Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0013957

Physical Location & Seq

Genomic Coordinates Forward (+)

15641906 .. 15644143

Gene Structure 2238 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G37250.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 855 bp

ATGGCGAGATTAGTGCGTGTGGCTAGATCCTCCTCCCTCTTTGGCTTTGGTAACCGTTTCTACTCTACTTCAGCCGAAGCTAGCCACGCGTCGTCGCCTTCGCCGTTTCTTCACGGCGGCGGAGCTAGCAGGGTTGCTCCGAAAGATAGAAATGTTCAGTGGGTGTTTTTGGGATGTCCTGGTGTTGGAAAAGGAACTTACGCTAGTAGACTATCAACCCTTCTCGGCGTTCCTCACATCGCCACCGGCGATCTCGTCCGTGAAGAGCTTGCATCTTCTGGACCTCTCTCTCAAAAGCTATCGGAGATTGTAAATCAGGGAAAATTGGTTTCTGATGAGATCATTGTAGACTTATTGTCCAAAAGACTTGAGGCTGGTGAAGCTAGAGGTGAATCAGGGTTTATCCTTGATGGCTTTCCTCGTACCATGAGACAAGCTGAAATACTGGGAGATGTAACTGACATCGATTTGGTGGTGAATTTGAAGCTTCCTGAGGAAGTTTTGGTTGACAAATGCCTTGGAAGGAGAACATGTAGTCAATGTGGCAAGGGTTTTAATGTAGCTCACATCAACTTAAAGGGTGAGAATGGAAGACCTGGAATTAGTATGGATCCACTTCTCCCTCCACATCAATGTATGTCAAAGCTTGTCACTCGAGCTGATGATACTGAAGAGGTGGTGAAAGCAAGGCTTCGTATATACAATGAAACGAGCCAGCCTCTTGAAGAATACTACCGTACCAAGGGAAAGCTTATGGAGTTTGACTTACCTGGAGGCATCCCAGAGTCATGGCCAAGGCTATTGGAAGCTTTAAGGCTTGACGATTACGAGGAGAAACAGTCTGTCGCAGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004017 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006082 GO:0006139 GO:0006520 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009117 GO:0009123 GO:0009165 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016053 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016776 GO:0018130 GO:0019205 GO:0019438 GO:0019637 GO:0019752 GO:0022622 GO:0032501 GO:0032502 GO:0034641 GO:0034654 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046483 GO:0046940 GO:0048364 GO:0048367 GO:0048731 GO:0048856 GO:0050145 GO:0055086 GO:0071704 GO:0090407 GO:0099402 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00230 ko00730 ko01100 ko01110 ko01130 map00230 map00730 map01100 map01110 map01130

Pfam Domains

Protein Families

ADK

Protein Analysis

284

Amino Acids

31.04

Weight (kDa)

6.26

Isoelectric Point (pI)

