AT2G38970

Zinc finger (C3HC4-type RING finger) family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0012886
Physical Location & Seq
Forward (+)
16273897 .. 16276872
2976 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G38970.1

Sequence Viewer

Length: 2079 bp
ATGGGAACTAGATGGAGGAGAATGAAACTAGCTTTGGGTCTAAATCTCTGCACGTACCTCCCAAGAACTCTAGAGGAATCACCCACTCCTTTGAATTCTACAGAGAGACTATCCGATGTTGCTCTGCTTTCTCCACTTAACTGGCCTATGACTCCGACACCTTCCTCTCACGGTCTGAAATTGTCCAGAAACAGCTCTAAATCTTCAAAGACATGTTCTATATGCTTAAATAAGATGAAAGAAGGAGGAGGACATGCTCTTTTCACAGCAGAGTGCTCGCATTCGTTTCATTTTCACTGCATTGCTTCGAATGTGAAACATGGAAACCAAGTTTGCCCGGTGTGCCGTGCAAAATGGAAGGAAATCCCAATGCAGCACCCAAGTTTTGATCTTCCTTATCTCTTTGCTCGGTCTTATAACAATGATGCAGCTATTAGCCTTGTCCACCGCTTACCTAGATCTCGTGGAGTTATGAATCAAGGACGAGGTCTGGCTCCTGAGCCGTCTATGTTTGATGATGATGAACGGTTAGAGCAGCAACTCGTGTTTTCTGGGAAGAGCTATAGTGATGCTTTGGAGAACAATCATCCTGTAAGAATGATGGACTTGAAGATATATCCTGAGGTTTCCGCTGTACCACGAGCTGACTCCCGTGAGAAGTTTGATGTATTGGTGCATCTTAGAGCTGCTGCCATGGTTACTGGAAATGCTAACTCTCTCAACAATCAGATATCTAGGTATCCTCGAGCTCCAGTTGATCTTGTCACGGTGCTTGACATCAGTGGGAGCATGGCTGGAACTAAACTGGCTCTACTCAAACGAGCAATGGGTTTTGTGATTCAGAACCTTGGTTCAAATGATAGGCTCTCGGTTATTGCTTTCTCTTCTACTGCTCGTCGTCTTTTCCCTTTGACTAAGATGTCTGATGCTGGTAGGCAGCGAGCCCTTCAAGCTGTAAACTCAGTGGTTGCAAATGGCGGGACCAATATCGCTGAAGGTCTTAGGAAAGGTGTCAAGGTGATGGAAGATCGAAGAGATAAGAATCCCGTTGCTAGCATTATCCTTTTGTCTGATGGACGAGACACCTATACCATGAACCAAGCTGATCCAAACTACAAGTTGTTACTTCCATTGTCTATGCACGGTTGTGAAAGCAAGCGGTTTCAGATCCCGGTTCATTCTTTTGGCTTTGGATCAGATCATGATGCTTCACTGATGCATTCTGTTTCTGAAACCTCTGGGGGGACTTTCTCTTTCATTGAGAGTGAATCTGTGATCCAAGATGCTCTTGCTCAGTGCATTGGTGGACTTTTAAGCGTTGCAGTGCAGGAGCTACGGTTAGAAATCGAGGGTATGTGCTCAGATGTTCATCTCAGCTCAATAAAAGCCGGAAGTTACCAGAGCCTTGTTAGTGGTGATGGTAGGTCTGGATGTGTTGATATTGGTGATCTTTACGCTGATGAAGAGCGGGATTTCTTGATATCTGTCAACATCCCTCCTCAAAAAGATGGAAACGAGACACCACTTCTCAAAATGAGATGTGTCTACAAAGATCTTTTGACAAAAGAAATTGTGACGCTTCAAAGTCATATGCTCAAGATTCAAAGACCAGAAACCGTTGGTCAAGAAGTTGTTGTTTCCATCGAAGTGGACAGGCAAAGAAACAGATTTCTAGCTGCGGAGGCAATGGTAAAGGCGAGAGCTTTAGCAGAAAGAGAAGATTTAGCCGCAGGTGTCACTGCCATCCAGAATTTCAGAGTGGCGTTGGCAGAGACAGTCTCAGCGAAATCGGGTGATGGGTTTTGTGTGGCTTTGGACAGAGAGCTAAAGGAAATGCAAGAAAGAATGGCGAGTAGGCATGTCTACGAGGTATCGGGAAGAGCTTACATTCTTTCTGGACTTAGTTCACACTCATGGCAAAGAGCAACATCAAGAGGAGAATCAGGAGATGGTTCAAGCTTTGTCCAAGCTTATTACCAAACTCCATCAATGGTTGAGATGTTACACAGATCTCAGGCTACATCGCATCATCATAGACTCATCCAGCCTTTGTTTGCATCTCAACCAAAGCCAAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VWA Vwaint zf-RING_11 zf-RING_2

Protein Analysis

692

Amino Acids

76.35

Weight (kDa)

8.66

Isoelectric Point (pI)

41.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-rbx1 PF12678 69 - 116 1e-06 RING-H2 zinc finger domain
zf-RING_2 PF13639 71 - 116 3.2e-08 Ring finger domain
zf-RING_11 PF17123 72 - 101 1e-08 RING-like zinc finger
zf-C3HC4 PF00097 72 - 115 1.1e-07 Zinc finger, C3HC4 type (RING finger)
VWA_CoxE PF05762 213 - 367 5.5e-11 VWA domain containing CoxE-like protein
VWA PF00092 253 - 428 1.1e-22 von Willebrand factor type A domain
VWA_3 PF13768 253 - 419 1.4e-18 von Willebrand factor type A domain
VWA_2 PF13519 254 - 359 3e-19 von Willebrand factor type A domain
Vwaint PF14624 599 - 672 4.9e-19 VWA / Hh protein intein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012886)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G38970
fragaria_vesca FvH4_7g19190 FvH4_7g19190
malus_domestica MD01G1107300.v1.1 MD07G1173100.v1.1
pyrus_communis pycom01g13410 pycom07g16770
rosa_chinensis RchiOBHm_Chr1g0363051
rosa_laevigata RLG00000027598
rosa_multiflora Rmu_sc0004472.1_g000004
rosa_roxburghii Rroxscaffold_4G00293520
rosa_rugosa Rorug01G0304000 Rorug01G0304000
rosa_samantha Rh1AG313000 Rh1BG276200 Rh1CG293000 Rh1DG306900
rosa_wichuraiana Rw1G027730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 417
AarI CACCTGC 1 cut(s) 1721
AasI GACNNNNNNGTC 1 cut(s) 919
Acc36I ACCTGC 1 cut(s) 1721
AccBSI CCGCTC 1 cut(s) 1468
AccI GTMKAC 2 cut(s) 1545, 1863
AciI CCGC 7 cut(s) 448, 630, 978, 1159, 1468, 1679, 1728
AclWI GGATC 4 cut(s) 1100, 1162, 1201, 1270
AcsI RAATTY 2 cut(s) 94, 1750
AcuI CTGAAG 1 cut(s) 1014
AfaI GTAC 2 cut(s) 56, 636
AfiI CCNNNNNNNGG 1 cut(s) 1242
AflIII ACRYGT 1 cut(s) 212
AgsI TTSAA 8 cut(s) 94, 207, 610, 855, 950, 1583, 1604, 1956
