Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0003725

Physical Location & Seq

Genomic Coordinates Forward (+)

6733023 .. 6739911

Gene Structure 6889 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G123500.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

ATGAAGTACGTTTTGGTGACTGGTGGAGTTGTGAGTGGTCTTGGGAAAGGAGTGACTGCTAGTAGTATTGGCTTGCTTCTAAAGGCTTGTGGGCTTCGGGTCACTTCCATTAAGATTGATCCTTACTTAAACACTGATGCTGGAACTATGTCCCCTGTTGAACATGGTGAAGTCTTTGTCTTAGATGATGGTGGTGAGGTGGACTTGGACCTTGGAAACTATGAGCGATTTCTAGATATCAAGCTGACCCGTGATAATAATATTACTACCGGAAAGATTTACCAGGATGTTATTGACAGAGAAAGAAGGGGAGATTATCTAGGAAAAACTGTCCAGGTTGTTCCTCACATCACAGATGCTATCCAAGAGTGGATTGAGCGTGTAGCACAAATACCAGTGGATGGGGAGTCAGGTCCAGCTGATGTTTGTGTCATAGAATTGGGTGGAACTATAGGTGATATTGAATCCATGCCTTTTATTGAGGCATTAGGACAATTCTCGTACCGTGTAGGTAGTCACAACTTTTGCTTGATTCATGTTAGCCTTGTGCCTGTTTTGAATGTTGTTGGTGAACAGAAAACAAAACCAACCCAGCACAGTGTTCGTGGACTGAGGTGCCTGGGTTTGACACCACATTTGATAGCTTGTCGCAGCACAACGGCACTAGAAGAGAACGTAAAGACGAAAGTCAGTCAGTTTTGCCATGTCCAGAAAGAGAACATCATCACTCTCTACGATGTTTCAAACATCTGGCACATTCCATTACTTTTAAGAGATCAGAAGGCTCATGAAGCAATCTTTAAAGTGCTGAACCTTCAGGGATTAACAAGGGAACCTGAATTAGAGGAATGGACTTCTAGGGCTGAAATTTGTGACATGTTGCATGAGCCGGTTCGCATTGCCATGGTCGGGAAGTATACGAGGCTTTCAGATGCCTACCTCTCTGTAATAAAGGCTCTTGTGCATGCTTCTGTTGCTCGTGGCAAGAAACTTTTCGTGGATTGGGTTCCAGCTGGTGACCTTGAAGACGCAACTGCAAAAGAGAATCCTGATGCTTATAAAGCTGCCTGGAAGTTGTTGAAGGGTGCAGATGGTGTTCTCGTTCCCGGAGGATTCGGGGACAGAGGAGTGCAAGGGAAAATTCTTGCAGCAAAATATGCCCGGGAAAAGAGAATTCCATTCCTTGGCATTTGTCTAGGAATGCAGATTGCTGTCATTGAGTTTGCACGATCTGTTCTTGGTCTGAAAGATGCTAACAGCACAGAATTTGATCCTAACACTAAGAATCCCTGTGTTATATTTATGCCAGAGGGTTCAACAACACATATGGGAGCCACCATGCGCCTTGGATCCAGGAGAACATATTTCCAGTCTACAGAATGCAAATCAGCTAAACTATATGGAAACAAGCGCTTCATCGATGAGAGACATCGACACAGATATGAGGTGAATCCTGAAATGGTAGCACGCCTTGAAAATGCTGGCCTCTCTTTCACTGGCAAGGATGAAACTGGCCAACGCATGGAGATTGTTGAGCTGCGTAATCATCCATATTTCATTGGTGTCCAGTTCCATCCTGAATTCAAATCAAGACCAGGAAAACCTTCTGCTTTATTCATAGGCCTTATAGCAGCAGCATGTGGGCAGTTGGATGCTTTCTTACCGGGCTCTGAGAGCAAAAGGAATATCCCAAATGGACCTGCCAATGATATGTCCCAGAGGAATATCCCATACGGAGCAAGCAATGATATGCCCCAAAGAAATATCCCAAATGGAGCAAGCAATCATATGTTCCAAGCAGCATGTGGGCAGTTGGAATCTTTCTTCCAGGGTTCTGAGACCAAAAGAAATGTCCCAAATGGAGCAGCCAAAGCATATCAAAATGGAGCTGCAACTAAGCTTGCTAATCGGCCACAAGACAGTGCATACAGCATTTTCAATGGCATGCACTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003883 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006241 GO:0006629 GO:0006644 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009141 GO:0009142 GO:0009147 GO:0009148 GO:0009163 GO:0009165 GO:0009199 GO:0009201 GO:0009208 GO:0009209 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016874 GO:0016879 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019856 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044271 GO:0044281 GO:0044283 GO:0046036 GO:0046112 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00240 ko01100 map00240 map01100

