Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0003725

Physical Location & Seq

Genomic Coordinates Forward (+)

17278565 .. 17284371

Gene Structure 5807 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG161000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1746 bp

ATGTCACCTGTGGAGCATGGTGAAGTCTTTGTTCTAGATGATGGTGGTGAGGTGGACCTGGACCTTGGAAACTATGAGCGATTCCTAGAAATCAAGCTGACCCGTGATAATAATATTACTACCGGAAAGATTTACCAGGATGTTATAAACAAAGAGAGAAAGGGAGATTATCTGGGAAAAACTGTCCAGGTTGTCCCTCACATCACAGATGCTATCCAAGACTGGATTGAGCGTGTAGCCCATATACCAGTTGATGGAAAGTCAGGCCCTGCTGATGTTTGTGTCATAGAGTTGGGTGGAACTATAGGTGATATTGAATCCATGCCATTTATTGAGGCATTAGGACAATTCTCGTACCGTGTAGGAGCTGATAATTTTTGCTTAGTTCATGTCAGCCTTGTACCTGTTTTGAATGTTGTTGGTGAACAGAAAACAAAACCAACCCAGCATAGTGTTCGTGGACTGAGATGTCTGGGTTTGACACCACATGTGATAGCTTGTCGCAGCACAACGCCACTAGAAGAAAATGTAAAGACCAAACTCAGTCAATTTTGCCATGTCCAGAAAGATAACATCATCACGCTCTATGATGTTCCCAACATTTGGCACATTCCATTACTCTTAAGAGACCAGAAGGCTCATGAAGCAATCTTTAAAGTGTTTAACCTTCAAGGATTAACAAGGGAACCTGAATTAGAACAGTGGACTACTATGGCTGAAGTTTGTGATATGTTGCATGAGCCGGTGCGCATTGCCATAGTGGGGAAGTATACAAGCCTTCCTGATGCATACCTCTCCATACAAAAGGCTCTTGTTCATGCTTCTGTTTCTCGCGGCAAGAAACTTTTTGTGGATTGGGTTCCATCTGGTGACCTTGAGCACACAACTGAGAGAGAGAATCCTGATGCTTATAAAGCTGCATGGAAGTTGTTGAAGGGCGCAGATGGTATTCTTATTCCAGGAGGATTTGGTGATAGAGGAGTGCAAGGGAAAATTCTTGCAGTAAAGTATGCCCGGCAAAAGAGAATTCCATTCCTTGGTATTTGTCTAGGAATGCAGGTCGCCGTGATTGAGTTTGCAAGATCTGTTCTTGGTCTGCAGGATGCCAACAGCACAGAGTTTGATCCTGACACTAAGAATCCCTGTGTTATATTTATGCCTGAGGGCTCAAAAACGCATATGGGAGGCACCATGCGCCTTGGATCCAGGAGAACATATTTCCAGTCTACAGACTGTAAATCAGCTAAACTATATGGAAACAAACGCTTTGTTGATGAGAGACATCGGCACAGATATGAGGTGAACCCTGACATGGTAGCACGCCTTGAAAATTCCGGCCTCTCTTTCACTGGCAAGGATGAAACTGGCCAGCGCATGGAGATTGTTGAGCTACGTAATCATCCCTATTTCATCGGTGTCCAGTTCCATCCTGAATATAAATCAAGACCAGCAAAACCTTCTGCTTTATTCCTAGGGCTTATAGCAGCAGCATGTGGACAGTTGGATGCTCTCTTACCAAGCTCTGAGAGGAAAAGGAGTGCTTCATACGGAGCAGGCAACGAAATGTTTGGAGCAGCATGTGGGCAGTTGGATGCTTTCCTCCAGGGCTCTCCAGAGGCGAAAAGGAATGTCTCGAATGGAGCAGGCCACGATGTATATAATGCCAAAACATGCCACAATGGAGGTGTAATTACTAATAGGCCTCAAGACGGTGTATATAGCATTTTCAATGGGATGCACTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003883 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006241 GO:0006629 GO:0006644 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009141 GO:0009142 GO:0009147 GO:0009148 GO:0009163 GO:0009165 GO:0009199 GO:0009201 GO:0009208 GO:0009209 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016874 GO:0016879 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019856 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044271 GO:0044281 GO:0044283 GO:0046036 GO:0046112 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00240 ko01100 map00240 map01100

