Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0003725

Physical Location & Seq

Genomic Coordinates Forward (+)

8098002 .. 8103705

Gene Structure 5704 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g13530.t6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1896 bp

ATGAAGTATGTTTTGGTGACTGGTGGAGTTGTGAGTGGCCTTGGAAAAGGAGTCACTGCTAGTAGTATTGGTCTTCTCCTAAAGGCTTGTGGACTAAGGGTCACCTCCATCAAAATTGATCCTTACTTGAACACTGATGCTGGAACTATGTCACCTGTGGAGCATGGTGAAGTTTATGTTTTAGATGATGGTGGTGAGGTGGACCTGGACCTTGGAAACTATGAGCGATTCCTAGACATCAAGCTGACCCGTGATAATAATATAACTACCGGAAAGATTTACCAGGCTGTTATAAACAAAGAGAGAAAGGGGGATTATCTGGGAAAAACTGTCCAGGTTGTACCTCACATCACAGATGCTATCCAAGACTGGATTGAACGTGTAGCACATATACCAGTTGATGGAAAGTCAGGCCCTGCTGATGTTTGTGTTATAGAGTTGGGTGGAACTATAGGTGATATTGAATCCATGCCGTTTATTGAGGCATTAGGACAATTCTCGTACCGTGTAGGAGCTGATAATTTTTGCTTAGTTCATGTCAGCCTTGTGCCTGTTTTGAATGTTGTTGGTGAACAGAAAACAAAACCAACACAGCACAGTGTTCGTGGACTAAGATGTCTGGGTTTGACACCACATGTGATAGCTTGTCGCAGCACAACGCCACTAGAAGAAAATGTAAAGACCAAACTCAGTCAATTTTGCCATGTTCAGAAAGAGAACATCATCACTCTGTATGATGTTCCCAACATTTGGCACATTCCATTACTCTTAAGAGACCAGAAAGCTCATGAAGCAATCTTGAAAGTGTTTAACCTTCAGGGATTAACAAGGGAACCTGAATTAGAACAGTGGACTACTATGGCTGAAGTTTGTGATATGTTGCATGAGCCGGTGCGCATTGCCATAGTGGGGAAGTATACAAGTCTTTCTGATGCATACCTCTCTATACAAAAGGCTCTTGTGCATGCTTCTGTTTCTCGTGGCAAGAAACTTTTTGTGGATTGGGTTCCATCTGGTGACCTTGAGCCCACAACTGCGAAAGAGAATCCTGATGCTTCTAAAGCTGCATGGAAGTTGTTGAAGGGCGCAGATGGTATTCTTATTCCAGGAGGATTTGGTGACAGAGGAATGCAAGGGAAAATTCTTGCAGTAAAGTATGCCCGGGAAAAGAAAATTCCATTCCTCGGTATTTGTCTAGGAATGCAGGCCGCTGTGATTGAGTTTGCAAGATCTGTTCTTGGTCTGCAGGATGCCAACAGCACAGAATTTGATCCTGATACCAAGAATCCATGTGTTATATTCATGCCTGAGGGCTCAAAAACACATATGGGAGGCACCATGCGCCTTGGATCCAGGAGAACATATTTCCAGTCTACAGACTGCAAATCAGCTAAACTATATGGAAACAAACGCTTTATTGATGAGAGACATCGGCACAGATATGAGGTGAATCCTGACATGGTAACACGCCTTGAAACTTCCGGCCTCTCTTTCACTGGCAAGGATGAAACTGGCCGGCGCATGGAGATTGTTGAGCTACGTAATCATCCCTATTTCATCGGTGTCCAGTTCCATCCTGAATATAAATCAAGACCAGCAAAACCTTCTGCTTTATTCCAAGGGCTTATAGCAGCAGCATGTGGGCAGTTGGATGCTCTTTTACCAAGCTCTGAGAGGAAAAGGAGTGCATCATATGGAGCAGGCAACGATTTTGAAGGAGCATGTGGGCAGTTGGATGCTTTCCTCCAGGCCTCTCCAGAGGCGAAAAGGAATGTTCCGAATGGAGCAGGGCACGATGTATATACAGCCAAAACATGCCAAAATGGAGGTGCAACCAAACTTACTAATAGACCTCAAGACGGTGTGTACAGCATTTTTAACGGGATGCACTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003883 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006241 GO:0006629 GO:0006644 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009141 GO:0009142 GO:0009147 GO:0009148 GO:0009163 GO:0009165 GO:0009199 GO:0009201 GO:0009208 GO:0009209 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016874 GO:0016879 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019856 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044271 GO:0044281 GO:0044283 GO:0046036 GO:0046112 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00240 ko01100 map00240 map01100