Pfam Domains

Protein Families

CTP_synth_N GATase

Protein Analysis

652

Amino Acids

71.64

Weight (kDa)

7.59

Isoelectric Point (pI)

41.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003725)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30820 AT2G34890 AT4G20320 AT4G20320 AT4G20320 AT4G20320 AT4G20320 AT4G20320
fragaria_vesca	FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530
malus_domestica	MD00G1085100.v1.1 MD10G1221000.v1.1
prunus_persica	Prupe.4G123500_v2.0.a1 Prupe.4G123500_v2.0.a1 Prupe.4G123500_v2.0.a1 Prupe.4G123500_v2.0.a1
pyrus_communis	pycom05g21790 pycom10g18670
rosa_chinensis	RchiOBHm_Chr5g0022491
rosa_laevigata	RLG00000032665
rosa_multiflora	Rmu_sc0001514.1_g000012
rosa_roxburghii	Rroxscaffold_1G00056550
rosa_rugosa	Rorug05G0074200
rosa_samantha	Rh5AG161000 Rh5CG174300 Rh5DG160600
rosa_wichuraiana	Rw5G014350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1059
Acc36I	ACCTGC	1 cut(s)	1708
AccB1I	GGYRCC	1 cut(s)	615
AccB7I	CCANNNNNTGG	3 cut(s)	401, 1184, 1522
AccI	GTMKAC	2 cut(s)	917, 1373
AclWI	GGATC	4 cut(s)	113, 1265, 1344, 1357
AcoI	YGGCCR	2 cut(s)	1513, 1910
AcsI	RAATTY	5 cut(s)	867, 1140, 1173, 1265, 1580
AcuI	CTGAAG	1 cut(s)	800
AfaI	GTAC	2 cut(s)	8, 503
AfeI	AGCGCT	1 cut(s)	1412
AfiI	CCNNNNNNNGG	4 cut(s)	401, 909, 1184, 1522
AflIII	ACRYGT	1 cut(s)	876
AjnI	CCWGG	7 cut(s)	282, 333, 618, 1067, 1352, 1594, 1827
AjuI	GAANNNNNNNTTGG	1 cut(s)	28
AluBI	AGCT	9 cut(s)	244, 419, 644, 1013, 1064, 1391, 1537, 1889, 1900
AluI	AGCT	9 cut(s)	244, 419, 644, 1013, 1064, 1391, 1537, 1889, 1900
Alw26I	GTCTC	2 cut(s)	1420, 1832
AlwI	GGATC	4 cut(s)	113, 1265, 1344, 1357
Ama87I	CYCGRG	1 cut(s)	1161
Aor51HI	AGCGCT	1 cut(s)	1412
AoxI	GGCC	4 cut(s)	1483, 1513, 1621, 1910
ApeKI	GCWGC	9 cut(s)	651, 1064, 1148, 1537, 1631, 1634, 1799, 1865, 1889
ApoI	RAATTY	5 cut(s)	867, 1140, 1173, 1265, 1580
ArsI	GACNNNNNNTTYG	4 cut(s)	619, 651, 1836, 1868
Asp700I	GAANNNNTTC	2 cut(s)	992, 1603
AspLEI	GCGC	2 cut(s)	1344, 1413
AspS9I	GGNCC	3 cut(s)	208, 413, 1697
AsuC2I	CCSGG	4 cut(s)	1107, 1162, 1163, 1665
AsuHPI	GGTGA	7 cut(s)	28, 179, 206, 467, 581, 1028, 1459
AvaI	CYCGRG	1 cut(s)	1161
AvaII	GGWCC	3 cut(s)	208, 413, 1697
BalI	TGGCCA	1 cut(s)	1515
BamHI	GGATCC	1 cut(s)	1349
