Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003725

Physical Location & Seq

Genomic Coordinates Reverse (-)

14718195 .. 14721271

Gene Structure 3077 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G34890.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGAAGTACGTACTTGTAACAGGAGGTGTTGTGAGTGGATTAGGGAAAGGAATCACTGCAAGCAGTGTTGGTGTCCTTCTTCAGTCTTGTGGTCTTCGCGTTACTTGTATCAAAATCGATCCGTATTTGAACTATGATGCTGGAACCATATCCCCTTACGAACATGGAGAAGTGTTTGTCTTGGACGATGGTAGTGAGGTGGATCTTGATCTTGGAAACTACGAGAGGTTTCTAGATACAACATTAACTCGAGATAACAATATCACTTACGGGAAGATTCAGCGGTATGTGATGGAGAAAGAGAGGAAAGGAGATTACTTAGGGGAAACTGTTCAGATTGTTCCTCACGTCACTGATACAATCCGAGAATGGGTGGAGAGAGTTGCAATGATTCCTGTCGATGGAAAAGAAGGTCCTCCTGATGTTTGCATCATTGAGTTAGGTGGAACTATAGGAGATAATGAATCCAGGCCTTTTGCTGACGCACTTAGCCAATTATCATACAGTGTAGGCCGTGAGAATTTCTGTCTGATCCATGTCACCCTCGTGCCTGTGCTCAGTGTTGTTGGTGAACAGAAAACAAAACCAACACAGCACAGTATTAAAGATCTACGAGGCTTTGGTTTGACACCTAATATCATAGCTTGTCGGAGCACAAAGGCACTTGAAGAGAATGTAAAAGCAAAGCTATCTCGGTTTTGCTATGTTCCGATTCAGAACATCTTCTCTCTCTGTGATGTTCCCAACATCTGGCACATTCCTCTGTTGCTCAAGGAGCAGAAGGCTCATGAAGCAATTTCAAAAGTCCTGAACCTTTCTGGTATTGCTAAAGAACCTTCTTTAGAGAAATGGGCATCAATGGTAGAAATTAGTGACGGTTTAAATGTACCCGTGAGAATCGCTATCGTGGGGAAATATACAGATCTATCAGATGCCTATCTCTCTGTCTTGAAGGCCCTCCTCCATGCTTCTGTGGCTTTTCACAAAAAGCTTGAAGTTGATATGGTTCCATCGTGTGATCTCGAAAAGACCAAGAAGCAAGAGGATTCACGCGCATATGAGGCTGCTTGGAAGTTACTGAAGGACGCAAATGGAGTTCTTCTCCCTGGAGGGTTTGGTGATAGGGGAGTGGAGGGGATGATTCTTGCAGCAAAATATGCCCGAGAAAACAATATCCCTTTCCTCGGTATCTGTCTCGGGATGCAGATCGCTGTCATCGAGTTTGCACGCTCACTTCTCTGCTTGCCTGATGCAAATAGCACAGAGTTTGAACCTGAAACCAAACATCCATGCATCATATTCATGCCTGAGGGCTCCATAACTCATATGGGAGGCACAATGCGATTAGGTTCGAGAAGAGCCTATTTCCATGACAAGGAAAGCAAATCTGCAAGACTATATGGGAACAAAGAGTTTGTCGATGAAAGGCATCGCCATAGATATGAGGTGAATCCTGATATGGTTGCAAGCCTTGAACAGGCTGGTCTCTCTTTTGCTGCAAAAGATGAAACTGGGGAGCGCATGGAGATTGTTGAACTTCCAAGCCACCCTTTCTTCATCGGTGCTCAATTTCATCCCGAGTACAAATCGAGACCCAGGAAAGTATCTCCTCTGTTCTTAGGACTAATAGCAGCATCCTGTGGTGAGCTAGATGCAGTCCTGAATCCAGTTTCCATTCACCAACACAACCAAACAATGTTCTTGGAAAAGAAACAACACATAGGTTGGTCCAAAAAATGTTTTGGTGATAAAAACCAACAAGAAGAAATCTCAGAAACATCTTTTCCTATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003883 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006241 GO:0006629 GO:0006644 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009141 GO:0009142 GO:0009147 GO:0009148 GO:0009163 GO:0009165 GO:0009199 GO:0009201 GO:0009208 GO:0009209 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016874 GO:0016879 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019856 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044271 GO:0044281 GO:0044283 GO:0046036 GO:0046112 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00240 ko01100 map00240 map01100