Pfam Domains

Protein Families

CTP_synth_N GATase

Protein Analysis

581

Amino Acids

64.39

Weight (kDa)

6.71

Isoelectric Point (pI)

42.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CTP_synth_N	PF06418	1 - 223	8.9e-94	CTP synthase N-terminus
GATase	PF00117	260 - 494	5.7e-45	Glutamine amidotransferase class-I

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003725)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30820 AT2G34890 AT4G20320 AT4G20320 AT4G20320 AT4G20320 AT4G20320 AT4G20320
fragaria_vesca	FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530
malus_domestica	MD00G1085100.v1.1 MD10G1221000.v1.1
prunus_persica	Prupe.4G123500_v2.0.a1 Prupe.4G123500_v2.0.a1 Prupe.4G123500_v2.0.a1 Prupe.4G123500_v2.0.a1
pyrus_communis	pycom05g21790 pycom10g18670
rosa_chinensis	RchiOBHm_Chr5g0022491
rosa_laevigata	RLG00000032665
rosa_multiflora	Rmu_sc0001514.1_g000012
rosa_roxburghii	Rroxscaffold_1G00056550
rosa_rugosa	Rorug05G0074200
rosa_samantha	Rh5AG161000 Rh5CG174300 Rh5DG160600
rosa_wichuraiana	Rw5G014350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	146, 912
AasI	GACNNNNNNGTC	1 cut(s)	468
Acc16I	TGCGCA	1 cut(s)	749
Acc36I	ACCTGC	1 cut(s)	1048
AccB1I	GGYRCC	1 cut(s)	1187
AccB7I	CCANNNNNTGG	4 cut(s)	254, 603, 1037, 1375
AccI	GTMKAC	2 cut(s)	770, 1226
AccII	CGCG	1 cut(s)	834
AciI	CCGC	1 cut(s)	834
AclWI	GGATC	3 cut(s)	1118, 1197, 1210
AcoI	YGGCCR	1 cut(s)	1366
AcsI	RAATTY	3 cut(s)	993, 1026, 1330
AcuI	CTGAAG	1 cut(s)	738
AfaI	GTAC	2 cut(s)	356, 402
AfiI	CCNNNNNNNGG	7 cut(s)	254, 603, 762, 1037, 1312, 1375, 1709
AflII	CTTAAG	1 cut(s)	622
AflIII	ACRYGT	1 cut(s)	487
AgsI	TTSAA	6 cut(s)	317, 412, 671, 934, 1328, 1729
AjnI	CCWGG	6 cut(s)	57, 135, 186, 958, 1205, 1602
AluBI	AGCT	7 cut(s)	97, 368, 497, 917, 1244, 1390, 1521
AluI	AGCT	7 cut(s)	97, 368, 497, 917, 1244, 1390, 1521
Alw21I	GWGCWC	1 cut(s)	882
Alw26I	GTCTC	3 cut(s)	621, 1273, 1636
AlwI	GGATC	3 cut(s)	1118, 1197, 1210
AlwNI	CAGNNNCTG	1 cut(s)	269
AoxI	GGCC	5 cut(s)	265, 1336, 1366, 1645, 1700
ApeKI	GCWGC	5 cut(s)	504, 917, 1484, 1487, 1574
ApoI	RAATTY	3 cut(s)	993, 1026, 1330
AspA2I	CCTAGG	1 cut(s)	1471
AspLEI	GCGC	4 cut(s)	750, 941, 1197, 1374