BanI	GGYRCC	1 cut(s)	615
BanII	GRGCYC	1 cut(s)	1670
BauI	CACGAG	1 cut(s)	978
BbsI	GAAGAC	1 cut(s)	1032
BbvI	GCAGC	9 cut(s)	663, 1051, 1160, 1524, 1643, 1646, 1811, 1876, 1877
BccI	CCATC	4 cut(s)	182, 395, 1085, 1581
BceAI	ACGGC	1 cut(s)	675
BcgI	CGANNNNNNTGC	2 cut(s)	584, 618
BciT130I	CCWGG	7 cut(s)	284, 335, 620, 1069, 1354, 1596, 1829
BcnI	CCSGG	4 cut(s)	1107, 1162, 1163, 1665
BcoDI	GTCTC	2 cut(s)	1420, 1832
BfaI	CTAG	6 cut(s)	60, 233, 320, 665, 858, 1196
BfmI	CTRYAG	2 cut(s)	450, 1374
BfoI	RGCGCY	1 cut(s)	1414
BfuAI	ACCTGC	1 cut(s)	1708
BisI	GCNGC	9 cut(s)	652, 1065, 1149, 1538, 1632, 1635, 1800, 1866, 1890
BlsI	GCNGC	9 cut(s)	653, 1066, 1150, 1539, 1633, 1636, 1801, 1867, 1891
Bme18I	GGWCC	3 cut(s)	208, 413, 1697
BmeT110I	CYCGRG	1 cut(s)	1161
BmgT120I	GGNCC	3 cut(s)	208, 413, 1697
BmiI	GGNNCC	5 cut(s)	617, 834, 1008, 1333, 1351
BmsI	GCATC	6 cut(s)	127, 346, 922, 1042, 1240, 1642
BoxI	GACNNNNGTC	1 cut(s)	686
BpiI	GAAGAC	1 cut(s)	1032
BpuMI	CCSGG	4 cut(s)	1107, 1162, 1163, 1665
Bsa29I	ATCGAT	1 cut(s)	1419
BsaI	GGTCTC	1 cut(s)	1832
BsaJI	CCNNGG	7 cut(s)	211, 619, 903, 1161, 1183, 1345, 1828
BsaWI	WCCGGW	1 cut(s)	269
Bsc4I	CCNNNNNNNGG	4 cut(s)	401, 909, 1184, 1522
Bse118I	RCCGGY	1 cut(s)	889
Bse1I	ACTGG	6 cut(s)	25, 395, 1369, 1501, 1516, 1567
Bse3DI	GCAATG	2 cut(s)	897, 1750
BseBI	CCWGG	7 cut(s)	284, 335, 620, 1069, 1354, 1596, 1829
BseCI	ATCGAT	1 cut(s)	1419
BseDI	CCNNGG	7 cut(s)	211, 619, 903, 1161, 1183, 1345, 1828
BseGI	GGATG	6 cut(s)	292, 406, 1510, 1546, 1573, 1657
BseLI	CCNNNNNNNGG	4 cut(s)	401, 909, 1184, 1522
BseMI	GCAATG	2 cut(s)	897, 1750
BseMII	CTCAG	3 cut(s)	602, 1662, 1827
BseNI	ACTGG	6 cut(s)	25, 395, 1369, 1501, 1516, 1567
BseRI	GAGGAG	1 cut(s)	1140
BseXI	GCAGC	9 cut(s)	663, 1051, 1160, 1524, 1643, 1646, 1811, 1876, 1877
BseYI	CCCAGC	1 cut(s)	591
BsgI	GTGCAG	1 cut(s)	1107
BshFI	GGCC	4 cut(s)	1485, 1515, 1623, 1912
BshNI	GGYRCC	1 cut(s)	615
BshVI	ATCGAT	1 cut(s)	1419
BsiHKCI	CYCGRG	1 cut(s)	1161
BsiSI	CCGG	5 cut(s)	270, 890, 1107, 1162, 1664
BslFI	GGGAC	4 cut(s)	136, 1133, 1699, 1838
BslI	CCNNNNNNNGG	4 cut(s)	401, 909, 1184, 1522
BsmAI	GTCTC	2 cut(s)	1420, 1832
BsmFI	GGGAC	4 cut(s)	136, 1133, 1699, 1838
BsmI	GAATGC	2 cut(s)	1206, 1385
BsnI	GGCC	4 cut(s)	1485, 1515, 1623, 1912
