Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0013957

Physical Location & Seq

Genomic Coordinates Forward (+)

24177908 .. 24181014

Gene Structure 3107 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G244100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 882 bp

ATGGCGGCCTTAACCCGCCTATCAAAGCCCTCGTTCACATCACTTTCCTCCGTCTCACGCATAAGCCGGTGCTTGTACTCGGGCATAGCACCGGAGCCCAGCTCTCATGGCGCTTCGCCATATAGCCCACGATTGGGGCCCAAGCCCAACCTCTCGGTCAAGGACCCCAAGGATCGAAACATACAGTGGGTCTTCTTGGGCTCACCGGGCGTGGGCAAAGGCACGTACGCCAGCCGCCTGTCTAATCTCCTCGGCGTTCCTCACATCGCCACTGGAGATCTCGTCCGCGAAGAGCTCGCAGCCTCTGGGCCTCTCTCTAAAGAGTTATCGGAGATTGTGAACCAGGGGAAGTTGGTTTCTGATGAGATTATAATAAGCTTGTTGTCGAAGAGATTGGAGGCTGGGGGAGCTAAAGGGGAACTGGGTTTTATTCTTGATGGGTTTCCTCGAACCATAAGACAAGCGGAAATATTGGAAGGGGTTACAGAGATTGACCTGGTGCTCAATCTGAAGCTCCGGGAAGATGTGTTGGTTGAGAAATGCCTTGGGAGGAGAATGTGTAGTCAGTGTGGGGGAAATTTCAATGTGGCCTCCATTAATGTTAAGGACTCGAATGGGAGTCCTGCAATTAGCATGGCTCCGCTTCTTCCACCTCCACATTGTATGTCAAAGCTTGTTACTCGAGCCGATGATACTGAAGAAGTAGTTAAACATCGGATTCATGTATACAATGAGAAGAGTCGGCCTGTAGAAGAATTCTACCGTAGTCGAGGAAAACTGTTGGAGTTTGATTTGCCAGGAGGGATCCCAGAGTCTTGGCCAAAGTTGCTTGAAGTTCTTAATCTTGATGAATACAAGGAGAAGCAGTCTGCTGCAGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004017 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006082 GO:0006139 GO:0006520 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009117 GO:0009123 GO:0009165 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016053 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016776 GO:0018130 GO:0019205 GO:0019438 GO:0019637 GO:0019752 GO:0022622 GO:0032501 GO:0032502 GO:0034641 GO:0034654 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046483 GO:0046940 GO:0048364 GO:0048367 GO:0048731 GO:0048856 GO:0050145 GO:0055086 GO:0071704 GO:0090407 GO:0099402 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00230 ko00730 ko01100 ko01110 ko01130 map00230 map00730 map01100 map01110 map01130

Pfam Domains

Protein Families

ADK

Protein Analysis

294

Amino Acids

31.88

Weight (kDa)

8.21

Isoelectric Point (pI)

