Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0003725

Physical Location & Seq

Genomic Coordinates Forward (+)

17087553 .. 17093764

Gene Structure 6212 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1085100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

ATGAAGTATGTTTTGGTGACAGGGGGAGTAGTAAGTGGACTTGGGAAAGGAGTGACTGCTAGCAGTGTTGGCCTTCTTCTCAAAGCTTGTGGACTTCGAGTCACTTCCATTAAAATTGATCCTTACCTAAACACCGATGCCGGAACTATGTCCCCAATTGAGCATGGTGAAGTGTTTGTGTTGGATGATGGTGGTGAGGTGGACTTGGACCTTGGAAACTATGAAAGATTTCTAGATATCAAGCTGACTCGTGATAATAATATTACTACTGGAAAGATTTACCAGGAGGTTATTGACAGAGAGAGAAAGGGAGATTATCTGGGAAAAACTGTCCAGGTTGTTCCTCACATCACAGATGCAATCCAAGAGTGGATCGAGCGTGTAGCCAAAATTCCAGTCGATGGAGAGTCAGGTGCAGCAGATGTTTGTGTCATAGAATTGGGTGGAACTATAGGTGATATTGAATCCATGCCTTTCATTGAGGCATTAGGACAGTTCTCATATCGCGTCGGTAGTAACAACTTTTGCTTGATTCATGTGAGCCTTGTGCCTGTTTTGCGTGTTGTTGGTGAGCAGAAAACAAAACCAACGCAGCACAGCGTTCGTGGACTGAGATGTATGGGTTTGACACCGCATATCATTGCTTGTCGCAGCACAATGGCACTAGAAGAGAACGTGAAGACTAAAGTCAGTCAATTCTGCCATGTACAGAAAGAGAACATCATCACTCTCTACGACGTTCCCAACATCTGGCACATTCCATTACTTTTAAGAGATCAGAAAGCTCATGAAGCAATCTTCAAAGTGCTCAACCTTCAAGGATTAACAAAGGACCCTGAATTGGAAGAGTGGACTTCTAGGGCTGAAATTTGTGACAAGTTGCATGAGCCGGTTCGCATTTCCATGGTCGGAAAGTATACAAGCCTTGCAGATGCCTACCTCTCTGTACAAAAGGCTCTTGTGCACGCTTCTGTTGCTTGCGGCAAGAAACTTTTCGTGGATTGGGTTTCGGCTGAAGACCTTGAAGAAGCAACTGAAAAAGAGAATCCTGATGCCTACAAAGCTGCATGGAAGTTATTGAAGGGTGCAGATGGTATTCTTGTTCCCGGAGGGTTCGGTGACAGAGGAGTGCAAGGGAAAATTCTTGCTGCAAAATACGCCCGGGAAAAGAGAATTCCTTTCCTTGGCATTTGTCTAGGAATGCAGGTTGCTGTGATTGAGGTTGCACGGTCTGTTCTAGGTCTGAAAGATGCTCATAGTGCAGAATTTGATCCTGACACTAAAAATCCCTGTGTTATTTTCATGCCTGAGGGCTCGAAAACACATATGGGAGGCACGATGCGTGTTGGATCCAGGAGAACATATTTTCAGTCTACAGACTGCAAATCAGCTAAACTATATGGAAACAAACGCTTCATTGATGAGAGACATCGGCACAGATATGAGGTTAATCCTGAAATGGTAGCACGCCTTGAAAATTCCGGCCTCTCTTTTACGGGCAAGGATGAAACTGGCCAACGCATGGAGATTGTTGAGCTGCGTAATCATCCATATTTCATCGGTGTCCAGTTCCATCCTGAATTTAAATCAAGACCAGGAAAACCTTCTGCTTTATTCTTAGGGCTTATAGCAGCAGCATGTGGGCAGTTGGACAATCTCTTGCAGGGCTCTGAGAGCAAAAGAAACGTCCCAAATCTAGCTGCCAATGACATGCTGTCCCAAAGGAATATTGTCCCAAATGGAGCAAGCAAGGACATGTCCCAAAGGACTAGTGTTCCAAATGGAGCAAGCAATCATATGTTCAAAGCAGCATGTGGGAGGAATGTCCCAAATGGAGCAGCAAAAGCATACCATAACGGAGCTGTAACAAAGTTTGCCAATCGAGCACAAGACGGTGCATACAGCATTTTCAATGGGATGCACTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003883 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006241 GO:0006629 GO:0006644 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009141 GO:0009142 GO:0009147 GO:0009148 GO:0009163 GO:0009165 GO:0009199 GO:0009201 GO:0009208 GO:0009209 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016874 GO:0016879 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019856 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044271 GO:0044281 GO:0044283 GO:0046036 GO:0046112 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00240 ko01100 map00240 map01100