45.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ADK	PF00406	57 - 249	1.7e-39	Adenylate kinase
AAA_17	PF13207	57 - 177	5.5e-22	AAA domain
AAA_18	PF13238	57 - 178	2.1e-06	AAA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013957)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37250
fragaria_vesca	FvH4_6g15070
malus_domestica	MD04G1113300.v1.1
prunus_persica	Prupe.6G244100_v2.0.a1 Prupe.6G244100_v2.0.a1
pyrus_communis	pycom04g10200 pycom12g12510
rosa_chinensis	RchiOBHm_Chr3g0468251
rosa_laevigata	RLG00000024438
rosa_multiflora	Rmu_sc0004524.1_g000001 Rmu_sc0005436.1_g000003
rosa_roxburghii	Rroxscaffold_6G00412860
rosa_rugosa	Rorug03G0094700
rosa_samantha	Rh3AG142200 Rh3BG163800 Rh3DG164400
rosa_wichuraiana	Rw3G013460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	208, 348
AccII	CGCG	1 cut(s)	89
AciI	CCGC	2 cut(s)	117, 120
AclWI	GGATC	3 cut(s)	21, 605, 618
AcoI	YGGCCR	1 cut(s)	791
AcsI	RAATTY	1 cut(s)	478
AcuI	CTGAAG	2 cut(s)	54, 690
AfaI	GTAC	2 cut(s)	424, 739
AfiI	CCNNNNNNNGG	2 cut(s)	185, 742
AflIII	ACRYGT	2 cut(s)	87, 530
AgsI	TTSAA	2 cut(s)	484, 725
AhdI	GACNNNNNGTC	1 cut(s)	355
AjnI	CCWGG	3 cut(s)	178, 595, 769
Alw26I	GTCTC	1 cut(s)	424
AlwI	GGATC	3 cut(s)	21, 605, 618
Ama87I	CYCGRG	1 cut(s)	654
AoxI	GGCC	1 cut(s)	791
ApeKI	GCWGC	1 cut(s)	848
ApoI	RAATTY	1 cut(s)	478
AspS9I	GGNCC	1 cut(s)	281
AsuHPI	GGTGA	5 cut(s)	389, 401, 487, 593, 691
AsuNHI	GCTAGC	2 cut(s)	80, 125
AvaI	CYCGRG	1 cut(s)	654
AvaII	GGWCC	1 cut(s)	281
AxyI	CCTNAGG	1 cut(s)	492
BaeI	ACNNNNGTAYC	2 cut(s)	721, 754
BalI	TGGCCA	1 cut(s)	793
BamHI	GGATCC	1 cut(s)	610
BbsI	GAAGAC	1 cut(s)	598
BccI	CCATC	1 cut(s)	404
BceAI	ACGGC	2 cut(s)	88, 130
BcgI	CGANNNNNNTGC	1 cut(s)	29
BciT130I	CCWGG	3 cut(s)	180, 597, 771
BcoDI	GTCTC	1 cut(s)	424
BfaI	CTAG	5 cut(s)	24, 81, 126, 204, 384
BisI	GCNGC	2 cut(s)	118, 849
BlsI	GCNGC	2 cut(s)	119, 850
Bme1390I	CCNGG	3 cut(s)	180, 597, 771
Bme18I	GGWCC	1 cut(s)	281
BmeRI	GACNNNNNGTC	1 cut(s)	355
BmeT110I	CYCGRG	1 cut(s)	654
BmgT120I	GGNCC	1 cut(s)	281
BmiI	GGNNCC	1 cut(s)	612
BmrFI	CCNGG	3 cut(s)	180, 597, 771
BmrI	ACTGGG	1 cut(s)	455
BmsI	GCATC	2 cut(s)	281, 786
BmtI	GCTAGC	2 cut(s)	84, 129
BmuI	ACTGGG	1 cut(s)	455
BpiI	GAAGAC	1 cut(s)	598
BplI	GAGNNNNNCTC	2 cut(s)	703, 735
BpmI	CTGGAG	1 cut(s)	792