Bso31I	GGTCTC	1 cut(s)	1832
BsoBI	CYCGRG	1 cut(s)	1161
Bsp1286I	GDGCHC	1 cut(s)	1670
Bsp143I	GATC	5 cut(s)	118, 775, 1229, 1270, 1349
Bsp19I	CCATGG	1 cut(s)	903
BspANI	GGCC	4 cut(s)	1485, 1515, 1623, 1912
BspCNI	CTCAG	3 cut(s)	603, 1663, 1828
BspDI	ATCGAT	1 cut(s)	1419
BspHI	TCATGA	1 cut(s)	787
BspLI	GGNNCC	5 cut(s)	617, 834, 1008, 1333, 1351
BspMI	ACCTGC	1 cut(s)	1708
BspPI	GGATC	4 cut(s)	113, 1265, 1344, 1357
BspT107I	GGYRCC	1 cut(s)	615
BspTNI	GGTCTC	1 cut(s)	1832
BsrDI	GCAATG	2 cut(s)	897, 1750
BsrFI	RCCGGY	1 cut(s)	889
BsrI	ACTGG	6 cut(s)	25, 395, 1369, 1501, 1516, 1567
BssAI	RCCGGY	1 cut(s)	889
BssECI	CCNNGG	7 cut(s)	211, 619, 903, 1161, 1183, 1345, 1828
BssMI	GATC	5 cut(s)	118, 775, 1229, 1270, 1349
BssNAI	GTATAC	1 cut(s)	918
BssSI	CACGAG	1 cut(s)	978
BssT1I	CCWWGG	4 cut(s)	211, 903, 1183, 1345
Bst1107I	GTATAC	1 cut(s)	918
Bst2BI	CACGAG	1 cut(s)	978
Bst2UI	CCWGG	7 cut(s)	284, 335, 620, 1069, 1354, 1596, 1829
Bst4CI	ACNGT	4 cut(s)	331, 506, 599, 1922
Bst6I	CTCTTC	1 cut(s)	663
BstAPI	GCANNNNNTGC	1 cut(s)	1157
BstC8I	GCNNGC	8 cut(s)	74, 966, 1468, 1483, 1741, 1780, 1902, 1946
BstDEI	CTNAG	6 cut(s)	181, 611, 1281, 1671, 1836, 1896
BstDSI	CCRYGG	1 cut(s)	903
BstEII	GGTNACC	1 cut(s)	1016
BstF5I	GGATG	6 cut(s)	292, 406, 1510, 1546, 1573, 1657
BstH2I	RGCGCY	1 cut(s)	1414
BstHHI	GCGC	2 cut(s)	1344, 1413
BstKTI	GATC	5 cut(s)	121, 778, 1232, 1273, 1352
BstMAI	GTCTC	2 cut(s)	1420, 1832
BstMBI	GATC	5 cut(s)	118, 775, 1229, 1270, 1349
BstMWI	GCNNNNNNNGC	6 cut(s)	791, 974, 1061, 1157, 1674, 1871
BstNI	CCWGG	7 cut(s)	284, 335, 620, 1069, 1354, 1596, 1829
BstNSI	RCATGY	5 cut(s)	880, 968, 1641, 1806, 1948
BstPAI	GACNNNNGTC	1 cut(s)	686
BstPI	GGTNACC	1 cut(s)	1016
BstSFI	CTRYAG	2 cut(s)	450, 1374
BstV1I	GCAGC	9 cut(s)	663, 1051, 1160, 1524, 1643, 1646, 1811, 1876, 1877
BstV2I	GAAGAC	1 cut(s)	1032
BstX2I	RGATCY	1 cut(s)	1349
BstYI	RGATCY	1 cut(s)	1349
BstZ17I	GTATAC	1 cut(s)	918
Bsu15I	ATCGAT	1 cut(s)	1419
BsuRI	GGCC	4 cut(s)	1485, 1515, 1623, 1912
BsuTUI	ATCGAT	1 cut(s)	1419
BtgI	CCRYGG	1 cut(s)	903
BtsCI	GGATG	6 cut(s)	292, 406, 1510, 1546, 1573, 1657
BtsIMutI	CAGTG	5 cut(s)	132, 402, 604, 1494, 1927
BveI	ACCTGC	1 cut(s)	1708
Cac8I	GCNNGC	8 cut(s)	74, 966, 1468, 1483, 1741, 1780, 1902, 1946
CciI	TCATGA	1 cut(s)	787