Pfam Domains

Protein Families

CTP_synth_N GATase

Protein Analysis

643

Amino Acids

70.52

Weight (kDa)

8.1

Isoelectric Point (pI)

37.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CTP_synth_N	PF06418	2 - 272	4e-124	CTP synthase N-terminus
GATase	PF00117	309 - 543	4e-45	Glutamine amidotransferase class-I

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003725)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30820 AT2G34890 AT4G20320 AT4G20320 AT4G20320 AT4G20320 AT4G20320 AT4G20320
fragaria_vesca	FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530
malus_domestica	MD00G1085100.v1.1 MD10G1221000.v1.1
prunus_persica	Prupe.4G123500_v2.0.a1 Prupe.4G123500_v2.0.a1 Prupe.4G123500_v2.0.a1 Prupe.4G123500_v2.0.a1
pyrus_communis	pycom05g21790 pycom10g18670
rosa_chinensis	RchiOBHm_Chr5g0022491
rosa_laevigata	RLG00000032665
rosa_multiflora	Rmu_sc0001514.1_g000012
rosa_roxburghii	Rroxscaffold_1G00056550
rosa_rugosa	Rorug05G0074200
rosa_samantha	Rh5AG161000 Rh5CG174300 Rh5DG160600
rosa_wichuraiana	Rw5G014350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1195
AccB7I	CCANNNNNTGG	3 cut(s)	401, 750, 1522
AccI	GTMKAC	2 cut(s)	917, 1373
AccII	CGCG	1 cut(s)	507
AciI	CCGC	2 cut(s)	632, 981
AclWI	GGATC	5 cut(s)	113, 380, 1265, 1344, 1357
AcoI	YGGCCR	1 cut(s)	1513
AcsI	RAATTY	7 cut(s)	390, 867, 1140, 1173, 1265, 1477, 1580
AcuI	CTGAAG	1 cut(s)	1035
AfaI	GTAC	2 cut(s)	708, 948
AfiI	CCNNNNNNNGG	5 cut(s)	401, 750, 841, 1184, 1522
AflIII	ACRYGT	1 cut(s)	1755
AgsI	TTSAA	8 cut(s)	464, 802, 818, 1025, 1081, 1475, 1804, 1912
AhdI	GACNNNNNGTC	2 cut(s)	98, 1714
AhlI	ACTAGT	1 cut(s)	1769
AjnI	CCWGG	4 cut(s)	282, 333, 1352, 1594
AjuI	GAANNNNNNNTTGG	1 cut(s)	28
AluBI	AGCT	8 cut(s)	86, 244, 785, 1064, 1391, 1537, 1700, 1862
AluI	AGCT	8 cut(s)	86, 244, 785, 1064, 1391, 1537, 1700, 1862
Alw21I	GWGCWC	3 cut(s)	810, 966, 1888
Alw26I	GTCTC	1 cut(s)	1420
Alw44I	GTGCAC	1 cut(s)	962
AlwI	GGATC	5 cut(s)	113, 380, 1265, 1344, 1357
Ama87I	CYCGRG	1 cut(s)	1161
AoxI	GGCC	3 cut(s)	70, 1483, 1513
ApaLI	GTGCAC	1 cut(s)	962
