pycom04g10200

Belongs to the adenylate kinase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
12989875 .. 12991426
1552 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g10200.2

Sequence Viewer

Length: 981 bp
ATGAACCCTAAAAGTTTGGTGTTCCCGTGTCAGGCACGAGGTTGGCATAAAACCAAACACTCTCCAACATCCAACAAACTTCCACTCTCTGCAAACTTCGCGGTTTCAATGGCTGCCCTAACCCGCCTATCAAAACCCTCCTTCTCCTCCGTCTACCGCATAAGCCGGTGCCTGTACTCAGGCGCCGCCCCTGAGACCACCTCTCATGGCGCCTCGCCTTACAGCCGGCGCTTGGGGCCCACGCCCAATCTCGCCGTCAAGGATCCCAAGTACCGCAGCGTGCAGTGGGTCTTCCTGGGCTCGCCGGGCGTCGGAAAAGGCACGTACGCCAGCCGGCTCTCGAATCTCCTCGGCGTTCCTCACATCGCCACCGGAGATCTCGTCCGCGAAGAGCTCGCTTCCTCCGGCCCTCTCTCTCAAGAGTTATCAGAGATCGTGAACCAGGGGAAGTTGGTGTCTGATGAGATCATAATAAACTTGTTGTCGAAGAGATTGGAGGCTGGGGGAGCTAAAGGGGAACTGGGTTTTATTCTCGATGGTTTTCCTCGAACGATTAGACAAGCTGAAATATTGGAAGGGGTGACGGAGGTTGACTTGGTGCTCAATCTGAAGCTCCGGGAAGATGTGCTGCTCGAGAAATGCCTTGGGAGGAGAACTTGTAGTCAGTGCGGTGGAAATTTTAATGTGGCATCCATTAATGTCACGGGCGCAAATGGTCATCCTGCAATTAGCATGGCTCCACTTCTTCCCCCTGCACATTGTATGTCAAAGCTTGTTACTCGAGCAGATGACACTGAAGAAGTGATTAAACATCGGATTCACGTGTACAATGAGAAGAGTCGGCCTGTAGAGGAGTTTTACCGTAGTCGGGGGAAACTGTTGGAGTTTGATTTGCCAGGAGGGATCCAAGAGTCTTGGCCCAAGTTGCTTGAAGTTCTTAATCTCGATGATTACAAGGAGAAGCAGTCTGCTGCTGCTTAA

Protein Analysis

327

Amino Acids

35.59

Weight (kDa)

9.05

Isoelectric Point (pI)

