Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0032555.1

Orthogroup ID

OG0005838

Physical Location & Seq

Genomic Coordinates Reverse (-)

2457 .. 9037

Gene Structure 6581 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0032555.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2322 bp

atgaaggttccgctccaacggccttctgggccctaccacgagatctgcggctcagatgaggccaattcgccggagattggtttcatttatgtttatggaattccgttcatcatcatcatcaacaacaacaagtggttggtagtaattggagcatacagcatggttttgacggggaaaagtgacgccggccggtgcattttccccctcactggattgcaaatcggagacttgcaatcgtatctttcggatcttagcttagtgctggcttcggaaagtaggaagttctatattttggtggacaataggccatggctgagaggttctcggccagcgcacttctggcaattgatggttaccaagtcaagggaatctccttttgcaaacactaaagcgcgaaaggacagaaaacaaggaaaggatgcgagctccaagagtgttaaacccaaaaagtatactaggtgggtctcattcatcaaggaagaagcattgtctcggaagagggttttgctacctgtaaagaaactgcgcaattcttttcttttaagcagtgagatgcataggaccttgtatggtttcattgtgtttgaagttgcgtggagcaatgttcgaggtattaattacttgaatgagcttcagactgatacatcactggctacagaggctaaattcatgcaaagatgggaattcgacagtattgctcaagctgcaaactgtatatcttcatggttctcaggaacagtctctgagaagcgacaattgggagagtacctggattccctaggagaggtgttttatgatgcccaagtaactatgccagttgatgttgaagacgaattttcgtttaatcgtctttctatcgaggaaaattctcttcacagcctcagtagcaactatagtgtatgctctccaaccaacgacggtagcactagtgttcctcattcacctcctccacctactggaccttacaagagaaggaaaatagcaaactccattaatattggagatggagttgatgtaaattctgatgagtttcaagatggcgagacctatgctagtgactacgaagatgctgttgaagatacccaggacatgaaagatgatataccagtgaatgtaaagacctatatggacagtcaagaggcttttgatgctactcagtacagggaagatggtatacctgtgcatgttgagacatgtaacagtgactgtgaagatgctgttgaagctactcagtacagtgatgtcttgattttgttcaggttcaatgaccatgatctcccgtttaaactcagggatataataatgtctgatctccggttattgaccttgctagaggctgggcttccttcttgggctatcttccttcagtcttacccagggtttcgcaaaatttatcgcccgtggatgtgtcctcttgcaagagctttatatgtggtgatctcagttgccaccgtcctaattggattttatgacctgtacaaaaatgttccagttctcaaggtaactgcatctcgtatttgtgggcctctatttgattggatagagacctggtcgatggtaacaaggatcaaatacttgggaacaatgctatttctgcatcactctcagaaggttgttcagtggttcttgactatcaggagtaccactcgatcctttttttcagtttttgcccggccgatgttcgaacctttcgtagagtgctttagcttccttctcccagtttggaatgtgttttttgaggtattggggagcatctgtacaatgattttgtttctgattgagtcttcttgcaatatagtggagaacctggtggaggttttactgtttccaatatggtttttcctgtcgtccatctggagcattgccacttctgtcatatatcctatatttgggatgctgtgggcaatactctatgctccaattcacatgtttcttgcactagccaatttcattgcctttctttttacttgtatatatgacactcttcgagaaacatggaagtttattggcagcatattccagtttgcttcagcctctcaggcaacagtgaggactgttgaagtttccatatggcgttcactttggaatgacctcttttcacagattttccgtgctcttaggagtatattaaacggttttgttgcattcttcacagcttgtaacaggcatcggctgagcatctataatcatatacaagagtttaaccaaagattactaaatcgaaccaaaagatcacggcgtgaagattcgagacgtagcaggcagaccattgaggctcagcagctgcagttaaaaatgaggaggaaaattgcccataattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

773

Amino Acids

89.05

Weight (kDa)

7.86

Isoelectric Point (pI)