ApoI	RAATTY	7 cut(s)	390, 867, 1140, 1173, 1265, 1477, 1580
ArsI	GACNNNNNNTTYG	4 cut(s)	381, 413, 1671, 1703
Asp700I	GAANNNNTTC	3 cut(s)	228, 992, 1603
AspS9I	GGNCC	2 cut(s)	208, 832
AsuC2I	CCSGG	3 cut(s)	1107, 1162, 1163
AsuHPI	GGTGA	6 cut(s)	28, 179, 206, 467, 581, 1130
AsuNHI	GCTAGC	1 cut(s)	59
AvaI	CYCGRG	1 cut(s)	1161
AvaII	GGWCC	2 cut(s)	208, 832
AxyI	CCTNAGG	1 cut(s)	1308
BaeGI	GKGCMC	1 cut(s)	966
BalI	TGGCCA	1 cut(s)	1515
BamHI	GGATCC	1 cut(s)	1349
BanII	GRGCYC	2 cut(s)	1316, 1670
BauI	CACGAG	1 cut(s)	249
BbsI	GAAGAC	2 cut(s)	686, 1023
Bbv12I	GWGCWC	3 cut(s)	810, 966, 1888
BccI	CCATC	4 cut(s)	182, 395, 1085, 1581
BcgI	CGANNNNNNTGC	2 cut(s)	584, 618
BciT130I	CCWGG	4 cut(s)	284, 335, 1354, 1596
BcnI	CCSGG	3 cut(s)	1107, 1162, 1163
BcoDI	GTCTC	1 cut(s)	1420
BcuI	ACTAGT	1 cut(s)	1769
BfaI	CTAG	8 cut(s)	60, 233, 665, 858, 1196, 1238, 1697, 1770
BfmI	CTRYAG	2 cut(s)	450, 1374
BfuAI	ACCTGC	1 cut(s)	1195
Bme1390I	CCNGG	7 cut(s)	284, 335, 1107, 1162, 1163, 1354, 1596
Bme18I	GGWCC	2 cut(s)	208, 832
BmeRI	GACNNNNNGTC	2 cut(s)	98, 1714
BmeT110I	CYCGRG	1 cut(s)	1161
BmgT120I	GGNCC	2 cut(s)	208, 832
BmiI	GGNNCC	2 cut(s)	834, 1351
BmrFI	CCNGG	7 cut(s)	284, 335, 1107, 1162, 1163, 1354, 1596
BmsI	GCATC	7 cut(s)	127, 346, 922, 1042, 1240, 1329, 1908
BmtI	GCTAGC	1 cut(s)	63
BoxI	GACNNNNGTC	1 cut(s)	686
BpiI	GAAGAC	2 cut(s)	686, 1023
BpuMI	CCSGG	3 cut(s)	1107, 1162, 1163
BsaJI	CCNNGG	4 cut(s)	211, 903, 1161, 1183
Bsc4I	CCNNNNNNNGG	5 cut(s)	401, 750, 841, 1184, 1522
Bse118I	RCCGGY	1 cut(s)	889
Bse1I	ACTGG	4 cut(s)	274, 395, 1516, 1567
Bse21I	CCTNAGG	1 cut(s)	1308
Bse3DI	GCAATG	1 cut(s)	639
BseBI	CCWGG	4 cut(s)	284, 335, 1354, 1596
BseDI	CCNNGG	4 cut(s)	211, 903, 1161, 1183
BseGI	GGATG	5 cut(s)	190, 1510, 1546, 1573, 1923
BseLI	CCNNNNNNNGG	5 cut(s)	401, 750, 841, 1184, 1522
BseMI	GCAATG	1 cut(s)	639
BseMII	CTCAG	3 cut(s)	602, 1299, 1662
BseNI	ACTGG	4 cut(s)	274, 395, 1516, 1567
BseRI	GAGGAG	1 cut(s)	1140
BseSI	GKGCMC	1 cut(s)	966
BsgI	GTGCAG	3 cut(s)	435, 1107, 1281
Bsh1236I	CGCG	1 cut(s)	507
BshFI	GGCC	3 cut(s)	72, 1485, 1515