Pfam Domains

Protein Families

CTP_synth_N GATase

Protein Analysis

632

Amino Acids

69.2

Weight (kDa)

7.88

Isoelectric Point (pI)

38.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CTP_synth_N	PF06418	2 - 272	6.4e-124	CTP synthase N-terminus
GATase	PF00117	309 - 483	7.6e-28	Glutamine amidotransferase class-I

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003725)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30820 AT2G34890 AT4G20320 AT4G20320 AT4G20320 AT4G20320 AT4G20320 AT4G20320
fragaria_vesca	FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530 FvH4_3g13530
malus_domestica	MD00G1085100.v1.1 MD10G1221000.v1.1
prunus_persica	Prupe.4G123500_v2.0.a1 Prupe.4G123500_v2.0.a1 Prupe.4G123500_v2.0.a1 Prupe.4G123500_v2.0.a1
pyrus_communis	pycom05g21790 pycom10g18670
rosa_chinensis	RchiOBHm_Chr5g0022491
rosa_laevigata	RLG00000032665
rosa_multiflora	Rmu_sc0001514.1_g000012
rosa_roxburghii	Rroxscaffold_1G00056550
rosa_rugosa	Rorug05G0074200
rosa_samantha	Rh5AG161000 Rh5CG174300 Rh5DG160600
rosa_wichuraiana	Rw5G014350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	293
AasI	GACNNNNNNGTC	1 cut(s)	615
Acc16I	TGCGCA	1 cut(s)	896
AccB1I	GGYRCC	1 cut(s)	1334
AccB7I	CCANNNNNTGG	2 cut(s)	401, 750
AccI	GTMKAC	2 cut(s)	917, 1373
AciI	CCGC	1 cut(s)	1209
AclWI	GGATC	4 cut(s)	113, 1265, 1344, 1357
AcoI	YGGCCR	1 cut(s)	1513
AcsI	RAATTY	3 cut(s)	1140, 1173, 1265
AcuI	CTGAAG	2 cut(s)	800, 885
AfaI	GTAC	3 cut(s)	342, 503, 1868
AfiI	CCNNNNNNNGG	6 cut(s)	401, 750, 909, 1184, 1522, 1859
AflII	CTTAAG	1 cut(s)	769
AflIII	ACRYGT	2 cut(s)	379, 634
AgsI	TTSAA	8 cut(s)	130, 377, 464, 559, 802, 1081, 1475, 1715
AhdI	GACNNNNNGTC	1 cut(s)	98
AjnI	CCWGG	6 cut(s)	204, 282, 333, 1105, 1352, 1746
AjuI	GAANNNNNNNTTGG	1 cut(s)	28
AluBI	AGCT	8 cut(s)	244, 515, 644, 785, 1064, 1391, 1537, 1668
AluI	AGCT	8 cut(s)	244, 515, 644, 785, 1064, 1391, 1537, 1668
Alw26I	GTCTC	2 cut(s)	768, 1420
AlwI	GGATC	4 cut(s)	113, 1265, 1344, 1357
AlwNI	CAGNNNCTG	1 cut(s)	416
Ama87I	CYCGRG	1 cut(s)	1161
AoxI	GGCC	6 cut(s)	37, 412, 1206, 1483, 1513, 1749
ApeKI	GCWGC	4 cut(s)	651, 1064, 1631, 1634
ApoI	RAATTY	3 cut(s)	1140, 1173, 1265
AspLEI	GCGC	4 cut(s)	897, 1088, 1344, 1521
AspS9I	GGNCC	3 cut(s)	202, 208, 413
AsuC2I	CCSGG	2 cut(s)	1162, 1163
