 cut(s)	265, 1087, 1251, 1740
BseLI	CCNNNNNNNGG	6 cut(s)	50, 204, 625, 797, 1654, 1730
BseMI	GCAATG	3 cut(s)	448, 1701, 1791
BseNI	ACTGG	8 cut(s)	55, 495, 656, 802, 947, 1331, 1559, 1861
BseRI	GAGGAG	1 cut(s)	777
BseX3I	CGGCCG	2 cut(s)	28, 1514
BseXI	GCAGC	2 cut(s)	532, 1863
BseYI	CCCAGC	1 cut(s)	1178
Bsh1236I	CGCG	1 cut(s)	235
Bsh1285I	CGRYCG	2 cut(s)	31, 1517
BshFI	GGCC	5 cut(s)	30, 148, 169, 1366, 1516
BsiEI	CGRYCG	2 cut(s)	31, 1517
BsiHKAI	GWGCWC	2 cut(s)	269, 1957
BsiSI	CCGG	4 cut(s)	27, 31, 1156, 1513
BslI	CCNNNNNNNGG	6 cut(s)	50, 204, 625, 797, 1654, 1730
BsmAI	GTCTC	7 cut(s)	60, 310, 336, 586, 878, 1025, 1379
BsmI	GAATGC	1 cut(s)	1985
BsnI	GGCC	5 cut(s)	30, 148, 169, 1366, 1516
Bso31I	GGTCTC	3 cut(s)	310, 878, 1379
Bsp119I	TTCGAA	1 cut(s)	1524
Bsp1286I	GDGCHC	2 cut(s)	269, 1957
Bsp1407I	TGTACA	2 cut(s)	1317, 1598
Bsp143I	GATC	6 cut(s)	88, 1114, 1150, 1278, 1407, 1490
Bsp19I	CCATGG	1 cut(s)	149
BspANI	GGCC	5 cut(s)	30, 148, 169, 1366, 1516
BspFNI	CGCG	1 cut(s)	235
BspPI	GGATC	3 cut(s)	96, 1415, 1485
BspT104I	TTCGAA	1 cut(s)	1524
BspTNI	GGTCTC	3 cut(s)	310, 878, 1379
BsrDI	GCAATG	3 cut(s)	448, 1701, 1791
BsrFI	RCCGGY	2 cut(s)	26, 30
BsrGI	TGTACA	2 cut(s)	1317, 1598
BsrI	ACTGG	8 cut(s)	55, 495, 656, 802, 947, 1331, 1559, 1861
BssAI	RCCGGY	2 cut(s)	26, 30
BssECI	CCNNGG	6 cut(s)	149, 619, 924, 1216, 1217, 1241
BssMI	GATC	6 cut(s)	88, 1114, 1150, 1278, 1407, 1490
BssNAI	GTATAC	2 cut(s)	294, 1016
BssNI	GRCGYC	1 cut(s)	24
BssT1I	CCWWGG	2 cut(s)	149, 619
Bst1107I	GTATAC	2 cut(s)	294, 1016
Bst2UI	CCWGG	5 cut(s)	611, 926, 1218, 1390, 1649
Bst6I	CTCTTC	3 cut(s)	332, 717, 1830
BstACI	GRCGYC	1 cut(s)	24
BstAUI	TGTACA	2 cut(s)	1317, 1598
BstBI	TTCGAA	1 cut(s)	1524
BstC8I	GCNNGC	4 cut(s)	28, 105, 171, 265
BstDSI	CCRYGG	2 cut(s)	149, 1241
BstEII	GGTNACC	1 cut(s)	193
BstENI	CCTNNNNNAGG	2 cut(s)	623, 1652
BstF5I	GGATG	4 cut(s)	265, 1087, 1251, 1740
BstFNI	CGCG	1 cut(s)	235
BstHHI	GCGC	3 cut(s)	175, 235, 369
BstKTI	GATC	6 cut(s)	91, 1117, 1153, 1281, 1410, 1493
BstMAI	GTCTC	7 cut(s)	60, 310, 336, 586, 878, 1025, 1379
BstMBI	GATC	6 cut(s)	88, 1114, 1150, 1278, 1407, 1490
BstMCI	CGRYCG	2 cut(s)	31, 1517
BstMWI	GCNNNNNNNGC	8 cut(s)	181, 500, 545, 726, 989, 1064, 1435, 1880
BstNI	CCWGG	5 cut(s)	611, 926, 1218, 1390, 1649
BstNSI	RCATGY	3 cut(s)	1028, 1038, 1771
BstPI	GGTNACC	1 cut(s)	193
BstSCI	CCNGG	6 cut(s)	609, 924, 1216, 1388, 1511, 1647