BsiHKAI	GWGCWC	3 cut(s)	810, 966, 1888
BsiHKCI	CYCGRG	1 cut(s)	1161
BsiSI	CCGG	5 cut(s)	141, 890, 1107, 1162, 1482
BslFI	GGGAC	6 cut(s)	136, 1673, 1702, 1718, 1744, 1811
BslI	CCNNNNNNNGG	5 cut(s)	401, 750, 841, 1184, 1522
BsmAI	GTCTC	1 cut(s)	1420
BsmFI	GGGAC	6 cut(s)	136, 1673, 1702, 1718, 1744, 1811
BsmI	GAATGC	1 cut(s)	1206
BsnI	GGCC	3 cut(s)	72, 1485, 1515
BsoBI	CYCGRG	1 cut(s)	1161
Bsp1286I	GDGCHC	5 cut(s)	810, 966, 1316, 1670, 1888
Bsp1407I	TGTACA	2 cut(s)	706, 946
Bsp143I	GATC	5 cut(s)	118, 372, 775, 1270, 1349
Bsp19I	CCATGG	1 cut(s)	903
BspACI	CCGC	2 cut(s)	632, 981
BspANI	GGCC	3 cut(s)	72, 1485, 1515
BspCNI	CTCAG	3 cut(s)	603, 1300, 1663
BspFNI	CGCG	1 cut(s)	507
BspHI	TCATGA	1 cut(s)	787
BspLI	GGNNCC	2 cut(s)	834, 1351
BspMI	ACCTGC	1 cut(s)	1195
BspOI	GCTAGC	1 cut(s)	63
BspPI	GGATC	5 cut(s)	113, 380, 1265, 1344, 1357
BsrDI	GCAATG	1 cut(s)	639
BsrFI	RCCGGY	1 cut(s)	889
BsrGI	TGTACA	2 cut(s)	706, 946
BsrI	ACTGG	4 cut(s)	274, 395, 1516, 1567
BssAI	RCCGGY	1 cut(s)	889
BssECI	CCNNGG	4 cut(s)	211, 903, 1161, 1183
BssMI	GATC	5 cut(s)	118, 372, 775, 1270, 1349
BssNAI	GTATAC	1 cut(s)	918
BssSI	CACGAG	1 cut(s)	249
BssT1I	CCWWGG	3 cut(s)	211, 903, 1183
Bst1107I	GTATAC	1 cut(s)	918
Bst2BI	CACGAG	1 cut(s)	249
Bst2UI	CCWGG	4 cut(s)	284, 335, 1354, 1596
Bst4CI	ACNGT	4 cut(s)	331, 495, 1230, 1895
Bst6I	CTCTTC	2 cut(s)	663, 840
BstAUI	TGTACA	2 cut(s)	706, 946
BstC8I	GCNNGC	6 cut(s)	61, 966, 979, 1468, 1747, 1789
BstDEI	CTNAG	4 cut(s)	611, 1308, 1618, 1671
BstDSI	CCRYGG	1 cut(s)	903
BstF5I	GGATG	5 cut(s)	190, 1510, 1546, 1573, 1923
BstFNI	CGCG	1 cut(s)	507
BstKTI	GATC	5 cut(s)	121, 375, 778, 1273, 1352
BstMAI	GTCTC	1 cut(s)	1420
BstMBI	GATC	5 cut(s)	118, 372, 775, 1270, 1349
BstNI	CCWGG	4 cut(s)	284, 335, 1354, 1596
BstNSI	RCATGY	4 cut(s)	1641, 1714, 1759, 1815
BstPAI	GACNNNNGTC	1 cut(s)	686
BstSCI	CCNGG	7 cut(s)	282, 333, 1105, 1160, 1161, 1352, 1594
BstSFI	CTRYAG	2 cut(s)	450, 1374
BstSLI	GKGCMC	1 cut(s)	966
BstUI	CGCG	1 cut(s)	507
BstV2I	GAAGAC	2 cut(s)	686, 1023
BstX2I	RGATCY	1 cut(s)	1349
BstYI	RGATCY	1 cut(s)	1349