45.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013957)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 168, 182, 209
AccI GTMKAC 1 cut(s) 153
AccII CGCG 2 cut(s) 101, 387
AciI CCGC 7 cut(s) 101, 124, 157, 186, 274, 385, 669
AclWI GGATC 4 cut(s) 257, 270, 898, 911
AcsI RAATTY 1 cut(s) 676
AcuI CTGAAG 2 cut(s) 629, 816
AcvI CACGTG 1 cut(s) 823
AcyI GRCGYC 3 cut(s) 183, 210, 309
AfaI GTAC 4 cut(s) 176, 272, 326, 827
AfiI CCNNNNNNNGG 4 cut(s) 31, 232, 311, 868
AflIII ACRYGT 1 cut(s) 822
AgsI TTSAA 2 cut(s) 108, 932
AjnI CCWGG 3 cut(s) 294, 441, 895
AluBI AGCT 5 cut(s) 394, 509, 563, 613, 772
AluI AGCT 5 cut(s) 394, 509, 563, 613, 772
Alw21I GWGCWC 2 cut(s) 396, 603
Alw26I GTCTC 1 cut(s) 188
AlwI GGATC 4 cut(s) 257, 270, 898, 911
Ama87I CYCGRG 2 cut(s) 632, 780
AoxI GGCC 4 cut(s) 236, 406, 842, 917
ApaI GGGCCC 1 cut(s) 240
ApeKI GCWGC 5 cut(s) 113, 276, 628, 971, 974
ApoI RAATTY 1 cut(s) 676
AseI ATTAAT 1 cut(s) 696
AspLEI GCGC 4 cut(s) 185, 212, 231, 710
AspS9I GGNCC 4 cut(s) 236, 237, 407, 918
AsuC2I CCSGG 2 cut(s) 306, 617
AsuHPI GGTGA 1 cut(s) 592
AvaI CYCGRG 2 cut(s) 632, 780
BaeGI GKGCMC 1 cut(s) 240
BamHI GGATCC 2 cut(s) 262, 903
BanI GGYRCC 3 cut(s) 168, 182, 209
BanII GRGCYC 3 cut(s) 240, 302, 396
BauI CACGAG 1 cut(s) 36
BbrPI CACGTG 1 cut(s) 823
BbsI GAAGAC 1 cut(s) 283
Bbv12I GWGCWC 2 cut(s) 396, 603
BbvI GCAGC 5 cut(s) 100, 288, 615, 958, 961
BccI CCATC 1 cut(s) 530
BceAI ACGGC 1 cut(s) 239
BciT130I CCWGG 3 cut(s) 296, 443, 897
BcnI CCSGG 2 cut(s) 306, 617
BcoDI GTCTC 1 cut(s) 188
BfmI CTRYAG 1 cut(s) 846
BfoI RGCGCY 3 cut(s) 186, 213, 232
BglII AGATCT 1 cut(s) 376
BisI GCNGC 6 cut(s) 114, 186, 277, 629, 972, 975
BlsI GCNGC 6 cut(s) 115, 187, 278, 630, 973, 976
Bme1390I CCNGG 5 cut(s) 296, 306, 443, 617, 897
BmeT110I CYCGRG 2 cut(s) 632, 780
BmgT120I GGNCC 4 cut(s) 236, 237, 407, 918
BmiI GGNNCC 8 cut(s) 170, 184, 211, 237, 238, 264, 738, 905
BmrFI CCNGG 5 cut(s) 296, 306, 443, 617, 897
BmrI ACTGGG 1 cut(s) 530
BmsI GCATC 1 cut(s) 698
BmuI ACTGGG 1 cut(s) 530
BpiI GAAGAC 1 cut(s) 283
BplI GAGNNNNNCTC 2 cut(s) 185, 217
BpuEI CTTGAG 1 cut(s) 402
BpuMI CCSGG 2 cut(s) 306, 617
BsaAI YACGTR 2 cut(s) 324, 823
BsaHI GRCGYC 3 cut(s) 183, 210, 309
BsaI GGTCTC 1 cut(s) 188
BsaJI CCNNGG 4 cut(s) 295, 349, 442, 643