AspS9I	GGNCC	3 cut(s)	55, 61, 266
AsuC2I	CCSGG	1 cut(s)	1015
AsuHPI	GGTGA	7 cut(s)	32, 59, 320, 434, 881, 983, 1312
AvaII	GGWCC	2 cut(s)	55, 61
AvrII	CCTAGG	1 cut(s)	1471
AxyI	CCTNAGG	1 cut(s)	1161
BalI	TGGCCA	1 cut(s)	1368
BamHI	GGATCC	1 cut(s)	1202
BanI	GGYRCC	1 cut(s)	1187
BanII	GRGCYC	2 cut(s)	1169, 1610
Bbv12I	GWGCWC	1 cut(s)	882
BbvI	GCAGC	5 cut(s)	516, 904, 1496, 1499, 1586
BccI	CCATC	5 cut(s)	35, 248, 871, 938, 1434
BceAI	ACGGC	1 cut(s)	1049
BcgI	CGANNNNNNTGC	2 cut(s)	437, 471
BciT130I	CCWGG	6 cut(s)	59, 137, 188, 960, 1207, 1604
BcnI	CCSGG	1 cut(s)	1015
BcoDI	GTCTC	3 cut(s)	621, 1273, 1636
BfaI	CTAG	5 cut(s)	35, 86, 518, 1049, 1472
BfmI	CTRYAG	3 cut(s)	303, 1097, 1227
BfrI	CTTAAG	1 cut(s)	622
BfuAI	ACCTGC	1 cut(s)	1048
BglII	AGATCT	1 cut(s)	1082
BisI	GCNGC	6 cut(s)	505, 835, 918, 1485, 1488, 1575
BlnI	CCTAGG	1 cut(s)	1471
BlsI	GCNGC	6 cut(s)	506, 836, 919, 1486, 1489, 1576
Bme1390I	CCNGG	7 cut(s)	59, 137, 188, 960, 1015, 1207, 1604
Bme18I	GGWCC	2 cut(s)	55, 61
BmgT120I	GGNCC	3 cut(s)	55, 61, 266
BmiI	GGNNCC	4 cut(s)	687, 861, 1189, 1204
BmrFI	CCNGG	7 cut(s)	59, 137, 188, 960, 1015, 1207, 1604
BmsI	GCATC	7 cut(s)	199, 775, 895, 1093, 1495, 1582, 1725
BpmI	CTGGAG	2 cut(s)	1586, 1596
BpuEI	CTTGAG	2 cut(s)	896, 1689
BpuMI	CCSGG	1 cut(s)	1015
BsaAI	YACGTR	1 cut(s)	1394
BsaI	GGTCTC	1 cut(s)	621
BsaJI	CCNNGG	5 cut(s)	64, 1036, 1198, 1471, 1603
BsaWI	WCCGGW	1 cut(s)	122
Bsc4I	CCNNNNNNNGG	7 cut(s)	254, 603, 762, 1037, 1312, 1375, 1709
Bse118I	RCCGGY	1 cut(s)	742
Bse1I	ACTGG	6 cut(s)	227, 248, 1222, 1354, 1369, 1420
Bse21I	CCTNAGG	1 cut(s)	1161
Bse3DI	GCAATG	1 cut(s)	750
BseBI	CCWGG	6 cut(s)	59, 137, 188, 960, 1207, 1604
BseDI	CCNNGG	5 cut(s)	64, 1036, 1198, 1471, 1603
BseGI	GGATG	8 cut(s)	145, 1108, 1363, 1399, 1426, 1510, 1597, 1740
BseLI	CCNNNNNNNGG	7 cut(s)	254, 603, 762, 1037, 1312, 1375, 1709
BseMI	GCAATG	1 cut(s)	750
BseMII	CTCAG	5 cut(s)	455, 556, 879, 1152, 1515
BseNI	ACTGG	6 cut(s)	227, 248, 1222, 1354, 1369, 1420
BseRI	GAGGAG	1 cut(s)	993
BseXI	GCAGC	5 cut(s)	516, 904, 1496, 1499, 1586
BseYI	CCCAGC	1 cut(s)	444
Bsh1236I	CGCG	1 cut(s)	834
BshFI	GGCC	5 cut(s)	267, 1338, 1368, 1647, 1702
BshNI	GGYRCC	1 cut(s)	1187