CfoI	GCGC	2 cut(s)	1344, 1413
Cfr10I	RCCGGY	1 cut(s)	889
Cfr13I	GGNCC	3 cut(s)	208, 413, 1697
Cfr9I	CCCGGG	1 cut(s)	1161
ClaI	ATCGAT	1 cut(s)	1419
CseI	GACGC	1 cut(s)	1037
Csp6I	GTAC	2 cut(s)	7, 502
CviQI	GTAC	2 cut(s)	7, 502
DdeI	CTNAG	6 cut(s)	181, 611, 1281, 1671, 1836, 1896
DpnI	GATC	5 cut(s)	120, 777, 1231, 1272, 1351
DpnII	GATC	5 cut(s)	118, 775, 1229, 1270, 1349
DraI	TTTAAA	1 cut(s)	802
EaeI	YGGCCR	2 cut(s)	1513, 1910
Eam1104I	CTCTTC	1 cut(s)	663
EarI	CTCTTC	1 cut(s)	663
Eco130I	CCWWGG	4 cut(s)	211, 903, 1183, 1345
Eco147I	AGGCCT	1 cut(s)	1623
Eco24I	GRGCYC	1 cut(s)	1670
Eco31I	GGTCTC	1 cut(s)	1832
Eco32I	GATATC	1 cut(s)	238
Eco47I	GGWCC	3 cut(s)	208, 413, 1697
Eco47III	AGCGCT	1 cut(s)	1412
Eco57I	CTGAAG	1 cut(s)	800
Eco88I	CYCGRG	1 cut(s)	1161
Eco91I	GGTNACC	1 cut(s)	1016
EcoO65I	GGTNACC	1 cut(s)	1016
EcoRI	GAATTC	2 cut(s)	1173, 1580
EcoRII	CCWGG	7 cut(s)	282, 333, 618, 1067, 1352, 1594, 1827
EcoRV	GATATC	1 cut(s)	238
EcoT14I	CCWWGG	4 cut(s)	211, 903, 1183, 1345
EcoT38I	GRGCYC	1 cut(s)	1670
ErhI	CCWWGG	4 cut(s)	211, 903, 1183, 1345
FaqI	GGGAC	4 cut(s)	136, 1133, 1699, 1838
FauNDI	CATATG	2 cut(s)	1326, 1788
FblI	GTMKAC	2 cut(s)	917, 1373
Fnu4HI	GCNGC	9 cut(s)	652, 1065, 1149, 1538, 1632, 1635, 1800, 1866, 1890
FokI	GGATG	6 cut(s)	299, 413, 1517, 1533, 1560, 1664
FriOI	GRGCYC	1 cut(s)	1670
Fsp4HI	GCNGC	9 cut(s)	652, 1065, 1149, 1538, 1632, 1635, 1800, 1866, 1890
FspBI	CTAG	6 cut(s)	60, 233, 320, 665, 858, 1196
GlaI	GCGC	2 cut(s)	1343, 1412
GluI	GCNGC	9 cut(s)	652, 1065, 1149, 1538, 1632, 1635, 1800, 1866, 1890
GsaI	CCCAGC	1 cut(s)	595
HaeII	RGCGCY	1 cut(s)	1414
HaeIII	GGCC	4 cut(s)	1485, 1515, 1623, 1912
HapII	CCGG	5 cut(s)	270, 890, 1107, 1162, 1664
HgaI	GACGC	1 cut(s)	1037
HhaI	GCGC	2 cut(s)	1344, 1413
Hin6I	GCGC	2 cut(s)	1342, 1411
HinP1I	GCGC	2 cut(s)	1342, 1411
HindIII	AAGCTT	1 cut(s)	1898
HinfI	GANTC	8 cut(s)	407, 464, 532, 1045, 1113, 1285, 1450, 1817
HpaII	CCGG	5 cut(s)	270, 890, 1107, 1162, 1664
HphI	GGTGA	7 cut(s)	28, 179, 206, 467, 581, 1028, 1459
Hpy166II	GTNNAC	5 cut(s)	202, 572, 608, 918, 1374
Hpy188I	TCNGA	5 cut(s)	780, 931, 1245, 1672, 1837
Hpy188III	TCNNGA	8 cut(s)	233, 709, 788, 910, 1049, 1454, 1577, 1590
Hpy8I	GTNNAC	5 cut(s)	202, 572, 608, 918, 1374