AjuI GAANNNNNNNTTGG 2 cut(s) 17, 49
AleI CACNNNNGTG 1 cut(s) 1146
Alw21I GWGCWC 3 cut(s) 278, 751, 1361
Alw26I GTCTC 5 cut(s) 100, 1074, 1511, 1766, 1783
AlwI GGATC 4 cut(s) 1100, 1162, 1201, 1270
Ama87I CYCGRG 1 cut(s) 744
AoxI GGCC 1 cut(s) 143
ApeKI GCWGC 7 cut(s) 373, 428, 535, 686, 689, 937, 1676
ApoI RAATTY 2 cut(s) 94, 1750
AspS9I GGNCC 1 cut(s) 981
AsuC2I CCSGG 2 cut(s) 338, 1172
AsuHPI GGTGA 5 cut(s) 72, 1030, 1427, 1457, 1805
AsuII TTCGAA 1 cut(s) 308
AsuNHI GCTAGC 1 cut(s) 1052
AvaI CYCGRG 1 cut(s) 744
AvaII GGWCC 1 cut(s) 981
AxyI CCTNAGG 1 cut(s) 621
BanII GRGCYC 2 cut(s) 751, 946
BauI CACGAG 3 cut(s) 462, 542, 639
Bbv12I GWGCWC 3 cut(s) 278, 751, 1361
BbvI GCAGC 7 cut(s) 385, 440, 547, 673, 676, 949, 1663
BceAI ACGGC 2 cut(s) 330, 487
BcgI CGANNNNNNTGC 2 cut(s) 258, 292
BciVI GTATCC 1 cut(s) 750
BcnI CCSGG 2 cut(s) 338, 1172
BcoDI GTCTC 5 cut(s) 100, 1074, 1511, 1766, 1783
BfaI CTAG 7 cut(s) 9, 29, 71, 456, 735, 1053, 1673
BfmI CTRYAG 2 cut(s) 99, 562
BfuAI ACCTGC 1 cut(s) 1721
BfuI GTATCC 1 cut(s) 750
BglII AGATCT 3 cut(s) 458, 1552, 2009
BisI GCNGC 8 cut(s) 374, 429, 536, 687, 690, 938, 1677, 1728
BlsI GCNGC 8 cut(s) 375, 430, 537, 688, 691, 939, 1678, 1729
Bme1390I CCNGG 2 cut(s) 338, 1172
Bme18I GGWCC 1 cut(s) 981
BmeT110I CYCGRG 1 cut(s) 744
BmgT120I GGNCC 1 cut(s) 981
BmiI GGNNCC 2 cut(s) 495, 982
BmrFI CCNGG 2 cut(s) 338, 1172
BmsI GCATC 9 cut(s) 415, 559, 685, 916, 1195, 1206, 1273, 2035, 2066
BmtI GCTAGC 1 cut(s) 1056
BplI GAGNNNNNCTC 2 cut(s) 1763, 1795
BpmI CTGGAG 1 cut(s) 735
Bpu10I CCTNAGC 1 cut(s) 498
Bpu14I TTCGAA 1 cut(s) 308
BpuEI CTTGAG 1 cut(s) 1580
BpuMI CCSGG 2 cut(s) 338, 1172
BsaAI YACGTR 1 cut(s) 54
BsaBI GATNNNNATC 2 cut(s) 1041, 1368
BsaJI CCNNGG 3 cut(s) 693, 847, 2072
BsaXI ACNNNNNCTCC 2 cut(s) 1322, 1352
Bsc4I CCNNNNNNNGG 1 cut(s) 1242
Bse1I ACTGG 4 cut(s) 146, 706, 752, 810
Bse21I CCTNAGG 1 cut(s) 621
Bse3DI GCAATG 3 cut(s) 300, 831, 1692
Bse8I GATNNNNATC 2 cut(s) 1041, 1368
BseDI CCNNGG 3 cut(s) 693, 847, 2072
BseGI GGATG 5 cut(s) 586, 1436, 1491, 1743, 2040
BseJI GATNNNNATC 2 cut(s) 1041, 1368