BstSFI	CTRYAG	2 cut(s)	495, 733
BstUI	CGCG	1 cut(s)	235
BstV1I	GCAGC	2 cut(s)	532, 1863
BstV2I	GAAGAC	2 cut(s)	675, 1617
BstX2I	RGATCY	1 cut(s)	88
BstYI	RGATCY	1 cut(s)	88
BstZ17I	GTATAC	2 cut(s)	294, 1016
BstZI	CGGCCG	2 cut(s)	28, 1514
BsuRI	GGCC	5 cut(s)	30, 148, 169, 1366, 1516
BtgI	CCRYGG	2 cut(s)	149, 1241
BtsCI	GGATG	4 cut(s)	265, 1087, 1251, 1740
BtsI	GCAGTG	1 cut(s)	394
BtsIMutI	CAGTG	7 cut(s)	48, 394, 488, 954, 1048, 1466, 1893
Cac8I	GCNNGC	4 cut(s)	28, 105, 171, 265
CaiI	CAGNNNCTG	2 cut(s)	584, 1047
CfoI	GCGC	3 cut(s)	175, 235, 369
Cfr10I	RCCGGY	2 cut(s)	26, 30
Cfr13I	GGNCC	3 cut(s)	402, 800, 1364
CseI	GACGC	1 cut(s)	32
CsiI	ACCWGGT	2 cut(s)	1388, 1647
Csp6I	GTAC	6 cut(s)	607, 1000, 1075, 1318, 1482, 1599
CviAII	CATG	9 cut(s)	150, 511, 564, 931, 1025, 1035, 1112, 1768, 1836
CviQI	GTAC	6 cut(s)	607, 1000, 1075, 1318, 1482, 1599
DpnI	GATC	6 cut(s)	90, 1116, 1152, 1280, 1409, 1492
DpnII	GATC	6 cut(s)	88, 1114, 1150, 1278, 1407, 1490
DraI	TTTAAA	1 cut(s)	1126
EaeI	YGGCCR	4 cut(s)	28, 146, 167, 1514
EagI	CGGCCG	2 cut(s)	28, 1514
Eam1104I	CTCTTC	3 cut(s)	332, 717, 1830
EarI	CTCTTC	3 cut(s)	332, 717, 1830
Ecl136II	GAGCTC	1 cut(s)	267
EclXI	CGGCCG	2 cut(s)	28, 1514
Eco130I	CCWWGG	2 cut(s)	149, 619
Eco24I	GRGCYC	1 cut(s)	269
Eco31I	GGTCTC	3 cut(s)	310, 878, 1379
Eco47I	GGWCC	2 cut(s)	402, 800
Eco52I	CGGCCG	2 cut(s)	28, 1514
Eco53kI	GAGCTC	1 cut(s)	267
Eco57I	CTGAAG	3 cut(s)	458, 1190, 1854
Eco91I	GGTNACC	1 cut(s)	193
EcoICRI	GAGCTC	1 cut(s)	267
EcoNI	CCTNNNNNAGG	2 cut(s)	623, 1652
EcoO109I	RGGNCCY	1 cut(s)	402
EcoO65I	GGTNACC	1 cut(s)	193
EcoRI	GAATTC	1 cut(s)	524
EcoRII	CCWGG	5 cut(s)	609, 924, 1216, 1388, 1647
EcoT14I	CCWWGG	2 cut(s)	149, 619
EcoT22I	ATGCAT	1 cut(s)	399
EcoT38I	GRGCYC	1 cut(s)	269
ErhI	CCWWGG	2 cut(s)	149, 619
FaeI	CATG	9 cut(s)	153, 514, 567, 934, 1028, 1038, 1115, 1771, 1839
FatI	CATG	9 cut(s)	149, 510, 563, 930, 1024, 1034, 1111, 1767, 1835
FauNDI	CATATG	1 cut(s)	1910
FblI	GTMKAC	2 cut(s)	293, 1015
Fnu4HI	GCNGC	2 cut(s)	546, 1852
FokI	GGATG	4 cut(s)	272, 1094, 1258, 1747
FriOI	GRGCYC	1 cut(s)	269
Fsp4HI	GCNGC	2 cut(s)	546, 1852
FspBI	CTAG	6 cut(s)	297, 620, 768, 894, 1172, 1781
FspI	TGCGCA	1 cut(s)	368
GlaI	GCGC	3 cut(s)	174, 234, 368
GluI	GCNGC	2 cut(s)	546, 1852
GsaI	CCCAGC	1 cut(s)	1182
GsuI	CTGGAG	1 cut(s)	1717
HaeIII	GGCC	5 cut(s)	30, 148, 169, 1366, 1516
HapII	CCGG	4 cut(s)	27, 31, 1156, 1513
HgaI	GACGC	1 cut(s)	32