BstZ17I	GTATAC	1 cut(s)	918
Bsu36I	CCTNAGG	1 cut(s)	1308
BsuRI	GGCC	3 cut(s)	72, 1485, 1515
BtgI	CCRYGG	1 cut(s)	903
BtsCI	GGATG	5 cut(s)	190, 1510, 1546, 1573, 1923
BtsI	GCAGTG	1 cut(s)	70
BtsIMutI	CAGTG	1 cut(s)	70
BveI	ACCTGC	1 cut(s)	1195
Cac8I	GCNNGC	6 cut(s)	61, 966, 979, 1468, 1747, 1789
CciI	TCATGA	1 cut(s)	787
Cfr10I	RCCGGY	1 cut(s)	889
Cfr13I	GGNCC	2 cut(s)	208, 832
Cfr9I	CCCGGG	1 cut(s)	1161
CseI	GACGC	1 cut(s)	496
Csp6I	GTAC	2 cut(s)	707, 947
CspCI	CAANNNNNGTGG	2 cut(s)	70, 105
CviQI	GTAC	2 cut(s)	707, 947
DdeI	CTNAG	4 cut(s)	611, 1308, 1618, 1671
DpnI	GATC	5 cut(s)	120, 374, 777, 1272, 1351
DpnII	GATC	5 cut(s)	118, 372, 775, 1270, 1349
DraI	TTTAAA	1 cut(s)	1585
DriI	GACNNNNNGTC	2 cut(s)	98, 1714
EaeI	YGGCCR	1 cut(s)	1513
Eam1104I	CTCTTC	2 cut(s)	663, 840
Eam1105I	GACNNNNNGTC	2 cut(s)	98, 1714
EarI	CTCTTC	2 cut(s)	663, 840
Eco130I	CCWWGG	3 cut(s)	211, 903, 1183
Eco24I	GRGCYC	2 cut(s)	1316, 1670
Eco32I	GATATC	1 cut(s)	238
Eco47I	GGWCC	2 cut(s)	208, 832
Eco57I	CTGAAG	1 cut(s)	1035
Eco81I	CCTNAGG	1 cut(s)	1308
Eco88I	CYCGRG	1 cut(s)	1161
EcoO109I	RGGNCCY	1 cut(s)	832
EcoRI	GAATTC	1 cut(s)	1173
EcoRII	CCWGG	4 cut(s)	282, 333, 1352, 1594
EcoRV	GATATC	1 cut(s)	238
EcoT14I	CCWWGG	3 cut(s)	211, 903, 1183
EcoT38I	GRGCYC	2 cut(s)	1316, 1670
ErhI	CCWWGG	3 cut(s)	211, 903, 1183
FaqI	GGGAC	6 cut(s)	136, 1673, 1702, 1718, 1744, 1811
FauNDI	CATATG	2 cut(s)	1326, 1797
FblI	GTMKAC	2 cut(s)	917, 1373
FokI	GGATG	4 cut(s)	197, 1517, 1533, 1560
FriOI	GRGCYC	2 cut(s)	1316, 1670
FspBI	CTAG	8 cut(s)	60, 233, 665, 858, 1196, 1238, 1697, 1770
HaeIII	GGCC	3 cut(s)	72, 1485, 1515
HapII	CCGG	5 cut(s)	141, 890, 1107, 1162, 1482
HgaI	GACGC	1 cut(s)	496
HindIII	AAGCTT	1 cut(s)	84
HinfI	GANTC	6 cut(s)	99, 247, 407, 464, 532, 1045
HpaII	CCGG	5 cut(s)	141, 890, 1107, 1162, 1482
HphI	GGTGA	6 cut(s)	28, 179, 206, 467, 581, 1130
Hpy166II	GTNNAC	8 cut(s)	38, 92, 202, 608, 852, 918, 964, 1374
Hpy188I	TCNGA	4 cut(s)	780, 911, 1245, 1672
Hpy188III	TCNNGA	8 cut(s)	233, 251, 788, 1049, 1274, 1454, 1577, 1590
Hpy8I	GTNNAC	8 cut(s)	38, 92, 202, 608, 852, 918, 964, 1374