BpuEI	CTTGAG	1 cut(s)	389
Bsa29I	ATCGAT	1 cut(s)	465
BsaJI	CCNNGG	3 cut(s)	517, 741, 794
BsaXI	ACNNNNNCTCC	4 cut(s)	517, 547, 824, 854
Bsc4I	CCNNNNNNNGG	2 cut(s)	185, 742
Bse118I	RCCGGY	1 cut(s)	245
Bse1I	ACTGG	1 cut(s)	450
Bse21I	CCTNAGG	1 cut(s)	492
BseBI	CCWGG	3 cut(s)	180, 597, 771
BseCI	ATCGAT	1 cut(s)	465
BseDI	CCNNGG	3 cut(s)	517, 741, 794
BseGI	GGATG	2 cut(s)	179, 777
BseLI	CCNNNNNNNGG	2 cut(s)	185, 742
BseMII	CTCAG	1 cut(s)	483
BseNI	ACTGG	1 cut(s)	450
BseRI	GAGGAG	2 cut(s)	22, 845
Bsh1236I	CGCG	1 cut(s)	89
BshFI	GGCC	1 cut(s)	793
BshVI	ATCGAT	1 cut(s)	465
BsiHKCI	CYCGRG	1 cut(s)	654
BsiSI	CCGG	1 cut(s)	246
BslI	CCNNNNNNNGG	2 cut(s)	185, 742
BsmAI	GTCTC	1 cut(s)	424
BsnI	GGCC	1 cut(s)	793
BsoBI	CYCGRG	1 cut(s)	654
Bsp143I	GATC	4 cut(s)	26, 250, 339, 610
BspACI	CCGC	2 cut(s)	117, 120
BspANI	GGCC	1 cut(s)	793
BspCNI	CTCAG	1 cut(s)	484
BspDI	ATCGAT	1 cut(s)	465
BspFNI	CGCG	1 cut(s)	89
BspLI	GGNNCC	1 cut(s)	612
BspOI	GCTAGC	2 cut(s)	84, 129
BspPI	GGATC	3 cut(s)	21, 605, 618
BspQI	GCTCTTC	1 cut(s)	258
BsrFI	RCCGGY	1 cut(s)	245
BsrI	ACTGG	1 cut(s)	450
BssAI	RCCGGY	1 cut(s)	245
BssECI	CCNNGG	3 cut(s)	517, 741, 794
BssMI	GATC	4 cut(s)	26, 250, 339, 610
BssT1I	CCWWGG	3 cut(s)	517, 741, 794
Bst2UI	CCWGG	3 cut(s)	180, 597, 771
Bst4CI	ACNGT	3 cut(s)	56, 737, 840
Bst6I	CTCTTC	2 cut(s)	258, 666
BstC8I	GCNNGC	4 cut(s)	82, 127, 270, 716
BstDEI	CTNAG	1 cut(s)	492
BstEII	GGTNACC	1 cut(s)	50
BstF5I	GGATG	2 cut(s)	179, 777
BstFNI	CGCG	1 cut(s)	89
BstKTI	GATC	4 cut(s)	29, 253, 342, 613
BstMAI	GTCTC	1 cut(s)	424
BstMBI	GATC	4 cut(s)	26, 250, 339, 610
BstMWI	GCNNNNNNNGC	3 cut(s)	86, 126, 380
BstNI	CCWGG	3 cut(s)	180, 597, 771
BstNSI	RCATGY	1 cut(s)	534
BstPI	GGTNACC	1 cut(s)	50
BstSCI	CCNGG	3 cut(s)	178, 595, 769
BstUI	CGCG	1 cut(s)	89
BstV2I	GAAGAC	1 cut(s)	598
BstX2I	RGATCY	2 cut(s)	26, 610
BstXI	CCANNNNNNTGG	1 cut(s)	789
BstYI	RGATCY	2 cut(s)	26, 610
Bsu15I	ATCGAT	1 cut(s)	465
Bsu36I	CCTNAGG	1 cut(s)	492
BsuRI	GGCC	1 cut(s)	793
BsuTUI	ATCGAT	1 cut(s)	465
BtgZI	GCGATG	1 cut(s)	223
BtsCI	GGATG	2 cut(s)	179, 777
BtsIMutI	CAGTG	1 cut(s)	164
Cac8I	GCNNGC	4 cut(s)	82, 127, 270, 716
Cfr10I	RCCGGY	1 cut(s)	245
Cfr13I	GGNCC	1 cut(s)	281
ClaI	ATCGAT	1 cut(s)	465
CseI	GACGC	1 cut(s)	78
Csp6I	GTAC	2 cut(s)	423, 738