BseLI CCNNNNNNNGG 1 cut(s) 1242
BseMI GCAATG 3 cut(s) 300, 831, 1692
BseMII CTCAG 8 cut(s) 489, 612, 975, 1307, 1374, 1387, 1794, 2027
BseNI ACTGG 4 cut(s) 146, 706, 752, 810
BseRI GAGGAG 4 cut(s) 31, 261, 1488, 1950
BseXI GCAGC 7 cut(s) 385, 440, 547, 673, 676, 949, 1663
BsgI GTGCAG 2 cut(s) 34, 1346
BshFI GGCC 1 cut(s) 145
BsiHKAI GWGCWC 3 cut(s) 278, 751, 1361
BsiHKCI CYCGRG 1 cut(s) 744
BsiSI CCGG 3 cut(s) 338, 1172, 1389
BslFI GGGAC 2 cut(s) 994, 1258
BslI CCNNNNNNNGG 1 cut(s) 1242
BsmAI GTCTC 5 cut(s) 100, 1074, 1511, 1766, 1783
BsmFI GGGAC 2 cut(s) 994, 1258
BsmI GAATGC 2 cut(s) 280, 1219
BsnI GGCC 1 cut(s) 145
BsoBI CYCGRG 1 cut(s) 744
Bsp119I TTCGAA 1 cut(s) 308
Bsp1286I GDGCHC 4 cut(s) 278, 751, 946, 1361
Bsp19I CCATGG 1 cut(s) 693
BspACI CCGC 7 cut(s) 448, 630, 978, 1159, 1468, 1679, 1728
BspANI GGCC 1 cut(s) 145
BspCNI CTCAG 8 cut(s) 490, 613, 974, 1306, 1373, 1386, 1793, 2026
BspHI TCATGA 1 cut(s) 1201
BspLI GGNNCC 2 cut(s) 495, 982
BspMI ACCTGC 1 cut(s) 1721
BspOI GCTAGC 1 cut(s) 1056
BspPI GGATC 4 cut(s) 1100, 1162, 1201, 1270
BspQI GCTCTTC 3 cut(s) 551, 1458, 1873
BspT104I TTCGAA 1 cut(s) 308
BsrBI CCGCTC 1 cut(s) 1468
BsrDI GCAATG 3 cut(s) 300, 831, 1692
BsrI ACTGG 4 cut(s) 146, 706, 752, 810
BssECI CCNNGG 3 cut(s) 693, 847, 2072
BssSI CACGAG 3 cut(s) 462, 542, 639
BssT1I CCWWGG 3 cut(s) 693, 847, 2072
Bst2BI CACGAG 3 cut(s) 462, 542, 639
Bst4CI ACNGT 7 cut(s) 173, 528, 769, 1145, 1338, 1618, 1777
Bst6I CTCTTC 5 cut(s) 551, 889, 1027, 1458, 1873
BstBAI YACGTR 1 cut(s) 54
BstBI TTCGAA 1 cut(s) 308
BstC8I GCNNGC 4 cut(s) 278, 942, 1054, 1157
BstDSI CCRYGG 1 cut(s) 693
BstF5I GGATG 5 cut(s) 586, 1436, 1491, 1743, 2040
BstMAI GTCTC 5 cut(s) 100, 1074, 1511, 1766, 1783
BstMWI GCNNNNNNNGC 3 cut(s) 342, 950, 1682
BstNSI RCATGY 3 cut(s) 216, 257, 1862
BstSCI CCNGG 2 cut(s) 336, 1170
BstSFI CTRYAG 2 cut(s) 99, 562
BstV1I GCAGC 7 cut(s) 385, 440, 547, 673, 676, 949, 1663
BstX2I RGATCY 4 cut(s) 458, 1167, 1552, 2009
BstXI CCANNNNNNTGG 2 cut(s) 141, 1648
BstYI RGATCY 4 cut(s) 458, 1167, 1552, 2009
Bsu36I CCTNAGG 1 cut(s) 621
BsuI GTATCC 1 cut(s) 750