HhaI	GCGC	3 cut(s)	175, 235, 369
Hin1I	GRCGYC	1 cut(s)	24
Hin1II	CATG	9 cut(s)	153, 514, 567, 934, 1028, 1038, 1115, 1771, 1839
Hin6I	GCGC	3 cut(s)	173, 233, 367
HinP1I	GCGC	3 cut(s)	173, 233, 367
HinfI	GANTC	3 cut(s)	209, 614, 1622
HpaII	CCGG	4 cut(s)	27, 31, 1156, 1513
HphI	GGTGA	2 cut(s)	774, 1288
Hpy166II	GTNNAC	4 cut(s)	139, 294, 1016, 1919
Hpy188III	TCNNGA	8 cut(s)	573, 875, 977, 1087, 1468, 1477, 1696, 1829
Hpy8I	GTNNAC	4 cut(s)	139, 294, 1016, 1919
Hpy99I	CGWCG	1 cut(s)	761
HpyAV	CCTTC	5 cut(s)	807, 1197, 1214, 1444, 1562
HpyF10VI	GCNNNNNNNGC	8 cut(s)	181, 500, 545, 726, 989, 1064, 1435, 1880
Hsp92I	GRCGYC	1 cut(s)	24
Hsp92II	CATG	9 cut(s)	153, 514, 567, 934, 1028, 1038, 1115, 1771, 1839
HspAI	GCGC	3 cut(s)	173, 233, 367
KroI	GCCGGC	1 cut(s)	26
KroNI	GCCGGC	1 cut(s)	28
Kzo9I	GATC	6 cut(s)	88, 1114, 1150, 1278, 1407, 1490
LmnI	GCTCC	5 cut(s)	272, 438, 1590, 1698, 1762
Lsp1109I	GCAGC	2 cut(s)	532, 1863
MabI	ACCWGGT	2 cut(s)	1388, 1647
MaeI	CTAG	6 cut(s)	297, 620, 768, 894, 1172, 1781
MaeIII	GTNAC	9 cut(s)	20, 193, 646, 896, 1037, 1043, 1342, 1399, 2000
MalI	GATC	6 cut(s)	90, 1116, 1152, 1280, 1409, 1492
MboI	GATC	6 cut(s)	88, 1114, 1150, 1278, 1407, 1490
MfeI	CAATTG	2 cut(s)	185, 596
MflI	RGATCY	1 cut(s)	88
MhlI	GDGCHC	2 cut(s)	269, 1957
MlyI	GAGTC	1 cut(s)	1631
MmeI	TCCRAC	1 cut(s)	773
Mph1103I	ATGCAT	1 cut(s)	399
MroNI	GCCGGC	1 cut(s)	26
MseI	TTAA	7 cut(s)	279, 383, 456, 684, 834, 1125, 1970
MspI	CCGG	4 cut(s)	27, 31, 1156, 1513
MspR9I	CCNGG	6 cut(s)	611, 926, 1218, 1390, 1513, 1649
MssI	GTTTAAAC	1 cut(s)	1126
MunI	CAATTG	2 cut(s)	185, 596
Mva1269I	GAATGC	1 cut(s)	1985
MvaI	CCWGG	5 cut(s)	611, 926, 1218, 1390, 1649
MvnI	CGCG	1 cut(s)	235
MwoI	GCNNNNNNNGC	8 cut(s)	181, 500, 545, 726, 989, 1064, 1435, 1880
NaeI	GCCGGC	1 cut(s)	28
NciI	CCSGG	1 cut(s)	1513
NcoI	CCATGG	1 cut(s)	149
NdeI	CATATG	1 cut(s)	1910
NdeII	GATC	6 cut(s)	88, 1114, 1150, 1278, 1407, 1490
NgoMIV	GCCGGC	1 cut(s)	26
NlaIII	CATG	9 cut(s)	153, 514, 567, 934, 1028, 1038, 1115, 1771, 1839
NmeAIII	GCCGAG	1 cut(s)	145
NmuCI	GTSAC	3 cut(s)	20, 896, 1043
NsbI	TGCGCA	1 cut(s)	368
NsiI	ATGCAT	1 cut(s)	399
NspI	RCATGY	3 cut(s)	1028, 1038, 1771
NspV	TTCGAA	1 cut(s)	1524
PasI	CCCWGGG	1 cut(s)	1217
PciI	ACATGT	2 cut(s)	1034, 1767
PcsI	WCGNNNNNNNCGW	1 cut(s)	1530
PctI	GAATGC	1 cut(s)	1985
PdiI	GCCGGC	1 cut(s)	28
PfeI	GAWTC	2 cut(s)	209, 614
PflFI	GACNNNGTC	1 cut(s)	1390
PflMI	CCANNNNNTGG	1 cut(s)	797