CviAII	CATG	3 cut(s)	427, 531, 789
CviQI	GTAC	2 cut(s)	423, 738
DdeI	CTNAG	1 cut(s)	492
DpnI	GATC	4 cut(s)	28, 252, 341, 612
DpnII	GATC	4 cut(s)	26, 250, 339, 610
DriI	GACNNNNNGTC	1 cut(s)	355
EaeI	YGGCCR	1 cut(s)	791
Eam1104I	CTCTTC	2 cut(s)	258, 666
Eam1105I	GACNNNNNGTC	1 cut(s)	355
EarI	CTCTTC	2 cut(s)	258, 666
EciI	GGCGGA	1 cut(s)	135
Eco130I	CCWWGG	3 cut(s)	517, 741, 794
Eco47I	GGWCC	1 cut(s)	281
Eco57I	CTGAAG	2 cut(s)	54, 690
Eco81I	CCTNAGG	1 cut(s)	492
Eco88I	CYCGRG	1 cut(s)	654
Eco91I	GGTNACC	1 cut(s)	50
EcoO65I	GGTNACC	1 cut(s)	50
EcoRII	CCWGG	3 cut(s)	178, 595, 769
EcoT14I	CCWWGG	3 cut(s)	517, 741, 794
ErhI	CCWWGG	3 cut(s)	517, 741, 794
FaeI	CATG	3 cut(s)	430, 534, 792
FaiI	YATR	9 cut(s)	428, 532, 608, 638, 698, 700, 755, 790, 853
FalI	AAGNNNNNCTT	2 cut(s)	675, 707
FatI	CATG	3 cut(s)	426, 530, 788
FblI	GTMKAC	2 cut(s)	208, 348
Fnu4HI	GCNGC	2 cut(s)	118, 849
FokI	GGATG	2 cut(s)	186, 764
Fsp4HI	GCNGC	2 cut(s)	118, 849
FspBI	CTAG	5 cut(s)	24, 81, 126, 204, 384
GluI	GCNGC	2 cut(s)	118, 849
GsuI	CTGGAG	1 cut(s)	792
HaeIII	GGCC	1 cut(s)	793
HapII	CCGG	1 cut(s)	246
HgaI	GACGC	1 cut(s)	78
Hin1II	CATG	3 cut(s)	430, 534, 792
HincII	GTYRAC	1 cut(s)	508
HindII	GTYRAC	1 cut(s)	508
HindIII	AAGCTT	4 cut(s)	485, 644, 749, 807
HinfI	GANTC	2 cut(s)	392, 785
HpaII	CCGG	1 cut(s)	246
HphI	GGTGA	5 cut(s)	389, 401, 487, 593, 691
Hpy166II	GTNNAC	3 cut(s)	209, 349, 508
Hpy188I	TCNGA	3 cut(s)	141, 304, 334
Hpy188III	TCNNGA	3 cut(s)	279, 491, 722
Hpy8I	GTNNAC	3 cut(s)	209, 349, 508
Hpy99I	CGWCG	2 cut(s)	94, 97
HpyAV	CCTTC	3 cut(s)	108, 230, 516
HpyCH4III	ACNGT	3 cut(s)	56, 737, 840
HpyCH4V	TGCA	1 cut(s)	272
HpyF10VI	GCNNNNNNNGC	3 cut(s)	86, 126, 380
HpyF3I	CTNAG	1 cut(s)	492
Hsp92II	CATG	3 cut(s)	430, 534, 792
Kzo9I	GATC	4 cut(s)	26, 250, 339, 610
LguI	GCTCTTC	1 cut(s)	258
LmnI	GCTCC	2 cut(s)	122, 142
LweI	GCATC	2 cut(s)	281, 786
MaeI	CTAG	5 cut(s)	24, 81, 126, 204, 384
MaeIII	GTNAC	3 cut(s)	50, 454, 649
MalI	GATC	4 cut(s)	28, 252, 341, 612
MboI	GATC	4 cut(s)	26, 250, 339, 610
MboII	GAAGA	6 cut(s)	101, 267, 275, 603, 683, 737
MflI	RGATCY	2 cut(s)	26, 610
MlsI	TGGCCA	1 cut(s)	793
MluCI	AATT	3 cut(s)	323, 478, 600
MluI	ACGCGT	1 cut(s)	87
MluNI	TGGCCA	1 cut(s)	793
MlyI	GAGTC	1 cut(s)	794
MmeI	TCCRAC	1 cut(s)	166
Mox20I	TGGCCA	1 cut(s)	793