AvaI	CYCGRG	1 cut(s)	1161
AvaII	GGWCC	2 cut(s)	202, 208
AxyI	CCTNAGG	1 cut(s)	1308
BaeGI	GKGCMC	1 cut(s)	1794
BamHI	GGATCC	1 cut(s)	1349
BanI	GGYRCC	1 cut(s)	1334
BanII	GRGCYC	2 cut(s)	1029, 1316
BauI	CACGAG	1 cut(s)	978
BbsI	GAAGAC	1 cut(s)	65
BbvI	GCAGC	4 cut(s)	663, 1051, 1643, 1646
BccI	CCATC	6 cut(s)	116, 182, 395, 1018, 1085, 1581
BceAI	ACGGC	1 cut(s)	457
BcgI	CGANNNNNNTGC	2 cut(s)	584, 618
BciT130I	CCWGG	6 cut(s)	206, 284, 335, 1107, 1354, 1748
BcnI	CCSGG	2 cut(s)	1162, 1163
BcoDI	GTCTC	2 cut(s)	768, 1420
BfaI	CTAG	4 cut(s)	60, 233, 665, 1196
BfmI	CTRYAG	3 cut(s)	450, 1244, 1374
BfrI	CTTAAG	1 cut(s)	769
BglII	AGATCT	1 cut(s)	1229
BisI	GCNGC	5 cut(s)	652, 1065, 1209, 1632, 1635
BlsI	GCNGC	5 cut(s)	653, 1066, 1210, 1633, 1636
Bme1390I	CCNGG	8 cut(s)	206, 284, 335, 1107, 1162, 1163, 1354, 1748
Bme18I	GGWCC	2 cut(s)	202, 208
BmeRI	GACNNNNNGTC	1 cut(s)	98
BmeT110I	CYCGRG	1 cut(s)	1161
BmgT120I	GGNCC	3 cut(s)	202, 208, 413
BmiI	GGNNCC	4 cut(s)	834, 1008, 1336, 1351
BmrFI	CCNGG	8 cut(s)	206, 284, 335, 1107, 1162, 1163, 1354, 1748
BmsI	GCATC	9 cut(s)	127, 346, 922, 1042, 1240, 1642, 1697, 1726, 1875
BpiI	GAAGAC	1 cut(s)	65
BpmI	CTGGAG	2 cut(s)	1730, 1740
BpuEI	CTTGAG	2 cut(s)	1043, 1839
BpuMI	CCSGG	2 cut(s)	1162, 1163
BsaAI	YACGTR	1 cut(s)	1541
BsaI	GGTCTC	1 cut(s)	768
BsaJI	CCNNGG	6 cut(s)	40, 211, 1161, 1183, 1345, 1618
BsaWI	WCCGGW	1 cut(s)	269
Bsc4I	CCNNNNNNNGG	6 cut(s)	401, 750, 909, 1184, 1522, 1859
Bse118I	RCCGGY	2 cut(s)	889, 1515
Bse1I	ACTGG	7 cut(s)	25, 374, 395, 1369, 1501, 1516, 1567
Bse21I	CCTNAGG	1 cut(s)	1308
Bse3DI	GCAATG	1 cut(s)	897
BseBI	CCWGG	6 cut(s)	206, 284, 335, 1107, 1354, 1748
BseDI	CCNNGG	6 cut(s)	40, 211, 1161, 1183, 1345, 1618
BseGI	GGATG	7 cut(s)	1255, 1510, 1546, 1573, 1657, 1741, 1890
BseLI	CCNNNNNNNGG	6 cut(s)	401, 750, 909, 1184, 1522, 1859
BseMI	GCAATG	1 cut(s)	897
BseMII	CTCAG	3 cut(s)	703, 1299, 1662
BseNI	ACTGG	7 cut(s)	25, 374, 395, 1369, 1501, 1516, 1567
BseSI	GKGCMC	1 cut(s)	1794
BseXI	GCAGC	4 cut(s)	663, 1051, 1643, 1646
BshFI	GGCC	6 cut(s)	39, 414, 1208, 1485, 1515, 1751
BshNI	GGYRCC	1 cut(s)	1334
BsiHKCI	CYCGRG	1 cut(s)	1161
BsiSI	CCGG	5 cut(s)	270, 890, 1162, 1482, 1516
BslI	CCNNNNNNNGG	6 cut(s)	401, 750, 909, 1184, 1522, 1859
BsmAI	GTCTC	2 cut(s)	768, 1420