50.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013957)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37250
fragaria_vesca	FvH4_6g15070
malus_domestica	MD04G1113300.v1.1
prunus_persica	Prupe.6G244100_v2.0.a1 Prupe.6G244100_v2.0.a1
pyrus_communis	pycom04g10200 pycom12g12510
rosa_chinensis	RchiOBHm_Chr3g0468251
rosa_laevigata	RLG00000024438
rosa_multiflora	Rmu_sc0004524.1_g000001 Rmu_sc0005436.1_g000003
rosa_roxburghii	Rroxscaffold_6G00412860
rosa_rugosa	Rorug03G0094700
rosa_samantha	Rh3AG142200 Rh3BG163800 Rh3DG164400
rosa_wichuraiana	Rw3G013460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	371
AccI	GTMKAC	1 cut(s)	726
AccII	CGCG	1 cut(s)	288
AciI	CCGC	6 cut(s)	5, 16, 235, 286, 464, 641
AclWI	GGATC	3 cut(s)	180, 799, 812
AcoI	YGGCCR	1 cut(s)	818
AcsI	RAATTY	2 cut(s)	577, 755
AcuI	CTGAAG	2 cut(s)	530, 717
AfaI	GTAC	2 cut(s)	77, 227
AfiI	CCNNNNNNNGG	3 cut(s)	133, 134, 212
AgsI	TTSAA	2 cut(s)	583, 833
AjnI	CCWGG	3 cut(s)	342, 495, 796
AluBI	AGCT	6 cut(s)	102, 295, 378, 410, 514, 673
AluI	AGCT	6 cut(s)	102, 295, 378, 410, 514, 673
Alw21I	GWGCWC	2 cut(s)	297, 504
Alw26I	GTCTC	1 cut(s)	58
AlwI	GGATC	3 cut(s)	180, 799, 812
AlwNI	CAGNNNCTG	1 cut(s)	305
Ama87I	CYCGRG	2 cut(s)	79, 681
AoxI	GGCC	6 cut(s)	6, 137, 308, 588, 743, 818
ApaI	GGGCCC	1 cut(s)	141
ApeKI	GCWGC	3 cut(s)	299, 872, 875
ApoI	RAATTY	2 cut(s)	577, 755
AseI	ATTAAT	1 cut(s)	597
AspLEI	GCGC	1 cut(s)	113
AspS9I	GGNCC	4 cut(s)	137, 138, 163, 308
AsuC2I	CCSGG	2 cut(s)	207, 518
AsuHPI	GGTGA	1 cut(s)	195
AvaI	CYCGRG	2 cut(s)	79, 681
AvaII	GGWCC	1 cut(s)	163
BaeGI	GKGCMC	1 cut(s)	141
BalI	TGGCCA	1 cut(s)	820
BamHI	GGATCC	1 cut(s)	804
BanII	GRGCYC	4 cut(s)	99, 141, 203, 297
BbsI	GAAGAC	1 cut(s)	184
Bbv12I	GWGCWC	2 cut(s)	297, 504
BbvI	GCAGC	2 cut(s)	311, 859
BccI	CCATC	1 cut(s)	431
BciT130I	CCWGG	3 cut(s)	344, 497, 798
BcnI	CCSGG	2 cut(s)	207, 518
BcoDI	GTCTC	1 cut(s)	58
BfmI	CTRYAG	2 cut(s)	747, 873
BfoI	RGCGCY	1 cut(s)	114
BglII	AGATCT	1 cut(s)	277
BisI	GCNGC	5 cut(s)	6, 235, 300, 873, 876
BlsI	GCNGC	5 cut(s)	7, 236, 301, 874, 877
Bme1390I	CCNGG	5 cut(s)	207, 344, 497, 518, 798
Bme18I	GGWCC	1 cut(s)	163
BmeT110I	CYCGRG	2 cut(s)	79, 681
BmgT120I	GGNCC	4 cut(s)	137, 138, 163, 308
BmiI	GGNNCC	6 cut(s)	96, 138, 139, 165, 639, 806
BmrFI	CCNGG	5 cut(s)	207, 344, 497, 518, 798
BmrI	ACTGGG	1 cut(s)	431
BmuI	ACTGGG	1 cut(s)	431
BpiI	GAAGAC	1 cut(s)	184
BplI	GAGNNNNNCTC	2 cut(s)	86, 118
BpmI	CTGGAG	1 cut(s)	294
BpuMI	CCSGG	2 cut(s)	207, 518
BsaAI	YACGTR	1 cut(s)	225
BsaJI	CCNNGG	4 cut(s)	168, 250, 343, 544
BsaWI	WCCGGW	1 cut(s)	91