MscI	TGGCCA	1 cut(s)	793
MseI	TTAA	3 cut(s)	555, 575, 812
MslI	CAYNNNNRTG	1 cut(s)	631
Msp20I	TGGCCA	1 cut(s)	793
MspI	CCGG	1 cut(s)	246
MspR9I	CCNGG	3 cut(s)	180, 597, 771
MvaI	CCWGG	3 cut(s)	180, 597, 771
MvnI	CGCG	1 cut(s)	89
MwoI	GCNNNNNNNGC	3 cut(s)	86, 126, 380
NdeII	GATC	4 cut(s)	26, 250, 339, 610
NheI	GCTAGC	2 cut(s)	80, 125
NlaIII	CATG	3 cut(s)	430, 534, 792
NlaIV	GGNNCC	1 cut(s)	612
NmeAIII	GCCGAG	1 cut(s)	204
NmuCI	GTSAC	1 cut(s)	649
NspI	RCATGY	1 cut(s)	534
PaeR7I	CTCGAG	1 cut(s)	654
PciI	ACATGT	1 cut(s)	530
PciSI	GCTCTTC	1 cut(s)	258
PcsI	WCGNNNNNNNCGW	2 cut(s)	101, 246
PfeI	GAWTC	1 cut(s)	392
PkrI	GCNGC	2 cut(s)	119, 850
PleI	GAGTC	1 cut(s)	793
PpsI	GAGTC	1 cut(s)	793
PscI	ACATGT	1 cut(s)	530
Psp6I	CCWGG	3 cut(s)	178, 595, 769
PspEI	GGTNACC	1 cut(s)	50
PspGI	CCWGG	3 cut(s)	178, 595, 769
PspN4I	GGNNCC	1 cut(s)	612
PspPI	GGNCC	1 cut(s)	281
PspXI	VCTCGAGB	1 cut(s)	654
PsuI	RGATCY	2 cut(s)	26, 610
RsaI	GTAC	2 cut(s)	424, 739
RsaNI	GTAC	2 cut(s)	423, 738
RseI	CAYNNNNRTG	1 cut(s)	631
SapI	GCTCTTC	1 cut(s)	258
SaqAI	TTAA	3 cut(s)	555, 575, 812
SatI	GCNGC	2 cut(s)	118, 849
Sau3AI	GATC	4 cut(s)	26, 250, 339, 610
Sau96I	GGNCC	1 cut(s)	281
SchI	GAGTC	1 cut(s)	794
ScrFI	CCNGG	3 cut(s)	180, 597, 771
SfaNI	GCATC	2 cut(s)	281, 786
Sfr274I	CTCGAG	1 cut(s)	654
SgrAI	CRCCGGYG	1 cut(s)	245
SinI	GGWCC	1 cut(s)	281
SlaI	CTCGAG	1 cut(s)	654
SmiMI	CAYNNNNRTG	1 cut(s)	631
SmlI	CTYRAG	2 cut(s)	368, 654
SmoI	CTYRAG	2 cut(s)	368, 654
Sse9I	AATT	3 cut(s)	323, 478, 600
SsiI	CCGC	2 cut(s)	117, 120
SspMI	CTAG	5 cut(s)	24, 81, 126, 204, 384
StyD4I	CCNGG	3 cut(s)	178, 595, 769
StyI	CCWWGG	3 cut(s)	517, 741, 794
TaaI	ACNGT	3 cut(s)	56, 737, 840
TaqI	TCGA	2 cut(s)	465, 655
TasI	AATT	3 cut(s)	323, 478, 600
TauI	GCSGC	1 cut(s)	120
TfiI	GAWTC	1 cut(s)	392
Tru1I	TTAA	3 cut(s)	555, 575, 812
Tru9I	TTAA	3 cut(s)	555, 575, 812
TscAI	CASTG	1 cut(s)	164
TseFI	GTSAC	1 cut(s)	649
TseI	GCWGC	1 cut(s)	848
Tsp45I	GTSAC	1 cut(s)	649
TspDTI	ATGAA	1 cut(s)	720
TspGWI	ACGGA	1 cut(s)	248
TspRI	CASTG	1 cut(s)	164
VpaK11BI	GGWCC	1 cut(s)	281
XapI	RAATTY	1 cut(s)	478
XceI	RCATGY	1 cut(s)	534
XhoI	CTCGAG	1 cut(s)	654
XmiI	GTMKAC	2 cut(s)	208, 348
XspI	CTAG	5 cut(s)	24, 81, 126, 204, 384

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.