Pfam Domains

Protein Families

CTP_synth_N GATase

Protein Analysis

597

Amino Acids

66.37

Weight (kDa)

5.95

Isoelectric Point (pI)

36.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CTP_synth_N	PF06418	2 - 272	2.2e-117	CTP synthase N-terminus
GATase	PF00117	309 - 543	2.2e-42	Glutamine amidotransferase class-I

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003725)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30820 AT2G34890 AT4G20320 AT4G20320 AT4G20320 AT4G20320 AT4G20320 AT4G20320
fragaria_vesca	FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530
malus_domestica	MD00G1085100.v1.1 MD10G1221000.v1.1
prunus_persica	Prupe.4G123500_v2.0.a1 Prupe.4G123500_v2.0.a1 Prupe.4G123500_v2.0.a1 Prupe.4G123500_v2.0.a1
pyrus_communis	pycom05g21790 pycom10g18670
rosa_chinensis	RchiOBHm_Chr5g0022491
rosa_laevigata	RLG00000032665
rosa_multiflora	Rmu_sc0001514.1_g000012
rosa_roxburghii	Rroxscaffold_1G00056550
rosa_rugosa	Rorug05G0074200
rosa_samantha	Rh5AG161000 Rh5CG174300 Rh5DG160600
rosa_wichuraiana	Rw5G014350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	750
AccII	CGCG	2 cut(s)	99, 1053
AciI	CCGC	1 cut(s)	283
AclWI	GGATC	3 cut(s)	113, 210, 526
AcsI	RAATTY	1 cut(s)	520
AcuI	CTGAAG	2 cut(s)	65, 1100
AfaI	GTAC	4 cut(s)	8, 12, 888, 1583
AfiI	CCNNNNNNNGG	6 cut(s)	370, 401, 750, 1184, 1375, 1477
AgsI	TTSAA	8 cut(s)	130, 668, 801, 952, 995, 1271, 1475, 1535
AjiI	CACGTC	1 cut(s)	349
AjnI	CCWGG	3 cut(s)	467, 1105, 1595
AleI	CACNNNNGTG	1 cut(s)	545
AluBI	AGCT	4 cut(s)	644, 688, 991, 1648
AluI	AGCT	4 cut(s)	644, 688, 991, 1648
Alw21I	GWGCWC	3 cut(s)	558, 656, 1567
Alw26I	GTCTC	3 cut(s)	1199, 1490, 1585
AlwI	GGATC	3 cut(s)	113, 210, 526
Ama87I	CYCGRG	4 cut(s)	249, 1161, 1196, 1577
AoxI	GGCC	3 cut(s)	470, 511, 954
ApeKI	GCWGC	4 cut(s)	1064, 1148, 1496, 1631
ApoI	RAATTY	1 cut(s)	520
ArsI	GACNNNNNNTTYG	2 cut(s)	1401, 1433
Asp700I	GAANNNNTTC	2 cut(s)	330, 722
AspLEI	GCGC	2 cut(s)	1055, 1521
AspS9I	GGNCC	3 cut(s)	413, 955, 1728