HpyAV	CCTTC	5 cut(s)	300, 775, 824, 1075, 1614
HpyCH4III	ACNGT	4 cut(s)	331, 506, 599, 1922
HpyCH4IV	ACGT	2 cut(s)	9, 675
HpyF10VI	GCNNNNNNNGC	6 cut(s)	791, 974, 1061, 1157, 1674, 1871
HpyF3I	CTNAG	6 cut(s)	181, 611, 1281, 1671, 1836, 1896
HpySE526I	ACGT	2 cut(s)	9, 675
HspAI	GCGC	2 cut(s)	1342, 1411
Kzo9I	GATC	5 cut(s)	118, 775, 1229, 1270, 1349
LmnI	GCTCC	5 cut(s)	1331, 1736, 1775, 1862, 1886
Lsp1109I	GCAGC	9 cut(s)	663, 1051, 1160, 1524, 1643, 1646, 1811, 1876, 1877
LweI	GCATC	6 cut(s)	127, 346, 922, 1042, 1240, 1642
MaeI	CTAG	6 cut(s)	60, 233, 320, 665, 858, 1196
MaeII	ACGT	2 cut(s)	9, 675
MaeIII	GTNAC	6 cut(s)	16, 52, 100, 515, 872, 1016
MalI	GATC	5 cut(s)	120, 777, 1231, 1272, 1351
MboI	GATC	5 cut(s)	118, 775, 1229, 1270, 1349
MboII	GAAGA	3 cut(s)	680, 1037, 1816
MflI	RGATCY	1 cut(s)	1349
MhlI	GDGCHC	1 cut(s)	1670
MlsI	TGGCCA	1 cut(s)	1515
MluCI	AATT	8 cut(s)	437, 494, 839, 867, 1140, 1173, 1265, 1580
MluNI	TGGCCA	1 cut(s)	1515
MlyI	GAGTC	1 cut(s)	416
MmeI	TCCRAC	2 cut(s)	1629, 1794
Mox20I	TGGCCA	1 cut(s)	1515
MroXI	GAANNNNTTC	2 cut(s)	992, 1603
MscI	TGGCCA	1 cut(s)	1515
MseI	TTAA	5 cut(s)	111, 128, 770, 801, 824
MslI	CAYNNNNRTG	2 cut(s)	902, 1440
Msp20I	TGGCCA	1 cut(s)	1515
MspA1I	CMGCKG	2 cut(s)	419, 1013
MspI	CCGG	5 cut(s)	270, 890, 1107, 1162, 1664
Mva1269I	GAATGC	2 cut(s)	1206, 1385
MvaI	CCWGG	7 cut(s)	284, 335, 620, 1069, 1354, 1596, 1829
MwoI	GCNNNNNNNGC	6 cut(s)	791, 974, 1061, 1157, 1674, 1871
NciI	CCSGG	4 cut(s)	1107, 1162, 1163, 1665
NcoI	CCATGG	1 cut(s)	903
NdeI	CATATG	2 cut(s)	1326, 1788
NdeII	GATC	5 cut(s)	118, 775, 1229, 1270, 1349
NlaIV	GGNNCC	5 cut(s)	617, 834, 1008, 1333, 1351
NmuCI	GTSAC	6 cut(s)	16, 52, 100, 515, 872, 1016
NspI	RCATGY	5 cut(s)	880, 968, 1641, 1806, 1948
PaeI	GCATGC	2 cut(s)	968, 1948
PagI	TCATGA	1 cut(s)	787
PceI	AGGCCT	1 cut(s)	1623
PciI	ACATGT	1 cut(s)	876
PctI	GAATGC	2 cut(s)	1206, 1385
PdmI	GAANNNNTTC	2 cut(s)	992, 1603
PfeI	GAWTC	7 cut(s)	464, 532, 1045, 1113, 1285, 1450, 1817
PflMI	CCANNNNNTGG	3 cut(s)	401, 1184, 1522
PfoI	TCCNGGA	2 cut(s)	1105, 1352
PkrI	GCNGC	9 cut(s)	653, 1066, 1150, 1539, 1633, 1636, 1801, 1867, 1891
PleI	GAGTC	1 cut(s)	415
PpsI	GAGTC	1 cut(s)	415
PscI	ACATGT	1 cut(s)	876
PshAI	GACNNNNGTC	1 cut(s)	686
PsiI	TTATAA	1 cut(s)	1059