54.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005838)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32970 AT2G32970 AT2G32970 AT2G32970
fragaria_vesca	FvH4_6g42290 FvH4_6g42290 FvH4_6g42290 FvH4_6g42290 FvH4_6g42290 FvH4_6g42290
malus_domestica	MD09G1113700.v1.1 MD17G1103800.v1.1
prunus_persica	Prupe.3G210900_v2.0.a1 Prupe.3G210900_v2.0.a1 Prupe.3G210900_v2.0.a1 Prupe.3G210900_v2.0.a1
pyrus_communis	pycom17g09790
rosa_chinensis	RchiOBHm_Chr2g0158131
rosa_laevigata	RLG00000021062
rosa_multiflora	Rmu_sc0005982.1_g000008 Rmu_sc0018610.1_g000001 Rmu_sc0032555.1_g000002
rosa_roxburghii	Rroxscaffold_2G00091640
rosa_samantha	Rh2AG532300 Rh2BG546400 Rh2CG516200 Rh2DG554900
rosa_wichuraiana	Rw2G044010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	527
AccB7I	CCANNNNNTGG	1 cut(s)	956
AccBSI	CCGCTC	1 cut(s)	13
AccI	GTMKAC	2 cut(s)	452, 1174
AccII	CGCG	1 cut(s)	394
AciI	CCGC	2 cut(s)	11, 48
AclWI	GGATC	3 cut(s)	255, 1574, 1644
AcoI	YGGCCR	3 cut(s)	187, 326, 1673
AcsI	RAATTY	7 cut(s)	99, 665, 683, 833, 865, 1018, 1389
AcuI	CTGAAG	3 cut(s)	617, 1349, 2013
AcyI	GRCGYC	1 cut(s)	183
AdeI	CACNNNGTG	1 cut(s)	2240
AfaI	GTAC	6 cut(s)	767, 1160, 1235, 1478, 1642, 1759
AfiI	CCNNNNNNNGG	7 cut(s)	77, 209, 363, 784, 956, 1813, 1889
AflIII	ACRYGT	2 cut(s)	1193, 1926
AgsI	TTSAA	8 cut(s)	587, 625, 827, 1034, 1076, 1223, 1264, 2060
AhlI	ACTAGT	1 cut(s)	926
AjnI	CCWGG	5 cut(s)	768, 1083, 1375, 1547, 1806
AjuI	GAANNNNNNNTTGG	2 cut(s)	740, 772
AluBI	AGCT	9 cut(s)	255, 426, 631, 704, 1226, 1424, 1707, 2156, 2284
AluI	AGCT	9 cut(s)	255, 426, 631, 704, 1226, 1424, 1707, 2156, 2284
Alw21I	GWGCWC	2 cut(s)	428, 2116
Alw26I	GTCTC	8 cut(s)	219, 469, 495, 745, 1037, 1184, 1538, 2245
AlwI	GGATC	3 cut(s)	255, 1574, 1644
AlwNI	CAGNNNCTG	3 cut(s)	743, 1206, 2284
AoxI	GGCC	8 cut(s)	20, 29, 60, 187, 305, 326, 1523, 1673
ApaI	GGGCCC	1 cut(s)	33
ApeKI	GCWGC	4 cut(s)	704, 2010, 2281, 2284
ApoI	RAATTY	7 cut(s)	99, 665, 683, 833, 865, 1018, 1389
AseI	ATTAAT	2 cut(s)	615, 993
AspA2I	CCTAGG	1 cut(s)	778
AspLEI	GCGC	3 cut(s)	334, 394, 528