BsmI	GAATGC	2 cut(s)	1134, 1206
BsnI	GGCC	6 cut(s)	39, 414, 1208, 1485, 1515, 1751
Bso31I	GGTCTC	1 cut(s)	768
BsoBI	CYCGRG	1 cut(s)	1161
Bsp1286I	GDGCHC	3 cut(s)	1029, 1316, 1794
Bsp1407I	TGTACA	1 cut(s)	1866
Bsp143I	GATC	4 cut(s)	118, 1229, 1270, 1349
BspACI	CCGC	1 cut(s)	1209
BspANI	GGCC	6 cut(s)	39, 414, 1208, 1485, 1515, 1751
BspCNI	CTCAG	3 cut(s)	702, 1300, 1663
BspHI	TCATGA	1 cut(s)	787
BspLI	GGNNCC	4 cut(s)	834, 1008, 1336, 1351
BspMAI	CTGCAG	1 cut(s)	1248
BspPI	GGATC	4 cut(s)	113, 1265, 1344, 1357
BspT107I	GGYRCC	1 cut(s)	1334
BspTI	CTTAAG	1 cut(s)	769
BspTNI	GGTCTC	1 cut(s)	768
BsrDI	GCAATG	1 cut(s)	897
BsrFI	RCCGGY	2 cut(s)	889, 1515
BsrGI	TGTACA	1 cut(s)	1866
BsrI	ACTGG	7 cut(s)	25, 374, 395, 1369, 1501, 1516, 1567
BssAI	RCCGGY	2 cut(s)	889, 1515
BssECI	CCNNGG	6 cut(s)	40, 211, 1161, 1183, 1345, 1618
BssMI	GATC	4 cut(s)	118, 1229, 1270, 1349
BssNAI	GTATAC	1 cut(s)	918
BssSI	CACGAG	1 cut(s)	978
BssT1I	CCWWGG	4 cut(s)	40, 211, 1345, 1618
Bst1107I	GTATAC	1 cut(s)	918
Bst2BI	CACGAG	1 cut(s)	978
Bst2UI	CCWGG	6 cut(s)	206, 284, 335, 1107, 1354, 1748
Bst4CI	ACNGT	5 cut(s)	331, 506, 599, 849, 1862
BstAFI	CTTAAG	1 cut(s)	769
BstAUI	TGTACA	1 cut(s)	1866
BstBAI	YACGTR	1 cut(s)	1541
BstC8I	GCNNGC	4 cut(s)	966, 1206, 1517, 1702
BstDEI	CTNAG	6 cut(s)	95, 529, 611, 689, 1308, 1671
BstEII	GGTNACC	2 cut(s)	100, 1016
BstF5I	GGATG	7 cut(s)	1255, 1510, 1546, 1573, 1657, 1741, 1890
BstHHI	GCGC	4 cut(s)	897, 1088, 1344, 1521
BstKTI	GATC	4 cut(s)	121, 1232, 1273, 1352
BstMAI	GTCTC	2 cut(s)	768, 1420
BstMBI	GATC	4 cut(s)	118, 1229, 1270, 1349
BstMWI	GCNNNNNNNGC	3 cut(s)	791, 1061, 1341
BstNI	CCWGG	6 cut(s)	206, 284, 335, 1107, 1354, 1748
BstNSI	RCATGY	5 cut(s)	638, 968, 1641, 1725, 1818
BstPI	GGTNACC	2 cut(s)	100, 1016
BstSCI	CCNGG	8 cut(s)	204, 282, 333, 1105, 1160, 1161, 1352, 1746
BstSFI	CTRYAG	3 cut(s)	450, 1244, 1374
BstSLI	GKGCMC	1 cut(s)	1794
BstSNI	TACGTA	1 cut(s)	1541
BstV1I	GCAGC	4 cut(s)	663, 1051, 1643, 1646
BstV2I	GAAGAC	1 cut(s)	65
BstX2I	RGATCY	2 cut(s)	1229, 1349
BstYI	RGATCY	2 cut(s)	1229, 1349
BstZ17I	GTATAC	1 cut(s)	918
Bsu36I	CCTNAGG	1 cut(s)	1308
BsuRI	GGCC	6 cut(s)	39, 414, 1208, 1485, 1515, 1751
BtsCI	GGATG	7 cut(s)	1255, 1510, 1546, 1573, 1657, 1741, 1890
BtsI	GCAGTG	1 cut(s)	54