BsaWI WCCGGW 1 cut(s) 371
BsaXI ACNNNNNCTCC 6 cut(s) 366, 396, 643, 673, 950, 980
Bsc4I CCNNNNNNNGG 4 cut(s) 31, 232, 311, 868
Bse118I RCCGGY 3 cut(s) 165, 225, 333
Bse1I ACTGG 1 cut(s) 525
BseBI CCWGG 3 cut(s) 296, 443, 897
BseDI CCNNGG 4 cut(s) 295, 349, 442, 643
BseGI GGATG 3 cut(s) 68, 689, 718
BseLI CCNNNNNNNGG 4 cut(s) 31, 232, 311, 868
BseMII CTCAG 2 cut(s) 183, 192
BseNI ACTGG 1 cut(s) 525
BseRI GAGGAG 4 cut(s) 136, 338, 664, 866
BseSI GKGCMC 1 cut(s) 240
BseXI GCAGC 5 cut(s) 100, 288, 615, 958, 961
BseYI CCCAGC 1 cut(s) 500
BsgI GTGCAG 2 cut(s) 302, 738
Bsh1236I CGCG 2 cut(s) 101, 387
BshFI GGCC 4 cut(s) 238, 408, 844, 919
BshNI GGYRCC 3 cut(s) 168, 182, 209
BsiHKAI GWGCWC 2 cut(s) 396, 603
BsiHKCI CYCGRG 2 cut(s) 632, 780
BsiSI CCGG 7 cut(s) 166, 226, 305, 334, 372, 405, 616
BsiWI CGTACG 1 cut(s) 324
BslI CCNNNNNNNGG 4 cut(s) 31, 232, 311, 868
BsmAI GTCTC 1 cut(s) 188
BsnI GGCC 4 cut(s) 238, 408, 844, 919
Bso31I GGTCTC 1 cut(s) 188
BsoBI CYCGRG 2 cut(s) 632, 780
Bsp120I GGGCCC 1 cut(s) 236
Bsp1286I GDGCHC 4 cut(s) 240, 302, 396, 603
Bsp1407I TGTACA 1 cut(s) 825
Bsp143I GATC 5 cut(s) 262, 376, 432, 465, 903
BspACI CCGC 7 cut(s) 101, 124, 157, 186, 274, 385, 669
BspANI GGCC 4 cut(s) 238, 408, 844, 919
BspCNI CTCAG 2 cut(s) 184, 191
BspFNI CGCG 2 cut(s) 101, 387
BspLI GGNNCC 8 cut(s) 170, 184, 211, 237, 238, 264, 738, 905
BspPI GGATC 4 cut(s) 257, 270, 898, 911
BspQI GCTCTTC 1 cut(s) 384
BspT107I GGYRCC 3 cut(s) 168, 182, 209
BspTNI GGTCTC 1 cut(s) 188
BsrFI RCCGGY 3 cut(s) 165, 225, 333
BsrGI TGTACA 1 cut(s) 825
BsrI ACTGG 1 cut(s) 525
BssAI RCCGGY 3 cut(s) 165, 225, 333
BssECI CCNNGG 4 cut(s) 295, 349, 442, 643
BssMI GATC 5 cut(s) 262, 376, 432, 465, 903
BssNI GRCGYC 3 cut(s) 183, 210, 309
BssSI CACGAG 1 cut(s) 36
BssT1I CCWWGG 1 cut(s) 643
Bst2BI CACGAG 1 cut(s) 36
Bst2UI CCWGG 3 cut(s) 296, 443, 897
Bst4CI ACNGT 2 cut(s) 863, 879
Bst6I CTCTTC 3 cut(s) 384, 482, 830
BstACI GRCGYC 3 cut(s) 183, 210, 309
BstAUI TGTACA 1 cut(s) 825
BstBAI YACGTR 2 cut(s) 324, 823
BstC8I GCNNGC 6 cut(s) 227, 281, 302, 331, 335, 396
BstDEI CTNAG 2 cut(s) 178, 192
BstF5I GGATG 3 cut(s) 68, 689, 718
BstFNI CGCG 2 cut(s) 101, 387
BstH2I RGCGCY 3 cut(s) 186, 213, 232
BstHHI GCGC 4 cut(s) 185, 212, 231, 710
BstKTI GATC 5 cut(s) 265, 379, 435, 468, 906