BsiHKAI	GWGCWC	1 cut(s)	882
BsiSI	CCGG	4 cut(s)	123, 743, 1015, 1335
BslFI	GGGAC	1 cut(s)	179
BslI	CCNNNNNNNGG	7 cut(s)	254, 603, 762, 1037, 1312, 1375, 1709
BsmAI	GTCTC	3 cut(s)	621, 1273, 1636
BsmFI	GGGAC	1 cut(s)	179
BsmI	GAATGC	1 cut(s)	1059
BsnI	GGCC	5 cut(s)	267, 1338, 1368, 1647, 1702
Bso31I	GGTCTC	1 cut(s)	621
Bsp1286I	GDGCHC	3 cut(s)	882, 1169, 1610
Bsp143I	GATC	3 cut(s)	1082, 1123, 1202
BspACI	CCGC	1 cut(s)	834
BspANI	GGCC	5 cut(s)	267, 1338, 1368, 1647, 1702
BspCNI	CTCAG	5 cut(s)	456, 555, 880, 1153, 1516
BspFNI	CGCG	1 cut(s)	834
BspHI	TCATGA	1 cut(s)	640
BspLI	GGNNCC	4 cut(s)	687, 861, 1189, 1204
BspMAI	CTGCAG	1 cut(s)	1101
BspMI	ACCTGC	1 cut(s)	1048
BspPI	GGATC	3 cut(s)	1118, 1197, 1210
BspT107I	GGYRCC	1 cut(s)	1187
BspTI	CTTAAG	1 cut(s)	622
BspTNI	GGTCTC	1 cut(s)	621
BsrDI	GCAATG	1 cut(s)	750
BsrFI	RCCGGY	1 cut(s)	742
BsrI	ACTGG	6 cut(s)	227, 248, 1222, 1354, 1369, 1420
BssAI	RCCGGY	1 cut(s)	742
BssECI	CCNNGG	5 cut(s)	64, 1036, 1198, 1471, 1603
BssMI	GATC	3 cut(s)	1082, 1123, 1202
BssNAI	GTATAC	1 cut(s)	771
BssT1I	CCWWGG	4 cut(s)	64, 1036, 1198, 1471
Bst1107I	GTATAC	1 cut(s)	771
Bst2UI	CCWGG	6 cut(s)	59, 137, 188, 960, 1207, 1604
Bst4CI	ACNGT	6 cut(s)	184, 359, 702, 1235, 1500, 1712
BstAFI	CTTAAG	1 cut(s)	622
BstBAI	YACGTR	1 cut(s)	1394
BstC8I	GCNNGC	4 cut(s)	1321, 1370, 1555, 1645
BstDEI	CTNAG	7 cut(s)	382, 464, 542, 888, 1134, 1161, 1524
BstEII	GGTNACC	1 cut(s)	869
BstF5I	GGATG	8 cut(s)	145, 1108, 1363, 1399, 1426, 1510, 1597, 1740
BstFNI	CGCG	1 cut(s)	834
BstHHI	GCGC	4 cut(s)	750, 941, 1197, 1374
BstKTI	GATC	3 cut(s)	1085, 1126, 1205
BstMAI	GTCTC	3 cut(s)	621, 1273, 1636
BstMBI	GATC	3 cut(s)	1082, 1123, 1202
BstMWI	GCNNNNNNNGC	3 cut(s)	644, 914, 1194
BstNI	CCWGG	6 cut(s)	59, 137, 188, 960, 1207, 1604
BstNSI	RCATGY	4 cut(s)	491, 1494, 1581, 1674
BstPI	GGTNACC	1 cut(s)	869
BstSCI	CCNGG	7 cut(s)	57, 135, 186, 958, 1013, 1205, 1602
BstSFI	CTRYAG	3 cut(s)	303, 1097, 1227
BstSNI	TACGTA	1 cut(s)	1394
BstUI	CGCG	1 cut(s)	834
BstV1I	GCAGC	5 cut(s)	516, 904, 1496, 1499, 1586
BstX2I	RGATCY	2 cut(s)	1082, 1202
BstYI	RGATCY	2 cut(s)	1082, 1202
BstZ17I	GTATAC	1 cut(s)	771
Bsu36I	CCTNAGG	1 cut(s)	1161
BsuRI	GGCC	5 cut(s)	267, 1338, 1368, 1647, 1702