AsuHPI	GGTGA	7 cut(s)	532, 581, 1130, 1459, 1655, 1670, 1757
AvaI	CYCGRG	4 cut(s)	249, 1161, 1196, 1577
AvaII	GGWCC	2 cut(s)	413, 1728
AxyI	CCTNAGG	1 cut(s)	1308
BanII	GRGCYC	1 cut(s)	1316
BauI	CACGAG	1 cut(s)	545
BbsI	GAAGAC	1 cut(s)	86
Bbv12I	GWGCWC	3 cut(s)	558, 656, 1567
BbvI	GCAGC	4 cut(s)	1051, 1160, 1483, 1643
BccI	CCATC	4 cut(s)	182, 286, 395, 1018
BceAI	ACGGC	1 cut(s)	498
BciT130I	CCWGG	3 cut(s)	469, 1107, 1597
BcoDI	GTCTC	3 cut(s)	1199, 1490, 1585
BfaI	CTAG	2 cut(s)	233, 1649
BfmI	CTRYAG	1 cut(s)	450
BglII	AGATCT	2 cut(s)	607, 922
BisI	GCNGC	4 cut(s)	1065, 1149, 1497, 1632
BlsI	GCNGC	4 cut(s)	1066, 1150, 1498, 1633
Bme1390I	CCNGG	3 cut(s)	469, 1107, 1597
Bme18I	GGWCC	2 cut(s)	413, 1728
BmeT110I	CYCGRG	4 cut(s)	249, 1161, 1196, 1577
BmgBI	CACGTC	1 cut(s)	349
BmgT120I	GGNCC	3 cut(s)	413, 955, 1728
BmiI	GGNNCC	3 cut(s)	145, 1008, 1315
BmrFI	CCNGG	3 cut(s)	469, 1107, 1597
BmrI	ACTGGG	1 cut(s)	1521
BmuI	ACTGGG	1 cut(s)	1521
BpiI	GAAGAC	1 cut(s)	86
BplI	GAGNNNNNCTC	2 cut(s)	1086, 1118
BpmI	CTGGAG	1 cut(s)	1128
BpuEI	CTTGAG	1 cut(s)	755
Bsa29I	ATCGAT	1 cut(s)	117
BsaAI	YACGTR	1 cut(s)	10
BsaBI	GATNNNNATC	3 cut(s)	207, 936, 1205
BsaI	GGTCTC	2 cut(s)	1490, 1585
BsaJI	CCNNGG	3 cut(s)	1105, 1183, 1595
BsaXI	ACNNNNNCTCC	2 cut(s)	15, 45
Bsc4I	CCNNNNNNNGG	6 cut(s)	370, 401, 750, 1184, 1375, 1477
Bse1I	ACTGG	2 cut(s)	1516, 1667
Bse21I	CCTNAGG	1 cut(s)	1308
Bse3DI	GCAATG	1 cut(s)	393
Bse8I	GATNNNNATC	3 cut(s)	207, 936, 1205
BseBI	CCWGG	3 cut(s)	469, 1107, 1597
BseCI	ATCGAT	1 cut(s)	117
BseDI	CCNNGG	3 cut(s)	1105, 1183, 1595
BseGI	GGATG	5 cut(s)	1143, 1206, 1285, 1573, 1634
BseJI	GATNNNNATC	3 cut(s)	207, 936, 1205
BseLI	CCNNNNNNNGG	6 cut(s)	370, 401, 750, 1184, 1375, 1477
BseMI	GCAATG	1 cut(s)	393
BseMII	CTCAG	3 cut(s)	571, 1299, 1785
BseNI	ACTGG	2 cut(s)	1516, 1667
BseRI	GAGGAG	2 cut(s)	950, 1599
BseXI	GCAGC	4 cut(s)	1051, 1160, 1483, 1643
Bsh1236I	CGCG	2 cut(s)	99, 1053
BshFI	GGCC	3 cut(s)	472, 513, 956
BshVI	ATCGAT	1 cut(s)	117
BsiHKAI	GWGCWC	3 cut(s)	558, 656, 1567