AspS9I	GGNCC	5 cut(s)	29, 30, 561, 959, 1523
AsuC2I	CCSGG	1 cut(s)	1672
AsuHPI	GGTGA	2 cut(s)	933, 1447
AsuII	TTCGAA	1 cut(s)	1683
AvaII	GGWCC	2 cut(s)	561, 959
AvrII	CCTAGG	1 cut(s)	778
BaeGI	GKGCMC	1 cut(s)	33
BanII	GRGCYC	2 cut(s)	33, 428
BarI	GAAGNNNNNNTAC	2 cut(s)	1158, 1190
BauI	CACGAG	1 cut(s)	38
BbsI	GAAGAC	2 cut(s)	834, 1776
Bbv12I	GWGCWC	2 cut(s)	428, 2116
BbvI	GCAGC	4 cut(s)	691, 2022, 2271, 2293
BccI	CCATC	7 cut(s)	343, 672, 998, 1031, 1163, 1549, 1859
BceAI	ACGGC	2 cut(s)	35, 2252
BcgI	CGANNNNNNTGC	4 cut(s)	677, 711, 1031, 1065
BciT130I	CCWGG	5 cut(s)	770, 1085, 1377, 1549, 1808
BcnI	CCSGG	1 cut(s)	1672
BcoDI	GTCTC	8 cut(s)	219, 469, 495, 745, 1037, 1184, 1538, 2245
BcuI	ACTAGT	1 cut(s)	926
BfaI	CTAG	6 cut(s)	456, 779, 927, 1053, 1331, 1940
BfmI	CTRYAG	3 cut(s)	654, 892, 2285
BglI	GCCNNNNNGGC	2 cut(s)	28, 2039
BglII	AGATCT	1 cut(s)	42
BisI	GCNGC	5 cut(s)	49, 705, 2011, 2282, 2285
BlnI	CCTAGG	1 cut(s)	778
BlpI	GCTNAGC	2 cut(s)	2174, 2277
BlsI	GCNGC	5 cut(s)	50, 706, 2012, 2283, 2286
Bme1390I	CCNGG	6 cut(s)	770, 1085, 1377, 1549, 1672, 1808
Bme18I	GGWCC	2 cut(s)	561, 959
BmgT120I	GGNCC	5 cut(s)	29, 30, 561, 959, 1523
BmiI	GGNNCC	2 cut(s)	9, 31
BmrFI	CCNGG	6 cut(s)	770, 1085, 1377, 1549, 1672, 1808
BmrI	ACTGGG	1 cut(s)	1712
BmuI	ACTGGG	1 cut(s)	1712
BpiI	GAAGAC	2 cut(s)	834, 1776
BplI	GAGNNNNNCTC	4 cut(s)	307, 339, 1630, 1662
BpmI	CTGGAG	1 cut(s)	1876
Bpu1102I	GCTNAGC	2 cut(s)	2174, 2277
Bpu14I	TTCGAA	1 cut(s)	1683
BpuEI	CTTGAG	2 cut(s)	684, 1481
BpuMI	CCSGG	1 cut(s)	1672
BsaHI	GRCGYC	1 cut(s)	183
BsaI	GGTCTC	3 cut(s)	469, 1037, 1538
BsaJI	CCNNGG	6 cut(s)	308, 778, 1083, 1375, 1376, 1400
BsaWI	WCCGGW	1 cut(s)	1314
BsaXI	ACNNNNNCTCC	6 cut(s)	993, 999, 1023, 1029, 1741, 1771
Bsc4I	CCNNNNNNNGG	7 cut(s)	77, 209, 363, 784, 956, 1813, 1889
Bse118I	RCCGGY	2 cut(s)	185, 189
Bse1I	ACTGG	8 cut(s)	214, 654, 815, 961, 1106, 1490, 1718, 2020
Bse3DI	GCAATG	3 cut(s)	607, 1860, 1950
BseBI	CCWGG	5 cut(s)	770, 1085, 1377, 1549, 1808
BseDI	CCNNGG	6 cut(s)	308, 778, 1083, 1375, 1376, 1400
BseGI	GGATG	3 cut(s)	424, 1410, 1899