BsuRI GGCC 1 cut(s) 145
BtgI CCRYGG 1 cut(s) 693
BtgZI GCGATG 1 cut(s) 2007
BtsCI GGATG 5 cut(s) 586, 1436, 1491, 1743, 2040
BtsI GCAGTG 3 cut(s) 295, 1329, 1737
BtsIMutI CAGTG 7 cut(s) 295, 787, 969, 1211, 1301, 1329, 1737
BveI ACCTGC 1 cut(s) 1721
Cac8I GCNNGC 4 cut(s) 278, 942, 1054, 1157
CciI TCATGA 1 cut(s) 1201
Cfr13I GGNCC 1 cut(s) 981
CseI GACGC 1 cut(s) 1585
Csp6I GTAC 2 cut(s) 55, 635
CviAII CATG 9 cut(s) 213, 254, 320, 694, 790, 1093, 1202, 1859, 1914
CviQI GTAC 2 cut(s) 55, 635
DrdI GACNNNNNNGTC 1 cut(s) 919
DseDI GACNNNNNNGTC 1 cut(s) 919
Eam1104I CTCTTC 5 cut(s) 551, 889, 1027, 1458, 1873
EarI CTCTTC 5 cut(s) 551, 889, 1027, 1458, 1873
Ecl136II GAGCTC 1 cut(s) 749
Eco130I CCWWGG 3 cut(s) 693, 847, 2072
Eco24I GRGCYC 2 cut(s) 751, 946
Eco32I GATATC 2 cut(s) 732, 1482
Eco47I GGWCC 1 cut(s) 981
Eco53kI GAGCTC 1 cut(s) 749
Eco57I CTGAAG 1 cut(s) 1014
Eco81I CCTNAGG 1 cut(s) 621
Eco88I CYCGRG 1 cut(s) 744
EcoICRI GAGCTC 1 cut(s) 749
EcoRI GAATTC 1 cut(s) 94
EcoRV GATATC 2 cut(s) 732, 1482
EcoT14I CCWWGG 3 cut(s) 693, 847, 2072
EcoT22I ATGCAT 1 cut(s) 1221
EcoT38I GRGCYC 2 cut(s) 751, 946
ErhI CCWWGG 3 cut(s) 693, 847, 2072
FaeI CATG 9 cut(s) 216, 257, 323, 697, 793, 1096, 1205, 1862, 1917
FalI AAGNNNNNCTT 2 cut(s) 1272, 1304
FaqI GGGAC 2 cut(s) 994, 1258
FatI CATG 9 cut(s) 212, 253, 319, 693, 789, 1092, 1201, 1858, 1913
FauI CCCGC 2 cut(s) 971, 1461
FauNDI CATATG 1 cut(s) 1590
FblI GTMKAC 2 cut(s) 1545, 1863
Fnu4HI GCNGC 8 cut(s) 374, 429, 536, 687, 690, 938, 1677, 1728
FokI GGATG 5 cut(s) 573, 1443, 1478, 1730, 2027
FriOI GRGCYC 2 cut(s) 751, 946
Fsp4HI GCNGC 8 cut(s) 374, 429, 536, 687, 690, 938, 1677, 1728
FspBI CTAG 7 cut(s) 9, 29, 71, 456, 735, 1053, 1673
GluI GCNGC 8 cut(s) 374, 429, 536, 687, 690, 938, 1677, 1728
GsuI CTGGAG 1 cut(s) 735
HaeIII GGCC 1 cut(s) 145
HapII CCGG 3 cut(s) 338, 1172, 1389
HgaI GACGC 1 cut(s) 1585
Hin1II CATG 9 cut(s) 216, 257, 323, 697, 793, 1096, 1205, 1862, 1917
HincII GTYRAC 1 cut(s) 1489
HindII GTYRAC 1 cut(s) 1489
HindIII AAGCTT 2 cut(s) 1957, 1968
HpaII CCGG 3 cut(s) 338, 1172, 1389