BtsCI	GGATG	8 cut(s)	145, 1108, 1363, 1399, 1426, 1510, 1597, 1740
BtsIMutI	CAGTG	2 cut(s)	707, 1347
BveI	ACCTGC	1 cut(s)	1048
Cac8I	GCNNGC	4 cut(s)	1321, 1370, 1555, 1645
CaiI	CAGNNNCTG	1 cut(s)	269
CciI	TCATGA	1 cut(s)	640
CfoI	GCGC	4 cut(s)	750, 941, 1197, 1374
Cfr10I	RCCGGY	1 cut(s)	742
Cfr13I	GGNCC	3 cut(s)	55, 61, 266
Csp6I	GTAC	2 cut(s)	355, 401
CviQI	GTAC	2 cut(s)	355, 401
DdeI	CTNAG	7 cut(s)	382, 464, 542, 888, 1134, 1161, 1524
DpnI	GATC	3 cut(s)	1084, 1125, 1204
DpnII	GATC	3 cut(s)	1082, 1123, 1202
DraI	TTTAAA	1 cut(s)	655
DrdI	GACNNNNNNGTC	1 cut(s)	468
DseDI	GACNNNNNNGTC	1 cut(s)	468
EaeI	YGGCCR	1 cut(s)	1366
Eco105I	TACGTA	1 cut(s)	1394
Eco130I	CCWWGG	4 cut(s)	64, 1036, 1198, 1471
Eco147I	AGGCCT	1 cut(s)	1702
Eco24I	GRGCYC	2 cut(s)	1169, 1610
Eco31I	GGTCTC	1 cut(s)	621
Eco47I	GGWCC	2 cut(s)	55, 61
Eco57I	CTGAAG	1 cut(s)	738
Eco81I	CCTNAGG	1 cut(s)	1161
Eco91I	GGTNACC	1 cut(s)	869
EcoO109I	RGGNCCY	1 cut(s)	266
EcoO65I	GGTNACC	1 cut(s)	869
EcoRI	GAATTC	1 cut(s)	1026
EcoRII	CCWGG	6 cut(s)	57, 135, 186, 958, 1205, 1602
EcoT14I	CCWWGG	4 cut(s)	64, 1036, 1198, 1471
EcoT22I	ATGCAT	1 cut(s)	790
EcoT38I	GRGCYC	2 cut(s)	1169, 1610
ErhI	CCWWGG	4 cut(s)	64, 1036, 1198, 1471
FalI	AAGNNNNNCTT	2 cut(s)	1525, 1557
FaqI	GGGAC	1 cut(s)	179
FauNDI	CATATG	1 cut(s)	1179
FblI	GTMKAC	2 cut(s)	770, 1226
Fnu4HI	GCNGC	6 cut(s)	505, 835, 918, 1485, 1488, 1575
FokI	GGATG	7 cut(s)	152, 1115, 1370, 1386, 1413, 1517, 1604
FriOI	GRGCYC	2 cut(s)	1169, 1610
Fsp4HI	GCNGC	6 cut(s)	505, 835, 918, 1485, 1488, 1575
FspAI	RTGCGCAY	1 cut(s)	749
FspBI	CTAG	5 cut(s)	35, 86, 518, 1049, 1472
FspI	TGCGCA	1 cut(s)	749
GlaI	GCGC	4 cut(s)	749, 940, 1196, 1373
GluI	GCNGC	6 cut(s)	505, 835, 918, 1485, 1488, 1575
GsaI	CCCAGC	1 cut(s)	448
GsuI	CTGGAG	2 cut(s)	1586, 1596
HaeIII	GGCC	5 cut(s)	267, 1338, 1368, 1647, 1702
HapII	CCGG	4 cut(s)	123, 743, 1015, 1335
HhaI	GCGC	4 cut(s)	750, 941, 1197, 1374
Hin6I	GCGC	4 cut(s)	748, 939, 1195, 1372
HinP1I	GCGC	4 cut(s)	748, 939, 1195, 1372
HinfI	GANTC	4 cut(s)	81, 317, 898, 1138
HpaII	CCGG	4 cut(s)	123, 743, 1015, 1335
HphI	GGTGA	7 cut(s)	32, 59, 320, 434, 881, 983, 1312