BstMAI GTCTC 1 cut(s) 188
BstMBI GATC 5 cut(s) 262, 376, 432, 465, 903
BstMWI GCNNNNNNNGC 5 cut(s) 98, 235, 306, 506, 925
BstNI CCWGG 3 cut(s) 296, 443, 897
BstSCI CCNGG 5 cut(s) 294, 304, 441, 615, 895
BstSFI CTRYAG 1 cut(s) 846
BstSLI GKGCMC 1 cut(s) 240
BstUI CGCG 2 cut(s) 101, 387
BstV1I GCAGC 5 cut(s) 100, 288, 615, 958, 961
BstV2I GAAGAC 1 cut(s) 283
BstX2I RGATCY 3 cut(s) 262, 376, 903
BstYI RGATCY 3 cut(s) 262, 376, 903
BsuRI GGCC 4 cut(s) 238, 408, 844, 919
BtgZI GCGATG 1 cut(s) 349
BtsCI GGATG 3 cut(s) 68, 689, 718
BtsI GCAGTG 1 cut(s) 290
BtsIMutI CAGTG 3 cut(s) 290, 671, 792
Cac8I GCNNGC 6 cut(s) 227, 281, 302, 331, 335, 396
CfoI GCGC 4 cut(s) 185, 212, 231, 710
Cfr10I RCCGGY 3 cut(s) 165, 225, 333
Cfr13I GGNCC 4 cut(s) 236, 237, 407, 918
CseI GACGC 1 cut(s) 298
Csp6I GTAC 4 cut(s) 175, 271, 325, 826
CviAII CATG 2 cut(s) 206, 733
CviQI GTAC 4 cut(s) 175, 271, 325, 826
DdeI CTNAG 2 cut(s) 178, 192
DinI GGCGCC 2 cut(s) 184, 211
DpnI GATC 5 cut(s) 264, 378, 434, 467, 905
DpnII GATC 5 cut(s) 262, 376, 432, 465, 903
Eam1104I CTCTTC 3 cut(s) 384, 482, 830
EarI CTCTTC 3 cut(s) 384, 482, 830
Ecl136II GAGCTC 1 cut(s) 394
Eco130I CCWWGG 1 cut(s) 643
Eco24I GRGCYC 3 cut(s) 240, 302, 396
Eco31I GGTCTC 1 cut(s) 188
Eco53kI GAGCTC 1 cut(s) 394
Eco57I CTGAAG 2 cut(s) 629, 816
Eco72I CACGTG 1 cut(s) 823
Eco88I CYCGRG 2 cut(s) 632, 780
EcoICRI GAGCTC 1 cut(s) 394
EcoO109I RGGNCCY 1 cut(s) 236
EcoRII CCWGG 3 cut(s) 294, 441, 895
EcoT14I CCWWGG 1 cut(s) 643
EcoT38I GRGCYC 3 cut(s) 240, 302, 396
EgeI GGCGCC 2 cut(s) 184, 211
EheI GGCGCC 2 cut(s) 184, 211
ErhI CCWWGG 1 cut(s) 643
FaeI CATG 2 cut(s) 209, 736
FaiI YATR 6 cut(s) 48, 161, 207, 470, 734, 764
FatI CATG 2 cut(s) 205, 732
FauI CCCGC 1 cut(s) 131
FblI GTMKAC 1 cut(s) 153
Fnu4HI GCNGC 6 cut(s) 114, 186, 277, 629, 972, 975
FokI GGATG 3 cut(s) 55, 676, 705
FriOI GRGCYC 3 cut(s) 240, 302, 396
Fsp4HI GCNGC 6 cut(s) 114, 186, 277, 629, 972, 975
GlaI GCGC 4 cut(s) 184, 211, 230, 709
GluI GCNGC 6 cut(s) 114, 186, 277, 629, 972, 975
GsaI CCCAGC 1 cut(s) 504
HaeII RGCGCY 3 cut(s) 186, 213, 232
HaeIII GGCC 4 cut(s) 238, 408, 844, 919
HapII CCGG 7 cut(s) 166, 226, 305, 334, 372, 405, 616
HgaI GACGC 1 cut(s) 298
HhaI GCGC 4 cut(s) 185, 212, 231, 710
Hin1I GRCGYC 3 cut(s) 183, 210, 309