Psp6I	CCWGG	7 cut(s)	282, 333, 618, 1067, 1352, 1594, 1827
PspEI	GGTNACC	1 cut(s)	1016
PspFI	CCCAGC	1 cut(s)	591
PspGI	CCWGG	7 cut(s)	282, 333, 618, 1067, 1352, 1594, 1827
PspN4I	GGNNCC	5 cut(s)	617, 834, 1008, 1333, 1351
PspPI	GGNCC	3 cut(s)	208, 413, 1697
PsuI	RGATCY	1 cut(s)	1349
PvuII	CAGCTG	2 cut(s)	419, 1013
RsaI	GTAC	2 cut(s)	8, 503
RsaNI	GTAC	2 cut(s)	7, 502
RseI	CAYNNNNRTG	2 cut(s)	902, 1440
SaqAI	TTAA	5 cut(s)	111, 128, 770, 801, 824
SatI	GCNGC	9 cut(s)	652, 1065, 1149, 1538, 1632, 1635, 1800, 1866, 1890
Sau3AI	GATC	5 cut(s)	118, 775, 1229, 1270, 1349
Sau96I	GGNCC	3 cut(s)	208, 413, 1697
SchI	GAGTC	1 cut(s)	416
SduI	GDGCHC	1 cut(s)	1670
SfaNI	GCATC	6 cut(s)	127, 346, 922, 1042, 1240, 1642
SfcI	CTRYAG	2 cut(s)	450, 1374
SinI	GGWCC	3 cut(s)	208, 413, 1697
SmaI	CCCGGG	1 cut(s)	1163
SmiMI	CAYNNNNRTG	2 cut(s)	902, 1440
SphI	GCATGC	2 cut(s)	968, 1948
Sse9I	AATT	8 cut(s)	437, 494, 839, 867, 1140, 1173, 1265, 1580
SseBI	AGGCCT	1 cut(s)	1623
SspI	AATATT	1 cut(s)	262
SspMI	CTAG	6 cut(s)	60, 233, 320, 665, 858, 1196
StuI	AGGCCT	1 cut(s)	1623
StyI	CCWWGG	4 cut(s)	211, 903, 1183, 1345
TaaI	ACNGT	4 cut(s)	331, 506, 599, 1922
TaiI	ACGT	2 cut(s)	12, 678
TaqI	TCGA	2 cut(s)	1419, 1432
TasI	AATT	8 cut(s)	437, 494, 839, 867, 1140, 1173, 1265, 1580
TfiI	GAWTC	7 cut(s)	464, 532, 1045, 1113, 1285, 1450, 1817
Tru1I	TTAA	5 cut(s)	111, 128, 770, 801, 824
Tru9I	TTAA	5 cut(s)	111, 128, 770, 801, 824
TscAI	CASTG	5 cut(s)	139, 402, 604, 1501, 1927
TseFI	GTSAC	6 cut(s)	16, 52, 100, 515, 872, 1016
TseI	GCWGC	9 cut(s)	651, 1064, 1148, 1537, 1631, 1634, 1799, 1865, 1889
Tsp45I	GTSAC	6 cut(s)	16, 52, 100, 515, 872, 1016
TspDTI	ATGAA	7 cut(s)	17, 524, 804, 1405, 1521, 1546, 1606
TspGWI	ACGGA	1 cut(s)	1749
TspMI	CCCGGG	1 cut(s)	1161
TspRI	CASTG	5 cut(s)	139, 402, 604, 1501, 1927
Van91I	CCANNNNNTGG	3 cut(s)	401, 1184, 1522
VpaK11BI	GGWCC	3 cut(s)	208, 413, 1697
XapI	RAATTY	5 cut(s)	867, 1140, 1173, 1265, 1580
XbaI	TCTAGA	1 cut(s)	232
XceI	RCATGY	5 cut(s)	880, 968, 1641, 1806, 1948
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1802
XmaI	CCCGGG	1 cut(s)	1161
XmiI	GTMKAC	2 cut(s)	917, 1373
XmnI	GAANNNNTTC	2 cut(s)	992, 1603
XspI	CTAG	6 cut(s)	60, 233, 320, 665, 858, 1196

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.