Hpy166II	GTNNAC	8 cut(s)	55, 425, 461, 705, 771, 1227, 1303, 1496
Hpy188I	TCNGA	1 cut(s)	1525
Hpy8I	GTNNAC	8 cut(s)	55, 425, 461, 705, 771, 1227, 1303, 1496
HpyAV	CCTTC	5 cut(s)	628, 677, 788, 928, 1467
HpyCH4III	ACNGT	6 cut(s)	184, 359, 702, 1235, 1500, 1712
HpyCH4IV	ACGT	1 cut(s)	1393
HpyCH4V	TGCA	9 cut(s)	736, 788, 920, 985, 1001, 1057, 1079, 1099, 1738
HpyF10VI	GCNNNNNNNGC	3 cut(s)	644, 914, 1194
HpyF3I	CTNAG	7 cut(s)	382, 464, 542, 888, 1134, 1161, 1524
HpySE526I	ACGT	1 cut(s)	1393
HspAI	GCGC	4 cut(s)	748, 939, 1195, 1372
Kzo9I	GATC	3 cut(s)	1082, 1123, 1202
LmnI	GCTCC	5 cut(s)	13, 365, 1550, 1571, 1640
Lsp1109I	GCAGC	5 cut(s)	516, 904, 1496, 1499, 1586
LweI	GCATC	7 cut(s)	199, 775, 895, 1093, 1495, 1582, 1725
MaeI	CTAG	5 cut(s)	35, 86, 518, 1049, 1472
MaeII	ACGT	1 cut(s)	1393
MaeIII	GTNAC	2 cut(s)	3, 869
MalI	GATC	3 cut(s)	1084, 1125, 1204
MboI	GATC	3 cut(s)	1082, 1123, 1202
MboII	GAAGA	1 cut(s)	533
MflI	RGATCY	2 cut(s)	1082, 1202
MhlI	GDGCHC	3 cut(s)	882, 1169, 1610
MlsI	TGGCCA	1 cut(s)	1368
MluCI	AATT	8 cut(s)	347, 373, 548, 692, 993, 1026, 1330, 1689
MluNI	TGGCCA	1 cut(s)	1368
MmeI	TCCRAC	2 cut(s)	1482, 1569
Mox20I	TGGCCA	1 cut(s)	1368
Mph1103I	ATGCAT	1 cut(s)	790
MscI	TGGCCA	1 cut(s)	1368
MseI	TTAA	4 cut(s)	623, 654, 663, 677
MslI	CAYNNNNRTG	1 cut(s)	1293
Msp20I	TGGCCA	1 cut(s)	1368
MspCI	CTTAAG	1 cut(s)	622
MspI	CCGG	4 cut(s)	123, 743, 1015, 1335
MspR9I	CCNGG	7 cut(s)	59, 137, 188, 960, 1015, 1207, 1604
Mva1269I	GAATGC	1 cut(s)	1059
MvaI	CCWGG	6 cut(s)	59, 137, 188, 960, 1207, 1604
MvnI	CGCG	1 cut(s)	834
MwoI	GCNNNNNNNGC	3 cut(s)	644, 914, 1194
NciI	CCSGG	1 cut(s)	1015
NdeI	CATATG	1 cut(s)	1179
NdeII	GATC	3 cut(s)	1082, 1123, 1202
NlaIV	GGNNCC	4 cut(s)	687, 861, 1189, 1204
NmuCI	GTSAC	2 cut(s)	3, 869
NsbI	TGCGCA	1 cut(s)	749
NsiI	ATGCAT	1 cut(s)	790
NspI	RCATGY	4 cut(s)	491, 1494, 1581, 1674
PagI	TCATGA	1 cut(s)	640
PceI	AGGCCT	1 cut(s)	1702
PciI	ACATGT	1 cut(s)	487
PctI	GAATGC	1 cut(s)	1059
PfeI	GAWTC	4 cut(s)	81, 317, 898, 1138
PflMI	CCANNNNNTGG	4 cut(s)	254, 603, 1037, 1375
PfoI	TCCNGGA	2 cut(s)	958, 1205
PkrI	GCNGC	6 cut(s)	506, 836, 919, 1486, 1489, 1576
Ppu21I	YACGTR	1 cut(s)	1394
PscI	ACATGT	1 cut(s)	487
PsiI	TTATAA	2 cut(s)	146, 912