BsaXI	ACNNNNNCTCC	6 cut(s)	267, 297, 544, 574, 851, 881
Bsc4I	CCNNNNNNNGG	3 cut(s)	133, 134, 212
Bse118I	RCCGGY	1 cut(s)	66
Bse1I	ACTGG	2 cut(s)	277, 426
BseBI	CCWGG	3 cut(s)	344, 497, 798
BseDI	CCNNGG	4 cut(s)	168, 250, 343, 544
BseLI	CCNNNNNNNGG	3 cut(s)	133, 134, 212
BseNI	ACTGG	2 cut(s)	277, 426
BseRI	GAGGAG	2 cut(s)	239, 565
BseSI	GKGCMC	1 cut(s)	141
BseXI	GCAGC	2 cut(s)	311, 859
BseYI	CCCAGC	2 cut(s)	98, 401
Bsh1236I	CGCG	1 cut(s)	288
BshFI	GGCC	6 cut(s)	8, 139, 310, 590, 745, 820
BsiHKAI	GWGCWC	2 cut(s)	297, 504
BsiHKCI	CYCGRG	2 cut(s)	79, 681
BsiSI	CCGG	4 cut(s)	67, 92, 206, 517
BsiWI	CGTACG	1 cut(s)	225
BslI	CCNNNNNNNGG	3 cut(s)	133, 134, 212
BsmAI	GTCTC	1 cut(s)	58
BsmBI	CGTCTC	1 cut(s)	58
BsnI	GGCC	6 cut(s)	8, 139, 310, 590, 745, 820
BsoBI	CYCGRG	2 cut(s)	79, 681
Bsp120I	GGGCCC	1 cut(s)	137
Bsp1286I	GDGCHC	5 cut(s)	99, 141, 203, 297, 504
Bsp143I	GATC	3 cut(s)	172, 277, 804
BspACI	CCGC	6 cut(s)	5, 16, 235, 286, 464, 641
BspANI	GGCC	6 cut(s)	8, 139, 310, 590, 745, 820
BspFNI	CGCG	1 cut(s)	288
BspLI	GGNNCC	6 cut(s)	96, 138, 139, 165, 639, 806
BspMAI	CTGCAG	1 cut(s)	877
BspPI	GGATC	3 cut(s)	180, 799, 812
BspQI	GCTCTTC	1 cut(s)	285
BsrFI	RCCGGY	1 cut(s)	66
BsrI	ACTGG	2 cut(s)	277, 426
BssAI	RCCGGY	1 cut(s)	66
BssECI	CCNNGG	4 cut(s)	168, 250, 343, 544
BssMI	GATC	3 cut(s)	172, 277, 804
BssNAI	GTATAC	1 cut(s)	727
BssT1I	CCWWGG	2 cut(s)	168, 544
Bst1107I	GTATAC	1 cut(s)	727
Bst2UI	CCWGG	3 cut(s)	344, 497, 798
Bst4CI	ACNGT	3 cut(s)	186, 764, 780
Bst6I	CTCTTC	3 cut(s)	285, 383, 731
BstBAI	YACGTR	1 cut(s)	225
BstC8I	GCNNGC	2 cut(s)	232, 297
BstFNI	CGCG	1 cut(s)	288
BstH2I	RGCGCY	1 cut(s)	114
BstHHI	GCGC	1 cut(s)	113
BstKTI	GATC	3 cut(s)	175, 280, 807
BstMAI	GTCTC	1 cut(s)	58
BstMBI	GATC	3 cut(s)	172, 277, 804
BstMWI	GCNNNNNNNGC	4 cut(s)	108, 207, 407, 826
BstNI	CCWGG	3 cut(s)	344, 497, 798
BstSCI	CCNGG	5 cut(s)	205, 342, 495, 516, 796
BstSFI	CTRYAG	2 cut(s)	747, 873
BstSLI	GKGCMC	1 cut(s)	141
BstUI	CGCG	1 cut(s)	288
BstV1I	GCAGC	2 cut(s)	311, 859
BstV2I	GAAGAC	1 cut(s)	184
BstX2I	RGATCY	2 cut(s)	277, 804
BstXI	CCANNNNNNTGG	1 cut(s)	816
BstYI	RGATCY	2 cut(s)	277, 804
BstZ17I	GTATAC	1 cut(s)	727
BsuRI	GGCC	6 cut(s)	8, 139, 310, 590, 745, 820
BtgZI	GCGATG	1 cut(s)	250
BtsIMutI	CAGTG	3 cut(s)	191, 270, 572
Cac8I	GCNNGC	2 cut(s)	232, 297
CaiI	CAGNNNCTG	1 cut(s)	305
CfoI	GCGC	1 cut(s)	113
Cfr10I	RCCGGY	1 cut(s)	66
Cfr13I	GGNCC	4 cut(s)	137, 138, 163, 308
CsiI	ACCWGGT	1 cut(s)	495
Csp6I	GTAC	2 cut(s)	76, 226
CviAII	CATG	4 cut(s)	107, 634, 722, 879
CviQI	GTAC	2 cut(s)	76, 226
DpnI	GATC	3 cut(s)	174, 279, 806