BtsIMutI	CAGTG	5 cut(s)	54, 132, 604, 854, 1494
Cac8I	GCNNGC	4 cut(s)	966, 1206, 1517, 1702
CaiI	CAGNNNCTG	1 cut(s)	416
CciI	TCATGA	1 cut(s)	787
CfoI	GCGC	4 cut(s)	897, 1088, 1344, 1521
Cfr10I	RCCGGY	2 cut(s)	889, 1515
Cfr13I	GGNCC	3 cut(s)	202, 208, 413
Cfr9I	CCCGGG	1 cut(s)	1161
Csp6I	GTAC	3 cut(s)	341, 502, 1867
CviQI	GTAC	3 cut(s)	341, 502, 1867
DdeI	CTNAG	6 cut(s)	95, 529, 611, 689, 1308, 1671
DpnI	GATC	4 cut(s)	120, 1231, 1272, 1351
DpnII	GATC	4 cut(s)	118, 1229, 1270, 1349
DrdI	GACNNNNNNGTC	1 cut(s)	615
DriI	GACNNNNNGTC	1 cut(s)	98
DseDI	GACNNNNNNGTC	1 cut(s)	615
EaeI	YGGCCR	1 cut(s)	1513
Eam1105I	GACNNNNNGTC	1 cut(s)	98
Eco105I	TACGTA	1 cut(s)	1541
Eco130I	CCWWGG	4 cut(s)	40, 211, 1345, 1618
Eco147I	AGGCCT	1 cut(s)	1751
Eco24I	GRGCYC	2 cut(s)	1029, 1316
Eco31I	GGTCTC	1 cut(s)	768
Eco47I	GGWCC	2 cut(s)	202, 208
Eco57I	CTGAAG	2 cut(s)	800, 885
Eco81I	CCTNAGG	1 cut(s)	1308
Eco88I	CYCGRG	1 cut(s)	1161
Eco91I	GGTNACC	2 cut(s)	100, 1016
EcoO109I	RGGNCCY	1 cut(s)	413
EcoO65I	GGTNACC	2 cut(s)	100, 1016
EcoRII	CCWGG	6 cut(s)	204, 282, 333, 1105, 1352, 1746
EcoT14I	CCWWGG	4 cut(s)	40, 211, 1345, 1618
EcoT22I	ATGCAT	1 cut(s)	937
EcoT38I	GRGCYC	2 cut(s)	1029, 1316
ErhI	CCWWGG	4 cut(s)	40, 211, 1345, 1618
FauNDI	CATATG	2 cut(s)	1326, 1693
FblI	GTMKAC	2 cut(s)	917, 1373
Fnu4HI	GCNGC	5 cut(s)	652, 1065, 1209, 1632, 1635
FokI	GGATG	6 cut(s)	1262, 1517, 1533, 1560, 1664, 1748
FriOI	GRGCYC	2 cut(s)	1029, 1316
Fsp4HI	GCNGC	5 cut(s)	652, 1065, 1209, 1632, 1635
FspAI	RTGCGCAY	1 cut(s)	896
FspBI	CTAG	4 cut(s)	60, 233, 665, 1196
FspI	TGCGCA	1 cut(s)	896
GlaI	GCGC	4 cut(s)	896, 1087, 1343, 1520
GluI	GCNGC	5 cut(s)	652, 1065, 1209, 1632, 1635
GsuI	CTGGAG	2 cut(s)	1730, 1740
HaeIII	GGCC	6 cut(s)	39, 414, 1208, 1485, 1515, 1751
HapII	CCGG	5 cut(s)	270, 890, 1162, 1482, 1516
HhaI	GCGC	4 cut(s)	897, 1088, 1344, 1521
Hin6I	GCGC	4 cut(s)	895, 1086, 1342, 1519
HinP1I	GCGC	4 cut(s)	895, 1086, 1342, 1519
HinfI	GANTC	6 cut(s)	51, 228, 464, 1045, 1285, 1450
HpaII	CCGG	5 cut(s)	270, 890, 1162, 1482, 1516
Hpy166II	GTNNAC	8 cut(s)	92, 202, 572, 608, 852, 918, 1374, 1867
Hpy188I	TCNGA	4 cut(s)	711, 931, 1672, 1779
Hpy188III	TCNNGA	9 cut(s)	788, 799, 1049, 1274, 1454, 1577, 1590, 1757, 1856
Hpy8I	GTNNAC	8 cut(s)	92, 202, 572, 608, 852, 918, 1374, 1867