BsiHKCI	CYCGRG	4 cut(s)	249, 1161, 1196, 1577
BslI	CCNNNNNNNGG	6 cut(s)	370, 401, 750, 1184, 1375, 1477
BsmAI	GTCTC	3 cut(s)	1199, 1490, 1585
BsnI	GGCC	3 cut(s)	472, 513, 956
Bso31I	GGTCTC	2 cut(s)	1490, 1585
BsoBI	CYCGRG	4 cut(s)	249, 1161, 1196, 1577
Bsp1286I	GDGCHC	4 cut(s)	558, 656, 1316, 1567
Bsp143I	GATC	8 cut(s)	118, 202, 208, 531, 607, 922, 1018, 1206
BspACI	CCGC	1 cut(s)	283
BspANI	GGCC	3 cut(s)	472, 513, 956
BspCNI	CTCAG	3 cut(s)	570, 1300, 1784
BspDI	ATCGAT	1 cut(s)	117
BspFNI	CGCG	2 cut(s)	99, 1053
BspHI	TCATGA	1 cut(s)	787
BspLI	GGNNCC	3 cut(s)	145, 1008, 1315
BspPI	GGATC	3 cut(s)	113, 210, 526
BspQI	GCTCTTC	1 cut(s)	1351
BspTNI	GGTCTC	2 cut(s)	1490, 1585
BsrDI	GCAATG	1 cut(s)	393
BsrI	ACTGG	2 cut(s)	1516, 1667
BssECI	CCNNGG	3 cut(s)	1105, 1183, 1595
BssMI	GATC	8 cut(s)	118, 202, 208, 531, 607, 922, 1018, 1206
BssSI	CACGAG	1 cut(s)	545
Bst2BI	CACGAG	1 cut(s)	545
Bst2UI	CCWGG	3 cut(s)	469, 1107, 1597
Bst4CI	ACNGT	4 cut(s)	331, 506, 599, 878
Bst6I	CTCTTC	2 cut(s)	663, 1351
BstAPI	GCANNNNNTGC	1 cut(s)	1157
BstBAI	YACGTR	1 cut(s)	10
BstC8I	GCNNGC	4 cut(s)	61, 1228, 1244, 1468
BstDEI	CTNAG	6 cut(s)	319, 488, 557, 1308, 1618, 1771
BstENI	CCTNNNNNAGG	1 cut(s)	1475
BstF5I	GGATG	5 cut(s)	1143, 1206, 1285, 1573, 1634
BstFNI	CGCG	2 cut(s)	99, 1053
BstHHI	GCGC	2 cut(s)	1055, 1521
BstKTI	GATC	8 cut(s)	121, 205, 211, 534, 610, 925, 1021, 1209
BstMAI	GTCTC	3 cut(s)	1199, 1490, 1585
BstMBI	GATC	8 cut(s)	118, 202, 208, 531, 607, 922, 1018, 1206
BstMWI	GCNNNNNNNGC	5 cut(s)	775, 791, 974, 1061, 1157
BstNI	CCWGG	3 cut(s)	469, 1107, 1597
BstSCI	CCNGG	3 cut(s)	467, 1105, 1595
BstSFI	CTRYAG	1 cut(s)	450
BstSNI	TACGTA	1 cut(s)	10
BstUI	CGCG	2 cut(s)	99, 1053
BstV1I	GCAGC	4 cut(s)	1051, 1160, 1483, 1643
BstV2I	GAAGAC	1 cut(s)	86
BstX2I	RGATCY	3 cut(s)	202, 607, 922
BstYI	RGATCY	3 cut(s)	202, 607, 922
Bsu15I	ATCGAT	1 cut(s)	117
Bsu36I	CCTNAGG	1 cut(s)	1308
BsuRI	GGCC	3 cut(s)	472, 513, 956
BsuTUI	ATCGAT	1 cut(s)	117
BtgZI	GCGATG	1 cut(s)	1415