BseLI	CCNNNNNNNGG	7 cut(s)	77, 209, 363, 784, 956, 1813, 1889
BseMI	GCAATG	3 cut(s)	607, 1860, 1950
BseNI	ACTGG	8 cut(s)	214, 654, 815, 961, 1106, 1490, 1718, 2020
BseRI	GAGGAG	2 cut(s)	936, 2314
BseSI	GKGCMC	1 cut(s)	33
BseX3I	CGGCCG	2 cut(s)	187, 1673
BseXI	GCAGC	4 cut(s)	691, 2022, 2271, 2293
BseYI	CCCAGC	1 cut(s)	1337
Bsh1236I	CGCG	1 cut(s)	394
Bsh1285I	CGRYCG	2 cut(s)	190, 1676
BshFI	GGCC	8 cut(s)	22, 31, 62, 189, 307, 328, 1525, 1675
BsiEI	CGRYCG	2 cut(s)	190, 1676
BsiHKAI	GWGCWC	2 cut(s)	428, 2116
BsiSI	CCGG	5 cut(s)	71, 186, 190, 1315, 1672
BslI	CCNNNNNNNGG	7 cut(s)	77, 209, 363, 784, 956, 1813, 1889
BsmAI	GTCTC	8 cut(s)	219, 469, 495, 745, 1037, 1184, 1538, 2245
BsmBI	CGTCTC	1 cut(s)	2245
BsmI	GAATGC	1 cut(s)	2144
BsnI	GGCC	8 cut(s)	22, 31, 62, 189, 307, 328, 1525, 1675
Bso31I	GGTCTC	3 cut(s)	469, 1037, 1538
Bsp119I	TTCGAA	1 cut(s)	1683
Bsp120I	GGGCCC	1 cut(s)	29
Bsp1286I	GDGCHC	3 cut(s)	33, 428, 2116
Bsp1407I	TGTACA	2 cut(s)	1476, 1757
Bsp143I	GATC	8 cut(s)	42, 247, 1273, 1309, 1437, 1566, 1649, 2231
Bsp1720I	GCTNAGC	2 cut(s)	2174, 2277
Bsp19I	CCATGG	1 cut(s)	308
BspACI	CCGC	2 cut(s)	11, 48
BspANI	GGCC	8 cut(s)	22, 31, 62, 189, 307, 328, 1525, 1675
BspFNI	CGCG	1 cut(s)	394
BspLI	GGNNCC	2 cut(s)	9, 31
BspMAI	CTGCAG	1 cut(s)	2289
BspPI	GGATC	3 cut(s)	255, 1574, 1644
BspT104I	TTCGAA	1 cut(s)	1683
BspTNI	GGTCTC	3 cut(s)	469, 1037, 1538
BsrBI	CCGCTC	1 cut(s)	13
BsrDI	GCAATG	3 cut(s)	607, 1860, 1950
BsrFI	RCCGGY	2 cut(s)	185, 189
BsrGI	TGTACA	2 cut(s)	1476, 1757
BsrI	ACTGG	8 cut(s)	214, 654, 815, 961, 1106, 1490, 1718, 2020
BssAI	RCCGGY	2 cut(s)	185, 189
BssECI	CCNNGG	6 cut(s)	308, 778, 1083, 1375, 1376, 1400
BssMI	GATC	8 cut(s)	42, 247, 1273, 1309, 1437, 1566, 1649, 2231
BssNAI	GTATAC	2 cut(s)	453, 1175
BssNI	GRCGYC	1 cut(s)	183
BssSI	CACGAG	1 cut(s)	38
BssT1I	CCWWGG	2 cut(s)	308, 778
Bst1107I	GTATAC	2 cut(s)	453, 1175
Bst2BI	CACGAG	1 cut(s)	38
Bst2UI	CCWGG	5 cut(s)	770, 1085, 1377, 1549, 1808
Bst6I	CTCTTC	3 cut(s)	491, 876, 1989
BstACI	GRCGYC	1 cut(s)	183
BstAUI	TGTACA	2 cut(s)	1476, 1757
BstBI	TTCGAA	1 cut(s)	1683