DpnII	GATC	3 cut(s)	172, 277, 804
EaeI	YGGCCR	1 cut(s)	818
Eam1104I	CTCTTC	3 cut(s)	285, 383, 731
EarI	CTCTTC	3 cut(s)	285, 383, 731
Ecl136II	GAGCTC	1 cut(s)	295
Eco130I	CCWWGG	2 cut(s)	168, 544
Eco24I	GRGCYC	4 cut(s)	99, 141, 203, 297
Eco47I	GGWCC	1 cut(s)	163
Eco53kI	GAGCTC	1 cut(s)	295
Eco57I	CTGAAG	2 cut(s)	530, 717
Eco88I	CYCGRG	2 cut(s)	79, 681
EcoICRI	GAGCTC	1 cut(s)	295
EcoO109I	RGGNCCY	2 cut(s)	137, 163
EcoRI	GAATTC	1 cut(s)	755
EcoRII	CCWGG	3 cut(s)	342, 495, 796
EcoT14I	CCWWGG	2 cut(s)	168, 544
EcoT38I	GRGCYC	4 cut(s)	99, 141, 203, 297
ErhI	CCWWGG	2 cut(s)	168, 544
Esp3I	CGTCTC	1 cut(s)	58
FaeI	CATG	4 cut(s)	110, 637, 725, 882
FatI	CATG	4 cut(s)	106, 633, 721, 878
FauI	CCCGC	1 cut(s)	23
FblI	GTMKAC	1 cut(s)	726
Fnu4HI	GCNGC	5 cut(s)	6, 235, 300, 873, 876
FriOI	GRGCYC	4 cut(s)	99, 141, 203, 297
Fsp4HI	GCNGC	5 cut(s)	6, 235, 300, 873, 876
GlaI	GCGC	1 cut(s)	112
GluI	GCNGC	5 cut(s)	6, 235, 300, 873, 876
GsaI	CCCAGC	2 cut(s)	102, 405
GsuI	CTGGAG	1 cut(s)	294
HaeII	RGCGCY	1 cut(s)	114
HaeIII	GGCC	6 cut(s)	8, 139, 310, 590, 745, 820
HapII	CCGG	4 cut(s)	67, 92, 206, 517
HhaI	GCGC	1 cut(s)	113
Hin1II	CATG	4 cut(s)	110, 637, 725, 882
Hin6I	GCGC	1 cut(s)	111
HinP1I	GCGC	1 cut(s)	111
HindIII	AAGCTT	2 cut(s)	376, 671
HinfI	GANTC	5 cut(s)	608, 619, 718, 739, 812
HpaII	CCGG	4 cut(s)	67, 92, 206, 517
HphI	GGTGA	1 cut(s)	195
Hpy166II	GTNNAC	3 cut(s)	36, 340, 727
Hpy188I	TCNGA	4 cut(s)	331, 361, 510, 717
Hpy188III	TCNNGA	2 cut(s)	434, 845
Hpy8I	GTNNAC	3 cut(s)	36, 340, 727
HpyAV	CCTTC	1 cut(s)	470
HpyCH4III	ACNGT	3 cut(s)	186, 764, 780
HpyCH4IV	ACGT	1 cut(s)	224
HpyCH4V	TGCA	2 cut(s)	626, 875
HpyF10VI	GCNNNNNNNGC	4 cut(s)	108, 207, 407, 826
HpySE526I	ACGT	1 cut(s)	224
Hsp92II	CATG	4 cut(s)	110, 637, 725, 882
HspAI	GCGC	1 cut(s)	111
Kzo9I	GATC	3 cut(s)	172, 277, 804
LguI	GCTCTTC	1 cut(s)	285
LmnI	GCTCC	4 cut(s)	94, 407, 519, 643
Lsp1109I	GCAGC	2 cut(s)	311, 859
MabI	ACCWGGT	1 cut(s)	495
MaeII	ACGT	1 cut(s)	224
MaeIII	GTNAC	2 cut(s)	481, 676
MalI	GATC	3 cut(s)	174, 279, 806
MboI	GATC	3 cut(s)	172, 277, 804
MboII	GAAGA	8 cut(s)	184, 302, 400, 533, 638, 710, 748, 764
MflI	RGATCY	2 cut(s)	277, 804
MhlI	GDGCHC	5 cut(s)	99, 141, 203, 297, 504
MlsI	TGGCCA	1 cut(s)	820
MluCI	AATT	3 cut(s)	577, 627, 755
MluNI	TGGCCA	1 cut(s)	820
MlyI	GAGTC	4 cut(s)	602, 628, 748, 821
MmeI	TCCRAC	1 cut(s)	762
Mox20I	TGGCCA	1 cut(s)	820
MscI	TGGCCA	1 cut(s)	820
MseI	TTAA	5 cut(s)	11, 597, 603, 708, 840
Msp20I	TGGCCA	1 cut(s)	820
MspI	CCGG	4 cut(s)	67, 92, 206, 517
MspR9I	CCNGG	5 cut(s)	207, 344, 497, 518, 798