BtrI	CACGTC	1 cut(s)	349
BtsCI	GGATG	5 cut(s)	1143, 1206, 1285, 1573, 1634
BtsI	GCAGTG	2 cut(s)	54, 70
BtsIMutI	CAGTG	5 cut(s)	54, 70, 351, 511, 565
Cac8I	GCNNGC	4 cut(s)	61, 1228, 1244, 1468
CciI	TCATGA	1 cut(s)	787
CfoI	GCGC	2 cut(s)	1055, 1521
Cfr13I	GGNCC	3 cut(s)	413, 955, 1728
ClaI	ATCGAT	1 cut(s)	117
CseI	GACGC	2 cut(s)	491, 1094
Csp6I	GTAC	4 cut(s)	7, 11, 887, 1582
CviAII	CATG	8 cut(s)	164, 536, 788, 965, 1290, 1303, 1370, 1522
CviQI	GTAC	4 cut(s)	7, 11, 887, 1582
DdeI	CTNAG	6 cut(s)	319, 488, 557, 1308, 1618, 1771
DpnI	GATC	8 cut(s)	120, 204, 210, 533, 609, 924, 1020, 1208
DpnII	GATC	8 cut(s)	118, 202, 208, 531, 607, 922, 1018, 1206
DraI	TTTAAA	1 cut(s)	882
Eam1104I	CTCTTC	2 cut(s)	663, 1351
EarI	CTCTTC	2 cut(s)	663, 1351
Eco105I	TACGTA	1 cut(s)	10
Eco147I	AGGCCT	1 cut(s)	472
Eco24I	GRGCYC	1 cut(s)	1316
Eco31I	GGTCTC	2 cut(s)	1490, 1585
Eco47I	GGWCC	2 cut(s)	413, 1728
Eco57I	CTGAAG	2 cut(s)	65, 1100
Eco81I	CCTNAGG	1 cut(s)	1308
Eco88I	CYCGRG	4 cut(s)	249, 1161, 1196, 1577
EcoNI	CCTNNNNNAGG	1 cut(s)	1475
EcoO109I	RGGNCCY	2 cut(s)	413, 955
EcoRII	CCWGG	3 cut(s)	467, 1105, 1595
EcoT22I	ATGCAT	1 cut(s)	1295
EcoT38I	GRGCYC	1 cut(s)	1316
FaeI	CATG	8 cut(s)	167, 539, 791, 968, 1293, 1306, 1373, 1525
FalI	AAGNNNNNCTT	2 cut(s)	1534, 1566
FatI	CATG	8 cut(s)	163, 535, 787, 964, 1289, 1302, 1369, 1521
FauNDI	CATATG	2 cut(s)	1057, 1326
Fnu4HI	GCNGC	4 cut(s)	1065, 1149, 1497, 1632
FokI	GGATG	5 cut(s)	1150, 1213, 1272, 1560, 1621
FriOI	GRGCYC	1 cut(s)	1316
Fsp4HI	GCNGC	4 cut(s)	1065, 1149, 1497, 1632
FspBI	CTAG	2 cut(s)	233, 1649
GlaI	GCGC	2 cut(s)	1054, 1520
GluI	GCNGC	4 cut(s)	1065, 1149, 1497, 1632
GsuI	CTGGAG	1 cut(s)	1128
HaeIII	GGCC	3 cut(s)	472, 513, 956
HgaI	GACGC	2 cut(s)	491, 1094
HhaI	GCGC	2 cut(s)	1055, 1521
Hin1II	CATG	8 cut(s)	167, 539, 791, 968, 1293, 1306, 1373, 1525
Hin6I	GCGC	2 cut(s)	1053, 1519
HinP1I	GCGC	2 cut(s)	1053, 1519
HindIII	AAGCTT	1 cut(s)	989
HphI	GGTGA	7 cut(s)	532, 581, 1130, 1459, 1655, 1670, 1757
Hpy166II	GTNNAC	1 cut(s)	572