Hpy99I	CGWCG	2 cut(s)	512, 740
HpyAV	CCTTC	4 cut(s)	83, 824, 1075, 1614
HpyCH4III	ACNGT	4 cut(s)	331, 495, 1230, 1895
HpyCH4IV	ACGT	3 cut(s)	675, 738, 1686
HpyF3I	CTNAG	4 cut(s)	611, 1308, 1618, 1671
HpySE526I	ACGT	3 cut(s)	675, 738, 1686
Kzo9I	GATC	5 cut(s)	118, 372, 775, 1270, 1349
LmnI	GCTCC	4 cut(s)	1742, 1784, 1835, 1859
LweI	GCATC	7 cut(s)	127, 346, 922, 1042, 1240, 1329, 1908
MaeI	CTAG	8 cut(s)	60, 233, 665, 858, 1196, 1238, 1697, 1770
MaeII	ACGT	3 cut(s)	675, 738, 1686
MaeIII	GTNAC	7 cut(s)	16, 52, 100, 515, 872, 1118, 1864
MalI	GATC	5 cut(s)	120, 374, 777, 1272, 1351
MboI	GATC	5 cut(s)	118, 372, 775, 1270, 1349
MboII	GAAGA	7 cut(s)	68, 680, 691, 790, 857, 1028, 1037
MfeI	CAATTG	1 cut(s)	156
MflI	RGATCY	1 cut(s)	1349
MhlI	GDGCHC	5 cut(s)	810, 966, 1316, 1670, 1888
MlsI	TGGCCA	1 cut(s)	1515
MluNI	TGGCCA	1 cut(s)	1515
MlyI	GAGTC	3 cut(s)	108, 241, 416
MmeI	TCCRAC	4 cut(s)	162, 889, 1327, 1629
Mox20I	TGGCCA	1 cut(s)	1515
MroXI	GAANNNNTTC	3 cut(s)	228, 992, 1603
MscI	TGGCCA	1 cut(s)	1515
MseI	TTAA	5 cut(s)	111, 770, 824, 1449, 1584
MslI	CAYNNNNRTG	2 cut(s)	902, 1440
Msp20I	TGGCCA	1 cut(s)	1515
MspI	CCGG	5 cut(s)	141, 890, 1107, 1162, 1482
MspR9I	CCNGG	7 cut(s)	284, 335, 1107, 1162, 1163, 1354, 1596
MunI	CAATTG	1 cut(s)	156
Mva1269I	GAATGC	1 cut(s)	1206
MvaI	CCWGG	4 cut(s)	284, 335, 1354, 1596
MvnI	CGCG	1 cut(s)	507
NciI	CCSGG	3 cut(s)	1107, 1162, 1163
NcoI	CCATGG	1 cut(s)	903
NdeI	CATATG	2 cut(s)	1326, 1797
NdeII	GATC	5 cut(s)	118, 372, 775, 1270, 1349
NheI	GCTAGC	1 cut(s)	59
NlaIV	GGNNCC	2 cut(s)	834, 1351
NmuCI	GTSAC	5 cut(s)	16, 52, 100, 872, 1118
NspI	RCATGY	4 cut(s)	1641, 1714, 1759, 1815
PagI	TCATGA	1 cut(s)	787
PciI	ACATGT	1 cut(s)	1755
PctI	GAATGC	1 cut(s)	1206
PdmI	GAANNNNTTC	3 cut(s)	228, 992, 1603
PfeI	GAWTC	3 cut(s)	464, 532, 1045
PflMI	CCANNNNNTGG	3 cut(s)	401, 750, 1522
PfoI	TCCNGGA	2 cut(s)	1105, 1352
PleI	GAGTC	3 cut(s)	107, 241, 415
PpsI	GAGTC	3 cut(s)	107, 241, 415
PpuMI	RGGWCCY	1 cut(s)	832
PscI	ACATGT	1 cut(s)	1755
PshAI	GACNNNNGTC	1 cut(s)	686
Psp5II	RGGWCCY	1 cut(s)	832