Hin1II CATG 2 cut(s) 209, 736
Hin6I GCGC 4 cut(s) 183, 210, 229, 708
HinP1I GCGC 4 cut(s) 183, 210, 229, 708
HincII GTYRAC 1 cut(s) 592
HindII GTYRAC 1 cut(s) 592
HindIII AAGCTT 1 cut(s) 770
HinfI GANTC 4 cut(s) 343, 817, 838, 911
HpaII CCGG 7 cut(s) 166, 226, 305, 334, 372, 405, 616
HphI GGTGA 1 cut(s) 592
Hpy166II GTNNAC 4 cut(s) 154, 439, 592, 826
Hpy188I TCNGA 5 cut(s) 314, 430, 460, 609, 816
Hpy188III TCNNGA 6 cut(s) 340, 419, 436, 533, 634, 944
Hpy8I GTNNAC 4 cut(s) 154, 439, 592, 826
Hpy99I CGWCG 1 cut(s) 314
HpyAV CCTTC 2 cut(s) 151, 569
HpyCH4III ACNGT 2 cut(s) 863, 879
HpyCH4IV ACGT 2 cut(s) 323, 822
HpyCH4V TGCA 4 cut(s) 92, 283, 725, 755
HpyF10VI GCNNNNNNNGC 5 cut(s) 98, 235, 306, 506, 925
HpyF3I CTNAG 2 cut(s) 178, 192
HpySE526I ACGT 2 cut(s) 323, 822
Hsp92I GRCGYC 3 cut(s) 183, 210, 309
Hsp92II CATG 2 cut(s) 209, 736
HspAI GCGC 4 cut(s) 183, 210, 229, 708
KasI GGCGCC 2 cut(s) 182, 209
KroI GCCGGC 2 cut(s) 225, 333
KroNI GCCGGC 2 cut(s) 227, 335
Kzo9I GATC 5 cut(s) 262, 376, 432, 465, 903
LguI GCTCTTC 1 cut(s) 384
LmnI GCTCC 3 cut(s) 506, 618, 742
Lsp1109I GCAGC 5 cut(s) 100, 288, 615, 958, 961
LweI GCATC 1 cut(s) 698
MaeII ACGT 2 cut(s) 323, 822
MaeIII GTNAC 3 cut(s) 580, 700, 775
MalI GATC 5 cut(s) 264, 378, 434, 467, 905
MboI GATC 5 cut(s) 262, 376, 432, 465, 903
MboII GAAGA 7 cut(s) 283, 401, 499, 632, 737, 809, 847
MflI RGATCY 3 cut(s) 262, 376, 903
MhlI GDGCHC 4 cut(s) 240, 302, 396, 603
MluCI AATT 2 cut(s) 676, 726
Mly113I GGCGCC 2 cut(s) 183, 210
MlyI GAGTC 2 cut(s) 847, 920
MmeI TCCRAC 4 cut(s) 89, 96, 292, 861
MroNI GCCGGC 2 cut(s) 225, 333
MseI TTAA 5 cut(s) 681, 696, 807, 939, 979
MspI CCGG 7 cut(s) 166, 226, 305, 334, 372, 405, 616
MspR9I CCNGG 5 cut(s) 296, 306, 443, 617, 897
MvaI CCWGG 3 cut(s) 296, 443, 897
MvnI CGCG 2 cut(s) 101, 387
MwoI GCNNNNNNNGC 5 cut(s) 98, 235, 306, 506, 925
NaeI GCCGGC 2 cut(s) 227, 335
NarI GGCGCC 2 cut(s) 183, 210
NciI CCSGG 2 cut(s) 306, 617
NdeII GATC 5 cut(s) 262, 376, 432, 465, 903
NgoMIV GCCGGC 2 cut(s) 225, 333
NlaIII CATG 2 cut(s) 209, 736
NlaIV GGNNCC 8 cut(s) 170, 184, 211, 237, 238, 264, 738, 905
NmeAIII GCCGAG 1 cut(s) 330
NmuCI GTSAC 2 cut(s) 580, 700
PaeR7I CTCGAG 2 cut(s) 632, 780
PciSI GCTCTTC 1 cut(s) 384
PdiI GCCGGC 2 cut(s) 227, 335
PfeI GAWTC 2 cut(s) 343, 817