BstC8I	GCNNGC	5 cut(s)	187, 264, 330, 424, 2261
BstDSI	CCRYGG	2 cut(s)	308, 1400
BstEII	GGTNACC	1 cut(s)	352
BstENI	CCTNNNNNAGG	2 cut(s)	782, 1811
BstF5I	GGATG	3 cut(s)	424, 1410, 1899
BstFNI	CGCG	1 cut(s)	394
BstHHI	GCGC	3 cut(s)	334, 394, 528
BstKTI	GATC	8 cut(s)	45, 250, 1276, 1312, 1440, 1569, 1652, 2234
BstMAI	GTCTC	8 cut(s)	219, 469, 495, 745, 1037, 1184, 1538, 2245
BstMBI	GATC	8 cut(s)	42, 247, 1273, 1309, 1437, 1566, 1649, 2231
BstMCI	CGRYCG	2 cut(s)	190, 1676
BstNI	CCWGG	5 cut(s)	770, 1085, 1377, 1549, 1808
BstNSI	RCATGY	3 cut(s)	1187, 1197, 1930
BstPI	GGTNACC	1 cut(s)	352
BstSCI	CCNGG	6 cut(s)	768, 1083, 1375, 1547, 1670, 1806
BstSFI	CTRYAG	3 cut(s)	654, 892, 2285
BstSLI	GKGCMC	1 cut(s)	33
BstUI	CGCG	1 cut(s)	394
BstV1I	GCAGC	4 cut(s)	691, 2022, 2271, 2293
BstV2I	GAAGAC	2 cut(s)	834, 1776
BstX2I	RGATCY	2 cut(s)	42, 247
BstYI	RGATCY	2 cut(s)	42, 247
BstZ17I	GTATAC	2 cut(s)	453, 1175
BstZI	CGGCCG	2 cut(s)	187, 1673
BsuRI	GGCC	8 cut(s)	22, 31, 62, 189, 307, 328, 1525, 1675
BtgI	CCRYGG	2 cut(s)	308, 1400
BtsCI	GGATG	3 cut(s)	424, 1410, 1899
BtsI	GCAGTG	1 cut(s)	553
BtsIMutI	CAGTG	8 cut(s)	207, 553, 647, 1113, 1207, 1243, 1625, 2052
Cac8I	GCNNGC	5 cut(s)	187, 264, 330, 424, 2261
CaiI	CAGNNNCTG	3 cut(s)	743, 1206, 2284
CfoI	GCGC	3 cut(s)	334, 394, 528
Cfr10I	RCCGGY	2 cut(s)	185, 189
Cfr13I	GGNCC	5 cut(s)	29, 30, 561, 959, 1523
CseI	GACGC	1 cut(s)	191
CsiI	ACCWGGT	2 cut(s)	1547, 1806
Csp6I	GTAC	6 cut(s)	766, 1159, 1234, 1477, 1641, 1758
CviQI	GTAC	6 cut(s)	766, 1159, 1234, 1477, 1641, 1758
DpnI	GATC	8 cut(s)	44, 249, 1275, 1311, 1439, 1568, 1651, 2233
DpnII	GATC	8 cut(s)	42, 247, 1273, 1309, 1437, 1566, 1649, 2231
DraI	TTTAAA	1 cut(s)	1285
DraIII	CACNNNGTG	1 cut(s)	2240
EaeI	YGGCCR	3 cut(s)	187, 326, 1673
EagI	CGGCCG	2 cut(s)	187, 1673
Eam1104I	CTCTTC	3 cut(s)	491, 876, 1989
EarI	CTCTTC	3 cut(s)	491, 876, 1989
Ecl136II	GAGCTC	1 cut(s)	426
EclXI	CGGCCG	2 cut(s)	187, 1673
Eco130I	CCWWGG	2 cut(s)	308, 778
Eco24I	GRGCYC	2 cut(s)	33, 428
Eco31I	GGTCTC	3 cut(s)	469, 1037, 1538
Eco47I	GGWCC	2 cut(s)	561, 959
Eco52I	CGGCCG	2 cut(s)	187, 1673