HphI GGTGA 5 cut(s) 72, 1030, 1427, 1457, 1805
Hpy166II GTNNAC 8 cut(s) 445, 958, 1307, 1489, 1546, 1651, 1864, 1907
Hpy8I GTNNAC 8 cut(s) 445, 958, 1307, 1489, 1546, 1651, 1864, 1907
Hpy99I CGWCG 1 cut(s) 900
HpyAV CCTTC 5 cut(s) 171, 236, 352, 956, 989
HpyCH4III ACNGT 7 cut(s) 173, 528, 769, 1145, 1338, 1618, 1777
HpyCH4IV ACGT 1 cut(s) 53
HpyF10VI GCNNNNNNNGC 3 cut(s) 342, 950, 1682
HpySE526I ACGT 1 cut(s) 53
Hsp92II CATG 9 cut(s) 216, 257, 323, 697, 793, 1096, 1205, 1862, 1917
LguI GCTCTTC 3 cut(s) 551, 1458, 1873
LmnI GCTCC 4 cut(s) 499, 754, 786, 1330
Lsp1109I GCAGC 7 cut(s) 385, 440, 547, 673, 676, 949, 1663
LweI GCATC 9 cut(s) 415, 559, 685, 916, 1195, 1206, 1273, 2035, 2066
MaeI CTAG 7 cut(s) 9, 29, 71, 456, 735, 1053, 1673
MaeII ACGT 1 cut(s) 53
MaeIII GTNAC 7 cut(s) 697, 763, 1122, 1394, 1573, 1735, 2001
MbiI CCGCTC 1 cut(s) 1468
MflI RGATCY 4 cut(s) 458, 1167, 1552, 2009
MhlI GDGCHC 4 cut(s) 278, 751, 946, 1361
MluCI AATT 4 cut(s) 94, 179, 1569, 1750
MlyI GAGTC 3 cut(s) 145, 641, 2031
MmeI TCCRAC 1 cut(s) 179
Mph1103I ATGCAT 1 cut(s) 1221
MseI TTAA 3 cut(s) 138, 227, 1313
MslI CAYNNNNRTG 3 cut(s) 1146, 1646, 1912
MspA1I CMGCKG 1 cut(s) 632
MspI CCGG 3 cut(s) 338, 1172, 1389
MspR9I CCNGG 2 cut(s) 338, 1172
Mva1269I GAATGC 2 cut(s) 280, 1219
MwoI GCNNNNNNNGC 3 cut(s) 342, 950, 1682
NciI CCSGG 2 cut(s) 338, 1172
NcoI CCATGG 1 cut(s) 693
NdeI CATATG 1 cut(s) 1590
NheI GCTAGC 1 cut(s) 1052
NlaIII CATG 9 cut(s) 216, 257, 323, 697, 793, 1096, 1205, 1862, 1917
NlaIV GGNNCC 2 cut(s) 495, 982
NmuCI GTSAC 3 cut(s) 763, 1573, 1735
NsiI ATGCAT 1 cut(s) 1221
NspI RCATGY 3 cut(s) 216, 257, 1862
NspV TTCGAA 1 cut(s) 308
OliI CACNNNNGTG 1 cut(s) 1146
PaeR7I CTCGAG 1 cut(s) 744
PagI TCATGA 1 cut(s) 1201
PaqCI CACCTGC 1 cut(s) 1721
PciI ACATGT 1 cut(s) 212
PciSI GCTCTTC 3 cut(s) 551, 1458, 1873
PctI GAATGC 2 cut(s) 280, 1219
PfeI GAWTC 7 cut(s) 77, 475, 838, 1042, 1268, 1600, 1940
PflFI GACNNNGTC 1 cut(s) 486
PkrI GCNGC 8 cut(s) 375, 430, 537, 688, 691, 939, 1678, 1729
PleI GAGTC 3 cut(s) 145, 641, 2031
PpsI GAGTC 3 cut(s) 145, 641, 2031
Ppu21I YACGTR 1 cut(s) 54
PscI ACATGT 1 cut(s) 212