HpyAV	CCTTC	4 cut(s)	824, 1075, 1614, 1709
HpyCH4III	ACNGT	5 cut(s)	331, 506, 599, 849, 1862
HpyCH4IV	ACGT	2 cut(s)	379, 1540
HpyF10VI	GCNNNNNNNGC	3 cut(s)	791, 1061, 1341
HpyF3I	CTNAG	6 cut(s)	95, 529, 611, 689, 1308, 1671
HpySE526I	ACGT	2 cut(s)	379, 1540
HspAI	GCGC	4 cut(s)	895, 1086, 1342, 1519
KroI	GCCGGC	1 cut(s)	1515
KroNI	GCCGGC	1 cut(s)	1517
Kzo9I	GATC	4 cut(s)	118, 1229, 1270, 1349
LmnI	GCTCC	5 cut(s)	160, 512, 1697, 1718, 1784
Lsp1109I	GCAGC	4 cut(s)	663, 1051, 1643, 1646
LweI	GCATC	9 cut(s)	127, 346, 922, 1042, 1240, 1642, 1697, 1726, 1875
MaeI	CTAG	4 cut(s)	60, 233, 665, 1196
MaeII	ACGT	2 cut(s)	379, 1540
MaeIII	GTNAC	7 cut(s)	16, 52, 100, 150, 1016, 1118, 1462
MalI	GATC	4 cut(s)	120, 1231, 1272, 1351
MboI	GATC	4 cut(s)	118, 1229, 1270, 1349
MboII	GAAGA	2 cut(s)	65, 680
MflI	RGATCY	2 cut(s)	1229, 1349
MhlI	GDGCHC	3 cut(s)	1029, 1316, 1794
MluCI	AATT	8 cut(s)	114, 494, 520, 695, 839, 1140, 1173, 1265
MlyI	GAGTC	1 cut(s)	60
MmeI	TCCRAC	2 cut(s)	1629, 1713
Mph1103I	ATGCAT	1 cut(s)	937
MroNI	GCCGGC	1 cut(s)	1515
MseI	TTAA	4 cut(s)	770, 810, 824, 1878
MslI	CAYNNNNRTG	1 cut(s)	1440
MspA1I	CMGCKG	1 cut(s)	1211
MspCI	CTTAAG	1 cut(s)	769
MspI	CCGG	5 cut(s)	270, 890, 1162, 1482, 1516
MspR9I	CCNGG	8 cut(s)	206, 284, 335, 1107, 1162, 1163, 1354, 1748
Mva1269I	GAATGC	2 cut(s)	1134, 1206
MvaI	CCWGG	6 cut(s)	206, 284, 335, 1107, 1354, 1748
MwoI	GCNNNNNNNGC	3 cut(s)	791, 1061, 1341
NaeI	GCCGGC	1 cut(s)	1517
NciI	CCSGG	2 cut(s)	1162, 1163
NdeI	CATATG	2 cut(s)	1326, 1693
NdeII	GATC	4 cut(s)	118, 1229, 1270, 1349
NgoMIV	GCCGGC	1 cut(s)	1515
NlaIV	GGNNCC	4 cut(s)	834, 1008, 1336, 1351
NmuCI	GTSAC	6 cut(s)	16, 52, 100, 150, 1016, 1118
NsbI	TGCGCA	1 cut(s)	896
NsiI	ATGCAT	1 cut(s)	937
NspI	RCATGY	5 cut(s)	638, 968, 1641, 1725, 1818
PaeI	GCATGC	1 cut(s)	968
PagI	TCATGA	1 cut(s)	787
PceI	AGGCCT	1 cut(s)	1751
PciI	ACATGT	1 cut(s)	634
PctI	GAATGC	2 cut(s)	1134, 1206
PdiI	GCCGGC	1 cut(s)	1517
PfeI	GAWTC	5 cut(s)	228, 464, 1045, 1285, 1450
PflMI	CCANNNNNTGG	2 cut(s)	401, 750
PfoI	TCCNGGA	2 cut(s)	1105, 1352
PkrI	GCNGC	5 cut(s)	653, 1066, 1210, 1633, 1636
PleI	GAGTC	1 cut(s)	59
PpsI	GAGTC	1 cut(s)	59
Ppu21I	YACGTR	1 cut(s)	1541
PscI	ACATGT	1 cut(s)	634
PsiI	TTATAA	1 cut(s)	293
Psp6I	CCWGG	6 cut(s)	204, 282, 333, 1105, 1352, 1746