Eco53kI	GAGCTC	1 cut(s)	426
Eco57I	CTGAAG	3 cut(s)	617, 1349, 2013
Eco91I	GGTNACC	1 cut(s)	352
EcoICRI	GAGCTC	1 cut(s)	426
EcoNI	CCTNNNNNAGG	2 cut(s)	782, 1811
EcoO109I	RGGNCCY	2 cut(s)	30, 561
EcoO65I	GGTNACC	1 cut(s)	352
EcoRI	GAATTC	2 cut(s)	99, 683
EcoRII	CCWGG	5 cut(s)	768, 1083, 1375, 1547, 1806
EcoT14I	CCWWGG	2 cut(s)	308, 778
EcoT22I	ATGCAT	1 cut(s)	558
EcoT38I	GRGCYC	2 cut(s)	33, 428
ErhI	CCWWGG	2 cut(s)	308, 778
Esp3I	CGTCTC	1 cut(s)	2245
FauNDI	CATATG	1 cut(s)	2069
FblI	GTMKAC	2 cut(s)	452, 1174
Fnu4HI	GCNGC	5 cut(s)	49, 705, 2011, 2282, 2285
FokI	GGATG	3 cut(s)	431, 1417, 1906
FriOI	GRGCYC	2 cut(s)	33, 428
Fsp4HI	GCNGC	5 cut(s)	49, 705, 2011, 2282, 2285
FspBI	CTAG	6 cut(s)	456, 779, 927, 1053, 1331, 1940
FspI	TGCGCA	1 cut(s)	527
GlaI	GCGC	3 cut(s)	333, 393, 527
GluI	GCNGC	5 cut(s)	49, 705, 2011, 2282, 2285
GsaI	CCCAGC	1 cut(s)	1341
GsuI	CTGGAG	1 cut(s)	1876
HaeIII	GGCC	8 cut(s)	22, 31, 62, 189, 307, 328, 1525, 1675
HapII	CCGG	5 cut(s)	71, 186, 190, 1315, 1672
HgaI	GACGC	1 cut(s)	191
HhaI	GCGC	3 cut(s)	334, 394, 528
Hin1I	GRCGYC	1 cut(s)	183
Hin6I	GCGC	3 cut(s)	332, 392, 526
HinP1I	GCGC	3 cut(s)	332, 392, 526
HinfI	GANTC	4 cut(s)	368, 773, 1781, 2246
HpaII	CCGG	5 cut(s)	71, 186, 190, 1315, 1672
HphI	GGTGA	2 cut(s)	933, 1447
Hpy166II	GTNNAC	4 cut(s)	298, 453, 1175, 2078
Hpy188III	TCNNGA	9 cut(s)	732, 1034, 1136, 1246, 1627, 1636, 1855, 1988, 2250
Hpy8I	GTNNAC	4 cut(s)	298, 453, 1175, 2078
Hpy99I	CGWCG	1 cut(s)	920
HpyAV	CCTTC	6 cut(s)	33, 966, 1356, 1373, 1603, 1721
HpyCH4IV	ACGT	1 cut(s)	2254
HpySE526I	ACGT	1 cut(s)	2254
Hsp92I	GRCGYC	1 cut(s)	183
HspAI	GCGC	3 cut(s)	332, 392, 526
KroI	GCCGGC	1 cut(s)	185
KroNI	GCCGGC	1 cut(s)	187
Kzo9I	GATC	8 cut(s)	42, 247, 1273, 1309, 1437, 1566, 1649, 2231
LmnI	GCTCC	7 cut(s)	18, 149, 431, 597, 1749, 1857, 1921
Lsp1109I	GCAGC	4 cut(s)	691, 2022, 2271, 2293
MabI	ACCWGGT	2 cut(s)	1547, 1806
MaeI	CTAG	6 cut(s)	456, 779, 927, 1053, 1331, 1940
MaeII	ACGT	1 cut(s)	2254
MaeIII	GTNAC	9 cut(s)	179, 352, 805, 1055, 1196, 1202, 1501, 1558, 2159