MvaI	CCWGG	3 cut(s)	344, 497, 798
MvnI	CGCG	1 cut(s)	288
MwoI	GCNNNNNNNGC	4 cut(s)	108, 207, 407, 826
NciI	CCSGG	2 cut(s)	207, 518
NdeII	GATC	3 cut(s)	172, 277, 804
NlaIII	CATG	4 cut(s)	110, 637, 725, 882
NlaIV	GGNNCC	6 cut(s)	96, 138, 139, 165, 639, 806
NmeAIII	GCCGAG	1 cut(s)	231
PaeR7I	CTCGAG	1 cut(s)	681
PciSI	GCTCTTC	1 cut(s)	285
PfeI	GAWTC	1 cut(s)	718
Pfl23II	CGTACG	1 cut(s)	225
PfoI	TCCNGGA	1 cut(s)	516
PkrI	GCNGC	5 cut(s)	7, 236, 301, 874, 877
PleI	GAGTC	4 cut(s)	602, 627, 747, 820
PpsI	GAGTC	4 cut(s)	602, 627, 747, 820
Ppu21I	YACGTR	1 cut(s)	225
PpuMI	RGGWCCY	1 cut(s)	163
PshBI	ATTAAT	1 cut(s)	597
PsiI	TTATAA	1 cut(s)	371
Psp124BI	GAGCTC	1 cut(s)	297
Psp5II	RGGWCCY	1 cut(s)	163
Psp6I	CCWGG	3 cut(s)	342, 495, 796
PspFI	CCCAGC	2 cut(s)	98, 401
PspGI	CCWGG	3 cut(s)	342, 495, 796
PspLI	CGTACG	1 cut(s)	225
PspN4I	GGNNCC	6 cut(s)	96, 138, 139, 165, 639, 806
PspOMI	GGGCCC	1 cut(s)	137
PspPI	GGNCC	4 cut(s)	137, 138, 163, 308
PspPPI	RGGWCCY	1 cut(s)	163
PspXI	VCTCGAGB	1 cut(s)	681
PstI	CTGCAG	1 cut(s)	877
PstNI	CAGNNNCTG	1 cut(s)	305
PsuI	RGATCY	2 cut(s)	277, 804
RsaI	GTAC	2 cut(s)	77, 227
RsaNI	GTAC	2 cut(s)	76, 226
SacI	GAGCTC	1 cut(s)	297
SapI	GCTCTTC	1 cut(s)	285
SaqAI	TTAA	5 cut(s)	11, 597, 603, 708, 840
SatI	GCNGC	5 cut(s)	6, 235, 300, 873, 876
Sau3AI	GATC	3 cut(s)	172, 277, 804
Sau96I	GGNCC	4 cut(s)	137, 138, 163, 308
SchI	GAGTC	4 cut(s)	602, 628, 748, 821
ScrFI	CCNGG	5 cut(s)	207, 344, 497, 518, 798
SduI	GDGCHC	5 cut(s)	99, 141, 203, 297, 504
SexAI	ACCWGGT	1 cut(s)	495
SfcI	CTRYAG	2 cut(s)	747, 873
Sfr274I	CTCGAG	1 cut(s)	681
SinI	GGWCC	1 cut(s)	163
SlaI	CTCGAG	1 cut(s)	681
SmlI	CTYRAG	1 cut(s)	681
SmoI	CTYRAG	1 cut(s)	681
Sse9I	AATT	3 cut(s)	577, 627, 755
SsiI	CCGC	6 cut(s)	5, 16, 235, 286, 464, 641
SspI	AATATT	1 cut(s)	471
SstI	GAGCTC	1 cut(s)	297
StyD4I	CCNGG	5 cut(s)	205, 342, 495, 516, 796
StyI	CCWWGG	2 cut(s)	168, 544
TaaI	ACNGT	3 cut(s)	186, 764, 780
TaiI	ACGT	1 cut(s)	227
TaqI	TCGA	6 cut(s)	175, 386, 448, 611, 682, 769
TaqII	GACCGA	1 cut(s)	145
TasI	AATT	3 cut(s)	577, 627, 755
TatI	WGTACW	1 cut(s)	75
TauI	GCSGC	2 cut(s)	8, 237
TfiI	GAWTC	1 cut(s)	718
Tru1I	TTAA	5 cut(s)	11, 597, 603, 708, 840
Tru9I	TTAA	5 cut(s)	11, 597, 603, 708, 840
TscAI	CASTG	3 cut(s)	191, 277, 572
TseI	GCWGC	3 cut(s)	299, 872, 875
TspDTI	ATGAA	2 cut(s)	710, 864
TspGWI	ACGGA	1 cut(s)	40
TspRI	CASTG	3 cut(s)	191, 277, 572
VpaK11BI	GGWCC	1 cut(s)	163
VspI	ATTAAT	1 cut(s)	597
XapI	RAATTY	2 cut(s)	577, 755
XhoI	CTCGAG	1 cut(s)	681
XmiI	GTMKAC	1 cut(s)	726

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.