Psp6I	CCWGG	6 cut(s)	57, 135, 186, 958, 1205, 1602
PspEI	GGTNACC	1 cut(s)	869
PspFI	CCCAGC	1 cut(s)	444
PspGI	CCWGG	6 cut(s)	57, 135, 186, 958, 1205, 1602
PspN4I	GGNNCC	4 cut(s)	687, 861, 1189, 1204
PspPI	GGNCC	3 cut(s)	55, 61, 266
PstI	CTGCAG	1 cut(s)	1101
PstNI	CAGNNNCTG	1 cut(s)	269
PsuI	RGATCY	2 cut(s)	1082, 1202
RsaI	GTAC	2 cut(s)	356, 402
RsaNI	GTAC	2 cut(s)	355, 401
RseI	CAYNNNNRTG	1 cut(s)	1293
SaqAI	TTAA	4 cut(s)	623, 654, 663, 677
SatI	GCNGC	6 cut(s)	505, 835, 918, 1485, 1488, 1575
Sau3AI	GATC	3 cut(s)	1082, 1123, 1202
Sau96I	GGNCC	3 cut(s)	55, 61, 266
ScrFI	CCNGG	7 cut(s)	59, 137, 188, 960, 1015, 1207, 1604
SduI	GDGCHC	3 cut(s)	882, 1169, 1610
SfaNI	GCATC	7 cut(s)	199, 775, 895, 1093, 1495, 1582, 1725
SfcI	CTRYAG	3 cut(s)	303, 1097, 1227
SinI	GGWCC	2 cut(s)	55, 61
SmiMI	CAYNNNNRTG	1 cut(s)	1293
SmlI	CTYRAG	3 cut(s)	622, 875, 1704
SmoI	CTYRAG	3 cut(s)	622, 875, 1704
SnaBI	TACGTA	1 cut(s)	1394
Sse9I	AATT	8 cut(s)	347, 373, 548, 692, 993, 1026, 1330, 1689
SseBI	AGGCCT	1 cut(s)	1702
SsiI	CCGC	1 cut(s)	834
SspI	AATATT	1 cut(s)	115
SspMI	CTAG	5 cut(s)	35, 86, 518, 1049, 1472
StuI	AGGCCT	1 cut(s)	1702
StyD4I	CCNGG	7 cut(s)	57, 135, 186, 958, 1013, 1205, 1602
StyI	CCWWGG	4 cut(s)	64, 1036, 1198, 1471
TaaI	ACNGT	6 cut(s)	184, 359, 702, 1235, 1500, 1712
TaiI	ACGT	1 cut(s)	1396
TaqI	TCGA	1 cut(s)	1634
TasI	AATT	8 cut(s)	347, 373, 548, 692, 993, 1026, 1330, 1689
TauI	GCSGC	1 cut(s)	837
TfiI	GAWTC	4 cut(s)	81, 317, 898, 1138
Tru1I	TTAA	4 cut(s)	623, 654, 663, 677
Tru9I	TTAA	4 cut(s)	623, 654, 663, 677
TscAI	CASTG	2 cut(s)	707, 1354
TseFI	GTSAC	2 cut(s)	3, 869
TseI	GCWGC	5 cut(s)	504, 917, 1484, 1487, 1574
Tsp45I	GTSAC	2 cut(s)	3, 869
TspDTI	ATGAA	6 cut(s)	377, 657, 806, 1374, 1399, 1533
TspGWI	ACGGA	1 cut(s)	1563
TspRI	CASTG	2 cut(s)	707, 1354
Van91I	CCANNNNNTGG	4 cut(s)	254, 603, 1037, 1375
Vha464I	CTTAAG	1 cut(s)	622
VpaK11BI	GGWCC	2 cut(s)	55, 61
XapI	RAATTY	3 cut(s)	993, 1026, 1330
XbaI	TCTAGA	1 cut(s)	34
XceI	RCATGY	4 cut(s)	491, 1494, 1581, 1674
XmaJI	CCTAGG	1 cut(s)	1471
XmiI	GTMKAC	2 cut(s)	770, 1226
XspI	CTAG	5 cut(s)	35, 86, 518, 1049, 1472
Zsp2I	ATGCAT	1 cut(s)	790

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.