MalI	GATC	8 cut(s)	44, 249, 1275, 1311, 1439, 1568, 1651, 2233
MbiI	CCGCTC	1 cut(s)	13
MboI	GATC	8 cut(s)	42, 247, 1273, 1309, 1437, 1566, 1649, 2231
MfeI	CAATTG	2 cut(s)	344, 755
MflI	RGATCY	2 cut(s)	42, 247
MhlI	GDGCHC	3 cut(s)	33, 428, 2116
MlyI	GAGTC	1 cut(s)	1790
MmeI	TCCRAC	2 cut(s)	40, 932
Mph1103I	ATGCAT	1 cut(s)	558
MroNI	GCCGGC	1 cut(s)	185
MseI	TTAA	9 cut(s)	438, 542, 615, 843, 993, 1284, 2129, 2202, 2291
MspA1I	CMGCKG	1 cut(s)	2284
MspI	CCGG	5 cut(s)	71, 186, 190, 1315, 1672
MspR9I	CCNGG	6 cut(s)	770, 1085, 1377, 1549, 1672, 1808
MssI	GTTTAAAC	1 cut(s)	1285
MunI	CAATTG	2 cut(s)	344, 755
Mva1269I	GAATGC	1 cut(s)	2144
MvaI	CCWGG	5 cut(s)	770, 1085, 1377, 1549, 1808
MvnI	CGCG	1 cut(s)	394
NaeI	GCCGGC	1 cut(s)	187
NciI	CCSGG	1 cut(s)	1672
NcoI	CCATGG	1 cut(s)	308
NdeI	CATATG	1 cut(s)	2069
NdeII	GATC	8 cut(s)	42, 247, 1273, 1309, 1437, 1566, 1649, 2231
NgoMIV	GCCGGC	1 cut(s)	185
NlaIV	GGNNCC	2 cut(s)	9, 31
NmeAIII	GCCGAG	1 cut(s)	304
NmuCI	GTSAC	3 cut(s)	179, 1055, 1202
NsbI	TGCGCA	1 cut(s)	527
NsiI	ATGCAT	1 cut(s)	558
NspI	RCATGY	3 cut(s)	1187, 1197, 1930
NspV	TTCGAA	1 cut(s)	1683
PasI	CCCWGGG	1 cut(s)	1376
PciI	ACATGT	2 cut(s)	1193, 1926
PcsI	WCGNNNNNNNCGW	1 cut(s)	1689
PctI	GAATGC	1 cut(s)	2144
PdiI	GCCGGC	1 cut(s)	187
PfeI	GAWTC	3 cut(s)	368, 773, 2246
PflFI	GACNNNGTC	1 cut(s)	1549
PflMI	CCANNNNNTGG	1 cut(s)	956
PkrI	GCNGC	5 cut(s)	50, 706, 2012, 2283, 2286
PleI	GAGTC	1 cut(s)	1789
PmeI	GTTTAAAC	1 cut(s)	1285
PpsI	GAGTC	1 cut(s)	1789
PpuMI	RGGWCCY	1 cut(s)	561
PscI	ACATGT	2 cut(s)	1193, 1926
PshBI	ATTAAT	2 cut(s)	615, 993
Psp124BI	GAGCTC	1 cut(s)	428
Psp5II	RGGWCCY	1 cut(s)	561
Psp6I	CCWGG	5 cut(s)	768, 1083, 1375, 1547, 1806
PspEI	GGTNACC	1 cut(s)	352
PspFI	CCCAGC	1 cut(s)	1337
PspGI	CCWGG	5 cut(s)	768, 1083, 1375, 1547, 1806
PspN4I	GGNNCC	2 cut(s)	9, 31
PspOMI	GGGCCC	1 cut(s)	29
PspPI	GGNCC	5 cut(s)	29, 30, 561, 959, 1523
PspPPI	RGGWCCY	1 cut(s)	561
PstI	CTGCAG	1 cut(s)	2289
PstNI	CAGNNNCTG	3 cut(s)	743, 1206, 2284
PsuI	RGATCY	2 cut(s)	42, 247
PsyI	GACNNNGTC	1 cut(s)	1549
PvuII	CAGCTG	1 cut(s)	2284
RsaI	GTAC	6 cut(s)	767, 1160, 1235, 1478, 1642, 1759