Hpy188I	TCNGA	8 cut(s)	336, 365, 531, 651, 711, 717, 931, 1774
Hpy8I	GTNNAC	1 cut(s)	572
HpyAV	CCTTC	6 cut(s)	86, 404, 775, 846, 946, 1075
HpyCH4III	ACNGT	4 cut(s)	331, 506, 599, 878
HpyCH4IV	ACGT	2 cut(s)	9, 348
HpyF10VI	GCNNNNNNNGC	5 cut(s)	775, 791, 974, 1061, 1157
HpyF3I	CTNAG	6 cut(s)	319, 488, 557, 1308, 1618, 1771
HpySE526I	ACGT	2 cut(s)	9, 348
Hsp92II	CATG	8 cut(s)	167, 539, 791, 968, 1293, 1306, 1373, 1525
HspAI	GCGC	2 cut(s)	1053, 1519
Kzo9I	GATC	8 cut(s)	118, 202, 208, 531, 607, 922, 1018, 1206
LguI	GCTCTTC	1 cut(s)	1351
LmnI	GCTCC	4 cut(s)	651, 775, 1319, 1516
Lsp1109I	GCAGC	4 cut(s)	1051, 1160, 1483, 1643
MaeI	CTAG	2 cut(s)	233, 1649
MaeII	ACGT	2 cut(s)	9, 348
MaeIII	GTNAC	6 cut(s)	16, 100, 349, 538, 872, 1074
MalI	GATC	8 cut(s)	120, 204, 210, 533, 609, 924, 1020, 1208
MboI	GATC	8 cut(s)	118, 202, 208, 531, 607, 922, 1018, 1206
MboII	GAAGA	9 cut(s)	71, 86, 286, 680, 715, 1091, 1368, 1546, 1775
MflI	RGATCY	3 cut(s)	202, 607, 922
MhlI	GDGCHC	4 cut(s)	558, 656, 1316, 1567
MluCI	AATT	5 cut(s)	494, 520, 795, 867, 1568
MmeI	TCCRAC	1 cut(s)	629
Mph1103I	ATGCAT	1 cut(s)	1295
MroXI	GAANNNNTTC	2 cut(s)	330, 722
MseI	TTAA	3 cut(s)	245, 603, 881
MslI	CAYNNNNRTG	3 cut(s)	545, 1301, 1440
MspA1I	CMGCKG	1 cut(s)	283
MspR9I	CCNGG	3 cut(s)	469, 1107, 1597
MvaI	CCWGG	3 cut(s)	469, 1107, 1597
MvnI	CGCG	2 cut(s)	99, 1053
MwoI	GCNNNNNNNGC	5 cut(s)	775, 791, 974, 1061, 1157
NdeI	CATATG	2 cut(s)	1057, 1326
NdeII	GATC	8 cut(s)	118, 202, 208, 531, 607, 922, 1018, 1206
NlaIII	CATG	8 cut(s)	167, 539, 791, 968, 1293, 1306, 1373, 1525
NlaIV	GGNNCC	3 cut(s)	145, 1008, 1315
NmuCI	GTSAC	3 cut(s)	349, 538, 872
NsiI	ATGCAT	1 cut(s)	1295
OliI	CACNNNNGTG	1 cut(s)	545
PaeR7I	CTCGAG	1 cut(s)	249
PagI	TCATGA	1 cut(s)	787
PceI	AGGCCT	1 cut(s)	472
PciSI	GCTCTTC	1 cut(s)	1351
PcsI	WCGNNNNNNNCGW	1 cut(s)	1215
PdmI	GAANNNNTTC	2 cut(s)	330, 722
PflMI	CCANNNNNTGG	1 cut(s)	750
PkrI	GCNGC	4 cut(s)	1066, 1150, 1498, 1633
Ppu21I	YACGTR	1 cut(s)	10
PpuMI	RGGWCCY	1 cut(s)	413