PsiI TTATAA 1 cut(s) 417
Psp124BI GAGCTC 1 cut(s) 751
PspN4I GGNNCC 2 cut(s) 495, 982
PspPI GGNCC 1 cut(s) 981
PspXI VCTCGAGB 1 cut(s) 744
PsuI RGATCY 4 cut(s) 458, 1167, 1552, 2009
PsyI GACNNNGTC 1 cut(s) 486
RsaI GTAC 2 cut(s) 56, 636
RsaNI GTAC 2 cut(s) 55, 635
RseI CAYNNNNRTG 3 cut(s) 1146, 1646, 1912
SacI GAGCTC 1 cut(s) 751
SapI GCTCTTC 3 cut(s) 551, 1458, 1873
SaqAI TTAA 3 cut(s) 138, 227, 1313
SatI GCNGC 8 cut(s) 374, 429, 536, 687, 690, 938, 1677, 1728
Sau96I GGNCC 1 cut(s) 981
SchI GAGTC 3 cut(s) 145, 641, 2031
ScrFI CCNGG 2 cut(s) 338, 1172
SduI GDGCHC 4 cut(s) 278, 751, 946, 1361
SfaNI GCATC 9 cut(s) 415, 559, 685, 916, 1195, 1206, 1273, 2035, 2066
SfcI CTRYAG 2 cut(s) 99, 562
Sfr274I CTCGAG 1 cut(s) 744
SfuI TTCGAA 1 cut(s) 308
SinI GGWCC 1 cut(s) 981
SlaI CTCGAG 1 cut(s) 744
SmiMI CAYNNNNRTG 3 cut(s) 1146, 1646, 1912
SmlI CTYRAG 2 cut(s) 744, 1595
SmoI CTYRAG 2 cut(s) 744, 1595
Sse9I AATT 4 cut(s) 94, 179, 1569, 1750
SsiI CCGC 7 cut(s) 448, 630, 978, 1159, 1468, 1679, 1728
SspMI CTAG 7 cut(s) 9, 29, 71, 456, 735, 1053, 1673
SstI GAGCTC 1 cut(s) 751
StyD4I CCNGG 2 cut(s) 336, 1170
StyI CCWWGG 3 cut(s) 693, 847, 2072
TaaI ACNGT 7 cut(s) 173, 528, 769, 1145, 1338, 1618, 1777
TaiI ACGT 1 cut(s) 56
TaqI TCGA 5 cut(s) 308, 745, 1030, 1347, 1644
TaqII GACCGA 1 cut(s) 399
TasI AATT 4 cut(s) 94, 179, 1569, 1750
TauI GCSGC 1 cut(s) 1730
TfiI GAWTC 7 cut(s) 77, 475, 838, 1042, 1268, 1600, 1940
Tru1I TTAA 3 cut(s) 138, 227, 1313
Tru9I TTAA 3 cut(s) 138, 227, 1313
TscAI CASTG 7 cut(s) 302, 787, 969, 1218, 1301, 1329, 1744
TseFI GTSAC 3 cut(s) 763, 1573, 1735
TseI GCWGC 7 cut(s) 373, 428, 535, 686, 689, 937, 1676
Tsp45I GTSAC 3 cut(s) 763, 1573, 1735
TspRI CASTG 7 cut(s) 302, 787, 969, 1218, 1301, 1329, 1744
Tth111I GACNNNGTC 1 cut(s) 486
VpaK11BI GGWCC 1 cut(s) 981
XapI RAATTY 2 cut(s) 94, 1750
XbaI TCTAGA 1 cut(s) 70
XceI RCATGY 3 cut(s) 216, 257, 1862
XhoI CTCGAG 1 cut(s) 744
XmiI GTMKAC 2 cut(s) 1545, 1863
XspI CTAG 7 cut(s) 9, 29, 71, 456, 735, 1053, 1673
Zsp2I ATGCAT 1 cut(s) 1221
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.