RsaNI	GTAC	6 cut(s)	766, 1159, 1234, 1477, 1641, 1758
SacI	GAGCTC	1 cut(s)	428
SaqAI	TTAA	9 cut(s)	438, 542, 615, 843, 993, 1284, 2129, 2202, 2291
SatI	GCNGC	5 cut(s)	49, 705, 2011, 2282, 2285
Sau3AI	GATC	8 cut(s)	42, 247, 1273, 1309, 1437, 1566, 1649, 2231
Sau96I	GGNCC	5 cut(s)	29, 30, 561, 959, 1523
SchI	GAGTC	1 cut(s)	1790
ScrFI	CCNGG	6 cut(s)	770, 1085, 1377, 1549, 1672, 1808
SduI	GDGCHC	3 cut(s)	33, 428, 2116
SexAI	ACCWGGT	2 cut(s)	1547, 1806
SfcI	CTRYAG	3 cut(s)	654, 892, 2285
SfiI	GGCCNNNNNGGCC	1 cut(s)	28
SfuI	TTCGAA	1 cut(s)	1683
SinI	GGWCC	2 cut(s)	561, 959
SmlI	CTYRAG	2 cut(s)	699, 1496
SmoI	CTYRAG	2 cut(s)	699, 1496
SpeI	ACTAGT	1 cut(s)	926
SsiI	CCGC	2 cut(s)	11, 48
SspI	AATATT	1 cut(s)	997
SspMI	CTAG	6 cut(s)	456, 779, 927, 1053, 1331, 1940
SstI	GAGCTC	1 cut(s)	428
StyD4I	CCNGG	6 cut(s)	768, 1083, 1375, 1547, 1670, 1806
StyI	CCWWGG	2 cut(s)	308, 778
TaiI	ACGT	1 cut(s)	2257
TaqI	TCGA	9 cut(s)	607, 687, 858, 1553, 1648, 1683, 1987, 2221, 2249
TatI	WGTACW	4 cut(s)	1158, 1233, 1476, 1757
TauI	GCSGC	1 cut(s)	51
TfiI	GAWTC	3 cut(s)	368, 773, 2246
Tru1I	TTAA	9 cut(s)	438, 542, 615, 843, 993, 1284, 2129, 2202, 2291
Tru9I	TTAA	9 cut(s)	438, 542, 615, 843, 993, 1284, 2129, 2202, 2291
TscAI	CASTG	8 cut(s)	214, 553, 654, 1113, 1207, 1243, 1625, 2052
TseFI	GTSAC	3 cut(s)	179, 1055, 1202
TseI	GCWGC	4 cut(s)	704, 2010, 2281, 2284
Tsp45I	GTSAC	3 cut(s)	179, 1055, 1202
TspDTI	ATGAA	9 cut(s)	17, 73, 97, 460, 565, 658, 711, 1106, 1939
TspGWI	ACGGA	2 cut(s)	93, 2099
TspRI	CASTG	8 cut(s)	214, 553, 654, 1113, 1207, 1243, 1625, 2052
Tth111I	GACNNNGTC	1 cut(s)	1549
Van91I	CCANNNNNTGG	1 cut(s)	956
VpaK11BI	GGWCC	2 cut(s)	561, 959
VspI	ATTAAT	2 cut(s)	615, 993
XagI	CCTNNNNNAGG	2 cut(s)	782, 1811
XapI	RAATTY	7 cut(s)	99, 665, 683, 833, 865, 1018, 1389
XceI	RCATGY	3 cut(s)	1187, 1197, 1930
XcmI	CCANNNNNNNNNTGG	2 cut(s)	23, 336
XmaJI	CCTAGG	1 cut(s)	778
XmiI	GTMKAC	2 cut(s)	452, 1174
XspI	CTAG	6 cut(s)	456, 779, 927, 1053, 1331, 1940
Zsp2I	ATGCAT	1 cut(s)	558

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.