Psp5II	RGGWCCY	1 cut(s)	413
Psp6I	CCWGG	3 cut(s)	467, 1105, 1595
PspGI	CCWGG	3 cut(s)	467, 1105, 1595
PspN4I	GGNNCC	3 cut(s)	145, 1008, 1315
PspPI	GGNCC	3 cut(s)	413, 955, 1728
PspPPI	RGGWCCY	1 cut(s)	413
PsuI	RGATCY	3 cut(s)	202, 607, 922
RsaI	GTAC	4 cut(s)	8, 12, 888, 1583
RsaNI	GTAC	4 cut(s)	7, 11, 887, 1582
RseI	CAYNNNNRTG	3 cut(s)	545, 1301, 1440
SapI	GCTCTTC	1 cut(s)	1351
SaqAI	TTAA	3 cut(s)	245, 603, 881
SatI	GCNGC	4 cut(s)	1065, 1149, 1497, 1632
Sau3AI	GATC	8 cut(s)	118, 202, 208, 531, 607, 922, 1018, 1206
Sau96I	GGNCC	3 cut(s)	413, 955, 1728
ScrFI	CCNGG	3 cut(s)	469, 1107, 1597
SduI	GDGCHC	4 cut(s)	558, 656, 1316, 1567
SfcI	CTRYAG	1 cut(s)	450
Sfr274I	CTCGAG	1 cut(s)	249
SinI	GGWCC	2 cut(s)	413, 1728
SlaI	CTCGAG	1 cut(s)	249
SmiMI	CAYNNNNRTG	3 cut(s)	545, 1301, 1440
SmlI	CTYRAG	2 cut(s)	249, 770
SmoI	CTYRAG	2 cut(s)	249, 770
SnaBI	TACGTA	1 cut(s)	10
Sse9I	AATT	5 cut(s)	494, 520, 795, 867, 1568
SseBI	AGGCCT	1 cut(s)	472
SsiI	CCGC	1 cut(s)	283
SspMI	CTAG	2 cut(s)	233, 1649
StuI	AGGCCT	1 cut(s)	472
StyD4I	CCNGG	3 cut(s)	467, 1105, 1595
TaaI	ACNGT	4 cut(s)	331, 506, 599, 878
TaiI	ACGT	2 cut(s)	12, 351
TaqI	TCGA	8 cut(s)	117, 250, 399, 1023, 1218, 1352, 1419, 1589
TasI	AATT	5 cut(s)	494, 520, 795, 867, 1568
TatI	WGTACW	1 cut(s)	1581
Tru1I	TTAA	3 cut(s)	245, 603, 881
Tru9I	TTAA	3 cut(s)	245, 603, 881
TscAI	CASTG	5 cut(s)	61, 70, 358, 511, 565
TseFI	GTSAC	3 cut(s)	349, 538, 872
TseI	GCWGC	4 cut(s)	1064, 1148, 1496, 1631
Tsp45I	GTSAC	3 cut(s)	349, 538, 872
TspDTI	ATGAA	8 cut(s)	17, 477, 804, 1291, 1437, 1521, 1546, 1562
TspGWI	ACGGA	1 cut(s)	111
TspRI	CASTG	5 cut(s)	61, 70, 358, 511, 565
Van91I	CCANNNNNTGG	1 cut(s)	750
VpaK11BI	GGWCC	2 cut(s)	413, 1728
XagI	CCTNNNNNAGG	1 cut(s)	1475
XapI	RAATTY	1 cut(s)	520
XbaI	TCTAGA	1 cut(s)	232
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1324
XhoI	CTCGAG	1 cut(s)	249
XmnI	GAANNNNTTC	2 cut(s)	330, 722
XspI	CTAG	2 cut(s)	233, 1649
Zsp2I	ATGCAT	1 cut(s)	1295

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.