PspEI	GGTNACC	2 cut(s)	100, 1016
PspGI	CCWGG	6 cut(s)	204, 282, 333, 1105, 1352, 1746
PspN4I	GGNNCC	4 cut(s)	834, 1008, 1336, 1351
PspPI	GGNCC	3 cut(s)	202, 208, 413
PstI	CTGCAG	1 cut(s)	1248
PstNI	CAGNNNCTG	1 cut(s)	416
PsuI	RGATCY	2 cut(s)	1229, 1349
RsaI	GTAC	3 cut(s)	342, 503, 1868
RsaNI	GTAC	3 cut(s)	341, 502, 1867
RseI	CAYNNNNRTG	1 cut(s)	1440
SaqAI	TTAA	4 cut(s)	770, 810, 824, 1878
SatI	GCNGC	5 cut(s)	652, 1065, 1209, 1632, 1635
Sau3AI	GATC	4 cut(s)	118, 1229, 1270, 1349
Sau96I	GGNCC	3 cut(s)	202, 208, 413
SchI	GAGTC	1 cut(s)	60
ScrFI	CCNGG	8 cut(s)	206, 284, 335, 1107, 1162, 1163, 1354, 1748
SduI	GDGCHC	3 cut(s)	1029, 1316, 1794
SfaNI	GCATC	9 cut(s)	127, 346, 922, 1042, 1240, 1642, 1697, 1726, 1875
SfcI	CTRYAG	3 cut(s)	450, 1244, 1374
SinI	GGWCC	2 cut(s)	202, 208
SmaI	CCCGGG	1 cut(s)	1163
SmiMI	CAYNNNNRTG	1 cut(s)	1440
SmlI	CTYRAG	3 cut(s)	769, 1022, 1854
SmoI	CTYRAG	3 cut(s)	769, 1022, 1854
SnaBI	TACGTA	1 cut(s)	1541
SphI	GCATGC	1 cut(s)	968
Sse9I	AATT	8 cut(s)	114, 494, 520, 695, 839, 1140, 1173, 1265
SseBI	AGGCCT	1 cut(s)	1751
SsiI	CCGC	1 cut(s)	1209
SspMI	CTAG	4 cut(s)	60, 233, 665, 1196
StuI	AGGCCT	1 cut(s)	1751
StyD4I	CCNGG	8 cut(s)	204, 282, 333, 1105, 1160, 1161, 1352, 1746
StyI	CCWWGG	4 cut(s)	40, 211, 1345, 1618
TaaI	ACNGT	5 cut(s)	331, 506, 599, 849, 1862
TaiI	ACGT	2 cut(s)	382, 1543
TasI	AATT	8 cut(s)	114, 494, 520, 695, 839, 1140, 1173, 1265
TatI	WGTACW	1 cut(s)	1866
TauI	GCSGC	1 cut(s)	1211
TfiI	GAWTC	5 cut(s)	228, 464, 1045, 1285, 1450
Tru1I	TTAA	4 cut(s)	770, 810, 824, 1878
Tru9I	TTAA	4 cut(s)	770, 810, 824, 1878
TscAI	CASTG	5 cut(s)	61, 139, 604, 854, 1501
TseFI	GTSAC	6 cut(s)	16, 52, 100, 150, 1016, 1118
TseI	GCWGC	4 cut(s)	651, 1064, 1631, 1634
Tsp45I	GTSAC	6 cut(s)	16, 52, 100, 150, 1016, 1118
TspDTI	ATGAA	6 cut(s)	17, 524, 804, 1291, 1521, 1546
TspMI	CCCGGG	1 cut(s)	1161
TspRI	CASTG	5 cut(s)	61, 139, 604, 854, 1501
Van91I	CCANNNNNTGG	2 cut(s)	401, 750
Vha464I	CTTAAG	1 cut(s)	769
VpaK11BI	GGWCC	2 cut(s)	202, 208
XapI	RAATTY	3 cut(s)	1140, 1173, 1265
XceI	RCATGY	5 cut(s)	638, 968, 1641, 1725, 1818
XmaI	CCCGGG	1 cut(s)	1161
XmiI	GTMKAC	2 cut(s)	917, 1373
XspI	CTAG	4 cut(s)	60, 233, 665, 1196
Zsp2I	ATGCAT	1 cut(s)	937

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.