Pfl23II CGTACG 1 cut(s) 324
PfoI TCCNGGA 1 cut(s) 615
PkrI GCNGC 6 cut(s) 115, 187, 278, 630, 973, 976
PleI GAGTC 2 cut(s) 846, 919
PluTI GGCGCC 2 cut(s) 186, 213
PmaCI CACGTG 1 cut(s) 823
PmlI CACGTG 1 cut(s) 823
PpsI GAGTC 2 cut(s) 846, 919
Ppu21I YACGTR 2 cut(s) 324, 823
PshBI ATTAAT 1 cut(s) 696
Psp124BI GAGCTC 1 cut(s) 396
Psp6I CCWGG 3 cut(s) 294, 441, 895
PspCI CACGTG 1 cut(s) 823
PspFI CCCAGC 1 cut(s) 500
PspGI CCWGG 3 cut(s) 294, 441, 895
PspLI CGTACG 1 cut(s) 324
PspN4I GGNNCC 8 cut(s) 170, 184, 211, 237, 238, 264, 738, 905
PspOMI GGGCCC 1 cut(s) 236
PspPI GGNCC 4 cut(s) 236, 237, 407, 918
PspXI VCTCGAGB 1 cut(s) 780
PsuI RGATCY 3 cut(s) 262, 376, 903
RsaI GTAC 4 cut(s) 176, 272, 326, 827
RsaNI GTAC 4 cut(s) 175, 271, 325, 826
SacI GAGCTC 1 cut(s) 396
SapI GCTCTTC 1 cut(s) 384
SaqAI TTAA 5 cut(s) 681, 696, 807, 939, 979
SatI GCNGC 6 cut(s) 114, 186, 277, 629, 972, 975
Sau3AI GATC 5 cut(s) 262, 376, 432, 465, 903
Sau96I GGNCC 4 cut(s) 236, 237, 407, 918
SchI GAGTC 2 cut(s) 847, 920
ScrFI CCNGG 5 cut(s) 296, 306, 443, 617, 897
SduI GDGCHC 4 cut(s) 240, 302, 396, 603
SfaNI GCATC 1 cut(s) 698
SfcI CTRYAG 1 cut(s) 846
SfoI GGCGCC 2 cut(s) 184, 211
Sfr274I CTCGAG 2 cut(s) 632, 780
SlaI CTCGAG 2 cut(s) 632, 780
SmlI CTYRAG 3 cut(s) 417, 632, 780
SmoI CTYRAG 3 cut(s) 417, 632, 780
Sse9I AATT 2 cut(s) 676, 726
SsiI CCGC 7 cut(s) 101, 124, 157, 186, 274, 385, 669
SspDI GGCGCC 2 cut(s) 182, 209
SspI AATATT 1 cut(s) 570
SstI GAGCTC 1 cut(s) 396
StyD4I CCNGG 5 cut(s) 294, 304, 441, 615, 895
StyI CCWWGG 1 cut(s) 643
TaaI ACNGT 2 cut(s) 863, 879
TaiI ACGT 2 cut(s) 326, 825
TaqI TCGA 7 cut(s) 341, 485, 534, 547, 633, 781, 945
TasI AATT 2 cut(s) 676, 726
TatI WGTACW 2 cut(s) 174, 825
TauI GCSGC 1 cut(s) 188
TfiI GAWTC 2 cut(s) 343, 817
Tru1I TTAA 5 cut(s) 681, 696, 807, 939, 979
Tru9I TTAA 5 cut(s) 681, 696, 807, 939, 979
TscAI CASTG 3 cut(s) 290, 671, 799
TseFI GTSAC 2 cut(s) 580, 700
TseI GCWGC 5 cut(s) 113, 276, 628, 971, 974
Tsp45I GTSAC 2 cut(s) 580, 700
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 2 cut(s) 139, 599
TspRI CASTG 3 cut(s) 290, 671, 799
VspI ATTAAT 1 cut(s) 696
XapI RAATTY 1 cut(s) 676
XhoI CTCGAG 2 cut(s) 632, 780
XmiI GTMKAC 1 cut(s) 153
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.