Psp6I	CCWGG	4 cut(s)	282, 333, 1352, 1594
PspGI	CCWGG	4 cut(s)	282, 333, 1352, 1594
PspN4I	GGNNCC	2 cut(s)	834, 1351
PspPI	GGNCC	2 cut(s)	208, 832
PspPPI	RGGWCCY	1 cut(s)	832
PsuI	RGATCY	1 cut(s)	1349
RsaI	GTAC	2 cut(s)	708, 948
RsaNI	GTAC	2 cut(s)	707, 947
RseI	CAYNNNNRTG	2 cut(s)	902, 1440
SaqAI	TTAA	5 cut(s)	111, 770, 824, 1449, 1584
Sau3AI	GATC	5 cut(s)	118, 372, 775, 1270, 1349
Sau96I	GGNCC	2 cut(s)	208, 832
SchI	GAGTC	3 cut(s)	108, 241, 416
ScrFI	CCNGG	7 cut(s)	284, 335, 1107, 1162, 1163, 1354, 1596
SduI	GDGCHC	5 cut(s)	810, 966, 1316, 1670, 1888
SfaNI	GCATC	7 cut(s)	127, 346, 922, 1042, 1240, 1329, 1908
SfcI	CTRYAG	2 cut(s)	450, 1374
SinI	GGWCC	2 cut(s)	208, 832
SmaI	CCCGGG	1 cut(s)	1163
SmiI	ATTTAAAT	1 cut(s)	1585
SmiMI	CAYNNNNRTG	2 cut(s)	902, 1440
SpeI	ACTAGT	1 cut(s)	1769
SsiI	CCGC	2 cut(s)	632, 981
SspI	AATATT	2 cut(s)	262, 1729
SspMI	CTAG	8 cut(s)	60, 233, 665, 858, 1196, 1238, 1697, 1770
StyD4I	CCNGG	7 cut(s)	282, 333, 1105, 1160, 1161, 1352, 1594
StyI	CCWWGG	3 cut(s)	211, 903, 1183
SwaI	ATTTAAAT	1 cut(s)	1585
TaaI	ACNGT	4 cut(s)	331, 495, 1230, 1895
TaiI	ACGT	3 cut(s)	678, 741, 1689
TaqI	TCGA	5 cut(s)	97, 375, 399, 1316, 1882
TatI	WGTACW	2 cut(s)	706, 946
TauI	GCSGC	1 cut(s)	984
TfiI	GAWTC	3 cut(s)	464, 532, 1045
Tru1I	TTAA	5 cut(s)	111, 770, 824, 1449, 1584
Tru9I	TTAA	5 cut(s)	111, 770, 824, 1449, 1584
TscAI	CASTG	1 cut(s)	70
TseFI	GTSAC	5 cut(s)	16, 52, 100, 872, 1118
Tsp45I	GTSAC	5 cut(s)	16, 52, 100, 872, 1118
TspDTI	ATGAA	9 cut(s)	17, 237, 466, 524, 804, 1291, 1405, 1521, 1546
TspGWI	ACGGA	1 cut(s)	1872
TspMI	CCCGGG	1 cut(s)	1161
TspRI	CASTG	1 cut(s)	70
Van91I	CCANNNNNTGG	3 cut(s)	401, 750, 1522
VneI	GTGCAC	1 cut(s)	962
VpaK11BI	GGWCC	2 cut(s)	208, 832
XapI	RAATTY	7 cut(s)	390, 867, 1140, 1173, 1265, 1477, 1580
XbaI	TCTAGA	1 cut(s)	232
XceI	RCATGY	4 cut(s)	1641, 1714, 1759, 1815
XmaI	CCCGGG	1 cut(s)	1161
XmiI	GTMKAC	2 cut(s)	917, 1373
XmnI	GAANNNNTTC	3 cut(s)	228, 992, 1603
XspI	CTAG	8 cut(s)	60, 233, 665, 858, 1196, 1238, 1697, 1770

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.