PkrI	GCNGC	2 cut(s)	547, 1853
PleI	GAGTC	1 cut(s)	1630
PmeI	GTTTAAAC	1 cut(s)	1126
PpsI	GAGTC	1 cut(s)	1630
PpuMI	RGGWCCY	1 cut(s)	402
PscI	ACATGT	2 cut(s)	1034, 1767
PshBI	ATTAAT	2 cut(s)	456, 834
Psp124BI	GAGCTC	1 cut(s)	269
Psp5II	RGGWCCY	1 cut(s)	402
Psp6I	CCWGG	5 cut(s)	609, 924, 1216, 1388, 1647
PspEI	GGTNACC	1 cut(s)	193
PspFI	CCCAGC	1 cut(s)	1178
PspGI	CCWGG	5 cut(s)	609, 924, 1216, 1388, 1647
PspPI	GGNCC	3 cut(s)	402, 800, 1364
PspPPI	RGGWCCY	1 cut(s)	402
PstNI	CAGNNNCTG	2 cut(s)	584, 1047
PsuI	RGATCY	1 cut(s)	88
PsyI	GACNNNGTC	1 cut(s)	1390
RsaI	GTAC	6 cut(s)	608, 1001, 1076, 1319, 1483, 1600
RsaNI	GTAC	6 cut(s)	607, 1000, 1075, 1318, 1482, 1599
SacI	GAGCTC	1 cut(s)	269
SaqAI	TTAA	7 cut(s)	279, 383, 456, 684, 834, 1125, 1970
SatI	GCNGC	2 cut(s)	546, 1852
Sau3AI	GATC	6 cut(s)	88, 1114, 1150, 1278, 1407, 1490
Sau96I	GGNCC	3 cut(s)	402, 800, 1364
SchI	GAGTC	1 cut(s)	1631
ScrFI	CCNGG	6 cut(s)	611, 926, 1218, 1390, 1513, 1649
SduI	GDGCHC	2 cut(s)	269, 1957
SexAI	ACCWGGT	2 cut(s)	1388, 1647
SfcI	CTRYAG	2 cut(s)	495, 733
SfuI	TTCGAA	1 cut(s)	1524
SinI	GGWCC	2 cut(s)	402, 800
SmlI	CTYRAG	2 cut(s)	540, 1337
SmoI	CTYRAG	2 cut(s)	540, 1337
SpeI	ACTAGT	1 cut(s)	767
SspI	AATATT	1 cut(s)	838
SspMI	CTAG	6 cut(s)	297, 620, 768, 894, 1172, 1781
SstI	GAGCTC	1 cut(s)	269
StyD4I	CCNGG	6 cut(s)	609, 924, 1216, 1388, 1511, 1647
StyI	CCWWGG	2 cut(s)	149, 619
TaqI	TCGA	7 cut(s)	448, 528, 699, 1394, 1489, 1524, 1828
TatI	WGTACW	4 cut(s)	999, 1074, 1317, 1598
TfiI	GAWTC	2 cut(s)	209, 614
Tru1I	TTAA	7 cut(s)	279, 383, 456, 684, 834, 1125, 1970
Tru9I	TTAA	7 cut(s)	279, 383, 456, 684, 834, 1125, 1970
TscAI	CASTG	7 cut(s)	55, 394, 495, 954, 1048, 1466, 1893
TseFI	GTSAC	3 cut(s)	20, 896, 1043
TseI	GCWGC	2 cut(s)	545, 1851
Tsp45I	GTSAC	3 cut(s)	20, 896, 1043
TspDTI	ATGAA	6 cut(s)	301, 406, 499, 552, 947, 1780
TspGWI	ACGGA	1 cut(s)	1940
TspRI	CASTG	7 cut(s)	55, 394, 495, 954, 1048, 1466, 1893
Tth111I	GACNNNGTC	1 cut(s)	1390
Van91I	CCANNNNNTGG	1 cut(s)	797
VpaK11BI	GGWCC	2 cut(s)	402, 800
VspI	ATTAAT	2 cut(s)	456, 834
XagI	CCTNNNNNAGG	2 cut(s)	623, 1652
XapI	RAATTY	6 cut(s)	506, 524, 674, 706, 859, 1230
XceI	RCATGY	3 cut(s)	1028, 1038, 1771
XcmI	CCANNNNNNNNNTGG	1 cut(s)	177
XmaJI	CCTAGG	1 cut(s)	619
XmiI	GTMKAC	2 cut(s)	293, 1015
XspI	CTAG	6 cut(s)	297, 620, 768, 894, 1172, 1781
Zsp2I	ATGCAT	1 cut(s)	399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.